Structure And Dynamics Of Rna

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RNA Structure and Dynamics

Author : Jienyu Ding
Publisher : Springer Nature
ISBN 13 : 1071626876
Total Pages : 256 pages
Book Rating : 4.0/5 (716 download)

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Book Synopsis RNA Structure and Dynamics by : Jienyu Ding

Download or read book RNA Structure and Dynamics written by Jienyu Ding and published by Springer Nature. This book was released on 2022-10-13 with total page 256 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume provides a wide spectrum of multidisciplinary approaches for studying RNA structure and dynamics, including detailed accounts of experimental and computational procedures. Chapters guide readers through cryo-electron microscopy, crystallography, isothermal titration calorimetry, small angle X-ray scattering, single-molecule Förster Energy transfer, X-ray free electron laser, atomic force microscopy, computational simulation, and prediction. Written in the format of the highly successful Methods in Molecular Biology series, each chapter includes an introduction to the topic, lists necessary materials and reagents, includes tips on troubleshooting and known pitfalls, and step-by-step, readily reproducible protocols. Authoritative and cutting-edge, RNA Structure and Dynamics aims to be a foundation for future studies and to be a source of inspiration for new investigations in the field.

RNA Trafficking and Nuclear Structure Dynamics

Author : Philippe Jeanteur
Publisher : Springer
ISBN 13 : 3540742662
Total Pages : 153 pages
Book Rating : 4.5/5 (47 download)

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Book Synopsis RNA Trafficking and Nuclear Structure Dynamics by : Philippe Jeanteur

Download or read book RNA Trafficking and Nuclear Structure Dynamics written by Philippe Jeanteur and published by Springer. This book was released on 2007-11-03 with total page 153 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume explores nuclear structure and trafficking involving or relevant to RNA and RNPs. Topics include advances and current problems in the structural organization of different subnuclear compartments, Cajal bodies and gems, speckles containing splicing factors, and PML bodies characteristic of ProMyelocytic leukemia. The book also describes the dynamic aspects of RNA trafficking and the latest technologies for live cell imaging of mRNA.

Structure and Dynamics of RNA

Author :
Publisher :
ISBN 13 : 9781468451740
Total Pages : 352 pages
Book Rating : 4.4/5 (517 download)

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Book Synopsis Structure and Dynamics of RNA by :

Download or read book Structure and Dynamics of RNA written by and published by . This book was released on 1986-10-31 with total page 352 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Structure and Dynamics of RNA

Author : P. H. van Knippenberg
Publisher : Springer Science & Business Media
ISBN 13 : 1468451731
Total Pages : 335 pages
Book Rating : 4.4/5 (684 download)

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Book Synopsis Structure and Dynamics of RNA by : P. H. van Knippenberg

Download or read book Structure and Dynamics of RNA written by P. H. van Knippenberg and published by Springer Science & Business Media. This book was released on 2013-03-08 with total page 335 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume contains contributions from the speakers at the NATO Advanced Research Workshop on "3D 5tructure and Dynamics of RNA", which was held in Renesse, The Netherlands, 21 - 24 August, 1985. Two major developments have determined the progress of nucleic acid research during the last decade. First, manipulation of genetic material by recombinant DNA methodology has enabled detailed studies of the function of nucleic acids in vivo. 5econd, the use of powerful physical methods, such as X-ray diffraction and nuclear magnetic resonance spectroscopy, in the study of biomacromolecules has provided information regarding the structure and the dynamics of nucleic acids. Both developments were enabled by the advance of synthetic methods that allow preparation of nucleic acid molecules of required sequence and length. The basic understanding of nucleic acid function will ultimately depend on a close collaboration between molecular biologists and biophy sicists. In the case of RNA, the ground rules for the formation of secondary structure have been derived from physical studies of oligoribonucleotides. Powerfull spectroscopic techniques have revealed more details of ~~A structure including novel conformations (e.g. left-handed Z-RNA). A wealth of information has been obtained by studying the relatively small transfer RNA molecules. A few of these RNAs have been crystallized, enabling determination of their three-dimensional structure. It has become apparent that "non-classical" basepairing between distal nucleotides gives rise to tertiary interactions, determining the overall shape of the molecule.

RNA 3D Structure Analysis and Prediction

Author : Neocles Leontis
Publisher : Springer Science & Business Media
ISBN 13 : 3642257402
Total Pages : 402 pages
Book Rating : 4.6/5 (422 download)

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Book Synopsis RNA 3D Structure Analysis and Prediction by : Neocles Leontis

Download or read book RNA 3D Structure Analysis and Prediction written by Neocles Leontis and published by Springer Science & Business Media. This book was released on 2012-06-05 with total page 402 pages. Available in PDF, EPUB and Kindle. Book excerpt: With the dramatic increase in RNA 3D structure determination in recent years, we now know that RNA molecules are highly structured. Moreover, knowledge of RNA 3D structures has proven crucial for understanding in atomic detail how they carry out their biological functions. Because of the huge number of potentially important RNA molecules in biology, many more than can be studied experimentally, we need theoretical approaches for predicting 3D structures on the basis of sequences alone. This volume provides a comprehensive overview of current progress in the field by leading practitioners employing a variety of methods to model RNA 3D structures by homology, by fragment assembly, and by de novo energy and knowledge-based approaches.

Biophysical, Chemical, and Functional Probes of RNA Structure, Interactions and Folding: Part B

Author : Daniel Herschlag
Publisher : Academic Press
ISBN 13 : 0123809231
Total Pages : 567 pages
Book Rating : 4.1/5 (238 download)

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Book Synopsis Biophysical, Chemical, and Functional Probes of RNA Structure, Interactions and Folding: Part B by : Daniel Herschlag

Download or read book Biophysical, Chemical, and Functional Probes of RNA Structure, Interactions and Folding: Part B written by Daniel Herschlag and published by Academic Press. This book was released on 2009-11-16 with total page 567 pages. Available in PDF, EPUB and Kindle. Book excerpt: This MIE volume provides laboratory techniques that aim to predict the structure of a protein which can have tremendous implications ranging from drug design, to cellular pathways and their dynamics, to viral entry into cells. Expert researchers introduce the most advanced technologies and techniques in protein structure and folding Includes techniques on tiling assays

Ribosomes Structure, Function, and Dynamics

Author : Marina V. Rodnina
Publisher : Springer Science & Business Media
ISBN 13 : 3709102154
Total Pages : 428 pages
Book Rating : 4.7/5 (91 download)

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Book Synopsis Ribosomes Structure, Function, and Dynamics by : Marina V. Rodnina

Download or read book Ribosomes Structure, Function, and Dynamics written by Marina V. Rodnina and published by Springer Science & Business Media. This book was released on 2011-12-10 with total page 428 pages. Available in PDF, EPUB and Kindle. Book excerpt: The ribosome is a macromolecular machine that synthesizes proteins with a high degree of speed and accuracy. Our present understanding of its structure, function and dynamics is the result of six decades of research. This book collects over 40 articles based on the talks presented at the 2010 Ribosome Meeting, held in Orvieto, Italy, covering all facets of the structure and function of the ribosome. New high-resolution crystal structures of functional ribosome complexes and cryo-EM structures of translating ribosomes are presented, while partial reactions of translation are examined in structural and mechanistic detail, featuring translocation as a most dynamic process. Mechanisms of initiation, both in bacterial and eukaryotic systems, translation termination, and novel details of the functions of the respective factors are described. Structure and interactions of the nascent peptide within, and emerging from, the ribosomal peptide exit tunnel are addressed in several articles. Structural and single-molecule studies reveal a picture of the ribosome exhibiting the energy landscape of a processive Brownian machine. The collection provides up-to-date reviews which will serve as a source of essential information for years to come.

Structures of Large RNA Molecules and Their Complexes

Author :
Publisher : Academic Press
ISBN 13 : 0128019360
Total Pages : 675 pages
Book Rating : 4.1/5 (28 download)

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Book Synopsis Structures of Large RNA Molecules and Their Complexes by :

Download or read book Structures of Large RNA Molecules and Their Complexes written by and published by Academic Press. This book was released on 2015-06-06 with total page 675 pages. Available in PDF, EPUB and Kindle. Book excerpt: This new volume of Methods in Enzymology continues the legacy of this premier serial with quality chapters authored by leaders in the field. This volume covers research methods in RNA folding and dynamics, RNA-protein interactions and large RNPs. Continues the legacy of this premier serial with quality chapters on structures of large RNA molecules and their complexes

Biophysical, Chemical, and Functional Probes of RNA Structure, Interactions and Folding:

Author : Daniel Herschlag
Publisher : Academic Press
ISBN 13 : 9780080922133
Total Pages : 496 pages
Book Rating : 4.9/5 (221 download)

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Book Synopsis Biophysical, Chemical, and Functional Probes of RNA Structure, Interactions and Folding: by : Daniel Herschlag

Download or read book Biophysical, Chemical, and Functional Probes of RNA Structure, Interactions and Folding: written by Daniel Herschlag and published by Academic Press. This book was released on 2009-11-16 with total page 496 pages. Available in PDF, EPUB and Kindle. Book excerpt: This MIE volume provides laboratory techniques that aim to predict the structure of a protein which can have tremendous implications ranging from drug design, to cellular pathways and their dynamics, to viral entry into cells. Expert researchers introduce the most advanced technologies and techniques in protein structure and folding Includes techniques on tiling assays

RNA Structure and Folding

Author : Dagmar Klostermeier
Publisher : Walter de Gruyter
ISBN 13 : 3110284952
Total Pages : 432 pages
Book Rating : 4.1/5 (12 download)

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Book Synopsis RNA Structure and Folding by : Dagmar Klostermeier

Download or read book RNA Structure and Folding written by Dagmar Klostermeier and published by Walter de Gruyter. This book was released on 2013-10-14 with total page 432 pages. Available in PDF, EPUB and Kindle. Book excerpt: While structure-function relationships of proteins have been studied for a long time, structural studies of RNA face additional challenges. Nevertheless, with the continuous discovery of novel RNA molecules with key cellular functions and of novel pathways and interaction networks, the need for structural information of RNA is still increasing. This volume provides an introduction into techniques to assess structure and folding of RNA. Each chapter explains the theoretical background of one technique, and illustrates possibilities and limitations in selected application examples.

RNA Infrastructure and Networks

Author : Lesley J. Collins
Publisher : Springer Science & Business Media
ISBN 13 : 1461403324
Total Pages : 297 pages
Book Rating : 4.4/5 (614 download)

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Book Synopsis RNA Infrastructure and Networks by : Lesley J. Collins

Download or read book RNA Infrastructure and Networks written by Lesley J. Collins and published by Springer Science & Business Media. This book was released on 2011-09-15 with total page 297 pages. Available in PDF, EPUB and Kindle. Book excerpt: RNAs form complexes with proteins and other RNAs. The RNA‐infrastructure represents the spatiotemporal interaction of these proteins and RNAs in a cell‐wide network. RNA Infrastructure and Networks brings together these ideas to illustrate the scope of RNA‐based biology, and how connecting RNA mechanisms is a powerful tool to investigate regulatory pathways. This book is but a taste of the wide range of RNA‐based mechanisms that connect in the RNA infrastructure.

Riboswitch Discovery, Structure and Function

Author :
Publisher : Academic Press
ISBN 13 : 0128013354
Total Pages : 595 pages
Book Rating : 4.1/5 (28 download)

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Book Synopsis Riboswitch Discovery, Structure and Function by :

Download or read book Riboswitch Discovery, Structure and Function written by and published by Academic Press. This book was released on 2014-11-21 with total page 595 pages. Available in PDF, EPUB and Kindle. Book excerpt: This new volume of Methods in Enzymology continues the legacy of this premier serial with quality chapters authored by leaders in the field. This volume covers research methods in riboswitch discovery and validation, synthesis and sample prep methods for large RNAs, riboswitch structure and function methods, folding pathways and dynamics, and ligand interactions and thermodynamics. Continues the legacy of this premier serial with quality chapters authored by leaders in the field Covers research methods in riboswitch discovery, structure and function Contains sections on such topics as riboswitch discovery and validation, synthesis and sample prep methods for large RNAs, riboswitch structure and function methods, folding pathways and dynamics, ligand interactions and thermodynamics

Chemistry and Biology of Non-canonical Nucleic Acids

Author : Naoki Sugimoto
Publisher : John Wiley & Sons
ISBN 13 : 3527345213
Total Pages : 288 pages
Book Rating : 4.5/5 (273 download)

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Book Synopsis Chemistry and Biology of Non-canonical Nucleic Acids by : Naoki Sugimoto

Download or read book Chemistry and Biology of Non-canonical Nucleic Acids written by Naoki Sugimoto and published by John Wiley & Sons. This book was released on 2021-06-01 with total page 288 pages. Available in PDF, EPUB and Kindle. Book excerpt: Discover the fundamentals and intricacies of a subject at the interface of chemistry and biology with this authoritative resource Chemistry and Biology of Non-canonical Nucleic Acids delivers a comprehensive treatment of the chemistry and biology of non-canonical nucleic acids, including their history, structures, stabilities, properties, and functions. You'll learn about the role of these vital compounds in transcription, translation, regulation, telomeres, helicases, cancers, neurodegenerative diseases, therapeutic applications, nanotechnology, and more. An ideal resource for graduate students, researchers in physical, organic, analytical, and inorganic chemistry will learn about uncommon nucleic acids, become the common non-canonical nucleic acids that fascinate and engage academics and professionals in private industry. Split into 15 chapters covering a wide range of aspects of non-canonical nucleic acids, the book explains why these compounds exist at the forefront of a new research revolution at the intersection of chemistry and biology. Chemistry and Biology of Non-canonical Nucleic Acids also covers a broad range of topics critical to understanding these versatile and omnipresent chemicals, including: * A discussion of the dynamic regulation of biosystems by nucleic acids with non-canonical structures * The role played by nucleic acid structures in neurodegenerative diseases and various cancers * An exploration of the future outlook for the chemistry and biology of non-canonical nucleic acids * An introduction to the history of canonical and non-canonical structures of nucleic acids * An analysis of the physicochemical properties of non-canonical nucleic acids Perfect for biochemists, materials scientists, and bioengineers, Chemistry and Biology of Non-canonical Nucleic Acids will also earn a place in the libraries of medicinal and pharmaceutical chemists who wish to improve their understanding of life processes and the role that non-canonical nucleic acids play in them.

Handbook of RNA Biochemistry

Author : Roland K. Hartmann
Publisher : John Wiley & Sons
ISBN 13 : 3527327762
Total Pages : 1370 pages
Book Rating : 4.5/5 (273 download)

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Book Synopsis Handbook of RNA Biochemistry by : Roland K. Hartmann

Download or read book Handbook of RNA Biochemistry written by Roland K. Hartmann and published by John Wiley & Sons. This book was released on 2015-06-22 with total page 1370 pages. Available in PDF, EPUB and Kindle. Book excerpt: The second edition of a highly acclaimed handbook and ready reference. Unmatched in its breadth and quality, around 100 specialists from all over the world share their up-to-date expertise and experiences, including hundreds of protocols, complete with explanations, and hitherto unpublished troubleshooting hints. They cover all modern techniques for the handling, analysis and modification of RNAs and their complexes with proteins. Throughout, they bear the practising bench scientist in mind, providing quick and reliable access to a plethora of solutions for practical questions of RNA research, ranging from simple to highly complex. This broad scope allows the treatment of specialized methods side by side with basic biochemical techniques, making the book a real treasure trove for every researcher experimenting with RNA.

Evolutionary dynamics and pattern generation in the sequence and secondary structure of RNA

Author : Martijn Adriaan Huynen
Publisher :
ISBN 13 : 9789039301586
Total Pages : 105 pages
Book Rating : 4.3/5 (15 download)

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Book Synopsis Evolutionary dynamics and pattern generation in the sequence and secondary structure of RNA by : Martijn Adriaan Huynen

Download or read book Evolutionary dynamics and pattern generation in the sequence and secondary structure of RNA written by Martijn Adriaan Huynen and published by . This book was released on 1993 with total page 105 pages. Available in PDF, EPUB and Kindle. Book excerpt:

RNA

Author : D. Söll
Publisher : Elsevier
ISBN 13 : 9780080540627
Total Pages : 354 pages
Book Rating : 4.5/5 (46 download)

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Book Synopsis RNA by : D. Söll

Download or read book RNA written by D. Söll and published by Elsevier. This book was released on 2001-12-03 with total page 354 pages. Available in PDF, EPUB and Kindle. Book excerpt: This publication summarizes the current status of our understanding of RNA, with particular emphasis on the chemistry of this key biological molecule. The various RNAs covered are messenger RNA, ribosomal RNA, transfer RNA and RNA enzymes (ribozymes). The different chapters detail biophysical and chemical methods to investigate RNA structure and function, the synthesis of native and modified RNAs and the latest advances in our understanding of the vast array of biological processes in which RNA is involved.

RNA-ligand Interactions: Structural biology methods. Semisynthetic methodologies ; RNA structure determination ; Techniques for monitoring RNA conformation and dynamics ; Modeling tertiary structure

Download RNA-ligand Interactions: Structural biology methods. Semisynthetic methodologies ; RNA structure determination ; Techniques for monitoring RNA conformation and dynamics ; Modeling tertiary structure PDF Online Free

Author : Daniel Walter Celander
Publisher :
ISBN 13 :
Total Pages : 602 pages
Book Rating : 4.X/5 (4 download)

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Book Synopsis RNA-ligand Interactions: Structural biology methods. Semisynthetic methodologies ; RNA structure determination ; Techniques for monitoring RNA conformation and dynamics ; Modeling tertiary structure by : Daniel Walter Celander

Download or read book RNA-ligand Interactions: Structural biology methods. Semisynthetic methodologies ; RNA structure determination ; Techniques for monitoring RNA conformation and dynamics ; Modeling tertiary structure written by Daniel Walter Celander and published by . This book was released on 2000 with total page 602 pages. Available in PDF, EPUB and Kindle. Book excerpt: