Plant Long Non Coding Rnas

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Long Noncoding RNAs in Plants

Author : Santosh Kumar Upadhyay
Publisher : Academic Press
ISBN 13 : 0128214635
Total Pages : 390 pages
Book Rating : 4.1/5 (282 download)

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Book Synopsis Long Noncoding RNAs in Plants by : Santosh Kumar Upadhyay

Download or read book Long Noncoding RNAs in Plants written by Santosh Kumar Upadhyay and published by Academic Press. This book was released on 2020-11-13 with total page 390 pages. Available in PDF, EPUB and Kindle. Book excerpt: The growth of human population has increased the demand for improved yield and quality of crops and horticultural plants. However, plant productivity continues to be threatened by stresses such as heat, cold, drought, heavy metals, UV radiations, bacterial and fungal pathogens, and insect pests. Long noncoding RNAs are associated with various developmental pathways, regulatory systems, abiotic and biotic stress responses and signaling, and can provide an alternative strategy for stress management in plants. Long Noncoding RNAs in Plants: Roles in development and stress provides the most recent advances in LncRNAs, including identification, characterization, and their potential applications and uses. Introductory chapters include the basic features and brief history of development of lncRNAs studies in plants. The book then provides the knowledge about the lncRNAs in various important agricultural and horticultural crops such as cereals, legumes, fruits, vegetables, and fiber crop cotton, and their roles and applications in abiotic and biotic stress management. Includes the latest advances and research in long noncoding RNAs in plants Provides alternative strategies for abiotic and biotic stress management in horticultural plants and agricultural crops Focuses on the application and uses of long noncoding RNAs

Plant Long Non-Coding RNAs

Author : Julia A. Chekanova
Publisher : Humana Press
ISBN 13 : 9781493990443
Total Pages : 480 pages
Book Rating : 4.9/5 (94 download)

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Book Synopsis Plant Long Non-Coding RNAs by : Julia A. Chekanova

Download or read book Plant Long Non-Coding RNAs written by Julia A. Chekanova and published by Humana Press. This book was released on 2019-04-20 with total page 480 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume focuses on various approaches to studying long non-coding RNAs (lncRNAs), including techniques for finding lncRNAs, localization, and observing their functions. The chapters in this book cover how to catalog lncRNAs in various plant species; determining subcellular localization; protein interactions; structures; and RNA modifications. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Cutting-edge and innovative, Plant Long Non-Coding RNAs: Methods and Protocols is a valuable resource that aids researchers in understanding the functions of lncRNAs in different plant species, and helps them explore currently uncharted facets of plant biology.

Long Non Coding RNA Biology

Author : M.R.S. Rao
Publisher : Springer
ISBN 13 : 9811052034
Total Pages : 323 pages
Book Rating : 4.8/5 (11 download)

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Book Synopsis Long Non Coding RNA Biology by : M.R.S. Rao

Download or read book Long Non Coding RNA Biology written by M.R.S. Rao and published by Springer. This book was released on 2017-08-16 with total page 323 pages. Available in PDF, EPUB and Kindle. Book excerpt: This contributed volume offers a comprehensive and detailed overview of the various aspects of long non-coding RNAs and discusses their emerging significance. Written by leading experts in the field, it motivates young researchers around the globe, and offers graduate and postgraduate students fascinating insights into genes and their regulation in eukaryotes and higher organisms.

Non Coding RNAs in Plants

Author : Volker A. Erdmann
Publisher : Springer Science & Business Media
ISBN 13 : 3642194540
Total Pages : 514 pages
Book Rating : 4.6/5 (421 download)

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Book Synopsis Non Coding RNAs in Plants by : Volker A. Erdmann

Download or read book Non Coding RNAs in Plants written by Volker A. Erdmann and published by Springer Science & Business Media. This book was released on 2011-07-20 with total page 514 pages. Available in PDF, EPUB and Kindle. Book excerpt: In the most recent years, each of the RNA silencing pathways of plants have appeared to generate ncRNAs with dedicated functions, specialized biological activities and specific functional scopes. RNA silencing plays a crucial role in coordinating the expression, stability, protection and inheritance of eukaryotic genomes. It compromises several mechanisms, that invariably depend on core small non coding RNAs and that achieve dedicated sequence-specific functions. RNA silencing has been recognized to carry critical developmental, stress-response and bodyguard functions be coordinating the expression, protection, stability and inheritance of virtually all eukaryotic genomes. Thus, the ncRNAs encompass a wide set of mechanisms that achieve specialized functions.

Regulatory Non-Coding RNAs

Author : Gordon G. Carmichael
Publisher : Humana Press
ISBN 13 : 9781493913688
Total Pages : 0 pages
Book Rating : 4.9/5 (136 download)

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Book Synopsis Regulatory Non-Coding RNAs by : Gordon G. Carmichael

Download or read book Regulatory Non-Coding RNAs written by Gordon G. Carmichael and published by Humana Press. This book was released on 2014-09-20 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Regulatory Non-Coding RNAs: Methods and Protocols offers a collection of methods for those interested in the discovery, localization, and functional analysis of these non-coding transcripts that have the potential and ability to orchestrate and control gene expression. After a review of the field, this detailed volume continues with methods useful for the study of siRNAs, microRNAs and their targets, techniques concerned with long non-coding RNAs, as well as studies of the critical parameters of functional non-coding RNA protein-RNA interactions and the environment in which they act. Written for the highly successful Methods in Molecular Biology series, chapters include brief introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols and tips for troubleshooting and avoiding known pitfalls. Dependable and easy to use, Regulatory Non-Coding RNAs: Methods and Protocols provides a current, state-of-the-art collection of methods and approaches that will be of value to researchers in this expanding and fascinating field.

Non-Coding RNAs

Author : Jan Barciszewski
Publisher : Springer Science & Business Media
ISBN 13 : 9780306478352
Total Pages : 302 pages
Book Rating : 4.4/5 (783 download)

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Book Synopsis Non-Coding RNAs by : Jan Barciszewski

Download or read book Non-Coding RNAs written by Jan Barciszewski and published by Springer Science & Business Media. This book was released on 2003-08-31 with total page 302 pages. Available in PDF, EPUB and Kindle. Book excerpt: General inspection of a role performed in the cell by RNAs allows us to distinguish three major groups of transcripts: I. protein-coding mRNAs, II. non-coding housekeeping and III. regulatory RNAs. The housekeeping RNAs include RNA classes that are generally, constitutively expressed and whose presence is required for normal function and viability of the cells. On the other hand, a group of regulatory RNAs includes RNA species that are expressed at certain stages of organism development or cell differentiation or as a response to external stimuli and can affect expression of other genes on the levels of transcription or translation. Non-coding RNA transcripts form a heterogeneous class of RNAs that can not be characterized by a single specific function. Initially, the term non-coding RNA (ncRNA) was used primarily to describe polyadenylated and a capped eukaryotic RNAs transcribed by RNA polymerase II, but lacking long open reading frames. Now, this definition can be extended to cover all RNA transcripts that do not show protein-coding capacity and is sometimes used to describe any RNA that does not encode protein, including introns. This book is an in-depth look at the function of Non-Coding RNAs and their relationship to Molecular Biology and Molecular Biology.

Advances in Computational and Bio-Engineering

Author : S. Jyothi
Publisher : Springer Nature
ISBN 13 : 3030469395
Total Pages : 650 pages
Book Rating : 4.0/5 (34 download)

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Book Synopsis Advances in Computational and Bio-Engineering by : S. Jyothi

Download or read book Advances in Computational and Bio-Engineering written by S. Jyothi and published by Springer Nature. This book was released on 2020-07-19 with total page 650 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book gathers state-of-the-art research in computational engineering and bioengineering to facilitate knowledge exchange between various scientific communities. Computational engineering (CE) is a relatively new discipline that addresses the development and application of computational models and simulations often coupled with high-performance computing to solve complex physical problems arising in engineering analysis and design in the context of natural phenomena. Bioengineering (BE) is an important aspect of computational biology, which aims to develop and use efficient algorithms, data structures, and visualization and communication tools to model biological systems. Today, engineering approaches are essential for biologists, enabling them to analyse complex physiological processes, as well as for the pharmaceutical industry to support drug discovery and development programmes.

Computational Non-coding RNA Biology

Author : Yun Zheng
Publisher : Academic Press
ISBN 13 : 0128143665
Total Pages : 320 pages
Book Rating : 4.1/5 (281 download)

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Book Synopsis Computational Non-coding RNA Biology by : Yun Zheng

Download or read book Computational Non-coding RNA Biology written by Yun Zheng and published by Academic Press. This book was released on 2018-09-14 with total page 320 pages. Available in PDF, EPUB and Kindle. Book excerpt: Computational Non-coding RNA Biology is a resource for the computation of non-coding RNAs. The book covers computational methods for the identification and quantification of non-coding RNAs, including miRNAs, tasiRNAs, phasiRNAs, lariat originated circRNAs and back-spliced circRNAs, the identification of miRNA/siRNA targets, and the identification of mutations and editing sites in miRNAs. The book introduces basic ideas of computational methods, along with their detailed computational steps, a critical component in the development of high throughput sequencing technologies for identifying different classes of non-coding RNAs and predicting the possible functions of these molecules. Finding, quantifying, and visualizing non-coding RNAs from high throughput sequencing datasets at high volume is complex. Therefore, it is usually possible for biologists to complete all of the necessary steps for analysis. Presents a comprehensive resource of computational methods for the identification and quantification of non-coding RNAs Introduces 23 practical computational pipelines for various topics of non-coding RNAs Provides a guide to assist biologists and other researchers dealing with complex datasets Introduces basic computational methods and provides guidelines for their replication by researchers Offers a solution to researchers approaching large and complex sequencing datasets

Heat Stress Tolerance in Plants

Author : Shabir H. Wani
Publisher : John Wiley & Sons
ISBN 13 : 1119432367
Total Pages : 315 pages
Book Rating : 4.1/5 (194 download)

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Book Synopsis Heat Stress Tolerance in Plants by : Shabir H. Wani

Download or read book Heat Stress Tolerance in Plants written by Shabir H. Wani and published by John Wiley & Sons. This book was released on 2020-04-06 with total page 315 pages. Available in PDF, EPUB and Kindle. Book excerpt: Demystifies the genetic, biochemical, physiological, and molecular mechanisms underlying heat stress tolerance in plants Heat stress—when high temperatures cause irreversible damage to plant function or development—severely impairs the growth and yield of agriculturally important crops. As the global population mounts and temperatures continue to rise, it is crucial to understand the biochemical, physiological, and molecular mechanisms of thermotolerance to develop ‘climate-smart’ crops. Heat Stress Tolerance in Plants provides a holistic, cross-disciplinary survey of the latest science in this important field. Presenting contributions from an international team of plant scientists and researchers, this text examines heat stress, its impact on crop plants, and various mechanisms to modulate tolerance levels. Topics include recent advances in molecular genetic approaches to increasing heat tolerance, the potential role of biochemical and molecular markers in screening germplasm for thermotolerance, and the use of next-generation sequencing to unravel the novel genes associated with defense and metabolite pathways. This insightful book: Places contemporary research on heat stress in plants within the context of global climate change and population growth Includes diverse analyses from physiological, biochemical, molecular, and genetic perspectives Explores various approaches to increasing heat tolerance in crops of high commercial value, such as cotton Discusses the applications of plant genomics in the development of thermotolerant ‘designer crops’ An important contribution to the field, Heat Stress Tolerance in Plants is an invaluable resource for scientists, academics, students, and researchers working in fields of pulse crop biochemistry, physiology, genetics, breeding, and biotechnology.

Non-Coding RNAs

Author : Penna Suprasanna
Publisher : CRC Press
ISBN 13 : 1000993132
Total Pages : 401 pages
Book Rating : 4.0/5 (9 download)

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Book Synopsis Non-Coding RNAs by : Penna Suprasanna

Download or read book Non-Coding RNAs written by Penna Suprasanna and published by CRC Press. This book was released on 2023-12-29 with total page 401 pages. Available in PDF, EPUB and Kindle. Book excerpt: This reference book compiles updated research on non-coding RNAs and their role in producing high-yielding plants with higher productivity under changing climates. Plant non-coding RNAs are emerging as the key regulators of plant responses to climate change and environmental stresses. The book covers the sequencing, identification, prediction, identification, characterization, and targets of non-coding RNAs to engineer high-yielding crops. It also includes in silico tools and databases to study them. Key features: Discusses the different types of non-coding RNAs including lnc-RNAs, siRNA, microRNAs, and tasiRNAs. Covers the role of plant non-coding RNAs in epigenetic regulation of environmental stress response and tolerance. Reviews the role of non-coding RNAs under environmental stresses like drought, water logging, salinity, extreme temperature, UV, heavy metals, and xenobiotics. Explores the use of non-coding RNAs in transgenic crops and genome editing. Describes the biogenesis, history, and classification of non-coding RNAs in plants. The book provides a mix of basic and advanced information for postgraduate students, researchers, and scientists in the fields of plant molecular biology, biotechnology, food security, and agriculture.

Plant Stress Tolerance

Author : Ramanjulu Sunkar
Publisher : Humana
ISBN 13 : 9781071639726
Total Pages : 0 pages
Book Rating : 4.6/5 (397 download)

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Book Synopsis Plant Stress Tolerance by : Ramanjulu Sunkar

Download or read book Plant Stress Tolerance written by Ramanjulu Sunkar and published by Humana. This book was released on 2024-07-30 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This fully updated new edition explores new techniques for studying plant stress. This includes novel methodologies such as MeRIP-seq for identifying changes in m6A profiles, isolation of stress granules, and additional methodologies such as MNase–seq for identifying nucleosome occupancy, alternative splicing analysis, identifying proteins that interact with long noncoding RNAs, untargeted metabolomics, ROS and NO measurements, priming-related protocols, growth-promoting bacteria isolation and functional characterization, as well as isolating mutants for stress-regulated genes using CRISPR technology. Written for the highly successful Methods in Molecular Biology series, chapters feature introductions to their respective topics, lists of the necessary materials and reagents, step-by-step and readily reproducible protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and up-to-date, Plant Stress Tolerance: Methods and Protocols, Third Edition provides a wide range of protocols catering to the needs of plant physiologists, biochemists, and molecular biologists interested in probing this vital area of study.

Non-coding RNAs

Author : Lutfi Tutar
Publisher :
ISBN 13 : 9781789857085
Total Pages : pages
Book Rating : 4.8/5 (57 download)

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Book Synopsis Non-coding RNAs by : Lutfi Tutar

Download or read book Non-coding RNAs written by Lutfi Tutar and published by . This book was released on 2020 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:

From Plant Genomics to Plant Biotechnology

Author : Palmiro Poltronieri
Publisher : Elsevier
ISBN 13 : 1908818476
Total Pages : 275 pages
Book Rating : 4.9/5 (88 download)

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Book Synopsis From Plant Genomics to Plant Biotechnology by : Palmiro Poltronieri

Download or read book From Plant Genomics to Plant Biotechnology written by Palmiro Poltronieri and published by Elsevier. This book was released on 2013-08-31 with total page 275 pages. Available in PDF, EPUB and Kindle. Book excerpt: With the appearance of methods for the sequencing of genomes and less expensive next generation sequencing methods, we face rapid advancements of the -omics technologies and plant biology studies: reverse and forward genetics, functional genomics, transcriptomics, proteomics, metabolomics, the movement at distance of effectors and structural biology. From plant genomics to plant biotechnology reviews the recent advancements in the post-genomic era, discussing how different varieties respond to abiotic and biotic stresses, understanding the epigenetic control and epigenetic memory, the roles of non-coding RNAs, applicative uses of RNA silencing and RNA interference in plant physiology and in experimental transgenics and plants modified to specific aims. In the forthcoming years these advancements will support the production of plant varieties better suited to resist biotic and abiotic stresses, for food and non-food applications. This book covers these issues, showing how such technologies are influencing the plant field in sectors such as the selection of plant varieties and plant breeding, selection of optimum agronomic traits, stress-resistant varieties, improvement of plant fitness, improving crop yield, and non-food applications in the knowledge based bio-economy. Discusses a broad range of applications: the examples originate from a variety of sectors (including in field studies, breeding, RNA regulation, pharmaceuticals and biotech) and a variety of scientific areas (such as bioinformatics, -omics sciences, epigenetics, and the agro-industry) Provides a unique perspective on work normally performed 'behind closed doors'. As such, it presents an opportunity for those within the field to learn from each other, and for those on the 'outside' to see how different groups have approached key problems Highlights the criteria used to compare and assess different approaches to solving problems. Shows the thinking process, practical limitations and any other considerations, aiding in the understanding of a deeper approach

Plant Genetics and Molecular Biology

Author : Rajeev K. Varshney
Publisher : Springer
ISBN 13 : 3319913131
Total Pages : 298 pages
Book Rating : 4.3/5 (199 download)

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Book Synopsis Plant Genetics and Molecular Biology by : Rajeev K. Varshney

Download or read book Plant Genetics and Molecular Biology written by Rajeev K. Varshney and published by Springer. This book was released on 2018-09-04 with total page 298 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book reviews the latest advances in multiple fields of plant biotechnology and the opportunities that plant genetics, genomics and molecular biology have offered for agriculture improvement. Advanced technologies can dramatically enhance our capacity in understanding the molecular basis of traits and utilizing the available resources for accelerated development of high yielding, nutritious, input-use efficient and climate-smart crop varieties. In this book, readers will discover the significant advances in plant genetics, structural and functional genomics, trait and gene discovery, transcriptomics, proteomics, metabolomics, epigenomics, nanotechnology and analytical & decision support tools in breeding. This book appeals to researchers, academics and other stakeholders of global agriculture.

Codon Evolution

Author : Gina M. Cannarozzi
Publisher : Oxford University Press
ISBN 13 : 019960116X
Total Pages : 297 pages
Book Rating : 4.1/5 (996 download)

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Book Synopsis Codon Evolution by : Gina M. Cannarozzi

Download or read book Codon Evolution written by Gina M. Cannarozzi and published by Oxford University Press. This book was released on 2012-02-23 with total page 297 pages. Available in PDF, EPUB and Kindle. Book excerpt: The second part of the book focuses on codon usage bias.

Functional analysis of species-specific noncoding RNAs in plants

Author : Yuepeng Song
Publisher : Frontiers Media SA
ISBN 13 : 283251331X
Total Pages : 201 pages
Book Rating : 4.8/5 (325 download)

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Book Synopsis Functional analysis of species-specific noncoding RNAs in plants by : Yuepeng Song

Download or read book Functional analysis of species-specific noncoding RNAs in plants written by Yuepeng Song and published by Frontiers Media SA. This book was released on 2023-02-01 with total page 201 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Plant RNA Biology

Author : Dóra Szakonyi
Publisher : Frontiers Media SA
ISBN 13 : 2889630250
Total Pages : 167 pages
Book Rating : 4.8/5 (896 download)

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Book Synopsis Plant RNA Biology by : Dóra Szakonyi

Download or read book Plant RNA Biology written by Dóra Szakonyi and published by Frontiers Media SA. This book was released on 2019-11-18 with total page 167 pages. Available in PDF, EPUB and Kindle. Book excerpt: Discoveries from the past decades revealed that RNA molecules are much more than inert intermediates between the coding DNA sequences and their functional products, proteins. Today, RNAs are recognized as active regulatory molecules influencing gene expression, chromatin organization and genome stability, thus impacting all aspects of plant life including development, growth, reproduction and stress tolerance. Innovations in methodologies, the expanding application of next-generation sequencing technologies, and the creation of public datasets and databases have exposed a new universe of RNA-based mechanisms and led to the discovery of new families of non-coding RNAs, uncovered the large extent of alternative splicing events, and highlighted the potential roles of RNA modifications and RNA secondary structures. Furthermore, considerable advances have been made in identifying RNA-binding and processing factors involved in the synthesis and maturation of different forms of RNA molecules as well as in RNA processing, biochemical modifications or degradation. This Research Topic showcases the broad biological significance of RNAs in plant systems and contains eight original research articles, one review and four mini-reviews, covering various RNA-based mechanisms in higher plants. Emerging new technologies and novel multidisciplinary approaches are empowering the scientific community and will expectedly bring novel insights into our understanding of the mechanisms through which RNA is regulated and regulates biological processes in plant cells.