Bayesian inference with INLA

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Publisher : CRC Press
ISBN 13 : 1351707205
Total Pages : 330 pages
Book Rating : 4.3/5 (517 download)

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Book Synopsis Bayesian inference with INLA by : Virgilio Gomez-Rubio

Download or read book Bayesian inference with INLA written by Virgilio Gomez-Rubio and published by CRC Press. This book was released on 2020-02-20 with total page 330 pages. Available in PDF, EPUB and Kindle. Book excerpt: The integrated nested Laplace approximation (INLA) is a recent computational method that can fit Bayesian models in a fraction of the time required by typical Markov chain Monte Carlo (MCMC) methods. INLA focuses on marginal inference on the model parameters of latent Gaussian Markov random fields models and exploits conditional independence properties in the model for computational speed. Bayesian Inference with INLA provides a description of INLA and its associated R package for model fitting. This book describes the underlying methodology as well as how to fit a wide range of models with R. Topics covered include generalized linear mixed-effects models, multilevel models, spatial and spatio-temporal models, smoothing methods, survival analysis, imputation of missing values, and mixture models. Advanced features of the INLA package and how to extend the number of priors and latent models available in the package are discussed. All examples in the book are fully reproducible and datasets and R code are available from the book website. This book will be helpful to researchers from different areas with some background in Bayesian inference that want to apply the INLA method in their work. The examples cover topics on biostatistics, econometrics, education, environmental science, epidemiology, public health, and the social sciences.

Bayesian Regression Modeling with INLA

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Publisher : CRC Press
ISBN 13 : 1351165747
Total Pages : 304 pages
Book Rating : 4.3/5 (511 download)

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Book Synopsis Bayesian Regression Modeling with INLA by : Xiaofeng Wang

Download or read book Bayesian Regression Modeling with INLA written by Xiaofeng Wang and published by CRC Press. This book was released on 2018-01-29 with total page 304 pages. Available in PDF, EPUB and Kindle. Book excerpt: INLA stands for Integrated Nested Laplace Approximations, which is a new method for fitting a broad class of Bayesian regression models. No samples of the posterior marginal distributions need to be drawn using INLA, so it is a computationally convenient alternative to Markov chain Monte Carlo (MCMC), the standard tool for Bayesian inference. Bayesian Regression Modeling with INLA covers a wide range of modern regression models and focuses on the INLA technique for building Bayesian models using real-world data and assessing their validity. A key theme throughout the book is that it makes sense to demonstrate the interplay of theory and practice with reproducible studies. Complete R commands are provided for each example, and a supporting website holds all of the data described in the book. An R package including the data and additional functions in the book is available to download. The book is aimed at readers who have a basic knowledge of statistical theory and Bayesian methodology. It gets readers up to date on the latest in Bayesian inference using INLA and prepares them for sophisticated, real-world work. Xiaofeng Wang is Professor of Medicine and Biostatistics at the Cleveland Clinic Lerner College of Medicine of Case Western Reserve University and a Full Staff in the Department of Quantitative Health Sciences at Cleveland Clinic. Yu Ryan Yue is Associate Professor of Statistics in the Paul H. Chook Department of Information Systems and Statistics at Baruch College, The City University of New York. Julian J. Faraway is Professor of Statistics in the Department of Mathematical Sciences at the University of Bath.

Advanced Spatial Modeling with Stochastic Partial Differential Equations Using R and INLA

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Publisher : CRC Press
ISBN 13 : 0429629850
Total Pages : 284 pages
Book Rating : 4.4/5 (296 download)

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Book Synopsis Advanced Spatial Modeling with Stochastic Partial Differential Equations Using R and INLA by : Elias T. Krainski

Download or read book Advanced Spatial Modeling with Stochastic Partial Differential Equations Using R and INLA written by Elias T. Krainski and published by CRC Press. This book was released on 2018-12-07 with total page 284 pages. Available in PDF, EPUB and Kindle. Book excerpt: Modeling spatial and spatio-temporal continuous processes is an important and challenging problem in spatial statistics. Advanced Spatial Modeling with Stochastic Partial Differential Equations Using R and INLA describes in detail the stochastic partial differential equations (SPDE) approach for modeling continuous spatial processes with a Matérn covariance, which has been implemented using the integrated nested Laplace approximation (INLA) in the R-INLA package. Key concepts about modeling spatial processes and the SPDE approach are explained with examples using simulated data and real applications. This book has been authored by leading experts in spatial statistics, including the main developers of the INLA and SPDE methodologies and the R-INLA package. It also includes a wide range of applications: * Spatial and spatio-temporal models for continuous outcomes * Analysis of spatial and spatio-temporal point patterns * Coregionalization spatial and spatio-temporal models * Measurement error spatial models * Modeling preferential sampling * Spatial and spatio-temporal models with physical barriers * Survival analysis with spatial effects * Dynamic space-time regression * Spatial and spatio-temporal models for extremes * Hurdle models with spatial effects * Penalized Complexity priors for spatial models All the examples in the book are fully reproducible. Further information about this book, as well as the R code and datasets used, is available from the book website at http://www.r-inla.org/spde-book. The tools described in this book will be useful to researchers in many fields such as biostatistics, spatial statistics, environmental sciences, epidemiology, ecology and others. Graduate and Ph.D. students will also find this book and associated files a valuable resource to learn INLA and the SPDE approach for spatial modeling.

Spatial and Spatio-temporal Bayesian Models with R - INLA

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Author :
Publisher : John Wiley & Sons
ISBN 13 : 1118326555
Total Pages : 322 pages
Book Rating : 4.1/5 (183 download)

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Book Synopsis Spatial and Spatio-temporal Bayesian Models with R - INLA by : Marta Blangiardo

Download or read book Spatial and Spatio-temporal Bayesian Models with R - INLA written by Marta Blangiardo and published by John Wiley & Sons. This book was released on 2015-06-02 with total page 322 pages. Available in PDF, EPUB and Kindle. Book excerpt: Spatial and Spatio-Temporal Bayesian Models with R-INLA provides a much needed, practically oriented & innovative presentation of the combination of Bayesian methodology and spatial statistics. The authors combine an introduction to Bayesian theory and methodology with a focus on the spatial and spatio-temporal models used within the Bayesian framework and a series of practical examples which allow the reader to link the statistical theory presented to real data problems. The numerous examples from the fields of epidemiology, biostatistics and social science all are coded in the R package R-INLA, which has proven to be a valid alternative to the commonly used Markov Chain Monte Carlo simulations

Geospatial Health Data

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Publisher : CRC Press
ISBN 13 : 1000732150
Total Pages : 216 pages
Book Rating : 4.0/5 (7 download)

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Book Synopsis Geospatial Health Data by : Paula Moraga

Download or read book Geospatial Health Data written by Paula Moraga and published by CRC Press. This book was released on 2019-11-26 with total page 216 pages. Available in PDF, EPUB and Kindle. Book excerpt: Geospatial health data are essential to inform public health and policy. These data can be used to quantify disease burden, understand geographic and temporal patterns, identify risk factors, and measure inequalities. Geospatial Health Data: Modeling and Visualization with R-INLA and Shiny describes spatial and spatio-temporal statistical methods and visualization techniques to analyze georeferenced health data in R. The book covers the following topics: Manipulate and transform point, areal, and raster data, Bayesian hierarchical models for disease mapping using areal and geostatistical data, Fit and interpret spatial and spatio-temporal models with the Integrated Nested Laplace Approximations (INLA) and the Stochastic Partial Differential Equation (SPDE) approaches, Create interactive and static visualizations such as disease maps and time plots, Reproducible R Markdown reports, interactive dashboards, and Shiny web applications that facilitate the communication of insights to collaborators and policy makers. The book features fully reproducible examples of several disease and environmental applications using real-world data such as malaria in The Gambia, cancer in Scotland and USA, and air pollution in Spain. Examples in the book focus on health applications, but the approaches covered are also applicable to other fields that use georeferenced data including epidemiology, ecology, demography or criminology. The book provides clear descriptions of the R code for data importing, manipulation, modeling and visualization, as well as the interpretation of the results. This ensures contents are fully reproducible and accessible for students, researchers and practitioners.

Complex Data Modeling and Computationally Intensive Statistical Methods

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Publisher : Springer Science & Business Media
ISBN 13 : 8847013860
Total Pages : 170 pages
Book Rating : 4.8/5 (47 download)

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Book Synopsis Complex Data Modeling and Computationally Intensive Statistical Methods by : Pietro Mantovan

Download or read book Complex Data Modeling and Computationally Intensive Statistical Methods written by Pietro Mantovan and published by Springer Science & Business Media. This book was released on 2011-01-27 with total page 170 pages. Available in PDF, EPUB and Kindle. Book excerpt: Selected from the conference "S.Co.2009: Complex Data Modeling and Computationally Intensive Methods for Estimation and Prediction," these 20 papers cover the latest in statistical methods and computational techniques for complex and high dimensional datasets.

Computational Bayesian Statistics

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Publisher : Cambridge University Press
ISBN 13 : 1108481035
Total Pages : 256 pages
Book Rating : 4.1/5 (84 download)

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Book Synopsis Computational Bayesian Statistics by : M. Antónia Amaral Turkman

Download or read book Computational Bayesian Statistics written by M. Antónia Amaral Turkman and published by Cambridge University Press. This book was released on 2019-02-28 with total page 256 pages. Available in PDF, EPUB and Kindle. Book excerpt: This integrated introduction to fundamentals, computation, and software is your key to understanding and using advanced Bayesian methods.

Bayesian Modeling of Spatio-Temporal Data with R

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Publisher : CRC Press
ISBN 13 : 1000543692
Total Pages : 385 pages
Book Rating : 4.0/5 (5 download)

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Book Synopsis Bayesian Modeling of Spatio-Temporal Data with R by : Sujit Sahu

Download or read book Bayesian Modeling of Spatio-Temporal Data with R written by Sujit Sahu and published by CRC Press. This book was released on 2022-02-23 with total page 385 pages. Available in PDF, EPUB and Kindle. Book excerpt: Applied sciences, both physical and social, such as atmospheric, biological, climate, demographic, economic, ecological, environmental, oceanic and political, routinely gather large volumes of spatial and spatio-temporal data in order to make wide ranging inference and prediction. Ideally such inferential tasks should be approached through modelling, which aids in estimation of uncertainties in all conclusions drawn from such data. Unified Bayesian modelling, implemented through user friendly software packages, provides a crucial key to unlocking the full power of these methods for solving challenging practical problems. Key features of the book: • Accessible detailed discussion of a majority of all aspects of Bayesian methods and computations with worked examples, numerical illustrations and exercises • A spatial statistics jargon buster chapter that enables the reader to build up a vocabulary without getting clouded in modeling and technicalities • Computation and modeling illustrations are provided with the help of the dedicated R package bmstdr, allowing the reader to use well-known packages and platforms, such as rstan, INLA, spBayes, spTimer, spTDyn, CARBayes, CARBayesST, etc • Included are R code notes detailing the algorithms used to produce all the tables and figures, with data and code available via an online supplement • Two dedicated chapters discuss practical examples of spatio-temporal modeling of point referenced and areal unit data • Throughout, the emphasis has been on validating models by splitting data into test and training sets following on the philosophy of machine learning and data science This book is designed to make spatio-temporal modeling and analysis accessible and understandable to a wide audience of students and researchers, from mathematicians and statisticians to practitioners in the applied sciences. It presents most of the modeling with the help of R commands written in a purposefully developed R package to facilitate spatio-temporal modeling. It does not compromise on rigour, as it presents the underlying theories of Bayesian inference and computation in standalone chapters, which would be appeal those interested in the theoretical details. By avoiding hard core mathematics and calculus, this book aims to be a bridge that removes the statistical knowledge gap from among the applied scientists.

Gaussian Markov Random Fields

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Publisher : CRC Press
ISBN 13 : 0203492021
Total Pages : 280 pages
Book Rating : 4.2/5 (34 download)

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Book Synopsis Gaussian Markov Random Fields by : Havard Rue

Download or read book Gaussian Markov Random Fields written by Havard Rue and published by CRC Press. This book was released on 2005-02-18 with total page 280 pages. Available in PDF, EPUB and Kindle. Book excerpt: Gaussian Markov Random Field (GMRF) models are most widely used in spatial statistics - a very active area of research in which few up-to-date reference works are available. This is the first book on the subject that provides a unified framework of GMRFs with particular emphasis on the computational aspects. This book includes extensive case-studie

Statistical Modelling and Regression Structures

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Publisher : Springer Science & Business Media
ISBN 13 : 3790824135
Total Pages : 486 pages
Book Rating : 4.7/5 (98 download)

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Book Synopsis Statistical Modelling and Regression Structures by : Thomas Kneib

Download or read book Statistical Modelling and Regression Structures written by Thomas Kneib and published by Springer Science & Business Media. This book was released on 2010-01-12 with total page 486 pages. Available in PDF, EPUB and Kindle. Book excerpt: The contributions collected in this book have been written by well-known statisticians to acknowledge Ludwig Fahrmeir's far-reaching impact on Statistics as a science, while celebrating his 65th birthday. The contributions cover broad areas of contemporary statistical model building, including semiparametric and geoadditive regression, Bayesian inference in complex regression models, time series modelling, statistical regularization, graphical models and stochastic volatility models.

Bayes Rules!

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Publisher : CRC Press
ISBN 13 : 1000529568
Total Pages : 606 pages
Book Rating : 4.0/5 (5 download)

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Book Synopsis Bayes Rules! by : Alicia A. Johnson

Download or read book Bayes Rules! written by Alicia A. Johnson and published by CRC Press. This book was released on 2022-03-03 with total page 606 pages. Available in PDF, EPUB and Kindle. Book excerpt: Praise for Bayes Rules!: An Introduction to Applied Bayesian Modeling “A thoughtful and entertaining book, and a great way to get started with Bayesian analysis.” Andrew Gelman, Columbia University “The examples are modern, and even many frequentist intro books ignore important topics (like the great p-value debate) that the authors address. The focus on simulation for understanding is excellent.” Amy Herring, Duke University “I sincerely believe that a generation of students will cite this book as inspiration for their use of – and love for – Bayesian statistics. The narrative holds the reader’s attention and flows naturally – almost conversationally. Put simply, this is perhaps the most engaging introductory statistics textbook I have ever read. [It] is a natural choice for an introductory undergraduate course in applied Bayesian statistics." Yue Jiang, Duke University “This is by far the best book I’ve seen on how to (and how to teach students to) do Bayesian modeling and understand the underlying mathematics and computation. The authors build intuition and scaffold ideas expertly, using interesting real case studies, insightful graphics, and clear explanations. The scope of this book is vast – from basic building blocks to hierarchical modeling, but the authors’ thoughtful organization allows the reader to navigate this journey smoothly. And impressively, by the end of the book, one can run sophisticated Bayesian models and actually understand the whys, whats, and hows.” Paul Roback, St. Olaf College “The authors provide a compelling, integrated, accessible, and non-religious introduction to statistical modeling using a Bayesian approach. They outline a principled approach that features computational implementations and model assessment with ethical implications interwoven throughout. Students and instructors will find the conceptual and computational exercises to be fresh and engaging.” Nicholas Horton, Amherst College An engaging, sophisticated, and fun introduction to the field of Bayesian statistics, Bayes Rules!: An Introduction to Applied Bayesian Modeling brings the power of modern Bayesian thinking, modeling, and computing to a broad audience. In particular, the book is an ideal resource for advanced undergraduate statistics students and practitioners with comparable experience. Bayes Rules! empowers readers to weave Bayesian approaches into their everyday practice. Discussions and applications are data driven. A natural progression from fundamental to multivariable, hierarchical models emphasizes a practical and generalizable model building process. The evaluation of these Bayesian models reflects the fact that a data analysis does not exist in a vacuum. Features • Utilizes data-driven examples and exercises. • Emphasizes the iterative model building and evaluation process. • Surveys an interconnected range of multivariable regression and classification models. • Presents fundamental Markov chain Monte Carlo simulation. • Integrates R code, including RStan modeling tools and the bayesrules package. • Encourages readers to tap into their intuition and learn by doing. • Provides a friendly and inclusive introduction to technical Bayesian concepts. • Supports Bayesian applications with foundational Bayesian theory.

Bayesian Statistics for Beginners

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Publisher : Oxford University Press, USA
ISBN 13 : 0198841299
Total Pages : 430 pages
Book Rating : 4.1/5 (988 download)

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Book Synopsis Bayesian Statistics for Beginners by : Therese M. Donovan

Download or read book Bayesian Statistics for Beginners written by Therese M. Donovan and published by Oxford University Press, USA. This book was released on 2019 with total page 430 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is an entry-level book on Bayesian statistics written in a casual, and conversational tone. The authors walk a reader through many sample problems step-by-step to provide those with little background in math or statistics with the vocabulary, notation, and understanding of the calculations used in many Bayesian problems.

Bayesian Essentials with R

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Publisher : Springer Science & Business Media
ISBN 13 : 1461486874
Total Pages : 305 pages
Book Rating : 4.4/5 (614 download)

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Book Synopsis Bayesian Essentials with R by : Jean-Michel Marin

Download or read book Bayesian Essentials with R written by Jean-Michel Marin and published by Springer Science & Business Media. This book was released on 2013-10-28 with total page 305 pages. Available in PDF, EPUB and Kindle. Book excerpt: This Bayesian modeling book provides a self-contained entry to computational Bayesian statistics. Focusing on the most standard statistical models and backed up by real datasets and an all-inclusive R (CRAN) package called bayess, the book provides an operational methodology for conducting Bayesian inference, rather than focusing on its theoretical and philosophical justifications. Readers are empowered to participate in the real-life data analysis situations depicted here from the beginning. Special attention is paid to the derivation of prior distributions in each case and specific reference solutions are given for each of the models. Similarly, computational details are worked out to lead the reader towards an effective programming of the methods given in the book. In particular, all R codes are discussed with enough detail to make them readily understandable and expandable. Bayesian Essentials with R can be used as a textbook at both undergraduate and graduate levels. It is particularly useful with students in professional degree programs and scientists to analyze data the Bayesian way. The text will also enhance introductory courses on Bayesian statistics. Prerequisites for the book are an undergraduate background in probability and statistics, if not in Bayesian statistics.

Bayesian Statistical Methods

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Publisher : CRC Press
ISBN 13 : 0429510918
Total Pages : 288 pages
Book Rating : 4.4/5 (295 download)

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Book Synopsis Bayesian Statistical Methods by : Brian J. Reich

Download or read book Bayesian Statistical Methods written by Brian J. Reich and published by CRC Press. This book was released on 2019-04-12 with total page 288 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bayesian Statistical Methods provides data scientists with the foundational and computational tools needed to carry out a Bayesian analysis. This book focuses on Bayesian methods applied routinely in practice including multiple linear regression, mixed effects models and generalized linear models (GLM). The authors include many examples with complete R code and comparisons with analogous frequentist procedures. In addition to the basic concepts of Bayesian inferential methods, the book covers many general topics: Advice on selecting prior distributions Computational methods including Markov chain Monte Carlo (MCMC) Model-comparison and goodness-of-fit measures, including sensitivity to priors Frequentist properties of Bayesian methods Case studies covering advanced topics illustrate the flexibility of the Bayesian approach: Semiparametric regression Handling of missing data using predictive distributions Priors for high-dimensional regression models Computational techniques for large datasets Spatial data analysis The advanced topics are presented with sufficient conceptual depth that the reader will be able to carry out such analysis and argue the relative merits of Bayesian and classical methods. A repository of R code, motivating data sets, and complete data analyses are available on the book’s website. Brian J. Reich, Associate Professor of Statistics at North Carolina State University, is currently the editor-in-chief of the Journal of Agricultural, Biological, and Environmental Statistics and was awarded the LeRoy & Elva Martin Teaching Award. Sujit K. Ghosh, Professor of Statistics at North Carolina State University, has over 22 years of research and teaching experience in conducting Bayesian analyses, received the Cavell Brownie mentoring award, and served as the Deputy Director at the Statistical and Applied Mathematical Sciences Institute.

Bayesian and Frequentist Regression Methods

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Publisher : Springer Science & Business Media
ISBN 13 : 1441909257
Total Pages : 700 pages
Book Rating : 4.4/5 (419 download)

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Book Synopsis Bayesian and Frequentist Regression Methods by : Jon Wakefield

Download or read book Bayesian and Frequentist Regression Methods written by Jon Wakefield and published by Springer Science & Business Media. This book was released on 2013-01-04 with total page 700 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bayesian and Frequentist Regression Methods provides a modern account of both Bayesian and frequentist methods of regression analysis. Many texts cover one or the other of the approaches, but this is the most comprehensive combination of Bayesian and frequentist methods that exists in one place. The two philosophical approaches to regression methodology are featured here as complementary techniques, with theory and data analysis providing supplementary components of the discussion. In particular, methods are illustrated using a variety of data sets. The majority of the data sets are drawn from biostatistics but the techniques are generalizable to a wide range of other disciplines.

Spatio-Temporal Methods in Environmental Epidemiology

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Publisher : CRC Press
ISBN 13 : 1482237040
Total Pages : 383 pages
Book Rating : 4.4/5 (822 download)

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Book Synopsis Spatio-Temporal Methods in Environmental Epidemiology by : Gavin Shaddick

Download or read book Spatio-Temporal Methods in Environmental Epidemiology written by Gavin Shaddick and published by CRC Press. This book was released on 2015-06-17 with total page 383 pages. Available in PDF, EPUB and Kindle. Book excerpt: Teaches Students How to Perform Spatio-Temporal Analyses within Epidemiological StudiesSpatio-Temporal Methods in Environmental Epidemiology is the first book of its kind to specifically address the interface between environmental epidemiology and spatio-temporal modeling. In response to the growing need for collaboration between statisticians and

Bayesian Computation with R

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Publisher : Springer Science & Business Media
ISBN 13 : 0387922989
Total Pages : 304 pages
Book Rating : 4.3/5 (879 download)

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Book Synopsis Bayesian Computation with R by : Jim Albert

Download or read book Bayesian Computation with R written by Jim Albert and published by Springer Science & Business Media. This book was released on 2009-04-20 with total page 304 pages. Available in PDF, EPUB and Kindle. Book excerpt: There has been dramatic growth in the development and application of Bayesian inference in statistics. Berger (2000) documents the increase in Bayesian activity by the number of published research articles, the number of books,andtheextensivenumberofapplicationsofBayesianarticlesinapplied disciplines such as science and engineering. One reason for the dramatic growth in Bayesian modeling is the availab- ity of computational algorithms to compute the range of integrals that are necessary in a Bayesian posterior analysis. Due to the speed of modern c- puters, it is now possible to use the Bayesian paradigm to ?t very complex models that cannot be ?t by alternative frequentist methods. To ?t Bayesian models, one needs a statistical computing environment. This environment should be such that one can: write short scripts to de?ne a Bayesian model use or write functions to summarize a posterior distribution use functions to simulate from the posterior distribution construct graphs to illustrate the posterior inference An environment that meets these requirements is the R system. R provides a wide range of functions for data manipulation, calculation, and graphical d- plays. Moreover, it includes a well-developed, simple programming language that users can extend by adding new functions. Many such extensions of the language in the form of packages are easily downloadable from the Comp- hensive R Archive Network (CRAN).