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Stochastic Dynamics Of Reacting Biomolecules
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Book Synopsis Stochastic Dynamics Of Reacting Biomolecules by : Werner Ebeling
Download or read book Stochastic Dynamics Of Reacting Biomolecules written by Werner Ebeling and published by World Scientific. This book was released on 2003-01-29 with total page 343 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is a book about the physical processes in reacting complex molecules, particularly biomolecules. In the past decade scientists from different fields such as medicine, biology, chemistry and physics have collected a huge amount of data about the structure, dynamics and functioning of biomolecules. Great progress has been achieved in exploring the structure of complex molecules. However, there is still a lack of understanding of the dynamics and functioning of biological macromolecules. In particular this refers to enzymes, which are the basic molecular machines working in living systems. This book contributes to the exploration of the physical mechanisms of these processes, focusing on critical aspects such as the role of nonlinear excitations and of stochastic effects. An extensive range of original results has been obtained in the last few years by the authors, and these results are presented together with a comprehensive survey of the state of the art in the field.
Book Synopsis IUTAM Symposium on Nonlinear Stochastic Dynamics and Control by : W.Q. Zhu
Download or read book IUTAM Symposium on Nonlinear Stochastic Dynamics and Control written by W.Q. Zhu and published by Springer Science & Business Media. This book was released on 2011-03-07 with total page 331 pages. Available in PDF, EPUB and Kindle. Book excerpt: Non-linear stochastic systems are at the center of many engineering disciplines and progress in theoretical research had led to a better understanding of non-linear phenomena. This book provides information on new fundamental results and their applications which are beginning to appear across the entire spectrum of mechanics. The outstanding points of these proceedings are Coherent compendium of the current state of modelling and analysis of non-linear stochastic systems from engineering, applied mathematics and physics point of view. Subject areas include: Multiscale phenomena, stability and bifurcations, control and estimation, computational methods and modelling. For the Engineering and Physics communities, this book will provide first-hand information on recent mathematical developments. The applied mathematics community will benefit from the modelling and information on various possible applications.
Book Synopsis Computational Chemistry by : Jerzy Leszczynski
Download or read book Computational Chemistry written by Jerzy Leszczynski and published by World Scientific. This book was released on 2005 with total page 260 pages. Available in PDF, EPUB and Kindle. Book excerpt: "Vast progress in the area of computational chemistry has been achieved in the last decade. Theoretical methods such as quantum mechanics, molecular dynamics and statistical mechanics have been successfully used to characterize chemical systems and to design new materials, drugs and chemicals. The reviews presented in this volume discuss the current advances in computational methodologies and their applications. The areas covered include materials science, nanotechnology, inorganic and biological systems. The major thrust of the book is to bring timely overviews of new findings and methods applied in the rapidly changing field of computational chemistry."--BOOK JACKET.
Book Synopsis Computational Chemistry: Reviews Of Current Trends, Vol. 9 by : Jerzy Leszczynski
Download or read book Computational Chemistry: Reviews Of Current Trends, Vol. 9 written by Jerzy Leszczynski and published by World Scientific. This book was released on 2005-05-30 with total page 258 pages. Available in PDF, EPUB and Kindle. Book excerpt: Vast progress in the area of computational chemistry has been achieved in the last decade. Theoretical methods such as quantum mechanics, molecular dynamics and statistical mechanics have been successfully used to characterize chemical systems and to design new materials, drugs and chemicals. The reviews presented in this volume discuss the current advances in computational methodologies and their applications. The areas covered include materials science, nanotechnology, inorganic and biological systems. The major thrust of the book is to bring timely overviews of new findings and methods applied in the rapidly changing field of computational chemistry.
Book Synopsis Statistical Thermodynamics And Stochastic Theory Of Nonequilibrium Systems by : Werner Ebeling
Download or read book Statistical Thermodynamics And Stochastic Theory Of Nonequilibrium Systems written by Werner Ebeling and published by World Scientific Publishing Company. This book was released on 2005-09-23 with total page 342 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents both the fundamentals and the major research topics in statistical physics of systems out of equilibrium. It summarizes different approaches to describe such systems on the thermodynamic and stochastic levels, and discusses a variety of areas including reactions, anomalous kinetics, and the behavior of self-propelling particles.
Book Synopsis Cellular Oscillatory Mechanisms by : Miguel Maroto
Download or read book Cellular Oscillatory Mechanisms written by Miguel Maroto and published by Springer Science & Business Media. This book was released on 2008-12-19 with total page 166 pages. Available in PDF, EPUB and Kindle. Book excerpt: Oscillatory dynamics are a central feature of a wide range of biological processes. This text fully explores cellular oscillations, focusing particularly on elucidating the basic mechanisms that underlie these oscillations.
Book Synopsis Stochastic Modelling of Reaction–Diffusion Processes by : Radek Erban
Download or read book Stochastic Modelling of Reaction–Diffusion Processes written by Radek Erban and published by Cambridge University Press. This book was released on 2020-01-30 with total page 322 pages. Available in PDF, EPUB and Kindle. Book excerpt: This practical introduction to stochastic reaction-diffusion modelling is based on courses taught at the University of Oxford. The authors discuss the essence of mathematical methods which appear (under different names) in a number of interdisciplinary scientific fields bridging mathematics and computations with biology and chemistry. The book can be used both for self-study and as a supporting text for advanced undergraduate or beginning graduate-level courses in applied mathematics. New mathematical approaches are explained using simple examples of biological models, which range in size from simulations of small biomolecules to groups of animals. The book starts with stochastic modelling of chemical reactions, introducing stochastic simulation algorithms and mathematical methods for analysis of stochastic models. Different stochastic spatio-temporal models are then studied, including models of diffusion and stochastic reaction-diffusion modelling. The methods covered include molecular dynamics, Brownian dynamics, velocity jump processes and compartment-based (lattice-based) models.
Download or read book Biodiversity written by Oscar Grillo and published by BoD – Books on Demand. This book was released on 2014-05-14 with total page 382 pages. Available in PDF, EPUB and Kindle. Book excerpt: The current world biodiversity consists of an inestimable amount of living forms, that at all levels, from genes to biomes, from individuals to populations, from species to communities, are in constant pursuit of the best strategies to react to the natural and anthropic environmental changes. The arrangement of new and dynamic ecosystems balanced by the formation and the vanishing of species, is the direct consequence of these changes. This book contains comprehensive overviews and original studies focused on ecological and ecosystem functioning studies, hazards and conservation management, assessment of environmental variables affecting species diversity, also considering species richness and distribution, in order to identify the best management strategies to face and solve the conservation problems.
Book Synopsis Terahertz Biomedical Science and Technology by : Joo-Hiuk Son
Download or read book Terahertz Biomedical Science and Technology written by Joo-Hiuk Son and published by CRC Press. This book was released on 2014-06-13 with total page 382 pages. Available in PDF, EPUB and Kindle. Book excerpt: A number of applications including scientific spectroscopy, security screening, and medical imaging have benefitted from the development and utilization of new and emerging terahertz (THz) generation and detection techniques. Exploring recent discoveries and the advancements of biological behaviors through THz spectroscopy and imaging and the development of THz medical techniques, Terahertz Biomedical Science and Technology contains contributions from scientists and researchers in the terahertz biomedical field and is exclusively dedicated to new and emerging terahertz biomedical research and applications. This text offers an assessment of terahertz technology, and provides a compilation of fundamental biological studies conducted using terahertz waves. It introduces THz electromagnetic waves as a new tool for convergent studies, includes laser-based generation techniques and solid-state devices, contains a number of detectors, and discusses high-field generation methods. The material covers recent advancements in terahertz imaging for medical applications—most specifically in cancer diagnosis—reviewing the current status of the THz imaging technique for diagnosing cancers, and exploring the potential medical applications of THz radiation. It also considers the development of future medical applications using terahertz technology. Summarizes the recent progress made in THz waveguides, which are absolutely essential in the development of THz endoscopes Describes the dynamic imaging of drug absorption in skin, exploiting the sensitivity of THz waves to pharmaceutical materials Explores the principle and applications of THz molecular imaging techniques using nanoparticle probes Scientists and engineers involved in biological research and medical applications using optical techniques, as well as graduate students and instructors in optics, physics, electrical engineering, biology, chemistry, and medicine can benefit from this text which highlights new and emerging biomedical studies utilizing novel THz wave techniques.
Author :Sergey M. Bezrukov Publisher :SPIE-International Society for Optical Engineering ISBN 13 :9780819449702 Total Pages :384 pages Book Rating :4.4/5 (497 download)
Book Synopsis Fluctuations and Noise in Biological, Biophysical, and Biomedical Systems by : Sergey M. Bezrukov
Download or read book Fluctuations and Noise in Biological, Biophysical, and Biomedical Systems written by Sergey M. Bezrukov and published by SPIE-International Society for Optical Engineering. This book was released on 2003 with total page 384 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Structure, Dynamics and Function of Biological Macromolecules and Assemblies by : Joseph D. Puglisi
Download or read book Structure, Dynamics and Function of Biological Macromolecules and Assemblies written by Joseph D. Puglisi and published by . This book was released on 2005 with total page 204 pages. Available in PDF, EPUB and Kindle. Book excerpt: Proceedings of the International School of Structural Biology and Magnetic Resonance, held at Erice, Italy, in 2003.
Book Synopsis Efficient Control and Spontaneous Transitions by : Miranda Louwerse
Download or read book Efficient Control and Spontaneous Transitions written by Miranda Louwerse and published by Springer Nature. This book was released on 2023-12-02 with total page 123 pages. Available in PDF, EPUB and Kindle. Book excerpt: This thesis addresses deep questions that cut to the physical and informational essence of central chemical quantities such as transition paths and reaction mechanisms and proposes fundamental new connections between transition-path theory, linear-response theory, nonequilibrium thermodynamics, and information theory. The author investigates slow, energetically efficient driving protocols that drive a system between conformations corresponding to endpoints of a reaction, aiming to find connections between principles of efficient driving and the spontaneous transition mechanism in the absence of driving. First, an alternative perspective of transition-path theory is developed that unifies it with stochastic thermodynamics to describe flows of entropy, energy, and information during the reaction. This also provides an optimization criterion for selecting collective variables. Next, protocols are designed which invert the magnetization of a 3×3 Ising model with minimal energetic cost, and it is determined that using multiple control parameters allows the system to be driven along a fast-relaxing pathway between reaction endpoints. Finally, the author compares these protocols with the spontaneous transition mechanism for magnetization inversion in the same Ising model, finding that designed protocols capture general features of the spontaneous mechanism and energetics given the constraints on the control parameters. This work represents a major step forward in our understanding of rare events and provides a basis for investigating the connection between efficient protocols and spontaneous transition mechanisms which can be further probed in a wider variety of systems.
Book Synopsis Nonequilibrium Thermodynamics by : Yasar Demirel
Download or read book Nonequilibrium Thermodynamics written by Yasar Demirel and published by Newnes. This book was released on 2013-12-16 with total page 787 pages. Available in PDF, EPUB and Kindle. Book excerpt: Natural phenomena consist of simultaneously occurring transport processes and chemical reactions. These processes may interact with each other and may lead to self-organized structures, fluctuations, instabilities, and evolutionary systems. Nonequilibrium Thermodynamics, Third Edition emphasizes the unifying role of thermodynamics in analyzing the natural phenomena. This third edition updates and expands on the first and second editions by focusing on the general balance equations for coupled processes of physical, chemical, and biological systems. The new edition contains a new chapter on stochastic approaches to include the statistical thermodynamics, mesoscopic nonequilibrium thermodynamics, fluctuation theory, information theory, and modeling the coupled biochemical systems in thermodynamic analysis. This new addition also comes with more examples and practice problems. - Informs and updates on all the latest developments in the field - Contributions from leading authorities and industry experts - A useful text for seniors and graduate students from diverse engineering and science programs to analyze some nonequilibrium, coupled, evolutionary, stochastic, and dissipative processes - Highlights fundamentals of equilibrium thermodynamics, transport processes and chemical reactions - Expands the theory of nonequilibrium thermodynamics and its use in coupled transport processes and chemical reactions in physical, chemical, and biological systems - Presents a unified analysis for transport and rate processes in various time and space scales - Discusses stochastic approaches in thermodynamic analysis including fluctuation and information theories - Has 198 fully solved examples and 287 practice problems - An Instructor Resource containing the Solution Manual can be obtained from the author: [email protected]
Book Synopsis Synergetics — From Microscopic to Macroscopic Order by : E. Frehland
Download or read book Synergetics — From Microscopic to Macroscopic Order written by E. Frehland and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 265 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume contains the papers presented at the International Symposium on "Synergetics - From Microscopic to Macroscopic Order", held at the Wissenschafts kolleg z~ Berlin (Institute for Advanced Study Berlin), on July 4-8, 1983. Further more, it contains a contribution of T. Ohta, who unfortunately could not partici pate in this meeting, on the evolution of mUltigene families. The papers discuss the evolution and the function of ordered structures from small microscopic scales up to large macroscopic dimensions. On the one hand, these structures derive from physical or biological systems; on the other hand, they also affect economic, sociological and philosophical questions. I would like to thank the Wissenschaftskolleg zu Berlin for the extraordinary support and hospitality during my one year's stay there as a fellow, which made the planning, preparation and organization of this symposium possible. I would also like to acknowledge the work of B. Fritsch and D. Dorner who actively participated in this undertaking. I am grateful to Professor Haken, the founder of synergetics, whose participation in the planning and styling of the concept of the conference was essential. I am especially thankful to Mrs. U. Monigatti for her indefatigable help with the prep aration and organization of the conference. The financial support was provided by the "Deutsche Forschungsgemeinschaft". Berlin, November 1983 E. Frehland Contents Some Introductory Remarks on Synergetics By H. Haken ...
Book Synopsis Biomedical Index to PHS-supported Research by :
Download or read book Biomedical Index to PHS-supported Research written by and published by . This book was released on 1987 with total page 1398 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Computational Methods to Study the Structure and Dynamics of Biomolecules and Biomolecular Processes by : Adam Liwo
Download or read book Computational Methods to Study the Structure and Dynamics of Biomolecules and Biomolecular Processes written by Adam Liwo and published by Springer. This book was released on 2018-12-19 with total page 849 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides a comprehensive overview of modern computer-based techniques for analyzing the structure, properties and dynamics of biomolecules and biomolecular processes. It is organized in four main parts; the first one deals with methodology of molecular simulations; the second one with applications of molecular simulations; the third one introduces bioinformatics methods and the use of experimental information in molecular simulations; the last part reports on selected applications of molecular quantum mechanics. This second edition has been thoroughly revised and updated to include the latest progresses made in the respective field of research.
Book Synopsis Modeling Biomolecular Networks in Cells by : Luonan Chen
Download or read book Modeling Biomolecular Networks in Cells written by Luonan Chen and published by Springer Science & Business Media. This book was released on 2010-07-05 with total page 343 pages. Available in PDF, EPUB and Kindle. Book excerpt: Modeling Biomolecular Networks in Cells shows how the interaction between the molecular components of basic living organisms can be modelled mathematically and the models used to create artificial biological entities within cells. Such forward engineering is a difficult task but the nonlinear dynamical methods espoused in this book simplify the biology so that it can be successfully understood and the synthesis of simple biological oscillators and rhythm-generators made feasible. Such simple units can then be co-ordinated using intercellular signal biomolecules. The formation of such man-made multicellular networks with a view to the production of biosensors, logic gates, new forms of integrated circuitry based on "gene-chips" and even biological computers is an important step in the design of faster and more flexible "electronics". The book also provides theoretical frameworks and tools with which to analyze the nonlinear dynamical phenomena which arise from the connection of building units in a biomolecular network.
