Using R for Modelling and Quantitative Methods in Fisheries

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Author :
Publisher : CRC Press
ISBN 13 : 1000079279
Total Pages : 329 pages
Book Rating : 4.0/5 ( download)

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Book Synopsis Using R for Modelling and Quantitative Methods in Fisheries by : Malcolm Haddon

Download or read book Using R for Modelling and Quantitative Methods in Fisheries written by Malcolm Haddon and published by CRC Press. This book was released on 2020-08-27 with total page 329 pages. Available in PDF, EPUB and Kindle. Book excerpt: Using R for Modelling and Quantitative Methods in Fisheries has evolved and been adapted from an earlier book by the same author and provides a detailed introduction to analytical methods commonly used by fishery scientists, ecologists, and advanced students using the open-source software R as a programming tool. Some knowledge of R is assumed, as this is a book about using R, but an introduction to the development and working of functions, and how one can explore the contents of R functions and packages, is provided. The example analyses proceed step-by-step using code listed in the book and from the book’s companion R package, MQMF, available from GitHub and the standard archive, CRAN. The examples are designed to be simple to modify so the reader can quickly adapt the methods described to use with their own data. A primary aim of the book is to be a useful resource to natural resource practitioners and students. Featured Chapters: Model Parameter Estimation provides a detailed explanation of the requirements and steps involved in fitting models to data, using R and, mainly, maximum likelihood methods. On Uncertainty uses R to implement bootstrapping, likelihood profiles, asymptotic errors, and Bayesian posteriors to characterize any uncertainty in an analysis. The use of the Monte Carlo Markov Chain methodology is examined in some detail. Surplus Production Models applies all the methods examined in the earlier parts of the book to conducting a stock assessment. This included fitting alternative models to the available data, characterizing the uncertainty in different ways, and projecting the optimum models forward in time as the basis for providing useful management advice.

Analysis and Interpretation of Freshwater Fisheries Data

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Publisher : Amer Fisheries Society
ISBN 13 : 9781888569773
Total Pages : 961 pages
Book Rating : 4.5/5 (697 download)

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Book Synopsis Analysis and Interpretation of Freshwater Fisheries Data by : Michael Lee Brown

Download or read book Analysis and Interpretation of Freshwater Fisheries Data written by Michael Lee Brown and published by Amer Fisheries Society. This book was released on 2007 with total page 961 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Fisheries Techniques

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Publisher :
ISBN 13 :
Total Pages : 760 pages
Book Rating : 4.3/5 (91 download)

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Book Synopsis Fisheries Techniques by : Brian R. Murphy

Download or read book Fisheries Techniques written by Brian R. Murphy and published by . This book was released on 1996 with total page 760 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Improving Fish Stock Assessments

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Publisher : National Academies Press
ISBN 13 : 0309174406
Total Pages : 194 pages
Book Rating : 4.3/5 (91 download)

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Book Synopsis Improving Fish Stock Assessments by : National Research Council

Download or read book Improving Fish Stock Assessments written by National Research Council and published by National Academies Press. This book was released on 1998-02-27 with total page 194 pages. Available in PDF, EPUB and Kindle. Book excerpt: Ocean harvests have plateaued worldwide and many important commercial stocks have been depleted. This has caused great concern among scientists, fishery managers, the fishing community, and the public. This book evaluates the major models used for estimating the size and structure of marine fish populations (stock assessments) and changes in populations over time. It demonstrates how problems that may occur in fisheries dataâ€"for example underreporting or changes in the likelihood that fish can be caught with a given type of gearâ€"can seriously degrade the quality of stock assessments. The volume makes recommendations for means to improve stock assessments and their use in fishery management.

Modelling and Quantitative Methods in Fisheries

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Publisher : CRC Press
ISBN 13 : 9781584881773
Total Pages : 428 pages
Book Rating : 4.8/5 (817 download)

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Book Synopsis Modelling and Quantitative Methods in Fisheries by : Malcolm Haddon

Download or read book Modelling and Quantitative Methods in Fisheries written by Malcolm Haddon and published by CRC Press. This book was released on 2001-05-31 with total page 428 pages. Available in PDF, EPUB and Kindle. Book excerpt: Quantitative methods and mathematical modelling are of critical importance to fishery science and management but, until now, there has been no book that offers the sharp focus, methodological detail, and practical examples needed by non-specialist fishery scientists and managers, and ecologists. Modelling and Quantitative Methods in Fisheries fills that void. To date, methodology books in fisheries science have been limited to cookbook approach to problems; simple compilations; or expositions in which either too much theory or insufficient methodological detail is given. The text is organized into three sections: an introduction to modelling in fisheries and ecology, a straight methodology section covering a range of methods, and a section focusing on specific fields in fisheries science. This book is timely as it addresses a topic of recent debate in fisheries and ecology, describing and comparing the uses of Least Squares, Maximum Likelihood, and Bayesian quantitative methods. Designed as stand-alone units, each chapter provides examples from both classic and recent literature and comes with dedicated Excel spreadsheets that permit you to delve into every detail of the analysis. All of these spreadsheets serve as active examples, which can easily be modified and customized and can be used as templates for analyzing your own data. The spreadsheets permit you to learn at your own speed and cover the simplest linear regression to the more complex non-linear modelling using maximum likelihood. Data analysis and modelling are best learned by doing and not just by reading. This book illustrates, step by step, the analyses it covers. More detailed in terms of introductory quantitative methods and modelling as applied to fisheries than any other book available, Modelling and Quantitative Methods in Fisheries gives you the advantage by supplying the full details of the analysis so that understanding the material is a matter of following the book.

Quantitatively Defining Biological and Economic Reference Points in Data Poor Fisheries

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Author :
Publisher :
ISBN 13 : 9780643109995
Total Pages : 306 pages
Book Rating : 4.1/5 (99 download)

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Book Synopsis Quantitatively Defining Biological and Economic Reference Points in Data Poor Fisheries by : Shijie Zhou

Download or read book Quantitatively Defining Biological and Economic Reference Points in Data Poor Fisheries written by Shijie Zhou and published by . This book was released on 2013 with total page 306 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Global Atlas of Marine Fisheries

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Publisher : Island Press
ISBN 13 : 1610917693
Total Pages : 519 pages
Book Rating : 4.6/5 (19 download)

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Book Synopsis Global Atlas of Marine Fisheries by : Daniel Pauly

Download or read book Global Atlas of Marine Fisheries written by Daniel Pauly and published by Island Press. This book was released on 2016-10-06 with total page 519 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Global Atlas of Marine Fisheries is the first and only book to provide accurate, country-by-country fishery catch data. This groundbreaking information has been gathered from independent sources by the world's foremost fisheries experts. Edited by Daniel Pauly and Dirk Zeller of the Sea Around Us Project, the Atlas includes one-page reports on 273 countries and their territories, plus fourteen topical global chapters. Each national report describes the current state of the country's fishery; the policies, politics, and social factors affecting it; and potential solutions. The global chapters address cross-cutting issues, from the economics of fisheries to the impacts of mariculture. Extensive maps and graphics offer attractive and accessible visual representations.

Introductory Fisheries Analyses with R

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Publisher : CRC Press
ISBN 13 : 1482235226
Total Pages : 327 pages
Book Rating : 4.4/5 (822 download)

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Book Synopsis Introductory Fisheries Analyses with R by : Derek H. Ogle

Download or read book Introductory Fisheries Analyses with R written by Derek H. Ogle and published by CRC Press. This book was released on 2016-01-05 with total page 327 pages. Available in PDF, EPUB and Kindle. Book excerpt: A How-To Guide for Conducting Common Fisheries-Related Analyses in R Introductory Fisheries Analyses with R provides detailed instructions on performing basic fisheries stock assessment analyses in the R environment. Accessible to practicing fisheries scientists as well as advanced undergraduate and graduate students, the book demonstrates the flexibility and power of R, offers insight into the reproducibility of script-based analyses, and shows how the use of R leads to more efficient and productive work in fisheries science. The first three chapters present a minimal introduction to the R environment that builds a foundation for the fisheries-specific analyses in the remainder of the book. These chapters help you become familiar with R for basic fisheries analyses and graphics. Subsequent chapters focus on methods to analyze age comparisons, age-length keys, size structure, weight-length relationships, condition, abundance (from capture-recapture and depletion data), mortality rates, individual growth, and the stock-recruit relationship. The fundamental statistical methods of linear regression, analysis of variance (ANOVA), and nonlinear regression are demonstrated within the contexts of these common fisheries analyses. For each analysis, the author completely explains the R functions and provides sufficient background information so that you can confidently implement each method. Web Resource The author’s website at http://derekogle.com/IFAR/ includes the data files and R code for each chapter, enabling you to reproduce the results in the book as well as create your own scripts. The site also offers supplemental code for more advanced analyses and practice exercises for every chapter.

Agriculture, Forestry and Fishery Statistics

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Publisher :
ISBN 13 : 9789276215226
Total Pages : pages
Book Rating : 4.2/5 (152 download)

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Book Synopsis Agriculture, Forestry and Fishery Statistics by : Edward Cook

Download or read book Agriculture, Forestry and Fishery Statistics written by Edward Cook and published by . This book was released on 2020 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Agriculture, forestry and fi shery statistics provides a selection of recent, topical data. Information is presented for the European Union (EU) and its Member States, and is supplemented (when available) with data for the United Kingdom, EFTA members, candidate countries to the EU and potential candidates. This publication aims to cover some of the most popular data within the domain of agriculture, forestry and fi shery statistics as well as some of the wider food chain. It may be viewed as an introduction to European statistics in this area and provides a starting point for those who wish to explore the broad range of data that are freely available on Eurostat's website.

Length-based Methods in Fisheries Research

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Author :
Publisher : WorldFish
ISBN 13 : 9711022281
Total Pages : 463 pages
Book Rating : 4.7/5 (11 download)

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Book Synopsis Length-based Methods in Fisheries Research by : Daniel Pauly

Download or read book Length-based Methods in Fisheries Research written by Daniel Pauly and published by WorldFish. This book was released on 1987 with total page 463 pages. Available in PDF, EPUB and Kindle. Book excerpt: Specific aims of the conference were: to identify the specific features of sampling schemes used to obtain length-frequency data for stock assessment; to review length-based methodologies for stock assessment of fish and aquatic invertebrates, with particular reference to their precision and accuracy; to review and test computer programs implementing length-based methods.

Stock Identification Methods

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Publisher : Academic Press
ISBN 13 : 0123972582
Total Pages : 589 pages
Book Rating : 4.1/5 (239 download)

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Book Synopsis Stock Identification Methods by : Steven X. Cadrin

Download or read book Stock Identification Methods written by Steven X. Cadrin and published by Academic Press. This book was released on 2013-10-04 with total page 589 pages. Available in PDF, EPUB and Kindle. Book excerpt: Stock Identification Methods, 2e, continues to provide a comprehensive review of the various disciplines used to study the population structure of fishery resources. It represents the worldwide experience and perspectives of experts on each method, assembled through a working group of the International Council for the Exploration of the Sea. The book is organized to foster interdisciplinary analyses and conclusions about stock structure, a crucial topic for fishery science and management. Technological advances have promoted the development of stock identification methods in many directions, resulting in a confusing variety of approaches. Based on central tenets of population biology and management needs, this valuable resource offers a unified framework for understanding stock structure by promoting an understanding of the relative merits and sensitivities of each approach. - Describes 18 distinct approaches to stock identification grouped into sections on life history traits, environmental signals, genetic analyses, and applied marks - Features experts' reviews of benchmark case studies, general protocols, and the strengths and weaknesses of each identification method - Reviews statistical techniques for exploring stock patterns, testing for differences among putative stocks, stock discrimination, and stock composition analysis - Focuses on the challenges of interpreting data and managing mixed-stock fisheries

Sampling Methods Applied to Fisheries Science

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Publisher : Food & Agriculture Org.
ISBN 13 : 9789251053973
Total Pages : 102 pages
Book Rating : 4.0/5 (539 download)

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Book Synopsis Sampling Methods Applied to Fisheries Science by : Emygdio L. Cadima

Download or read book Sampling Methods Applied to Fisheries Science written by Emygdio L. Cadima and published by Food & Agriculture Org.. This book was released on 2005 with total page 102 pages. Available in PDF, EPUB and Kindle. Book excerpt: The main objective of this manual is to present the basic and standard concepts of sampling methods applied to fisheries science. In order to ensure sound fisheries research, it is essential to have reliable data from landing ports, fishery stocks and research surveys. A rational management of fishing resources can then be established to ensure a sustainable exploitation rate and responsible fisheries management, providing long-term benefits for all. This document provides an introduction to sampling theory and introduces the theory of the three worlds (population, sample and sampling), as well as a short revision of probability concepts. It also provides an overview of the simple random, random stratified, cluster and two-stage sampling methods. The expressions for estimating the mean and total of the populations, their sampling distributions, the expected values, the sampling variances and their estimates are included and justified for each of the sampling designs. The document also contains a case study of biological sampling from landing ports and exercises that should be used to further understanding of the objectives of sampling and its advantages for fishery resource studies.

Theory and Method of Fisheries Forecasting

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Publisher : Springer Nature
ISBN 13 : 9811929564
Total Pages : 208 pages
Book Rating : 4.8/5 (119 download)

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Book Synopsis Theory and Method of Fisheries Forecasting by : Xinjun Chen

Download or read book Theory and Method of Fisheries Forecasting written by Xinjun Chen and published by Springer Nature. This book was released on 2022-09-07 with total page 208 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book systematically introduces the knowledge system and research results of fisheries forecasting. It is divided into four parts and seven chapters. The first part is the introduction, which mainly introduces the basic concepts, the nature of the subject, and the research contents, as well as the current status of research. The second part is about the basic knowledge of fisheries forecasting, including overview of the world marine environment, fish shoaling and migration distribution, the relationship between fish behavior and marine environment, and the basic theory of forming fishing ground. The third part is the focus of this book, including the basic principles and methods of fisheries forecasting, as well as the application of new techniques and methods in fisheries forecasting. The fourth part is the comprehensive application of fisheries forecasting, including the general situation of world marine fisheries, the impact of global marine environment changes on fisheries resources and fishing ground, and case studying of fisheries forecasting of important economic species, such as oceanic squid, jack mackerel, anchovy, and skipjack. The study of this book will help everyone to master the basic principles and methods of fisheries forecasting, as well as the application of new technologies and methods in important economic species, and lay a foundation for future work in the field of marine fisheries.

Fish Field and Laboratory Methods for Evaluating the Biological Integrity of Surface Waters

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Publisher :
ISBN 13 :
Total Pages : 372 pages
Book Rating : 4.3/5 (121 download)

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Book Synopsis Fish Field and Laboratory Methods for Evaluating the Biological Integrity of Surface Waters by : Donald J. Klemm

Download or read book Fish Field and Laboratory Methods for Evaluating the Biological Integrity of Surface Waters written by Donald J. Klemm and published by . This book was released on 1993 with total page 372 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Sustaining Marine Fisheries

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Publisher : National Academies Press
ISBN 13 : 0309055261
Total Pages : 189 pages
Book Rating : 4.3/5 (9 download)

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Book Synopsis Sustaining Marine Fisheries by : National Research Council

Download or read book Sustaining Marine Fisheries written by National Research Council and published by National Academies Press. This book was released on 1999-03-19 with total page 189 pages. Available in PDF, EPUB and Kindle. Book excerpt: Fluctuations and declines in marine fish populations have caused growing concern among marine scientists, fisheries managers, commercial and recreational fishers, and the public. Sustaining Marine Fisheries explores the nature of marine ecosystems and the complex interacting factors that shape their productivity. The book documents the condition of marine fisheries today, highlighting species and geographic areas that are under particular stress. Challenges to achieving sustainability are discussed, and shortcomings of existing fisheries management and regulation are examined. The volume calls for fisheries management to adopt a broader ecosystem perspective that encompasses all relevant environmental and human influences. Sustaining Marine Fisheries offers new approaches to building workable fisheries management institutions, improving scientific data, and developing management tools. The book recommends ways to change current practices that encourage overexploitation of fish resources. It will be of special interest to marine policymakers and ecologists, fisheries regulators and managers, fisheries scientists and marine ecologists, fishers, and concerned individuals.

Handbook on Collecting Fishery Statistics for Inland and Coastal Fisheries

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Author :
Publisher :
ISBN 13 :
Total Pages : 178 pages
Book Rating : 4.:/5 (318 download)

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Book Synopsis Handbook on Collecting Fishery Statistics for Inland and Coastal Fisheries by :

Download or read book Handbook on Collecting Fishery Statistics for Inland and Coastal Fisheries written by and published by . This book was released on 2004 with total page 178 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Modelling and Quantitative Methods in Fisheries, Second Edition

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Author :
Publisher : CRC Press
ISBN 13 : 1420010816
Total Pages : 468 pages
Book Rating : 4.4/5 (2 download)

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Book Synopsis Modelling and Quantitative Methods in Fisheries, Second Edition by : Malcolm Haddon

Download or read book Modelling and Quantitative Methods in Fisheries, Second Edition written by Malcolm Haddon and published by CRC Press. This book was released on 2010-02-01 with total page 468 pages. Available in PDF, EPUB and Kindle. Book excerpt: Revised and restructured, Modeling and Quantitative Methods in Fisheries, Second Edition provides an accessible introduction to quantitative methods in fisheries. This book features new material on tests and comparisons as well as new chapters on length-based models and estimating uncertainty using Bayesian methods. It presents a structured, step-by-step approach that introduces the material in a logical sequence. This text covers a range of topics such as simple linear regression, complex nonlinear modeling, methodology, and specific fields in fisheries. It also includes numerous real world examples implemented in Excel, with workbooks for all examples available for download on the web.