Biological Data Integration

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Biological Data Integration

Author : Christine Froidevaux
Publisher : John Wiley & Sons
ISBN 13 : 1789450306
Total Pages : 292 pages
Book Rating : 4.7/5 (894 download)

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Book Synopsis Biological Data Integration by : Christine Froidevaux

Download or read book Biological Data Integration written by Christine Froidevaux and published by John Wiley & Sons. This book was released on 2024-01-11 with total page 292 pages. Available in PDF, EPUB and Kindle. Book excerpt: The study of biological data is constantly undergoing profound changes. Firstly, the volume of data available has increased considerably due to new high throughput techniques used for experiments. Secondly, the remarkable progress in both computational and statistical analysis methods and infrastructures has made it possible to process these voluminous data. The resulting challenge concerns our ability to integrate these data, i.e. to use their complementary nature effectively in the hope of advancing our knowledge. Therefore, a major challenge in studying biology today is integrating data for the most exhaustive analysis possible. Biological Data Integration deals in a pedagogical way with research work in biological data science, examining both computational approaches to data integration and statistical approaches to the integration of omics data

Data Integration in the Life Sciences

Author : Sarah Cohen-Boulakia
Publisher : Springer Science & Business Media
ISBN 13 : 3540698272
Total Pages : 221 pages
Book Rating : 4.5/5 (46 download)

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Book Synopsis Data Integration in the Life Sciences by : Sarah Cohen-Boulakia

Download or read book Data Integration in the Life Sciences written by Sarah Cohen-Boulakia and published by Springer Science & Business Media. This book was released on 2008-06-11 with total page 221 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the 5th International Workshop on Data Integration in the Life Sciences, DILS 2008, held in Evry, France in June 2008. The 18 revised full papers presented together with 3 keynote talks and a tutorial paper were carefully reviewed and selected from 54 submissions. The papers adress all current issues in data integration and data management from the life science point of view and are organized in topical sections on Semantic Web for the life sciences, designing and evaluating architectures to integrate biological data, new architectures and experience on using systems, systems using technologies from the Semantic Web for the life sciences, mining integrated biological data, and new features of major resources for biomolecular data.

Multivariate Data Integration Using R

Author : Kim-Anh Lê Cao
Publisher : CRC Press
ISBN 13 : 1000472191
Total Pages : 316 pages
Book Rating : 4.0/5 (4 download)

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Book Synopsis Multivariate Data Integration Using R by : Kim-Anh Lê Cao

Download or read book Multivariate Data Integration Using R written by Kim-Anh Lê Cao and published by CRC Press. This book was released on 2021-11-08 with total page 316 pages. Available in PDF, EPUB and Kindle. Book excerpt: Large biological data, which are often noisy and high-dimensional, have become increasingly prevalent in biology and medicine. There is a real need for good training in statistics, from data exploration through to analysis and interpretation. This book provides an overview of statistical and dimension reduction methods for high-throughput biological data, with a specific focus on data integration. It starts with some biological background, key concepts underlying the multivariate methods, and then covers an array of methods implemented using the mixOmics package in R. Features: Provides a broad and accessible overview of methods for multi-omics data integration Covers a wide range of multivariate methods, each designed to answer specific biological questions Includes comprehensive visualisation techniques to aid in data interpretation Includes many worked examples and case studies using real data Includes reproducible R code for each multivariate method, using the mixOmics package The book is suitable for researchers from a wide range of scientific disciplines wishing to apply these methods to obtain new and deeper insights into biological mechanisms and biomedical problems. The suite of tools introduced in this book will enable students and scientists to work at the interface between, and provide critical collaborative expertise to, biologists, bioinformaticians, statisticians and clinicians.

Data Integration in the Life Sciences

Author : Patrick Lambrix
Publisher : Springer Science & Business Media
ISBN 13 : 3642151191
Total Pages : 224 pages
Book Rating : 4.6/5 (421 download)

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Book Synopsis Data Integration in the Life Sciences by : Patrick Lambrix

Download or read book Data Integration in the Life Sciences written by Patrick Lambrix and published by Springer Science & Business Media. This book was released on 2010-08-11 with total page 224 pages. Available in PDF, EPUB and Kindle. Book excerpt: The development and increasingly widespread deployment of high-throughput experimental methods in the life sciences is giving rise to numerous large, c- plex and valuable data resources. This foundation of experimental data und- pins the systematic study of organismsand diseases, which increasinglydepends on the development of models of biological systems. The development of these models often requires integration of diverse experimental data resources; once constructed, the models themselves become data and present new integration challenges for tasks such as interpretation, validation and comparison. The Data Integration in the Life Sciences (DILS) Conference series brings together data and knowledge management researchers from the computer s- ence research community with bioinformaticians and computational biologists, to improve the understanding of how emerging data integration techniques can address requirements identi?ed in the life sciences. DILS 2010 was the seventh event in the series and was held in Goth- burg, Sweden during August 25–27, 2010. The associated proceedings contain 14 peer-reviewed papers and 2 invited papers. The sessions addressed ontology engineering, and in particular, evolution, matching and debugging of ontologies, akeycomponentforsemanticintegration;Web servicesasanimportanttechn- ogy for data integration in the life sciences; data and text mining techniques for discovering and recognizing biomedical entities and relationships between these entities; and information management, introducing data integration solutions for di?erent types of applications related to cancer, systems biology and - croarray experimental data, and an approach for integrating ranked data in the life sciences.

Data Integration in the Life Sciences

Author : Bertram Ludäscher
Publisher : Springer Science & Business Media
ISBN 13 : 3540279679
Total Pages : 355 pages
Book Rating : 4.5/5 (42 download)

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Book Synopsis Data Integration in the Life Sciences by : Bertram Ludäscher

Download or read book Data Integration in the Life Sciences written by Bertram Ludäscher and published by Springer Science & Business Media. This book was released on 2005-07-08 with total page 355 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the Second International Workshop on Data Integration in the Life Sciences, DILS 2005, held in San Diego, CA, USA in July 2005. The 20 revised full papers presented together with 8 revised posters and demonstration papers, 2 keynote articles and 5 invited position statements were carefully reviewed and selected from 50 initial submissions. The papers are organized in topical sections on user applications, ontologies, data integration, and others and address all current issues in data integration from the life science point of view.

Data Integration in the Life Sciences

Author : Erhard Rahm
Publisher : Springer Science & Business Media
ISBN 13 : 3540213007
Total Pages : 230 pages
Book Rating : 4.5/5 (42 download)

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Book Synopsis Data Integration in the Life Sciences by : Erhard Rahm

Download or read book Data Integration in the Life Sciences written by Erhard Rahm and published by Springer Science & Business Media. This book was released on 2004-03-18 with total page 230 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the First International Workshop on Data Integration in the Life Sciences, DILS 2004, held in Leipzig, Germany, in March 2004. The 13 revised full papers and 2 revised short papers presented were carefully reviewed and selected from many submissions. The papers are organized in topical sections on scientific and clinical workflows, ontologies and taxonomies, indexing and clustering, integration tools and systems, and integration techniques.

Data Integration in the Life Sciences

Author : Sarah Cohen-Boulakia
Publisher : Springer
ISBN 13 : 3540732551
Total Pages : 284 pages
Book Rating : 4.5/5 (47 download)

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Book Synopsis Data Integration in the Life Sciences by : Sarah Cohen-Boulakia

Download or read book Data Integration in the Life Sciences written by Sarah Cohen-Boulakia and published by Springer. This book was released on 2007-06-30 with total page 284 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the 4th International Workshop on Data Integration in the Life Sciences, DILS 2007, held in Philadelphia, PA, USA in July 2007. It covers new architectures and experience on using systems, managing and designing scientific workflows, mapping and matching techniques, modeling of life science data, and annotation in data integration.

Analyzing Network Data in Biology and Medicine

Author : Nataša Pržulj
Publisher : Cambridge University Press
ISBN 13 : 1108432239
Total Pages : 647 pages
Book Rating : 4.1/5 (84 download)

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Book Synopsis Analyzing Network Data in Biology and Medicine by : Nataša Pržulj

Download or read book Analyzing Network Data in Biology and Medicine written by Nataša Pržulj and published by Cambridge University Press. This book was released on 2019-03-28 with total page 647 pages. Available in PDF, EPUB and Kindle. Book excerpt: Introduces biological concepts and biotechnologies producing the data, graph and network theory, cluster analysis and machine learning, using real-world biological and medical examples.

Data Integration in the Life Sciences

Author : Sören Auer
Publisher : Springer
ISBN 13 : 3030060160
Total Pages : 218 pages
Book Rating : 4.0/5 (3 download)

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Book Synopsis Data Integration in the Life Sciences by : Sören Auer

Download or read book Data Integration in the Life Sciences written by Sören Auer and published by Springer. This book was released on 2018-12-29 with total page 218 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes revised selected papers from the 13th International Conference on Data Integration in the Life Sciences, DILS 2018, held in Hannover, Germany, in November 2018. The 5 full, 8 short, 3 poster and 4 demo papers presented in this volume were carefully reviewed and selected from 22 submissions. The papers are organized in topical sections named: big biomedical data integration and management; data exploration in the life sciences; biomedical data analytics; and big biomedical applications.

Methodologies of Multi-Omics Data Integration and Data Mining

Author : Kang Ning
Publisher : Springer Nature
ISBN 13 : 9811982104
Total Pages : 173 pages
Book Rating : 4.8/5 (119 download)

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Book Synopsis Methodologies of Multi-Omics Data Integration and Data Mining by : Kang Ning

Download or read book Methodologies of Multi-Omics Data Integration and Data Mining written by Kang Ning and published by Springer Nature. This book was released on 2023-01-15 with total page 173 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book features multi-omics big-data integration and data-mining techniques. In the omics age, paramount of multi-omics data from various sources is the new challenge we are facing, but it also provides clues for several biomedical or clinical applications. This book focuses on data integration and data mining methods for multi-omics research, which explains in detail and with supportive examples the “What”, “Why” and “How” of the topic. The contents are organized into eight chapters, out of which one is for the introduction, followed by four chapters dedicated for omics integration techniques focusing on several omics data resources and data-mining methods, and three chapters dedicated for applications of multi-omics analyses with application being demonstrated by several data mining methods. This book is an attempt to bridge the gap between the biomedical multi-omics big data and the data-mining techniques for the best practice of contemporary bioinformatics and the in-depth insights for the biomedical questions. It would be of interests for the researchers and practitioners who want to conduct the multi-omics studies in cancer, inflammation disease, and microbiome researches.

Integrating Omics Data

Author : George Tseng
Publisher : Cambridge University Press
ISBN 13 : 1107069114
Total Pages : 497 pages
Book Rating : 4.1/5 (7 download)

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Book Synopsis Integrating Omics Data by : George Tseng

Download or read book Integrating Omics Data written by George Tseng and published by Cambridge University Press. This book was released on 2015-09-23 with total page 497 pages. Available in PDF, EPUB and Kindle. Book excerpt: Tutorial chapters by leaders in the field introduce state-of-the-art methods to handle information integration problems of omics data.

Innovations in Smart Cities Applications Edition 2

Author : Mohamed Ben Ahmed
Publisher : Springer
ISBN 13 : 3030111962
Total Pages : 1234 pages
Book Rating : 4.0/5 (31 download)

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Book Synopsis Innovations in Smart Cities Applications Edition 2 by : Mohamed Ben Ahmed

Download or read book Innovations in Smart Cities Applications Edition 2 written by Mohamed Ben Ahmed and published by Springer. This book was released on 2019-02-06 with total page 1234 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book highlights cutting-edge research presented at the third installment of the International Conference on Smart City Applications (SCA2018), held in Tétouan, Morocco on October 10–11, 2018. It presents original research results, new ideas, and practical lessons learned that touch on all aspects of smart city applications. The respective papers share new and highly original results by leading experts on IoT, Big Data, and Cloud technologies, and address a broad range of key challenges in smart cities, including Smart Education and Intelligent Learning Systems, Smart Healthcare, Smart Building and Home Automation, Smart Environment and Smart Agriculture, Smart Economy and Digital Business, and Information Technologies and Computer Science, among others. In addition, various novel proposals regarding smart cities are discussed. Gathering peer-reviewed chapters written by prominent researchers from around the globe, the book offers an invaluable instructional and research tool for courses on computer and urban sciences; students and practitioners in computer science, information science, technology studies and urban management studies will find it particularly useful. Further, the book is an excellent reference guide for professionals and researchers working in mobility, education, governance, energy, the environment and computer sciences.

Data Integration in the Life Sciences

Author : Norman W. Paton
Publisher : Springer Science & Business Media
ISBN 13 : 3642028799
Total Pages : 230 pages
Book Rating : 4.6/5 (42 download)

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Book Synopsis Data Integration in the Life Sciences by : Norman W. Paton

Download or read book Data Integration in the Life Sciences written by Norman W. Paton and published by Springer Science & Business Media. This book was released on 2009-07-21 with total page 230 pages. Available in PDF, EPUB and Kindle. Book excerpt: Data integration in the life sciences continues to be important but challe- ing. The ongoing development of new experimental methods gives rise to an increasingly wide range of data sets, which in turn must be combined to allow more integrative views of biological systems. Indeed, the growing prominence of systems biology, where mathematical models characterize behaviors observed in experiments of di?erent types, emphasizes the importance of data integration to the life sciences. In this context, the representation of models of biological behavior as data in turn gives rise to challenges relating to provenance, data quality, annotation, etc., all of which are associated with signi?cant research activities within computer science. The Data Integration in the Life Sciences (DILS) Workshop Series brings together data and knowledge management researchers from the computer s- ence research community with bioinformaticians and computational biologists, to improve the understanding of how emerging data integration techniques can address requirements identi?ed in the life sciences.

Catalyzing Inquiry at the Interface of Computing and Biology

Author : National Research Council
Publisher : National Academies Press
ISBN 13 : 030909612X
Total Pages : 469 pages
Book Rating : 4.3/5 (9 download)

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Book Synopsis Catalyzing Inquiry at the Interface of Computing and Biology by : National Research Council

Download or read book Catalyzing Inquiry at the Interface of Computing and Biology written by National Research Council and published by National Academies Press. This book was released on 2006-01-01 with total page 469 pages. Available in PDF, EPUB and Kindle. Book excerpt: Advances in computer science and technology and in biology over the last several years have opened up the possibility for computing to help answer fundamental questions in biology and for biology to help with new approaches to computing. Making the most of the research opportunities at the interface of computing and biology requires the active participation of people from both fields. While past attempts have been made in this direction, circumstances today appear to be much more favorable for progress. To help take advantage of these opportunities, this study was requested of the NRC by the National Science Foundation, the Department of Defense, the National Institutes of Health, and the Department of Energy. The report provides the basis for establishing cross-disciplinary collaboration between biology and computing including an analysis of potential impediments and strategies for overcoming them. The report also presents a wealth of examples that should encourage students in the biological sciences to look for ways to enable them to be more effective users of computing in their studies.

Integrative Bioinformatics

Author : Ming Chen
Publisher : Springer Nature
ISBN 13 : 9811667950
Total Pages : 381 pages
Book Rating : 4.8/5 (116 download)

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Book Synopsis Integrative Bioinformatics by : Ming Chen

Download or read book Integrative Bioinformatics written by Ming Chen and published by Springer Nature. This book was released on 2022-04-15 with total page 381 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides an overview of the history of integrative bioinformatics and the actual situation and the relevant tools. Subjects cover the essential topics, basic introductions, and latest developments; biological data integration and manipulation; modeling and simulation of networks; as well as a number of applications of integrative bioinformatics. It aims to provide basic introduction of biological information systems and guidance for the computational analysis of systems biology. This book covers a range of issues and methods that unveil a multitude of omics data integration and relevance that integrative bioinformatics has today. It contains a unique compilation of invited and selected articles from the Journal of Integrative Bioinformatics (JIB) and annual meetings of the International Symposium on Integrative Bioinformatics.

Bioinformatics Database Systems

Author : Kevin Byron
Publisher : CRC Press
ISBN 13 : 131538809X
Total Pages : 290 pages
Book Rating : 4.3/5 (153 download)

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Book Synopsis Bioinformatics Database Systems by : Kevin Byron

Download or read book Bioinformatics Database Systems written by Kevin Byron and published by CRC Press. This book was released on 2016-12-19 with total page 290 pages. Available in PDF, EPUB and Kindle. Book excerpt: Modern biological databases comprise not only data, but also sophisticated query facilities and bioinformatics data analysis tools. This book provides an exploration through the world of Bioinformatics Database Systems. The book summarizes the popular and innovative bioinformatics repositories currently available, including popular primary genetic and protein sequence databases, phylogenetic databases, structure and pathway databases, microarray databases and boutique databases. It also explores the data quality and information integration issues currently involved with managing bioinformatics databases, including data quality issues that have been observed, and efforts in the data cleaning field. Biological data integration issues are also covered in-depth, and the book demonstrates how data integration can create new repositories to address the needs of the biological communities. It also presents typical data integration architectures employed in current bioinformatics databases. The latter part of the book covers biological data mining and biological data processing approaches using cloud-based technologies. General data mining approaches are discussed, as well as specific data mining methodologies that have been successfully deployed in biological data mining applications. Two biological data mining case studies are also included to illustrate how data, query, and analysis methods are integrated into user-friendly systems. Aimed at researchers and developers of bioinformatics database systems, the book is also useful as a supplementary textbook for a one-semester upper-level undergraduate course, or an introductory graduate bioinformatics course.

Data Integration in the Life Sciences

Author : Patrick Lambrix
Publisher : Springer
ISBN 13 : 9783642151194
Total Pages : 0 pages
Book Rating : 4.1/5 (511 download)

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Book Synopsis Data Integration in the Life Sciences by : Patrick Lambrix

Download or read book Data Integration in the Life Sciences written by Patrick Lambrix and published by Springer. This book was released on 2010-08-11 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: The development and increasingly widespread deployment of high-throughput experimental methods in the life sciences is giving rise to numerous large, c- plex and valuable data resources. This foundation of experimental data und- pins the systematic study of organismsand diseases, which increasinglydepends on the development of models of biological systems. The development of these models often requires integration of diverse experimental data resources; once constructed, the models themselves become data and present new integration challenges for tasks such as interpretation, validation and comparison. The Data Integration in the Life Sciences (DILS) Conference series brings together data and knowledge management researchers from the computer s- ence research community with bioinformaticians and computational biologists, to improve the understanding of how emerging data integration techniques can address requirements identi?ed in the life sciences. DILS 2010 was the seventh event in the series and was held in Goth- burg, Sweden during August 25–27, 2010. The associated proceedings contain 14 peer-reviewed papers and 2 invited papers. The sessions addressed ontology engineering, and in particular, evolution, matching and debugging of ontologies, akeycomponentforsemanticintegration;Web servicesasanimportanttechn- ogy for data integration in the life sciences; data and text mining techniques for discovering and recognizing biomedical entities and relationships between these entities; and information management, introducing data integration solutions for di?erent types of applications related to cancer, systems biology and - croarray experimental data, and an approach for integrating ranked data in the life sciences.