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The Geometry Of Biological Time
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Book Synopsis The Geometry of Biological Time by : Arthur T. Winfree
Download or read book The Geometry of Biological Time written by Arthur T. Winfree and published by Springer Science & Business Media. This book was released on 2013-03-09 with total page 802 pages. Available in PDF, EPUB and Kindle. Book excerpt: Dealing with dynamics of processes that repeat themselves regularly, this revised and updated edition extends the thread from 1980 to the present day, concentrating on areas of interest where there will be much activity in the future. This involves going through spatial biochemical, electrophysiological, and organismic dynamical systems and patterns that were discovered by pursuing the theme of phase singularities introduced in the original book. In particular the work on excitability in cell membranes will be thoroughly updated as will the references throughout the book.
Book Synopsis Perspectives on Organisms by : Giuseppe Longo
Download or read book Perspectives on Organisms written by Giuseppe Longo and published by Springer Science & Business Media. This book was released on 2013-12-13 with total page 293 pages. Available in PDF, EPUB and Kindle. Book excerpt: This authored monograph introduces a genuinely theoretical approach to biology. Starting point is the investigation of empirical biological scaling including their variability, which is found in the literature, e.g. allometric relationships, fractals, etc. The book then analyzes two different aspects of biological time: first, a supplementary temporal dimension to accommodate proper biological rhythms; secondly, the concepts of protension and retention as a means of local organization of time in living organisms. Moreover, the book investigates the role of symmetry in biology, in view of its ubiquitous importance in physics. In relation with the notion of extended critical transitions, the book proposes that organisms and their evolution can be characterized by continued symmetry changes, which accounts for the irreducibility of their historicity and variability. The authors also introduce the concept of anti-entropy as a measure for the potential of variability, being equally understood as alterations in symmetry. By this, the book provides a mathematical account of Gould's analysis of phenotypic complexity with respect to biological evolution. The target audience primarily comprises researchers interested in new theoretical approaches to biology, from physical, biological or philosophical backgrounds, but the book may also be beneficial for graduate students who want to enter this field.
Book Synopsis Cell Biology by the Numbers by : Ron Milo
Download or read book Cell Biology by the Numbers written by Ron Milo and published by Garland Science. This book was released on 2015-12-07 with total page 400 pages. Available in PDF, EPUB and Kindle. Book excerpt: A Top 25 CHOICE 2016 Title, and recipient of the CHOICE Outstanding Academic Title (OAT) Award. How much energy is released in ATP hydrolysis? How many mRNAs are in a cell? How genetically similar are two random people? What is faster, transcription or translation?Cell Biology by the Numbers explores these questions and dozens of others provid
Download or read book Internal Time written by Till Roenneberg and published by Harvard University Press. This book was released on 2012-04-30 with total page 313 pages. Available in PDF, EPUB and Kindle. Book excerpt: Winner of a British Medical Association Book Award A Brain Pickings Best Science Book of the Year Early birds and night owls are born, not made. Sleep patterns may be the most obvious manifestation of the highly individualized biological clocks we inherit, but these clocks also regulate bodily functions from digestion to hormone levels to cognition. Living at odds with our internal timepieces, Till Roenneberg shows, can make us chronically sleep deprived and more likely to smoke, gain weight, feel depressed, fall ill, and fail geometry. By understanding and respecting our internal time, we can live better. “Internal Time is a cautionary tale—actually a series of 24 tales, not coincidentally. Roenneberg ranges widely from the inner workings of biological rhythms to their social implications, illuminating each scientific tutorial with an anecdote inspired by clinical research...Written with grace and good humor, Internal Time is a serious work of science incorporating the latest research in chronobiology...[A] compelling volume.” —A. Roger Ekirch, Wall Street Journal “This is a fascinating introduction to an important topic, which will appeal to anyone who wishes to delve deep into the world of chronobiology, or simply wonders why they struggle to get a good night’s sleep.” —Richard Wiseman, New Scientist
Download or read book Shape written by Jordan Ellenberg and published by Penguin. This book was released on 2021-05-25 with total page 481 pages. Available in PDF, EPUB and Kindle. Book excerpt: An instant New York Times Bestseller! “Unreasonably entertaining . . . reveals how geometric thinking can allow for everything from fairer American elections to better pandemic planning.” —The New York Times From the New York Times-bestselling author of How Not to Be Wrong—himself a world-class geometer—a far-ranging exploration of the power of geometry, which turns out to help us think better about practically everything. How should a democracy choose its representatives? How can you stop a pandemic from sweeping the world? How do computers learn to play Go, and why is learning Go so much easier for them than learning to read a sentence? Can ancient Greek proportions predict the stock market? (Sorry, no.) What should your kids learn in school if they really want to learn to think? All these are questions about geometry. For real. If you're like most people, geometry is a sterile and dimly remembered exercise you gladly left behind in the dust of ninth grade, along with your braces and active romantic interest in pop singers. If you recall any of it, it's plodding through a series of miniscule steps only to prove some fact about triangles that was obvious to you in the first place. That's not geometry. Okay, it is geometry, but only a tiny part, which has as much to do with geometry in all its flush modern richness as conjugating a verb has to do with a great novel. Shape reveals the geometry underneath some of the most important scientific, political, and philosophical problems we face. Geometry asks: Where are things? Which things are near each other? How can you get from one thing to another thing? Those are important questions. The word "geometry"comes from the Greek for "measuring the world." If anything, that's an undersell. Geometry doesn't just measure the world—it explains it. Shape shows us how.
Book Synopsis Fractal Geometry in Biological Systems by : Philip M. Iannaccone
Download or read book Fractal Geometry in Biological Systems written by Philip M. Iannaccone and published by CRC Press. This book was released on 1996-07-25 with total page 448 pages. Available in PDF, EPUB and Kindle. Book excerpt: Fractal Geometry in Biological Systems was written by the leading experts in the field of mathematics and the biological sciences together. It is intended to inform researchers in the bringing about the fundamental nature of fractals and their widespread appearance in biological systems. The chapters explain how the presence of fractal geometry can be used in an analytical way to predict outcomes in systems, to generate hypotheses, and to help design experiments. The authors make the mathematics accessible to a wide audience and do not assume prior experience in this area.
Book Synopsis Biological Clocks, Rhythms, and Oscillations by : Daniel B. Forger
Download or read book Biological Clocks, Rhythms, and Oscillations written by Daniel B. Forger and published by MIT Press. This book was released on 2017-11-16 with total page 369 pages. Available in PDF, EPUB and Kindle. Book excerpt: An introduction to the mathematical, computational, and analytical techniques used for modeling biological rhythms, presenting tools from many disciplines and example applications. All areas of biology and medicine contain rhythms, and these behaviors are best understood through mathematical tools and techniques. This book offers a survey of mathematical, computational, and analytical techniques used for modeling biological rhythms, gathering these methods for the first time in one volume. Drawing on material from such disciplines as mathematical biology, nonlinear dynamics, physics, statistics, and engineering, it presents practical advice and techniques for studying biological rhythms, with a common language. The chapters proceed with increasing mathematical abstraction. Part I, on models, highlights the implicit assumptions and common pitfalls of modeling, and is accessible to readers with basic knowledge of differential equations and linear algebra. Part II, on behaviors, focuses on simpler models, describing common properties of biological rhythms that range from the firing properties of squid giant axon to human circadian rhythms. Part III, on mathematical techniques, guides readers who have specific models or goals in mind. Sections on “frontiers” present the latest research; “theory” sections present interesting mathematical results using more accessible approaches than can be found elsewhere. Each chapter offers exercises. Commented MATLAB code is provided to help readers get practical experience. The book, by an expert in the field, can be used as a textbook for undergraduate courses in mathematical biology or graduate courses in modeling biological rhythms and as a reference for researchers.
Book Synopsis Timing of Biological Clocks by : Arthur T. Winfree
Download or read book Timing of Biological Clocks written by Arthur T. Winfree and published by Henry Holt and Company. This book was released on 1986-11-15 with total page 339 pages. Available in PDF, EPUB and Kindle. Book excerpt: "A clock," writes Arthur T. Winfree, "is not much good if you can't pull out its stem and set it." Similarly, the most critical property of biological clocks--which rhythmically organize the processes of life--is their ability to reset on cue. This ability allows enables biological clocks to regain synchrony with a changing environment (as when we travel across time zones) or to maintain the alignment between certain physiological rhythms and the natural solar day. In The Timing of Biological Clocks, Winfree explores circadian rhythms. In reporting experiments on animals, plants, and single cells, he not only illustrates the principles that guide the resetting of biological clocks but reveals that each of these clocks has a vulnerable phase, a moment in each "turn of the dial" when a cueing stimulus of a particular intensity results in an abnormal, unpredictable resetting--perhaps even annihilating the clock's rhythm entirely. A singular feature of the author's exploration of these phenomena is his use of a range of colors to represent the passage of cyclic time. By this device, Winfree not only removes the purely arbitrary discontinuity of a conventional clock dial but makes reasoning about the real discontinuities of biological clocks transparently clear.
Book Synopsis Algebraic Statistics for Computational Biology by : L. Pachter
Download or read book Algebraic Statistics for Computational Biology written by L. Pachter and published by Cambridge University Press. This book was released on 2005-08-22 with total page 440 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book, first published in 2005, offers an introduction to the application of algebraic statistics to computational biology.
Book Synopsis The Geometry of Ecological Interactions by : Ulf Dieckmann
Download or read book The Geometry of Ecological Interactions written by Ulf Dieckmann and published by Cambridge University Press. This book was released on 2000-05-04 with total page 583 pages. Available in PDF, EPUB and Kindle. Book excerpt: The field of theoretical ecology has expanded dramatically in the last few years. This volume gives detailed coverage of the main developing areas in spatial ecological theory, and is written by world experts in the field. Integrating the perspective from field ecology with novel methods for simplifying spatial complexity, it offers a didactical treatment with a gradual increase in mathematical sophistication from beginning to end. In addition, the volume features introductions to those fundamental phenomena in spatial ecology where emerging spatial patterns influence ecological outcomes quantitatively. An appreciation of the consequences of this is required if ecological theory is to move on in the 21st century. Written for reseachers and graduate students in theoretical, evolutionary and spatial ecology, applied mathematics and spatial statistics, it will be seen as a ground breaking treatment of modern spatial ecological theory.
Book Synopsis A Course in Mathematical Biology by : Gerda de Vries
Download or read book A Course in Mathematical Biology written by Gerda de Vries and published by SIAM. This book was released on 2006-07-01 with total page 307 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is the only book that teaches all aspects of modern mathematical modeling and that is specifically designed to introduce undergraduate students to problem solving in the context of biology. Included is an integrated package of theoretical modeling and analysis tools, computational modeling techniques, and parameter estimation and model validation methods, with a focus on integrating analytical and computational tools in the modeling of biological processes. Divided into three parts, it covers basic analytical modeling techniques; introduces computational tools used in the modeling of biological problems; and includes various problems from epidemiology, ecology, and physiology. All chapters include realistic biological examples, including many exercises related to biological questions. In addition, 25 open-ended research projects are provided, suitable for students. An accompanying Web site contains solutions and a tutorial for the implementation of the computational modeling techniques. Calculations can be done in modern computing languages such as Maple, Mathematica, and MATLAB?.
Book Synopsis Calculating the Secrets of Life by : National Research Council
Download or read book Calculating the Secrets of Life written by National Research Council and published by National Academies Press. This book was released on 1995-04-06 with total page 300 pages. Available in PDF, EPUB and Kindle. Book excerpt: As researchers have pursued biology's secrets to the molecular level, mathematical and computer sciences have played an increasingly important roleâ€"in genome mapping, population genetics, and even the controversial search for "Eve," hypothetical mother of the human race. In this first-ever survey of the partnership between the two fields, leading experts look at how mathematical research and methods have made possible important discoveries in biology. The volume explores how differential geometry, topology, and differential mechanics have allowed researchers to "wind" and "unwind" DNA's double helix to understand the phenomenon of supercoiling. It explains how mathematical tools are revealing the workings of enzymes and proteins. And it describes how mathematicians are detecting echoes from the origin of life by applying stochastic and statistical theory to the study of DNA sequences. This informative and motivational book will be of interest to researchers, research administrators, and educators and students in mathematics, computer sciences, and biology.
Book Synopsis Morphometric Tools for Landmark Data by : Fred L. Bookstein
Download or read book Morphometric Tools for Landmark Data written by Fred L. Bookstein and published by Cambridge University Press. This book was released on 1991 with total page 459 pages. Available in PDF, EPUB and Kindle. Book excerpt: This first systematic survey of the subject combines multivariate statistical analysis, geometry, and biomathematics.
Book Synopsis Modelling Biological Populations in Space and Time by : Eric Renshaw
Download or read book Modelling Biological Populations in Space and Time written by Eric Renshaw and published by Cambridge University Press. This book was released on 1993-08-26 with total page 428 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume develops a unifying approach to population studies, emphasising the interplay between modelling and experimentation. Throughout, mathematicians and biologists are provided with a framework within which population dynamics can be fully explored and understood. Aspects of population dynamics covered include birth-death and logistic processes, competition and predator-prey relationships, chaos, reaction time-delays, fluctuating environments, spatial systems, velocities of spread, epidemics, and spatial branching structures. Both deterministic and stochastic models are considered. Whilst the more theoretically orientated sections will appeal to mathematical biologists, the material is presented so that readers with little mathematical expertise can bypass these without losing the main flow of the text.
Book Synopsis Mathematical Models in Biology by : Leah Edelstein-Keshet
Download or read book Mathematical Models in Biology written by Leah Edelstein-Keshet and published by SIAM. This book was released on 1988-01-01 with total page 629 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mathematical Models in Biology is an introductory book for readers interested in biological applications of mathematics and modeling in biology. A favorite in the mathematical biology community, it shows how relatively simple mathematics can be applied to a variety of models to draw interesting conclusions. Connections are made between diverse biological examples linked by common mathematical themes. A variety of discrete and continuous ordinary and partial differential equation models are explored. Although great advances have taken place in many of the topics covered, the simple lessons contained in this book are still important and informative. Audience: the book does not assume too much background knowledge--essentially some calculus and high-school algebra. It was originally written with third- and fourth-year undergraduate mathematical-biology majors in mind; however, it was picked up by beginning graduate students as well as researchers in math (and some in biology) who wanted to learn about this field.
Book Synopsis Fractals in Biology and Medicine by : Gabriele A. Losa
Download or read book Fractals in Biology and Medicine written by Gabriele A. Losa and published by Birkhäuser. This book was released on 2012-12-06 with total page 354 pages. Available in PDF, EPUB and Kindle. Book excerpt: In March 2000 leading scientists gathered at the Centro Seminariale Monte Verità, Ascona, Switzerland, for the Third International Symposium on "Fractals 2000 in Biology and Medicine". This interdisciplinary conference provided stimulating contributions from the very topical field Fractals in Biology and Medicine. This volume highlights the growing power and efficacy of the fractal geometry in understanding how to analyze living phenomena and complex shapes.
Download or read book Modeling Life written by Alan Garfinkel and published by Springer. This book was released on 2017-09-06 with total page 445 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book develops the mathematical tools essential for students in the life sciences to describe interacting systems and predict their behavior. From predator-prey populations in an ecosystem, to hormone regulation within the body, the natural world abounds in dynamical systems that affect us profoundly. Complex feedback relations and counter-intuitive responses are common in nature; this book develops the quantitative skills needed to explore these interactions. Differential equations are the natural mathematical tool for quantifying change, and are the driving force throughout this book. The use of Euler’s method makes nonlinear examples tractable and accessible to a broad spectrum of early-stage undergraduates, thus providing a practical alternative to the procedural approach of a traditional Calculus curriculum. Tools are developed within numerous, relevant examples, with an emphasis on the construction, evaluation, and interpretation of mathematical models throughout. Encountering these concepts in context, students learn not only quantitative techniques, but how to bridge between biological and mathematical ways of thinking. Examples range broadly, exploring the dynamics of neurons and the immune system, through to population dynamics and the Google PageRank algorithm. Each scenario relies only on an interest in the natural world; no biological expertise is assumed of student or instructor. Building on a single prerequisite of Precalculus, the book suits a two-quarter sequence for first or second year undergraduates, and meets the mathematical requirements of medical school entry. The later material provides opportunities for more advanced students in both mathematics and life sciences to revisit theoretical knowledge in a rich, real-world framework. In all cases, the focus is clear: how does the math help us understand the science?
