The Pine Genomes

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The Pine Genomes

Author : Amanda R. De La Torre
Publisher : Springer Nature
ISBN 13 : 3030933903
Total Pages : 269 pages
Book Rating : 4.0/5 (39 download)

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Book Synopsis The Pine Genomes by : Amanda R. De La Torre

Download or read book The Pine Genomes written by Amanda R. De La Torre and published by Springer Nature. This book was released on 2022-02-27 with total page 269 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is the first comprehensive compilation of the most up-to-date research in the genomics, transcriptomics, and breeding of pine species across Europe, North America, and Australia. With chapters on the state of the reference genomes, transposon function, genome-wide diversity, functional genomics, genomics of disease resistance, genomics of abiotic stress, and genomic selection, this book is a must-read for scientists, breeders, and students of plant genomics. The book contains 12 chapters over 300 pages authored by a group of world-renowned scientists in the field of pine genomics. Pines (Pinus) are the world’s most economically important forest tree species. The recent genome sequencing of several important pine species has paved the way for understanding their complex biology and helps future management and breeding efforts.

The Conifers: Genomes, Variation and Evolution

Author : David B. Neale
Publisher : Springer
ISBN 13 : 3319468073
Total Pages : 590 pages
Book Rating : 4.3/5 (194 download)

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Book Synopsis The Conifers: Genomes, Variation and Evolution by : David B. Neale

Download or read book The Conifers: Genomes, Variation and Evolution written by David B. Neale and published by Springer. This book was released on 2019-03-23 with total page 590 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is the first comprehensive volume on conifers detailing their genomes, variations, and evolution. The book begins with general information about conifers such as taxonomy, geography, reproduction, life history, and social and economic importance. Then topics discussed include the full genome sequence, complex traits, phenotypic and genetic variations, landscape genomics, and forest health and conservation. This book also synthesizes the research included to provide a bigger picture and suggest an evolutionary trajectory. As a large plant family, conifers are an important part of economic botany. The group includes the pines, spruces, firs, larches, yews, junipers, cedars, cypresses, and sequoias. Of the phylum Coniferophyta, conifers typically bear cones and evergreen leaves. Recently, there has been much data available in conifer genomics with the publication of several crop and non-crop genome sequences. In addition to their economic importance, conifers are an important habitat for humans and animals, especially in developing parts of the world. The application of genomics for improving the productivity of conifer crops holds great promise to help provide resources for the most needy in the world.

HiC-Pro: an Optimized and Flexible Pipeline for Hi-C Data Processing

Author : Oldenburg Oldenburg Press
Publisher :
ISBN 13 : 9781523764426
Total Pages : 40 pages
Book Rating : 4.7/5 (644 download)

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Book Synopsis HiC-Pro: an Optimized and Flexible Pipeline for Hi-C Data Processing by : Oldenburg Oldenburg Press

Download or read book HiC-Pro: an Optimized and Flexible Pipeline for Hi-C Data Processing written by Oldenburg Oldenburg Press and published by . This book was released on 2016-01-29 with total page 40 pages. Available in PDF, EPUB and Kindle. Book excerpt: HiC-Pro is an optimized and flexible pipeline for processing Hi-C data from raw reads to normalized contact maps. HiC-Pro maps reads, detects valid ligation products, performs quality controls and generates intra- and inter-chromosomal contact maps. It includes a fast implementation of the iterative correction method and is based on a memory-efficient data format for Hi-C contact maps. In addition, HiC-Pro can use phased genotype data to build allele-specific contact maps. We applied HiC-Pro to different Hi-C datasets, demonstrating its ability to easily process large data in a reasonable time. Source code and documentation are available at http://github.com/nservant/HiC-Pro.

Genetics, Genomics and Breeding of Conifers

Author : Christophe Plomion
Publisher : CRC Press
ISBN 13 : 1439876495
Total Pages : 476 pages
Book Rating : 4.4/5 (398 download)

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Book Synopsis Genetics, Genomics and Breeding of Conifers by : Christophe Plomion

Download or read book Genetics, Genomics and Breeding of Conifers written by Christophe Plomion and published by CRC Press. This book was released on 2011-08-10 with total page 476 pages. Available in PDF, EPUB and Kindle. Book excerpt: With contributions by internationally reputed researchers in the field, this book presents the implications of the genomic revolution for conifers-promoting a better understanding of the evolution of these organisms as well as new knowledge about the molecular basis of quantitative trait variation. Both of these discoveries play important roles in

Plant Cell Walls

Author : Nicholas C. Carpita
Publisher : Springer
ISBN 13 : 9401006687
Total Pages : 333 pages
Book Rating : 4.4/5 (1 download)

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Book Synopsis Plant Cell Walls by : Nicholas C. Carpita

Download or read book Plant Cell Walls written by Nicholas C. Carpita and published by Springer. This book was released on 2012-12-06 with total page 333 pages. Available in PDF, EPUB and Kindle. Book excerpt: This work is a comprehensive collection of articles that cover aspects of cell wall research in the genomic era. Some 2500 genes are involved in some way in wall biogenesis and turnover, from generation of substrates, to polysaccharide and lignin synthesis, assembly, and rearrangement in the wall. Although a great number of genes and gene families remain to be characterized, this issue provides a census of the genes that have been discovered so far. The articles comprising this issue not only illustrate the enormous progress made in identifying the wealth of wall-related genes but they also show the future directions and how far we have to go. As cell walls are an enormously important source of raw material, we anticipate that cell-wall-related genes are of significant economic importance. Examples include the modification of pectin-cross-linking or cell-cell adhesion to increase shelf life of fruits and vegetables, the enhancement of dietary fiber contents of cereals, the improvement of yield and quality of fibers, and the relative allocation of carbon to wall biomass for use as biofuels. The book is intended for academic and professional scientists working in the area of plant biology as well as material chemists and engineers, and food scientists who define new ways to use cell walls.

Forest Trees

Author : Chittaranjan Kole
Publisher : Springer Science & Business Media
ISBN 13 : 3540345418
Total Pages : 252 pages
Book Rating : 4.5/5 (43 download)

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Book Synopsis Forest Trees by : Chittaranjan Kole

Download or read book Forest Trees written by Chittaranjan Kole and published by Springer Science & Business Media. This book was released on 2007-06-30 with total page 252 pages. Available in PDF, EPUB and Kindle. Book excerpt: Forest trees cover one third of the global land surface, constitute many ecosystems, and play a pivotal role in the world economy. This volume details Populus trees, pines, Fagaceae trees, eucalypts, spruces, Douglas fir and black walnut, and offers a first-ever detailed review of Cryptomeria japonica. It thoroughly discusses innovative strategies to address the inherent problems of genome analysis of tree species.

Plant Genome Diversity Volume 1

Author : Jonathan Wendel
Publisher : Springer Science & Business Media
ISBN 13 : 3709111307
Total Pages : 282 pages
Book Rating : 4.7/5 (91 download)

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Book Synopsis Plant Genome Diversity Volume 1 by : Jonathan Wendel

Download or read book Plant Genome Diversity Volume 1 written by Jonathan Wendel and published by Springer Science & Business Media. This book was released on 2012-03-23 with total page 282 pages. Available in PDF, EPUB and Kindle. Book excerpt: In this timely new 2-volume treatise, experts from around the world have banded together to produce a first-of-its-kind synopsis of the exciting and fast moving field of plant evolutionary genomics. In Volume I of Plant Genome Diversity, an update is provided on what we have learned from plant genome sequencing projects. This is followed by more focused chapters on the various genomic “residents” of plant genomes, including transposable elements, centromeres, small RNAs, and the evolutionary dynamics of genes and non-coding sequences. Attention is drawn to advances in our understanding of plant mitochondrial and plastid genomes, as well as the significance of duplication in genic evolution and the non-independent evolution among sequences in plant genomes. Finally, Volume I provides an introduction to the vibrant new frontier of plant epigenomics, describing the current state of our knowledge and the evolutionary implications of the epigenomic landscape.

The Spruce Genome

Author : Ilga M. Porth
Publisher : Springer Nature
ISBN 13 : 3030210014
Total Pages : 225 pages
Book Rating : 4.0/5 (32 download)

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Book Synopsis The Spruce Genome by : Ilga M. Porth

Download or read book The Spruce Genome written by Ilga M. Porth and published by Springer Nature. This book was released on 2020-08-01 with total page 225 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book offers comprehensive information on the genomics of spruces (Picea spp.), naturally abundant conifer tree species that are widely distributed in the Northern Hemisphere. Due to their tremendous ecological and economic importance, the management of forest genetic resources has chiefly focused on conservation and tree improvement. A draft genome sequence of the 20-gigabase Norway spruce genome was published in the journal Nature in 2013. Continuous efforts to improve the spruce genome assembly are underway, but are hindered by the inherent characteristics of conifer genomes: high amounts of repetitive sequences (introns and transposable elements) in the genome and large gene family expansions with regards to abiotic stress, secondary metabolism and spruces' defense responses to pathogens and herbivory. This book presents the latest information on the status of genome assemblies, provides detailed insights into transposable elements and methylation patterns, and highlights the extensive genomic resources available for inferring population genomics and climate adaptation, as well as emerging genomics tools for tree improvement programs. In addition, this volume features whole-genome comparisons among conifer species, and demonstrates how functional genomics can be used to improve gene function annotations. The book closes with an outlook on emerging fields of research in spruce genomics.

Genetics and Genomics of Forest Trees

Author : Filippos A. (Phil) Aravanopoulos
Publisher : MDPI
ISBN 13 : 3038972983
Total Pages : 333 pages
Book Rating : 4.0/5 (389 download)

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Book Synopsis Genetics and Genomics of Forest Trees by : Filippos A. (Phil) Aravanopoulos

Download or read book Genetics and Genomics of Forest Trees written by Filippos A. (Phil) Aravanopoulos and published by MDPI. This book was released on 2018-11-23 with total page 333 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is a printed edition of the Special Issue "Genetics and Genomics of Forest Trees" that was published in Forests

Proceedings

Author :
Publisher :
ISBN 13 :
Total Pages : 556 pages
Book Rating : 4.:/5 (89 download)

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Book Synopsis Proceedings by :

Download or read book Proceedings written by and published by . This book was released on 1973 with total page 556 pages. Available in PDF, EPUB and Kindle. Book excerpt:

The Genome Odyssey

Author : Dr. Euan Angus Ashley
Publisher : Celadon Books
ISBN 13 : 1250234972
Total Pages : 221 pages
Book Rating : 4.2/5 (52 download)

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Book Synopsis The Genome Odyssey by : Dr. Euan Angus Ashley

Download or read book The Genome Odyssey written by Dr. Euan Angus Ashley and published by Celadon Books. This book was released on 2021-02-23 with total page 221 pages. Available in PDF, EPUB and Kindle. Book excerpt: In The Genome Odyssey, Dr. Euan Ashley, Stanford professor of medicine and genetics, brings the breakthroughs of precision medicine to vivid life through the real diagnostic journeys of his patients and the tireless efforts of his fellow doctors and scientists as they hunt to prevent, predict, and beat disease. Since the Human Genome Project was completed in 2003, the price of genome sequencing has dropped at a staggering rate. It’s as if the price of a Ferrari went from $350,000 to a mere forty cents. Through breakthroughs made by Dr. Ashley’s team at Stanford and other dedicated groups around the world, analyzing the human genome has decreased from a heroic multibillion dollar effort to a single clinical test costing less than $1,000. For the first time we have within our grasp the ability to predict our genetic future, to diagnose and prevent disease before it begins, and to decode what it really means to be human. In The Genome Odyssey, Dr. Ashley details the medicine behind genome sequencing with clarity and accessibility. More than that, with passion for his subject and compassion for his patients, he introduces readers to the dynamic group of researchers and doctor detectives who hunt for answers, and to the pioneering patients who open up their lives to the medical community during their search for diagnoses and cures. He describes how he led the team that was the first to analyze and interpret a complete human genome, how they broke genome speed records to diagnose and treat a newborn baby girl whose heart stopped five times on the first day of her life, and how they found a boy with tumors growing inside his heart and traced the cause to a missing piece of his genome. These patients inspire Dr. Ashley and his team as they work to expand the boundaries of our medical capabilities and to envision a future where genome sequencing is available for all, where medicine can be tailored to treat specific diseases and to decode pathogens like viruses at the genomic level, and where our medical system as we know it has been completely revolutionized.

Forest Genomics and Biotechnology

Author : Isabel Allona
Publisher : Frontiers Media SA
ISBN 13 : 2889631788
Total Pages : 185 pages
Book Rating : 4.8/5 (896 download)

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Book Synopsis Forest Genomics and Biotechnology by : Isabel Allona

Download or read book Forest Genomics and Biotechnology written by Isabel Allona and published by Frontiers Media SA. This book was released on 2019-11-27 with total page 185 pages. Available in PDF, EPUB and Kindle. Book excerpt: This Research Topic addresses research in genomics and biotechnology to improve the growth and quality of forest trees for wood, pulp, biorefineries and carbon capture. Forests are the world’s greatest repository of terrestrial biomass and biodiversity. Forests serve critical ecological services, supporting the preservation of fauna and flora, and water resources. Planted forests also offer a renewable source of timber, for pulp and paper production, and the biorefinery. Despite their fundamental role for society, thousands of hectares of forests are lost annually due to deforestation, pests, pathogens and urban development. As a consequence, there is an increasing need to develop trees that are more productive under lower inputs, while understanding how they adapt to the environment and respond to biotic and abiotic stress. Forest genomics and biotechnology, disciplines that study the genetic composition of trees and the methods required to modify them, began over a quarter of a century ago with the development of the first genetic maps and establishment of early methods of genetic transformation. Since then, genomics and biotechnology have impacted all research areas of forestry. Genome analyses of tree populations have uncovered genes involved in adaptation and response to biotic and abiotic stress. Genes that regulate growth and development have been identified, and in many cases their mechanisms of action have been described. Genetic transformation is now widely used to understand the roles of genes and to develop germplasm that is more suitable for commercial tree plantations. However, in contrast to many annual crops that have benefited from centuries of domestication and extensive genomic and biotechnology research, in forestry the field is still in its infancy. Thus, tremendous opportunities remain unexplored. This Research Topic aims to briefly summarize recent findings, to discuss long-term goals and to think ahead about future developments and how this can be applied to improve growth and quality of forest trees.

Memory and Learning in Plants

Author : Frantisek Baluska
Publisher : Springer
ISBN 13 : 331975596X
Total Pages : 222 pages
Book Rating : 4.3/5 (197 download)

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Book Synopsis Memory and Learning in Plants by : Frantisek Baluska

Download or read book Memory and Learning in Plants written by Frantisek Baluska and published by Springer. This book was released on 2018-04-23 with total page 222 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book assembles recent research on memory and learning in plants. Organisms that share a capability to store information about experiences in the past have an actively generated background resource on which they can compare and evaluate coming experiences in order to react faster or even better. This is an essential tool for all adaptation purposes. Such memory/learning skills can be found from bacteria up to fungi, animals and plants, although until recently it had been mentioned only as capabilities of higher animals. With the rise of epigenetics the context dependent marking of experiences on the genetic level is an essential perspective to understand memory and learning in organisms. Plants are highly sensitive organisms that actively compete for environmental resources. They assess their surroundings, estimate how much energy they need for particular goals, and then realize the optimum variant. They take measures to control certain environmental resources. They perceive themselves and can distinguish between ‘self’ and ‘non-self’. They process and evaluate information and then modify their behavior accordingly. The book will guide scientists in further investigations on these skills of plant behavior and on how plants mediate signaling processes between themselves and the environment in memory and learning processes.

Genetics and Improvement of Forest Trees

Author : Yuji Ide
Publisher : MDPI
ISBN 13 : 303651242X
Total Pages : 328 pages
Book Rating : 4.0/5 (365 download)

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Book Synopsis Genetics and Improvement of Forest Trees by : Yuji Ide

Download or read book Genetics and Improvement of Forest Trees written by Yuji Ide and published by MDPI. This book was released on 2021-08-16 with total page 328 pages. Available in PDF, EPUB and Kindle. Book excerpt: Forest tree improvement has mainly been implemented to enhance the productivity of artificial forests. However, given the drastically changing global environment, improvement of various traits related to environmental adaptability is more essential than ever. This book focuses on genetic information, including trait heritability and the physiological mechanisms thereof, which facilitate tree improvement. Nineteen papers are included, reporting genetic approaches to improving various species, including conifers, broad-leaf trees, and bamboo. All of the papers in this book provide cutting-edge genetic information on tree genetics and suggest research directions for future tree improvement.

Plant Genomes

Author : Jean-Nicolas Volff
Publisher : Karger Medical and Scientific Publishers
ISBN 13 : 3805584911
Total Pages : 155 pages
Book Rating : 4.8/5 (55 download)

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Book Synopsis Plant Genomes by : Jean-Nicolas Volff

Download or read book Plant Genomes written by Jean-Nicolas Volff and published by Karger Medical and Scientific Publishers. This book was released on 2008-01-01 with total page 155 pages. Available in PDF, EPUB and Kindle. Book excerpt: Recent major advances in the field of comparative genomics and cytogenomics of plants, particularly associated with the completion of ambitious genome projects, have uncovered astonishing facets of the architecture and evolutionary history of plant genomes. The aim of this book was to review these recent developments as well as their implications in our understanding of the mechanisms which drive plant diversity. New insights into the evolution of gene functions, gene families and genome size are presented, with particular emphasis on the evolutionary impact of polyploidization and transposable elements. Knowledge on the structure and evolution of plant sex chromosomes, centromeres and microRNAs is reviewed and updated. Taken together, the contributions by internationally recognized experts present a panoramic overview of the structural features and evolutionary dynamics of plant genomes.This volume of Genome Dynamics will provide researchers, teachers and students in the fields of biology and agronomy with a valuable source of current knowledge on plant genomes.

Forest Genomics and Biotechnology

Author : Richard Meilan
Publisher : CABI
ISBN 13 : 1780643500
Total Pages : 289 pages
Book Rating : 4.7/5 (86 download)

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Book Synopsis Forest Genomics and Biotechnology by : Richard Meilan

Download or read book Forest Genomics and Biotechnology written by Richard Meilan and published by CABI. This book was released on 2019-12-19 with total page 289 pages. Available in PDF, EPUB and Kindle. Book excerpt: Developments in genomics and biotechnology are opening up new avenues for accelerating the domestication of forest trees in a climate change-driven world. This book presents an authoritative update of forest tree biotechnology and genomics methodologies, procedures and accomplishments, from basic biological science to applications in forestry and related sciences. It gives expert evaluation of achievements and discussion about the impact that novel forest biotechnological and genomics approaches are having on traditional breeding for improvement of forest tree species and production of forest-based products. It also describes the legal and regulatory aspects of forest biotechnology, with an emphasis on biosafety. It is a reference for forest biologists, including basic and applied scientists involved in forest tree breeding and biotechnology, bioenergy research, biomaterial product development. It is a comprehensive text for graduate-level students in the areas of Plant Biology and Forest Genetics, Silviculture and Agroforestry, and Bioenergy Science and Technology.

Plant Breeding Reviews, Volume 44

Author :
Publisher : John Wiley & Sons
ISBN 13 : 1119716950
Total Pages : 336 pages
Book Rating : 4.1/5 (197 download)

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Book Synopsis Plant Breeding Reviews, Volume 44 by :

Download or read book Plant Breeding Reviews, Volume 44 written by and published by John Wiley & Sons. This book was released on 2020-11-10 with total page 336 pages. Available in PDF, EPUB and Kindle. Book excerpt: Plant Breeding Reviews presents state-of-the-art reviews on plant genetics and the breeding of all types of crops by both traditional means and molecular methods. Many of the crops widely grown today stem from a very narrow genetic base; understanding and preserving crop genetic resources is vital to the security of food systems worldwide. The emphasis of the series is on methodology, a fundamental understanding of crop genetics, and applications to major crops.