Aspergillus Systematics in the Genomic Era

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Publisher :
ISBN 13 :
Total Pages : 224 pages
Book Rating : 4.3/5 (91 download)

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Book Synopsis Aspergillus Systematics in the Genomic Era by : Robert A. Samson

Download or read book Aspergillus Systematics in the Genomic Era written by Robert A. Samson and published by . This book was released on 2007 with total page 224 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Aspergillus in the genomic era

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Publisher : BRILL
ISBN 13 : 9086866352
Total Pages : 334 pages
Book Rating : 4.0/5 (868 download)

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Book Synopsis Aspergillus in the genomic era by : János Varga

Download or read book Aspergillus in the genomic era written by János Varga and published by BRILL. This book was released on 2023-08-28 with total page 334 pages. Available in PDF, EPUB and Kindle. Book excerpt: Aspergillus is among the economically most important fungal genera. Aspergillus species are used in the fermentation industry for the production of various enzymes, organic acids and pharmaceutically important compounds, and in Oriental food fermentations. At the same time, Aspergilli can cause opportunistic infections, and produce a range of secondary metabolites also known as mycotoxins which are harmful to humans and animals. Due to its importance in biotechnology, medicine and foods, Aspergilli are in the forefront of studies dealing with various aspects of fungi. This is well illustrated by the fact that projects aiming at sequencing the genomes of nine species are in progress. In this book, some aspects of the biology of this genus are covered, including the biotechnological importance of Aspergilli, their role in mycotoxin contamination of food products including grapes and coffee products, and implications of biodiversity of Aspergillus populations for agriculture. Among the clinical aspects, the role of Aspergilli in eye infections, the mechanisms of antifungal drug resistance and their molecular identification in the clinical setting are covered. Several chapters deal with the genomic aspects of Aspergilli, including the genomics of pigment biosynthesis, extracellular enzyme production, aflatoxin biosynthesis and the identification of genes taking part in sexual processes. Additional chapters cover the variability and inheritance of mycoviruses in Aspergilli and multilocus approaches are given to clarify the evolutionary history of the genus. Finally, a new taxonomic classification of the various Aspergillus sections is given based on multilocus sequence data.

Aspergillus and Penicillium in the Post-genomic Era

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Publisher : Caister Academic Press Limited
ISBN 13 : 9781910190395
Total Pages : 0 pages
Book Rating : 4.1/5 (93 download)

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Book Synopsis Aspergillus and Penicillium in the Post-genomic Era by : Ronald P. de Vries

Download or read book Aspergillus and Penicillium in the Post-genomic Era written by Ronald P. de Vries and published by Caister Academic Press Limited. This book was released on 2016 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Genome sequencing has affected studies into the biology of all classes of organisms and this is certainly true for filamentous fungi. The level with which biological systems can be studied since the availability of genomes and post-genomic technologies is beyond what most people could have imagined previously. The fungal genera Aspergillus and Penicillium contain some species that are amongst the most widely used industrial microorganisms and others that are serious pathogens of plants, animals and humans. These genera are also at the forefront of fungal genomics with many genome sequences available and a whole genus genome sequencing project in progress for Aspergillus. This book highlights some of the changes in the studies into these fungi, since the availability of genome sequences. The contributions vary from insights in the taxonomy of these genera, use of genomics for forward genetics and genomic adaptations, to specific stories addressing virulence, carbon starvation, sulphur metabolism, feruloyl esterases, secondary metabolism and pH modulation, to the development of novel methodology for use in parallel to genome sequencing. It therefore provides a taste of the current status of research in Penicillium and Aspergillus and a promise of many more things to come. An essential reference for everyone working with Aspergillus and Penicillium and other filamentous fungi and the book is also recommended reading for everyone with an interest in fungal genomics.

The Aspergilli

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Publisher : CRC Press
ISBN 13 : 9780849390807
Total Pages : 576 pages
Book Rating : 4.3/5 (98 download)

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Book Synopsis The Aspergilli by : Gustavo H. Goldman

Download or read book The Aspergilli written by Gustavo H. Goldman and published by CRC Press. This book was released on 2007-12-07 with total page 576 pages. Available in PDF, EPUB and Kindle. Book excerpt: With high-quality genome sequences for the important and ubiquitous Aspergilli now available, increased opportunities arise for the further understanding of its gene function, interaction, expression, and evolution. The Aspergilli: Genomics, Medical Aspects, Biotechnology, and Research Methods provides a comprehensive analysis of the research that reveals the main biological attributes of these species. The co-editors are a particularly proficient and prolific pair with long track records of scientific productivity. The book sets the stage with a discussion of basic biology, examining the data on the structure of genomes and comparing the genetic map and annotation methodology. It includes a comparison of metabolic abilities among different Aspergillus spp. and other species, then covers areas such as comparative biology, pathogenic properties, and metabolic capabilities of the Aspergilli. The book reviews established techniques and new methodologies for the post-genomic era in Aspergillus spp. It comes with a CD containing color illustrations to supplement the text. Filling the need for centralized information on a genus that has important economic impacts on agriculture, human health, industry, and pharmacology, the book presents a wide range of data, collected and arranged into one convenient resource. Written by a team of international experts, this is the first in-depth and exhaustive analysis of the genomics of the Aspergilli.

Genomics of Soil- and Plant-Associated Fungi

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Publisher : Springer Science & Business Media
ISBN 13 : 364239339X
Total Pages : 388 pages
Book Rating : 4.6/5 (423 download)

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Book Synopsis Genomics of Soil- and Plant-Associated Fungi by : Benjamin A. Horwitz

Download or read book Genomics of Soil- and Plant-Associated Fungi written by Benjamin A. Horwitz and published by Springer Science & Business Media. This book was released on 2013-08-30 with total page 388 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume addresses the similarities and also the differences in the genomes of soil saprophytes, symbionts, and plant pathogens by using examples of fungal species to illustrate particular principles. It analyzes how the specific interactions with the hosts and the influence of the environment may have shaped genome evolution. The relevance of fungal genetic research and biotechnological applications is shown for areas such as plant pathogenesis, biomass degradation, litter decomposition, nitrogen assimilation, antibiotic production, mycoparasitism, energy, ecology, and also for soil fungi turning to human pathogens. In addition to the model organisms Neurospora and Aspergillus, the following species are covered providing a view of pathogens and mutualists: Trichoderma, Fusarium oxysporum, Cochliobolus heterostrophus, Penicillium chrysogenum, Rhizopus oryzae, Podospora anserina, and species belonging to Agaricomycetes, Archaeorhizomycetes and Magnaporthaceae. Ecology and potential applications have guided the choice of fungal genes to be studied and it will be fascinating to follow the trends of future sequencing projects.

Systems Biotechnology of Recombinant Protein Production in Aspergillus niger

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Publisher : Cuvillier Verlag
ISBN 13 : 373693808X
Total Pages : 192 pages
Book Rating : 4.7/5 (369 download)

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Book Synopsis Systems Biotechnology of Recombinant Protein Production in Aspergillus niger by : Habib Driouch

Download or read book Systems Biotechnology of Recombinant Protein Production in Aspergillus niger written by Habib Driouch and published by Cuvillier Verlag. This book was released on 2011-07-11 with total page 192 pages. Available in PDF, EPUB and Kindle. Book excerpt: The filamentous fungus Aspergillus niger is an important efficient microbial cell factory for industrial production of enzymes as well as organic acids or antibiotics. In submerged cultivation, A. niger exhibits a rather complex morphology which typically has a strong influence on production performance. Although difficult to control so far, the morphological shape is obviously linked to key production characteristics of fungal cell factories. In this regard, comprehensive approaches, combining systems wide analysis and optimization at the cellular level with process driven engineering of the bioreactor environment, seem most useful in order to achieve superior production processes. This was applied to recombinant proteins production in A. niger. The optimization included the use of talc or alumina micro particles, added to the culture, which allowed to the precise controlling the morphological shape of A. niger and increase enzyme production in different recombinant strains. Additionally, the targeted engineering of the morphology of A. niger into high-producing bio-pellet forms of various sizes by the addition of titanate micro particles was demonstrated. This strategy was combined with model-based medium design and development of efficient fed-batch strategies to optimize the production of the high-value enzyme fructofuranosidase, an important biocatalyst for neo-sugar in food or pharmaceutical industry, in the recombinant strain A. niger SKAn1015. As a result, the achieved enzyme titre could be increased to 2,800 U/mL, more than tenfold as compared to previously described processes. The enzyme, obtained by this micro particle enhanced process, could be applied as biocatalyst with minimal pre-treatment for the biosynthesis of 450 g/L of neo-sugar of the inulin type, such as 1 kestose and 1 nystose, which all display pre-biotics with substantial commercial interest. These studies were complementary by systems biotechnology analysis of A. niger as it is expected that this may lead to increased understanding of the context of cellular metabolism, regulation and thus further improvement of strains and processes. Fluxome analyses by 13C isotope studies and in silico design are applied to quantify the underlying carbon core metabolism of A. niger under different conditions. This yielding valuable insights towards the tailor made design of A. niger as a cell factory for recombinant protein production.

Microbial Diversity in the Genomic Era

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Publisher : Elsevier
ISBN 13 : 0443133212
Total Pages : 840 pages
Book Rating : 4.4/5 (431 download)

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Book Synopsis Microbial Diversity in the Genomic Era by : Surajit Das

Download or read book Microbial Diversity in the Genomic Era written by Surajit Das and published by Elsevier. This book was released on 2024-03-23 with total page 840 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microbial Diversity in the Genomic Era, Second Edition presents techniques used for microbial taxonomy and phylogeny, along with their applications and respective strengths and challenges. Though many advanced techniques for the identification of unknown bacterium are available in the genomic era, a far fewer number of the total microbial species have been discovered and identified to date. With that in mind, this book incorporates recently developed biosystematics methods and approaches to assess microbial taxonomy, with suitable recommendations for where to apply them across the range of bacterial identification and infectious disease research. Here, international researchers in the field first provide a broad overview of microbial genomics research and microbiome directed medicine, followed by sections on molecular tools for microbial diversity research, extremophilic microbial diversity, functional microbial diversity across application areas, microbial diversity and infectious disease research, and future directions for research. Step-by-step methodologies are provided for key techniques, along with applied case studies breaking down recent research studies into the practical components, illuminating pathways for new studies across the field. This new edition has been fully updated to address advances in the field of microbiome directed medicine, and whole genome sequencing for studying microbial diversity, considering both recent technological advances and new applications areas, from extremophile studies to the latest approaches in human microbiome analysis. Instructs in techniques used for microbial taxonomy and phylogeny, with discussions of their applications and respective pros and cons Reviews the evolving field of microbial typing and the genomic technologies that enable comparative metagenomic analysis of complex microbial environments Covers microbiome directed translational research, as well as whole genome sequencing for studying microbial diversity, with newly added research protocols and case studies Reviews future applications in the field of microbiome directed medicine Features chapter contributions from global experts in the field

Plant Disease Management in the Post-Genomic Era: From Functional Genomics to Genome Editing

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Publisher : Frontiers Media SA
ISBN 13 : 2889635600
Total Pages : 205 pages
Book Rating : 4.8/5 (896 download)

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Book Synopsis Plant Disease Management in the Post-Genomic Era: From Functional Genomics to Genome Editing by : Sabrina Sarrocco

Download or read book Plant Disease Management in the Post-Genomic Era: From Functional Genomics to Genome Editing written by Sabrina Sarrocco and published by Frontiers Media SA. This book was released on 2020-03-16 with total page 205 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Encyclopedia of Microbiology

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Publisher : Academic Press
ISBN 13 : 0128117370
Total Pages : 3248 pages
Book Rating : 4.1/5 (281 download)

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Book Synopsis Encyclopedia of Microbiology by : Thomas M. Schmidt

Download or read book Encyclopedia of Microbiology written by Thomas M. Schmidt and published by Academic Press. This book was released on 2019-09-11 with total page 3248 pages. Available in PDF, EPUB and Kindle. Book excerpt: Encyclopedia of Microbiology, Fourth Edition, Five Volume Set gathers both basic and applied dimensions in this dynamic field that includes virtually all environments on Earth. This range attracts a growing number of cross-disciplinary studies, which the encyclopedia makes available to readers from diverse educational backgrounds. The new edition builds on the solid foundation established in earlier versions, adding new material that reflects recent advances in the field. New focus areas include `Animal and Plant Microbiomes’ and ‘Global Impact of Microbes`. The thematic organization of the work allows users to focus on specific areas, e.g., for didactical purposes, while also browsing for topics in different areas. Offers an up-to-date and authoritative resource that covers the entire field of microbiology, from basic principles, to applied technologies Provides an organic overview that is useful to academic teachers and scientists from different backgrounds Includes chapters that are enriched with figures and graphs, and that can be easily consulted in isolation to find fundamental definitions and concepts

Eukaryotic Microbes

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Publisher : Academic Press
ISBN 13 : 0123838762
Total Pages : 496 pages
Book Rating : 4.1/5 (238 download)

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Book Synopsis Eukaryotic Microbes by : Moselio Schaechter

Download or read book Eukaryotic Microbes written by Moselio Schaechter and published by Academic Press. This book was released on 2012 with total page 496 pages. Available in PDF, EPUB and Kindle. Book excerpt: Eukaryotic Microbes presents chapters hand-selected by the editor of the Encyclopedia of Microbiology, updated whenever possible by their original authors to include key developments made since their initial publication. The book provides an overview of the main groups of eukaryotic microbes and presents classic and cutting-edge research on content relating to fungi and protists, including chapters on yeasts, algal blooms, lichens, and intestinal protozoa. This concise and affordable book is an essential reference for students and researchers in microbiology, mycology, immunology, environmental sciences, and biotechnology. Written by recognized authorities in the field Includes all major groups of eukaryotic microbes, including protists, fungi, and microalgae Covers material pertinent to a wide range of students, researchers, and technicians in the field

Advances in Applied Microbiology

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Publisher : Gulf Professional Publishing
ISBN 13 : 9780120026609
Total Pages : 310 pages
Book Rating : 4.0/5 (266 download)

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Book Synopsis Advances in Applied Microbiology by : Allen I. Laskin

Download or read book Advances in Applied Microbiology written by Allen I. Laskin and published by Gulf Professional Publishing. This book was released on 2005-12-06 with total page 310 pages. Available in PDF, EPUB and Kindle. Book excerpt: Published since 1959, Advances in Applied Microbiology continues to be one of the most widely read and authoritative review sources in Microbiology.The series contains comprehensive reviews of the most current research in applied microbiology. Recent areas covered include bacterial diversity in the human gut, protozoan grazing of freshwater biofilms, metals in yeast fermentation processes and the interpretation of host-pathogen dialogue through microarrays.Impact factor for 2003: 1.893

Physiology and Genetics

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Publisher : Springer Science & Business Media
ISBN 13 : 3642002862
Total Pages : 419 pages
Book Rating : 4.6/5 (42 download)

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Book Synopsis Physiology and Genetics by : Timm Anke

Download or read book Physiology and Genetics written by Timm Anke and published by Springer Science & Business Media. This book was released on 2009-09-18 with total page 419 pages. Available in PDF, EPUB and Kindle. Book excerpt: In the last decade the discipline of mycology has been substantially changed by new research technologies. In particular DNA-based tools for the investigation of fungal taxonomy, signal transduction and regulation, and biosynthetic potential have accelerated advances in mycological knowledge. This volume presents a selection of exciting issues on basic and applied aspects of fungal physiology and genetics. In 18 chapters renowned experts provide an overview of traditional as well as current and future aspects of potential application of fungi in biotechnology. The contributions can be used by scientists to keep up-to-date on the latest developments in the corresponding research area, and by students to familiarize themselves with the different topics.

Encyclopedia of Microbiology

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Publisher : Academic Press
ISBN 13 : 0123739446
Total Pages : 4358 pages
Book Rating : 4.1/5 (237 download)

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Book Synopsis Encyclopedia of Microbiology by :

Download or read book Encyclopedia of Microbiology written by and published by Academic Press. This book was released on 2009-01-14 with total page 4358 pages. Available in PDF, EPUB and Kindle. Book excerpt: Available as an exclusive product with a limited print run, Encyclopedia of Microbiology, 3e, is a comprehensive survey of microbiology, edited by world-class researchers. Each article is written by an expert in that specific domain and includes a glossary, list of abbreviations, defining statement, introduction, further reading and cross-references to other related encyclopedia articles. Written at a level suitable for university undergraduates, the breadth and depth of coverage will appeal beyond undergraduates to professionals and academics in related fields. 16 separate areas of microbiology covered for breadth and depth of content Extensive use of figures, tables, and color illustrations and photographs Language is accessible for undergraduates, depth appropriate for scientists Links to original journal articles via Crossref 30% NEW articles and 4-color throughout – NEW!

Molecular Medicine

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Publisher : BoD – Books on Demand
ISBN 13 : 183962759X
Total Pages : 168 pages
Book Rating : 4.8/5 (396 download)

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Book Synopsis Molecular Medicine by : Sinem Nalbantoglu

Download or read book Molecular Medicine written by Sinem Nalbantoglu and published by BoD – Books on Demand. This book was released on 2019-11-06 with total page 168 pages. Available in PDF, EPUB and Kindle. Book excerpt: Molecular medicine is an applied science focused on human genes/transcripts, proteins, metabolites, and metabolic networks that describes molecular and cellular processes of health and disease onset and progression. Molecular medicine-based integrative identification and characterization of biomarker targets and their clinical translations is essential to explain/decipher the mechanism(s) underlying physiological pathways and pathological conditions, and acquire cell-targeted early interventional and therapeutic strategies in the context of precision medicine and public health. Principally, Molecular Medicine provides an overview of the latest headlines/developments of systems and molecular medicine, highlighting the emerging high-throughput technologies, promising potential applications, and progress in biomedical research and development strategies.

Host and Pathogen Determinants of Allergic and Invasive Fungal Diseases

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Publisher : Frontiers Media SA
ISBN 13 : 288963809X
Total Pages : 123 pages
Book Rating : 4.8/5 (896 download)

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Book Synopsis Host and Pathogen Determinants of Allergic and Invasive Fungal Diseases by : Stéphane Ranque

Download or read book Host and Pathogen Determinants of Allergic and Invasive Fungal Diseases written by Stéphane Ranque and published by Frontiers Media SA. This book was released on 2020-06-29 with total page 123 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Molecular Markers in Mycology

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Publisher : Springer
ISBN 13 : 3319341065
Total Pages : 370 pages
Book Rating : 4.3/5 (193 download)

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Book Synopsis Molecular Markers in Mycology by : Bhim Pratap Singh

Download or read book Molecular Markers in Mycology written by Bhim Pratap Singh and published by Springer. This book was released on 2017-01-21 with total page 370 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Kingdom fungi encompass a massive diversity of taxa with wide-ranging ecologies, life cycles, and morphologies ranging from unicellular aquatic chytrids to large mushrooms. Before molecular methods came in existence, taxonomists considered this Kingdom to be a member of the plant kingdom due to certain life styles like immobility and growth habitats. Molecular markers (also known as DNA markers), facilitated a better alternative method over traditional morphological methods, employed for the identification, characterization, and to understand the evolution of fungi. The morphological methods used for identification are mainly dependent on spore color or microscopic features whereas molecular markers are based on DNA polymorphism in the genomic organization. Phylogenetic studies reported in last decade, based on molecular markers, have reshaped the classification system of Kingdom fungi, which divided into one subkingdom, seven phyla, and ten subphyla. Recent advances in molecular mycology have opened the way for researchers to identify and characterize novel fungal species from unique environments. Mycology is concerned with the systematic study of fungi, including their genetic and biochemical properties, their use to humans as a source of medicine and food, as well as their dangers, such as poisoning and infections. In the 21st century with the development of DNA sequencing technologies and phylogenetic analysis based on molecular markers, new insights into fungal taxonomy were provided. This book contains a thorough discussion of molecular characterization and detection of different groups of fungi by using PCR-based markers and provides a comprehensive view of the applications and uses of different molecular markers in molecular mycology. It also addresses the recent molecular markers employed to solve the problems of identification and discusses current approaches used in molecular characterization and detection of fungi.

Taxonomy of Mycotoxigenic Fungi

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Publisher : Scientific Publishers
ISBN 13 : 9386102234
Total Pages : 317 pages
Book Rating : 4.3/5 (861 download)

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Book Synopsis Taxonomy of Mycotoxigenic Fungi by : S. Girisham

Download or read book Taxonomy of Mycotoxigenic Fungi written by S. Girisham and published by Scientific Publishers. This book was released on 2017-06-01 with total page 317 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mycotoxins, toxic metabolites of molds elaborated during their colonization of foods and feeds, pose a threat to human and animal life. Molds are the diverse group of fungi, which grow in compatatively dry and warm environments, produce copious amount of spores and promote the elaboration of these mycotoxins. Mycotoxigenic fungi, which are unique their sporulating apparatus and exhibit wide variation in their morphology, poses a challenge in their identification. There are numerous examples of their misidentification leading to wrong conclusions. Precise information on taxonomy of these fungi is lacking. Therefore, this book fulfills the need of providing comprehensive information and keys helpful for the accurate identification of these moulds. The book also provides comprehensive account of morphology, mycotoxins produced and factors leading to the elaboration of mycotoxins. Information on their molecular detection, anamorphic and teleomorphic relationships is also included.