Data Dimensionality Reduction Techniques: what Works with Machine Learning Models

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ISBN 13 :
Total Pages : 0 pages
Book Rating : 4.:/5 (139 download)

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Book Synopsis Data Dimensionality Reduction Techniques: what Works with Machine Learning Models by : Yuting Chen

Download or read book Data Dimensionality Reduction Techniques: what Works with Machine Learning Models written by Yuting Chen and published by . This book was released on 2022 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: High-dimensional data has a wide range of applications in research, such as education, health, social media, and many other research fields. However, the high dimensionality of data can raise many problems for data analyses. This study focuses on commonly used techniques of dimensionality reduction for machine learning models, which play an essential and inevitable role in data prepossessing and statistical analysis. The main issues of high-dimensional data for machine learning tasks include the accuracy of data classification and visualization in machine learning models. Therefore, in this study, machine learning algorithms are used to predict and classify datasets to evaluate the accuracy, precision, recall, and F1 score of results, which are evaluated and compared by mean, variance, confidence intervals, and coverage. This study focuses on data mining issues, comparing and discussing different dimensionality reduction techniques with different dataset features. Eight dimensionality reduction techniques (Principal Component Analysis, Kernel Principal Component Analysis, Singular Value Decomposition, Non-negative matrix factorization, Independent Component Analysis, Multidimensional Scaling, Isomap, and Auto-encoder) are compared and evaluated on simulated datasets. Specifically, this study evaluates and compares the performances of the commonly used dimensionality reduction techniques by exploring the issues about features and characteristics of different techniques through Monte Carlo simulation studies with four machine learning classification models: logistic regression, linear support vector machine, nonlinear support vector machine, and k-nearest neighbors. The results of this study indicated that the DRTs decreased the accuracy, precision, recall, and F1 scores compared with results without DRTs. And overall, MDS performed dramatically better than other DRTs. SVD, PCA, and ICA had similar results because they are all linear DRTs. Although it is also a linear DRT, NMF performed as poorly as KPCA, which is a nonlinear DRT. The other two nonlinear DRTs, Isomap and Autoencoder, had the worst performance in this study. The results provided recommendations for empirical researchers using machine learning models with high dimensional data under specific conditions.

Machine Learning Techniques for Multimedia

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Publisher : Springer Science & Business Media
ISBN 13 : 3540751718
Total Pages : 297 pages
Book Rating : 4.5/5 (47 download)

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Book Synopsis Machine Learning Techniques for Multimedia by : Matthieu Cord

Download or read book Machine Learning Techniques for Multimedia written by Matthieu Cord and published by Springer Science & Business Media. This book was released on 2008-02-07 with total page 297 pages. Available in PDF, EPUB and Kindle. Book excerpt: Processing multimedia content has emerged as a key area for the application of machine learning techniques, where the objectives are to provide insight into the domain from which the data is drawn, and to organize that data and improve the performance of the processes manipulating it. Arising from the EU MUSCLE network, this multidisciplinary book provides a comprehensive coverage of the most important machine learning techniques used and their application in this domain.

Data Analytics in Bioinformatics

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Publisher : John Wiley & Sons
ISBN 13 : 111978560X
Total Pages : 433 pages
Book Rating : 4.1/5 (197 download)

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Book Synopsis Data Analytics in Bioinformatics by : Rabinarayan Satpathy

Download or read book Data Analytics in Bioinformatics written by Rabinarayan Satpathy and published by John Wiley & Sons. This book was released on 2021-01-20 with total page 433 pages. Available in PDF, EPUB and Kindle. Book excerpt: Machine learning techniques are increasingly being used to address problems in computational biology and bioinformatics. Novel machine learning computational techniques to analyze high throughput data in the form of sequences, gene and protein expressions, pathways, and images are becoming vital for understanding diseases and future drug discovery. Machine learning techniques such as Markov models, support vector machines, neural networks, and graphical models have been successful in analyzing life science data because of their capabilities in handling randomness and uncertainty of data noise and in generalization. Machine Learning in Bioinformatics compiles recent approaches in machine learning methods and their applications in addressing contemporary problems in bioinformatics approximating classification and prediction of disease, feature selection, dimensionality reduction, gene selection and classification of microarray data and many more.

Data Preparation for Machine Learning

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Publisher : Machine Learning Mastery
ISBN 13 :
Total Pages : 398 pages
Book Rating : 4./5 ( download)

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Book Synopsis Data Preparation for Machine Learning by : Jason Brownlee

Download or read book Data Preparation for Machine Learning written by Jason Brownlee and published by Machine Learning Mastery. This book was released on 2020-06-30 with total page 398 pages. Available in PDF, EPUB and Kindle. Book excerpt: Data preparation involves transforming raw data in to a form that can be modeled using machine learning algorithms. Cut through the equations, Greek letters, and confusion, and discover the specialized data preparation techniques that you need to know to get the most out of your data on your next project. Using clear explanations, standard Python libraries, and step-by-step tutorial lessons, you will discover how to confidently and effectively prepare your data for predictive modeling with machine learning.

Modern Dimension Reduction

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Publisher : Cambridge University Press
ISBN 13 : 1108991645
Total Pages : 98 pages
Book Rating : 4.1/5 (89 download)

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Book Synopsis Modern Dimension Reduction by : Philip D. Waggoner

Download or read book Modern Dimension Reduction written by Philip D. Waggoner and published by Cambridge University Press. This book was released on 2021-08-05 with total page 98 pages. Available in PDF, EPUB and Kindle. Book excerpt: Data are not only ubiquitous in society, but are increasingly complex both in size and dimensionality. Dimension reduction offers researchers and scholars the ability to make such complex, high dimensional data spaces simpler and more manageable. This Element offers readers a suite of modern unsupervised dimension reduction techniques along with hundreds of lines of R code, to efficiently represent the original high dimensional data space in a simplified, lower dimensional subspace. Launching from the earliest dimension reduction technique principal components analysis and using real social science data, I introduce and walk readers through application of the following techniques: locally linear embedding, t-distributed stochastic neighbor embedding (t-SNE), uniform manifold approximation and projection, self-organizing maps, and deep autoencoders. The result is a well-stocked toolbox of unsupervised algorithms for tackling the complexities of high dimensional data so common in modern society. All code is publicly accessible on Github.

Feature Engineering and Selection

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Publisher : CRC Press
ISBN 13 : 1351609467
Total Pages : 266 pages
Book Rating : 4.3/5 (516 download)

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Book Synopsis Feature Engineering and Selection by : Max Kuhn

Download or read book Feature Engineering and Selection written by Max Kuhn and published by CRC Press. This book was released on 2019-07-25 with total page 266 pages. Available in PDF, EPUB and Kindle. Book excerpt: The process of developing predictive models includes many stages. Most resources focus on the modeling algorithms but neglect other critical aspects of the modeling process. This book describes techniques for finding the best representations of predictors for modeling and for nding the best subset of predictors for improving model performance. A variety of example data sets are used to illustrate the techniques along with R programs for reproducing the results.

Dimension Reduction

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Publisher : Now Publishers Inc
ISBN 13 : 1601983786
Total Pages : 104 pages
Book Rating : 4.6/5 (19 download)

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Book Synopsis Dimension Reduction by : Christopher J. C. Burges

Download or read book Dimension Reduction written by Christopher J. C. Burges and published by Now Publishers Inc. This book was released on 2010 with total page 104 pages. Available in PDF, EPUB and Kindle. Book excerpt: We give a tutorial overview of several foundational methods for dimension reduction. We divide the methods into projective methods and methods that model the manifold on which the data lies. For projective methods, we review projection pursuit, principal component analysis (PCA), kernel PCA, probabilistic PCA, canonical correlation analysis (CCA), kernel CCA, Fisher discriminant analysis, oriented PCA, and several techniques for sufficient dimension reduction. For the manifold methods, we review multidimensional scaling (MDS), landmark MDS, Isomap, locally linear embedding, Laplacian eigenmaps, and spectral clustering. Although the review focuses on foundations, we also provide pointers to some more modern techniques. We also describe the correlation dimension as one method for estimating the intrinsic dimension, and we point out that the notion of dimension can be a scale-dependent quantity. The Nystr m method, which links several of the manifold algorithms, is also reviewed. We use a publicly available dataset to illustrate some of the methods. The goal is to provide a self-contained overview of key concepts underlying many of these algorithms, and to give pointers for further reading.

Multi-Label Dimensionality Reduction

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Publisher : CRC Press
ISBN 13 : 1439806160
Total Pages : 206 pages
Book Rating : 4.4/5 (398 download)

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Book Synopsis Multi-Label Dimensionality Reduction by : Liang Sun

Download or read book Multi-Label Dimensionality Reduction written by Liang Sun and published by CRC Press. This book was released on 2016-04-19 with total page 206 pages. Available in PDF, EPUB and Kindle. Book excerpt: Similar to other data mining and machine learning tasks, multi-label learning suffers from dimensionality. An effective way to mitigate this problem is through dimensionality reduction, which extracts a small number of features by removing irrelevant, redundant, and noisy information. The data mining and machine learning literature currently lacks

Machine Learning Refined

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Publisher : Cambridge University Press
ISBN 13 : 1108480721
Total Pages : 597 pages
Book Rating : 4.1/5 (84 download)

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Book Synopsis Machine Learning Refined by : Jeremy Watt

Download or read book Machine Learning Refined written by Jeremy Watt and published by Cambridge University Press. This book was released on 2020-01-09 with total page 597 pages. Available in PDF, EPUB and Kindle. Book excerpt: An intuitive approach to machine learning covering key concepts, real-world applications, and practical Python coding exercises.

Unsupervised Learning Approaches for Dimensionality Reduction and Data Visualization

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Publisher : CRC Press
ISBN 13 : 1000438317
Total Pages : 174 pages
Book Rating : 4.0/5 (4 download)

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Book Synopsis Unsupervised Learning Approaches for Dimensionality Reduction and Data Visualization by : B.K. Tripathy

Download or read book Unsupervised Learning Approaches for Dimensionality Reduction and Data Visualization written by B.K. Tripathy and published by CRC Press. This book was released on 2021-09-01 with total page 174 pages. Available in PDF, EPUB and Kindle. Book excerpt: Unsupervised Learning Approaches for Dimensionality Reduction and Data Visualization describes such algorithms as Locally Linear Embedding (LLE), Laplacian Eigenmaps, Isomap, Semidefinite Embedding, and t-SNE to resolve the problem of dimensionality reduction in the case of non-linear relationships within the data. Underlying mathematical concepts, derivations, and proofs with logical explanations for these algorithms are discussed, including strengths and limitations. The book highlights important use cases of these algorithms and provides examples along with visualizations. Comparative study of the algorithms is presented to give a clear idea on selecting the best suitable algorithm for a given dataset for efficient dimensionality reduction and data visualization. FEATURES Demonstrates how unsupervised learning approaches can be used for dimensionality reduction Neatly explains algorithms with a focus on the fundamentals and underlying mathematical concepts Describes the comparative study of the algorithms and discusses when and where each algorithm is best suitable for use Provides use cases, illustrative examples, and visualizations of each algorithm Helps visualize and create compact representations of high dimensional and intricate data for various real-world applications and data analysis This book is aimed at professionals, graduate students, and researchers in Computer Science and Engineering, Data Science, Machine Learning, Computer Vision, Data Mining, Deep Learning, Sensor Data Filtering, Feature Extraction for Control Systems, and Medical Instruments Input Extraction.

Data-Driven Science and Engineering

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Publisher : Cambridge University Press
ISBN 13 : 1009098489
Total Pages : 615 pages
Book Rating : 4.0/5 (9 download)

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Book Synopsis Data-Driven Science and Engineering by : Steven L. Brunton

Download or read book Data-Driven Science and Engineering written by Steven L. Brunton and published by Cambridge University Press. This book was released on 2022-05-05 with total page 615 pages. Available in PDF, EPUB and Kindle. Book excerpt: A textbook covering data-science and machine learning methods for modelling and control in engineering and science, with Python and MATLAB®.

Dimensionality Reduction with Unsupervised Nearest Neighbors

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Publisher : Springer Science & Business Media
ISBN 13 : 3642386520
Total Pages : 137 pages
Book Rating : 4.6/5 (423 download)

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Book Synopsis Dimensionality Reduction with Unsupervised Nearest Neighbors by : Oliver Kramer

Download or read book Dimensionality Reduction with Unsupervised Nearest Neighbors written by Oliver Kramer and published by Springer Science & Business Media. This book was released on 2013-05-30 with total page 137 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is devoted to a novel approach for dimensionality reduction based on the famous nearest neighbor method that is a powerful classification and regression approach. It starts with an introduction to machine learning concepts and a real-world application from the energy domain. Then, unsupervised nearest neighbors (UNN) is introduced as efficient iterative method for dimensionality reduction. Various UNN models are developed step by step, reaching from a simple iterative strategy for discrete latent spaces to a stochastic kernel-based algorithm for learning submanifolds with independent parameterizations. Extensions that allow the embedding of incomplete and noisy patterns are introduced. Various optimization approaches are compared, from evolutionary to swarm-based heuristics. Experimental comparisons to related methodologies taking into account artificial test data sets and also real-world data demonstrate the behavior of UNN in practical scenarios. The book contains numerous color figures to illustrate the introduced concepts and to highlight the experimental results.

Machine Learning Models and Algorithms for Big Data Classification

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Publisher : Springer
ISBN 13 : 1489976418
Total Pages : 364 pages
Book Rating : 4.4/5 (899 download)

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Book Synopsis Machine Learning Models and Algorithms for Big Data Classification by : Shan Suthaharan

Download or read book Machine Learning Models and Algorithms for Big Data Classification written by Shan Suthaharan and published by Springer. This book was released on 2015-10-20 with total page 364 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents machine learning models and algorithms to address big data classification problems. Existing machine learning techniques like the decision tree (a hierarchical approach), random forest (an ensemble hierarchical approach), and deep learning (a layered approach) are highly suitable for the system that can handle such problems. This book helps readers, especially students and newcomers to the field of big data and machine learning, to gain a quick understanding of the techniques and technologies; therefore, the theory, examples, and programs (Matlab and R) presented in this book have been simplified, hardcoded, repeated, or spaced for improvements. They provide vehicles to test and understand the complicated concepts of various topics in the field. It is expected that the readers adopt these programs to experiment with the examples, and then modify or write their own programs toward advancing their knowledge for solving more complex and challenging problems. The presentation format of this book focuses on simplicity, readability, and dependability so that both undergraduate and graduate students as well as new researchers, developers, and practitioners in this field can easily trust and grasp the concepts, and learn them effectively. It has been written to reduce the mathematical complexity and help the vast majority of readers to understand the topics and get interested in the field. This book consists of four parts, with the total of 14 chapters. The first part mainly focuses on the topics that are needed to help analyze and understand data and big data. The second part covers the topics that can explain the systems required for processing big data. The third part presents the topics required to understand and select machine learning techniques to classify big data. Finally, the fourth part concentrates on the topics that explain the scaling-up machine learning, an important solution for modern big data problems.

Computational Genomics with R

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Publisher : CRC Press
ISBN 13 : 1498781861
Total Pages : 462 pages
Book Rating : 4.4/5 (987 download)

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Book Synopsis Computational Genomics with R by : Altuna Akalin

Download or read book Computational Genomics with R written by Altuna Akalin and published by CRC Press. This book was released on 2020-12-16 with total page 462 pages. Available in PDF, EPUB and Kindle. Book excerpt: Computational Genomics with R provides a starting point for beginners in genomic data analysis and also guides more advanced practitioners to sophisticated data analysis techniques in genomics. The book covers topics from R programming, to machine learning and statistics, to the latest genomic data analysis techniques. The text provides accessible information and explanations, always with the genomics context in the background. This also contains practical and well-documented examples in R so readers can analyze their data by simply reusing the code presented. As the field of computational genomics is interdisciplinary, it requires different starting points for people with different backgrounds. For example, a biologist might skip sections on basic genome biology and start with R programming, whereas a computer scientist might want to start with genome biology. After reading: You will have the basics of R and be able to dive right into specialized uses of R for computational genomics such as using Bioconductor packages. You will be familiar with statistics, supervised and unsupervised learning techniques that are important in data modeling, and exploratory analysis of high-dimensional data. You will understand genomic intervals and operations on them that are used for tasks such as aligned read counting and genomic feature annotation. You will know the basics of processing and quality checking high-throughput sequencing data. You will be able to do sequence analysis, such as calculating GC content for parts of a genome or finding transcription factor binding sites. You will know about visualization techniques used in genomics, such as heatmaps, meta-gene plots, and genomic track visualization. You will be familiar with analysis of different high-throughput sequencing data sets, such as RNA-seq, ChIP-seq, and BS-seq. You will know basic techniques for integrating and interpreting multi-omics datasets. Altuna Akalin is a group leader and head of the Bioinformatics and Omics Data Science Platform at the Berlin Institute of Medical Systems Biology, Max Delbrück Center, Berlin. He has been developing computational methods for analyzing and integrating large-scale genomics data sets since 2002. He has published an extensive body of work in this area. The framework for this book grew out of the yearly computational genomics courses he has been organizing and teaching since 2015.

Feature Engineering for Machine Learning

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Publisher : "O'Reilly Media, Inc."
ISBN 13 : 1491953195
Total Pages : 218 pages
Book Rating : 4.4/5 (919 download)

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Book Synopsis Feature Engineering for Machine Learning by : Alice Zheng

Download or read book Feature Engineering for Machine Learning written by Alice Zheng and published by "O'Reilly Media, Inc.". This book was released on 2018-03-23 with total page 218 pages. Available in PDF, EPUB and Kindle. Book excerpt: Feature engineering is a crucial step in the machine-learning pipeline, yet this topic is rarely examined on its own. With this practical book, you’ll learn techniques for extracting and transforming features—the numeric representations of raw data—into formats for machine-learning models. Each chapter guides you through a single data problem, such as how to represent text or image data. Together, these examples illustrate the main principles of feature engineering. Rather than simply teach these principles, authors Alice Zheng and Amanda Casari focus on practical application with exercises throughout the book. The closing chapter brings everything together by tackling a real-world, structured dataset with several feature-engineering techniques. Python packages including numpy, Pandas, Scikit-learn, and Matplotlib are used in code examples. You’ll examine: Feature engineering for numeric data: filtering, binning, scaling, log transforms, and power transforms Natural text techniques: bag-of-words, n-grams, and phrase detection Frequency-based filtering and feature scaling for eliminating uninformative features Encoding techniques of categorical variables, including feature hashing and bin-counting Model-based feature engineering with principal component analysis The concept of model stacking, using k-means as a featurization technique Image feature extraction with manual and deep-learning techniques

Computational Intelligence and Healthcare Informatics

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Publisher : John Wiley & Sons
ISBN 13 : 1119818680
Total Pages : 434 pages
Book Rating : 4.1/5 (198 download)

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Book Synopsis Computational Intelligence and Healthcare Informatics by : Om Prakash Jena

Download or read book Computational Intelligence and Healthcare Informatics written by Om Prakash Jena and published by John Wiley & Sons. This book was released on 2021-10-19 with total page 434 pages. Available in PDF, EPUB and Kindle. Book excerpt: COMPUTATIONAL INTELLIGENCE and HEALTHCARE INFORMATICS The book provides the state-of-the-art innovation, research, design, and implements methodological and algorithmic solutions to data processing problems, designing and analysing evolving trends in health informatics, intelligent disease prediction, and computer-aided diagnosis. Computational intelligence (CI) refers to the ability of computers to accomplish tasks that are normally completed by intelligent beings such as humans and animals. With the rapid advance of technology, artificial intelligence (AI) techniques are being effectively used in the fields of health to improve the efficiency of treatments, avoid the risk of false diagnoses, make therapeutic decisions, and predict the outcome in many clinical scenarios. Modern health treatments are faced with the challenge of acquiring, analyzing and applying the large amount of knowledge necessary to solve complex problems. Computational intelligence in healthcare mainly uses computer techniques to perform clinical diagnoses and suggest treatments. In the present scenario of computing, CI tools present adaptive mechanisms that permit the understanding of data in difficult and changing environments. The desired results of CI technologies profit medical fields by assembling patients with the same types of diseases or fitness problems so that healthcare facilities can provide effectual treatments. This book starts with the fundamentals of computer intelligence and the techniques and procedures associated with it. Contained in this book are state-of-the-art methods of computational intelligence and other allied techniques used in the healthcare system, as well as advances in different CI methods that will confront the problem of effective data analysis and storage faced by healthcare institutions. The objective of this book is to provide researchers with a platform encompassing state-of-the-art innovations; research and design; implementation of methodological and algorithmic solutions to data processing problems; and the design and analysis of evolving trends in health informatics, intelligent disease prediction and computer-aided diagnosis. Audience The book is of interest to artificial intelligence and biomedical scientists, researchers, engineers and students in various settings such as pharmaceutical & biotechnology companies, virtual assistants developing companies, medical imaging & diagnostics centers, wearable device designers, healthcare assistance robot manufacturers, precision medicine testers, hospital management, and researchers working in healthcare system.

Mining of Massive Datasets

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Publisher : Cambridge University Press
ISBN 13 : 1107077230
Total Pages : 480 pages
Book Rating : 4.1/5 (7 download)

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Book Synopsis Mining of Massive Datasets by : Jure Leskovec

Download or read book Mining of Massive Datasets written by Jure Leskovec and published by Cambridge University Press. This book was released on 2014-11-13 with total page 480 pages. Available in PDF, EPUB and Kindle. Book excerpt: Now in its second edition, this book focuses on practical algorithms for mining data from even the largest datasets.