Survival Analysis with Uncertain Endpoints Using an Internal Validation Subsample

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Publisher :
ISBN 13 :
Total Pages : 134 pages
Book Rating : 4.:/5 (91 download)

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Book Synopsis Survival Analysis with Uncertain Endpoints Using an Internal Validation Subsample by : Jarcy Zee

Download or read book Survival Analysis with Uncertain Endpoints Using an Internal Validation Subsample written by Jarcy Zee and published by . This book was released on 2014 with total page 134 pages. Available in PDF, EPUB and Kindle. Book excerpt: When a true survival endpoint cannot be assessed for some subjects, an alternative endpoint that measures the true endpoint with error may be collected, which often occurs when the true endpoint is too invasive or costly to obtain. We develop nonparametric and semiparametric estimated likelihood functions that incorporate both uncertain endpoints available for all participants and true endpoints available for only a subset of participants. We propose maximum estimated likelihood estimators of the discrete survival function of time to the true endpoint and of a hazard ratio representing the effect of a binary or continuous covariate assuming a proportional hazards model. We show that the proposed estimators are consistent and asymptotically normal and develop the analytical forms of the variance estimators. Through extensive simulations, we also show that the proposed estimators have little bias compared to the naive estimator, which uses only uncertain endpoints, and are more efficient with moderate missingness compared to the complete-case estimator, which uses only available true endpoints. We illustrate the proposed method by estimating the risk of developing Alzheimer's disease using data from the Alzheimer's Disease Neuroimaging Initiative. Using our proposed semiparametric estimator, we develop optimal study design strategies to compare survival across treatment groups for a new trial with these data characteristics. We demonstrate how to calculate the optimal number of true events in the validation set with desired power using simulated data when assuming the baseline distribution of the true event, effect size, correlation between outcomes, and proportion of true outcomes that are missing can be estimated from pilot studies. We also propose a sample size formula that does not depend on baseline distribution of the true event and show that power calculated by the formula matches well with simulation based results. Using results from a Ginkgo Evaluation of Memory study, we calculate the number of true events in the validation set that would need to be observed for new studies comparing development of Alzheimer's disease among those with and without antihypertensive use, as well as the total number of subjects and number in the validation set to be recruited for these new trials.

Survival Analysis Using S

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Publisher : CRC Press
ISBN 13 : 0203501411
Total Pages : 277 pages
Book Rating : 4.2/5 (35 download)

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Book Synopsis Survival Analysis Using S by : Mara Tableman

Download or read book Survival Analysis Using S written by Mara Tableman and published by CRC Press. This book was released on 2003-07-28 with total page 277 pages. Available in PDF, EPUB and Kindle. Book excerpt: Survival Analysis Using S: Analysis of Time-to-Event Data is designed as a text for a one-semester or one-quarter course in survival analysis for upper-level or graduate students in statistics, biostatistics, and epidemiology. Prerequisites are a standard pre-calculus first course in probability and statistics, and a course in applied linear regression models. No prior knowledge of S or R is assumed. A wide choice of exercises is included, some intended for more advanced students with a first course in mathematical statistics. The authors emphasize parametric log-linear models, while also detailing nonparametric procedures along with model building and data diagnostics. Medical and public health researchers will find the discussion of cut point analysis with bootstrap validation, competing risks and the cumulative incidence estimator, and the analysis of left-truncated and right-censored data invaluable. The bootstrap procedure checks robustness of cut point analysis and determines cut point(s). In a chapter written by Stephen Portnoy, censored regression quantiles - a new nonparametric regression methodology (2003) - is developed to identify important forms of population heterogeneity and to detect departures from traditional Cox models. By generalizing the Kaplan-Meier estimator to regression models for conditional quantiles, this methods provides a valuable complement to traditional Cox proportional hazards approaches.

An Introduction to Survival Analysis Using Stata, Second Edition

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Publisher : Stata Press
ISBN 13 : 1597180416
Total Pages : 398 pages
Book Rating : 4.5/5 (971 download)

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Book Synopsis An Introduction to Survival Analysis Using Stata, Second Edition by : Mario Cleves

Download or read book An Introduction to Survival Analysis Using Stata, Second Edition written by Mario Cleves and published by Stata Press. This book was released on 2008-05-15 with total page 398 pages. Available in PDF, EPUB and Kindle. Book excerpt: "[This book] provides new researchers with the foundation for understanding the various approaches for analyzing time-to-event data. This book serves not only as a tutorial for those wishing to learn survival analysis but as a ... reference for experienced researchers ..."--Book jacket.

Registries for Evaluating Patient Outcomes

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Publisher : Government Printing Office
ISBN 13 : 1587634333
Total Pages : 385 pages
Book Rating : 4.5/5 (876 download)

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Book Synopsis Registries for Evaluating Patient Outcomes by : Agency for Healthcare Research and Quality/AHRQ

Download or read book Registries for Evaluating Patient Outcomes written by Agency for Healthcare Research and Quality/AHRQ and published by Government Printing Office. This book was released on 2014-04-01 with total page 385 pages. Available in PDF, EPUB and Kindle. Book excerpt: This User’s Guide is intended to support the design, implementation, analysis, interpretation, and quality evaluation of registries created to increase understanding of patient outcomes. For the purposes of this guide, a patient registry is an organized system that uses observational study methods to collect uniform data (clinical and other) to evaluate specified outcomes for a population defined by a particular disease, condition, or exposure, and that serves one or more predetermined scientific, clinical, or policy purposes. A registry database is a file (or files) derived from the registry. Although registries can serve many purposes, this guide focuses on registries created for one or more of the following purposes: to describe the natural history of disease, to determine clinical effectiveness or cost-effectiveness of health care products and services, to measure or monitor safety and harm, and/or to measure quality of care. Registries are classified according to how their populations are defined. For example, product registries include patients who have been exposed to biopharmaceutical products or medical devices. Health services registries consist of patients who have had a common procedure, clinical encounter, or hospitalization. Disease or condition registries are defined by patients having the same diagnosis, such as cystic fibrosis or heart failure. The User’s Guide was created by researchers affiliated with AHRQ’s Effective Health Care Program, particularly those who participated in AHRQ’s DEcIDE (Developing Evidence to Inform Decisions About Effectiveness) program. Chapters were subject to multiple internal and external independent reviews.

Modeling Survival Data: Extending the Cox Model

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Publisher : Springer Science & Business Media
ISBN 13 : 1475732945
Total Pages : 356 pages
Book Rating : 4.4/5 (757 download)

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Book Synopsis Modeling Survival Data: Extending the Cox Model by : Terry M. Therneau

Download or read book Modeling Survival Data: Extending the Cox Model written by Terry M. Therneau and published by Springer Science & Business Media. This book was released on 2013-11-11 with total page 356 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is for statistical practitioners, particularly those who design and analyze studies for survival and event history data. Building on recent developments motivated by counting process and martingale theory, it shows the reader how to extend the Cox model to analyze multiple/correlated event data using marginal and random effects. The focus is on actual data examples, the analysis and interpretation of results, and computation. The book shows how these new methods can be implemented in SAS and S-Plus, including computer code, worked examples, and data sets.

Design and Analysis of DNA Microarray Investigations

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Publisher : Springer Science & Business Media
ISBN 13 : 0387218661
Total Pages : 205 pages
Book Rating : 4.3/5 (872 download)

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Book Synopsis Design and Analysis of DNA Microarray Investigations by : Richard M. Simon

Download or read book Design and Analysis of DNA Microarray Investigations written by Richard M. Simon and published by Springer Science & Business Media. This book was released on 2006-05-09 with total page 205 pages. Available in PDF, EPUB and Kindle. Book excerpt: The analysis of gene expression profile data from DNA micorarray studies are discussed in this book. It provides a review of available methods and presents it in a manner that is intelligible to biologists. It offers an understanding of the design and analysis of experiments utilizing microarrays to benefit scientists. It includes an Appendix tutorial on the use of BRB-ArrayTools and step by step analyses of several major datasets using this software which is available from the National Cancer Institute.

Counting Processes and Survival Analysis

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Publisher : John Wiley & Sons
ISBN 13 : 111815066X
Total Pages : 454 pages
Book Rating : 4.1/5 (181 download)

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Book Synopsis Counting Processes and Survival Analysis by : Thomas R. Fleming

Download or read book Counting Processes and Survival Analysis written by Thomas R. Fleming and published by John Wiley & Sons. This book was released on 2011-09-20 with total page 454 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Wiley-Interscience Paperback Series consists of selected books that have been made more accessible to consumers in an effort to increase global appeal and general circulation. With these new unabridged softcover volumes, Wiley hopes to extend the lives of these works by making them available to future generations of statisticians, mathematicians, and scientists. "The book is a valuable completion of the literature in this field. It is written in an ambitious mathematical style and can be recommended to statisticians as well as biostatisticians." -Biometrische Zeitschrift "Not many books manage to combine convincingly topics from probability theory over mathematical statistics to applied statistics. This is one of them. The book has other strong points to recommend it: it is written with meticulous care, in a lucid style, general results being illustrated by examples from statistical theory and practice, and a bunch of exercises serve to further elucidate and elaborate on the text." -Mathematical Reviews "This book gives a thorough introduction to martingale and counting process methods in survival analysis thereby filling a gap in the literature." -Zentralblatt für Mathematik und ihre Grenzgebiete/Mathematics Abstracts "The authors have performed a valuable service to researchers in providing this material in [a] self-contained and accessible form. . . This text [is] essential reading for the probabilist or mathematical statistician working in the area of survival analysis." -Short Book Reviews, International Statistical Institute Counting Processes and Survival Analysis explores the martingale approach to the statistical analysis of counting processes, with an emphasis on the application of those methods to censored failure time data. This approach has proven remarkably successful in yielding results about statistical methods for many problems arising in censored data. A thorough treatment of the calculus of martingales as well as the most important applications of these methods to censored data is offered. Additionally, the book examines classical problems in asymptotic distribution theory for counting process methods and newer methods for graphical analysis and diagnostics of censored data. Exercises are included to provide practice in applying martingale methods and insight into the calculus itself.

The Statistical Analysis of Failure Time Data

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Publisher : John Wiley & Sons
ISBN 13 : 1118031237
Total Pages : 462 pages
Book Rating : 4.1/5 (18 download)

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Book Synopsis The Statistical Analysis of Failure Time Data by : John D. Kalbfleisch

Download or read book The Statistical Analysis of Failure Time Data written by John D. Kalbfleisch and published by John Wiley & Sons. This book was released on 2011-01-25 with total page 462 pages. Available in PDF, EPUB and Kindle. Book excerpt: Contains additional discussion and examples on left truncationas well as material on more general censoring and truncationpatterns. Introduces the martingale and counting process formulation swillbe in a new chapter. Develops multivariate failure time data in a separate chapterand extends the material on Markov and semi Markovformulations. Presents new examples and applications of data analysis.

Pragmatics of Uncertainty

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Publisher : CRC Press
ISBN 13 : 1315353814
Total Pages : 312 pages
Book Rating : 4.3/5 (153 download)

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Book Synopsis Pragmatics of Uncertainty by : Joseph B. Kadane

Download or read book Pragmatics of Uncertainty written by Joseph B. Kadane and published by CRC Press. This book was released on 2016-10-14 with total page 312 pages. Available in PDF, EPUB and Kindle. Book excerpt: A fair question to ask of an advocate of subjective Bayesianism (which the author is) is "how would you model uncertainty?" In this book, the author writes about how he has done it using real problems from the past, and offers additional comments about the context in which he was working.

Methods for Measuring the Toxicity and Bioaccumulation of Sediment-associated Contaminants with Freshwater Invertebrates

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Publisher :
ISBN 13 :
Total Pages : 220 pages
Book Rating : 4.:/5 (31 download)

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Book Synopsis Methods for Measuring the Toxicity and Bioaccumulation of Sediment-associated Contaminants with Freshwater Invertebrates by :

Download or read book Methods for Measuring the Toxicity and Bioaccumulation of Sediment-associated Contaminants with Freshwater Invertebrates written by and published by . This book was released on 2000 with total page 220 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Bayesian Reinforcement Learning

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Publisher :
ISBN 13 : 9781680830880
Total Pages : 146 pages
Book Rating : 4.8/5 (38 download)

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Book Synopsis Bayesian Reinforcement Learning by : Mohammad Ghavamzadeh

Download or read book Bayesian Reinforcement Learning written by Mohammad Ghavamzadeh and published by . This book was released on 2015-11-18 with total page 146 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bayesian methods for machine learning have been widely investigated, yielding principled methods for incorporating prior information into inference algorithms. This monograph provides the reader with an in-depth review of the role of Bayesian methods for the reinforcement learning (RL) paradigm. The major incentives for incorporating Bayesian reasoning in RL are that it provides an elegant approach to action-selection (exploration/exploitation) as a function of the uncertainty in learning, and it provides a machinery to incorporate prior knowledge into the algorithms. Bayesian Reinforcement Learning: A Survey first discusses models and methods for Bayesian inference in the simple single-step Bandit model. It then reviews the extensive recent literature on Bayesian methods for model-based RL, where prior information can be expressed on the parameters of the Markov model. It also presents Bayesian methods for model-free RL, where priors are expressed over the value function or policy class. Bayesian Reinforcement Learning: A Survey is a comprehensive reference for students and researchers with an interest in Bayesian RL algorithms and their theoretical and empirical properties.

Common Errors in Statistics (and How to Avoid Them)

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Publisher : John Wiley & Sons
ISBN 13 : 1118211278
Total Pages : 231 pages
Book Rating : 4.1/5 (182 download)

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Book Synopsis Common Errors in Statistics (and How to Avoid Them) by : Phillip I. Good

Download or read book Common Errors in Statistics (and How to Avoid Them) written by Phillip I. Good and published by John Wiley & Sons. This book was released on 2011-09-20 with total page 231 pages. Available in PDF, EPUB and Kindle. Book excerpt: Praise for the Second Edition "All statistics students and teachers will find in this book a friendly and intelligentguide to . . . applied statistics in practice." —Journal of Applied Statistics ". . . a very engaging and valuable book for all who use statistics in any setting." —CHOICE ". . . a concise guide to the basics of statistics, replete with examples . . . a valuablereference for more advanced statisticians as well." —MAA Reviews Now in its Third Edition, the highly readable Common Errors in Statistics (and How to Avoid Them) continues to serve as a thorough and straightforward discussion of basic statistical methods, presentations, approaches, and modeling techniques. Further enriched with new examples and counterexamples from the latest research as well as added coverage of relevant topics, this new edition of the benchmark book addresses popular mistakes often made in data collection and provides an indispensable guide to accurate statistical analysis and reporting. The authors' emphasis on careful practice, combined with a focus on the development of solutions, reveals the true value of statistics when applied correctly in any area of research. The Third Edition has been considerably expanded and revised to include: A new chapter on data quality assessment A new chapter on correlated data An expanded chapter on data analysis covering categorical and ordinal data, continuous measurements, and time-to-event data, including sections on factorial and crossover designs Revamped exercises with a stronger emphasis on solutions An extended chapter on report preparation New sections on factor analysis as well as Poisson and negative binomial regression Providing valuable, up-to-date information in the same user-friendly format as its predecessor, Common Errors in Statistics (and How to Avoid Them), Third Edition is an excellent book for students and professionals in industry, government, medicine, and the social sciences.

Core Statistics

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Publisher : Cambridge University Press
ISBN 13 : 1107071054
Total Pages : 259 pages
Book Rating : 4.1/5 (7 download)

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Book Synopsis Core Statistics by : Simon N. Wood

Download or read book Core Statistics written by Simon N. Wood and published by Cambridge University Press. This book was released on 2015-04-13 with total page 259 pages. Available in PDF, EPUB and Kindle. Book excerpt: Core Statistics is a compact starter course on the theory, models, and computational tools needed to make informed use of powerful statistical methods.

Applied Predictive Modeling

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Publisher : Springer Science & Business Media
ISBN 13 : 1461468493
Total Pages : 595 pages
Book Rating : 4.4/5 (614 download)

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Book Synopsis Applied Predictive Modeling by : Max Kuhn

Download or read book Applied Predictive Modeling written by Max Kuhn and published by Springer Science & Business Media. This book was released on 2013-05-17 with total page 595 pages. Available in PDF, EPUB and Kindle. Book excerpt: Applied Predictive Modeling covers the overall predictive modeling process, beginning with the crucial steps of data preprocessing, data splitting and foundations of model tuning. The text then provides intuitive explanations of numerous common and modern regression and classification techniques, always with an emphasis on illustrating and solving real data problems. The text illustrates all parts of the modeling process through many hands-on, real-life examples, and every chapter contains extensive R code for each step of the process. This multi-purpose text can be used as an introduction to predictive models and the overall modeling process, a practitioner’s reference handbook, or as a text for advanced undergraduate or graduate level predictive modeling courses. To that end, each chapter contains problem sets to help solidify the covered concepts and uses data available in the book’s R package. This text is intended for a broad audience as both an introduction to predictive models as well as a guide to applying them. Non-mathematical readers will appreciate the intuitive explanations of the techniques while an emphasis on problem-solving with real data across a wide variety of applications will aid practitioners who wish to extend their expertise. Readers should have knowledge of basic statistical ideas, such as correlation and linear regression analysis. While the text is biased against complex equations, a mathematical background is needed for advanced topics.

Applied Survival Analysis

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Publisher : John Wiley & Sons
ISBN 13 : 1118211588
Total Pages : 285 pages
Book Rating : 4.1/5 (182 download)

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Book Synopsis Applied Survival Analysis by : David W. Hosmer, Jr.

Download or read book Applied Survival Analysis written by David W. Hosmer, Jr. and published by John Wiley & Sons. This book was released on 2011-09-23 with total page 285 pages. Available in PDF, EPUB and Kindle. Book excerpt: THE MOST PRACTICAL, UP-TO-DATE GUIDE TO MODELLING AND ANALYZING TIME-TO-EVENT DATA—NOW IN A VALUABLE NEW EDITION Since publication of the first edition nearly a decade ago, analyses using time-to-event methods have increase considerably in all areas of scientific inquiry mainly as a result of model-building methods available in modern statistical software packages. However, there has been minimal coverage in the available literature to9 guide researchers, practitioners, and students who wish to apply these methods to health-related areas of study. Applied Survival Analysis, Second Edition provides a comprehensive and up-to-date introduction to regression modeling for time-to-event data in medical, epidemiological, biostatistical, and other health-related research. This book places a unique emphasis on the practical and contemporary applications of regression modeling rather than the mathematical theory. It offers a clear and accessible presentation of modern modeling techniques supplemented with real-world examples and case studies. Key topics covered include: variable selection, identification of the scale of continuous covariates, the role of interactions in the model, assessment of fit and model assumptions, regression diagnostics, recurrent event models, frailty models, additive models, competing risk models, and missing data. Features of the Second Edition include: Expanded coverage of interactions and the covariate-adjusted survival functions The use of the Worchester Heart Attack Study as the main modeling data set for illustrating discussed concepts and techniques New discussion of variable selection with multivariable fractional polynomials Further exploration of time-varying covariates, complex with examples Additional treatment of the exponential, Weibull, and log-logistic parametric regression models Increased emphasis on interpreting and using results as well as utilizing multiple imputation methods to analyze data with missing values New examples and exercises at the end of each chapter Analyses throughout the text are performed using Stata® Version 9, and an accompanying FTP site contains the data sets used in the book. Applied Survival Analysis, Second Edition is an ideal book for graduate-level courses in biostatistics, statistics, and epidemiologic methods. It also serves as a valuable reference for practitioners and researchers in any health-related field or for professionals in insurance and government.

Regression Modeling Strategies

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Publisher : Springer Science & Business Media
ISBN 13 : 147573462X
Total Pages : 583 pages
Book Rating : 4.4/5 (757 download)

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Book Synopsis Regression Modeling Strategies by : Frank E. Harrell

Download or read book Regression Modeling Strategies written by Frank E. Harrell and published by Springer Science & Business Media. This book was released on 2013-03-09 with total page 583 pages. Available in PDF, EPUB and Kindle. Book excerpt: Many texts are excellent sources of knowledge about individual statistical tools, but the art of data analysis is about choosing and using multiple tools. Instead of presenting isolated techniques, this text emphasizes problem solving strategies that address the many issues arising when developing multivariable models using real data and not standard textbook examples. It includes imputation methods for dealing with missing data effectively, methods for dealing with nonlinear relationships and for making the estimation of transformations a formal part of the modeling process, methods for dealing with "too many variables to analyze and not enough observations," and powerful model validation techniques based on the bootstrap. This text realistically deals with model uncertainty and its effects on inference to achieve "safe data mining".

Medical Statistics at a Glance

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Publisher : John Wiley & Sons
ISBN 13 : 1119167817
Total Pages : 211 pages
Book Rating : 4.1/5 (191 download)

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Book Synopsis Medical Statistics at a Glance by : Aviva Petrie

Download or read book Medical Statistics at a Glance written by Aviva Petrie and published by John Wiley & Sons. This book was released on 2019-09-30 with total page 211 pages. Available in PDF, EPUB and Kindle. Book excerpt: Now in its fourth edition, Medical Statistics at a Glance is a concise and accessible introduction to this complex subject. It provides clear instruction on how to apply commonly used statistical procedures in an easy-to-read, comprehensive and relevant volume. This new edition continues to be the ideal introductory manual and reference guide to medical statistics, an invaluable companion for statistics lectures and a very useful revision aid. This new edition of Medical Statistics at a Glance: Offers guidance on the practical application of statistical methods in conducting research and presenting results Explains the underlying concepts of medical statistics and presents the key facts without being unduly mathematical Contains succinct self-contained chapters, each with one or more examples, many of them new, to illustrate the use of the methodology described in the chapter. Now provides templates for critical appraisal, checklists for the reporting of randomized controlled trials and observational studies and references to the EQUATOR guidelines for the presentation of study results for many other types of study Includes extensive cross-referencing, flowcharts to aid the choice of appropriate tests, learning objectives for each chapter, a glossary of terms and a glossary of annotated full computer output relevant to the examples in the text Provides cross-referencing to the multiple choice and structured questions in the companion Medical Statistics at a Glance Workbook Medical Statistics at a Glance is a must-have text for undergraduate and post-graduate medical students, medical researchers and biomedical and pharmaceutical professionals.