Some Topics On Statistical Analysis Of Genetic Imprinting Data And Microbiome Compositional Data

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Metagenomics for Microbiology

Author : Jacques Izard
Publisher : Academic Press
ISBN 13 : 0124105084
Total Pages : 188 pages
Book Rating : 4.1/5 (241 download)

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Book Synopsis Metagenomics for Microbiology by : Jacques Izard

Download or read book Metagenomics for Microbiology written by Jacques Izard and published by Academic Press. This book was released on 2014-11-07 with total page 188 pages. Available in PDF, EPUB and Kindle. Book excerpt: Concisely discussing the application of high throughput analysis to move forward our understanding of microbial principles, Metagenomics for Microbiology provides a solid base for the design and analysis of omics studies for the characterization of microbial consortia. The intended audience includes clinical and environmental microbiologists, molecular biologists, infectious disease experts, statisticians, biostatisticians, and public health scientists. This book focuses on the technological underpinnings of metagenomic approaches and their conceptual and practical applications. With the next-generation genomic sequencing revolution increasingly permitting researchers to decipher the coding information of the microbes living with us, we now have a unique capacity to compare multiple sites within individuals and at higher resolution and greater throughput than hitherto possible. The recent articulation of this paradigm points to unique possibilities for investigation of our dynamic relationship with these cellular communities, and excitingly the probing of their therapeutic potential in disease prevention or treatment of the future. - Expertly describes the latest metagenomic methodologies and best-practices, from sample collection to data analysis for taxonomic, whole shotgun metagenomic, and metatranscriptomic studies - Includes clear-headed pointers and quick starts to direct research efforts and increase study efficacy, eschewing ponderous prose - Presented topics include sample collection and preparation, data generation and quality control, third generation sequencing, advances in computational analyses of shotgun metagenomic sequence data, taxonomic profiling of shotgun data, hypothesis testing, and mathematical and computational analysis of longitudinal data and time series. Past-examples and prospects are provided to contextualize the applications.

The Statistical Analysis of Compositional Data

Author : John Aitchison
Publisher :
ISBN 13 : 9781930665781
Total Pages : 416 pages
Book Rating : 4.6/5 (657 download)

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Book Synopsis The Statistical Analysis of Compositional Data by : John Aitchison

Download or read book The Statistical Analysis of Compositional Data written by John Aitchison and published by . This book was released on 2003 with total page 416 pages. Available in PDF, EPUB and Kindle. Book excerpt: Originally published in 1986, this text contains a new Foreword, extensive postscript detailing developments in the field since its first publication, and a selection of more recent literature references. The work provides a clear and systematic account of statistical methods designed to meet the special needs of the compositional data analyst. (Mathematics)

Principles of Nutrigenetics and Nutrigenomics

Author : Raffaele De Caterina
Publisher : Academic Press
ISBN 13 : 0128045876
Total Pages : 588 pages
Book Rating : 4.1/5 (28 download)

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Book Synopsis Principles of Nutrigenetics and Nutrigenomics by : Raffaele De Caterina

Download or read book Principles of Nutrigenetics and Nutrigenomics written by Raffaele De Caterina and published by Academic Press. This book was released on 2019-09-22 with total page 588 pages. Available in PDF, EPUB and Kindle. Book excerpt: Principles of Nutrigenetics and Nutrigenomics: Fundamentals for Individualized Nutrition is the most comprehensive foundational text on the complex topics of nutrigenetics and nutrigenomics. Edited by three leaders in the field with contributions from the most well-cited researchers conducting groundbreaking research in the field, the book covers how the genetic makeup influences the response to foods and nutrients and how nutrients affect gene expression. Principles of Nutrigenetics and Nutrigenomics: Fundamentals for Individualized Nutrition is broken into four parts providing a valuable overview of genetics, nutrigenetics, and nutrigenomics, and a conclusion that helps to translate research into practice. With an overview of the background, evidence, challenges, and opportunities in the field, readers will come away with a strong understanding of how this new science is the frontier of medical nutrition. Principles of Nutrigenetics and Nutrigenomics: Fundamentals for Individualized Nutrition is a valuable reference for students and researchers studying nutrition, genetics, medicine, and related fields. - Uniquely foundational, comprehensive, and systematic approach with full evidence-based coverage of established and emerging topics in nutrigenetics and nutrigenomics - Includes a valuable guide to ethics for genetic testing for nutritional advice - Chapters include definitions, methods, summaries, figures, and tables to help students, researchers, and faculty grasp key concepts - Companion website includes slide decks, images, questions, and other teaching and learning aids designed to facilitate communication and comprehension of the content presented in the book

Genome Data Analysis

Author : Ju Han Kim
Publisher : Springer
ISBN 13 : 9811319421
Total Pages : 367 pages
Book Rating : 4.8/5 (113 download)

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Book Synopsis Genome Data Analysis by : Ju Han Kim

Download or read book Genome Data Analysis written by Ju Han Kim and published by Springer. This book was released on 2019-04-30 with total page 367 pages. Available in PDF, EPUB and Kindle. Book excerpt: This textbook describes recent advances in genomics and bioinformatics and provides numerous examples of genome data analysis that illustrate its relevance to real world problems and will improve the reader’s bioinformatics skills. Basic data preprocessing with normalization and filtering, primary pattern analysis, and machine learning algorithms using R and Python are demonstrated for gene-expression microarrays, genotyping microarrays, next-generation sequencing data, epigenomic data, and biological network and semantic analyses. In addition, detailed attention is devoted to integrative genomic data analysis, including multivariate data projection, gene-metabolic pathway mapping, automated biomolecular annotation, text mining of factual and literature databases, and integrated management of biomolecular databases. The textbook is primarily intended for life scientists, medical scientists, statisticians, data processing researchers, engineers, and other beginners in bioinformatics who are experiencing difficulty in approaching the field. However, it will also serve as a simple guideline for experts unfamiliar with the new, developing subfield of genomic analysis within bioinformatics.

Next-Generation Sequencing Data Analysis

Author : Xinkun Wang
Publisher : CRC Press
ISBN 13 : 1482217899
Total Pages : 252 pages
Book Rating : 4.4/5 (822 download)

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Book Synopsis Next-Generation Sequencing Data Analysis by : Xinkun Wang

Download or read book Next-Generation Sequencing Data Analysis written by Xinkun Wang and published by CRC Press. This book was released on 2016-04-06 with total page 252 pages. Available in PDF, EPUB and Kindle. Book excerpt: A Practical Guide to the Highly Dynamic Area of Massively Parallel SequencingThe development of genome and transcriptome sequencing technologies has led to a paradigm shift in life science research and disease diagnosis and prevention. Scientists are now able to see how human diseases and phenotypic changes are connected to DNA mutation, polymorphi

Unravelling the Soil Microbiome

Author : Rama Kant Dubey
Publisher : Springer
ISBN 13 : 3030155161
Total Pages : 118 pages
Book Rating : 4.0/5 (31 download)

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Book Synopsis Unravelling the Soil Microbiome by : Rama Kant Dubey

Download or read book Unravelling the Soil Microbiome written by Rama Kant Dubey and published by Springer. This book was released on 2019-05-24 with total page 118 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book explores the significance of soil microbial diversity to understand its utility in soil functions, ecosystem services, environmental sustainability, and achieving the sustainable development goals. With a focus on agriculture and environment, the book highlights the importance of the microbial world by providing state-of-the-art technologies for examining the structural and functional attributes of soil microbial diversity for applications in healthcare, industrial biotechnology, and bioremediation studies. In seven chapters, the book will act as a primer for students, environmental biotechnologists, microbial ecologists, plant scientists, and agricultural microbiologists. Chapter 1 introduces readers to the soil microbiome, and chapter 2 discusses the below ground microbial world. Chapter 3 addresses various methods for exploring microbial diversity, chapter 4 discusses the genomics methods, chapter 5 provides the metaproteomics and metatranscriptomics approaches and chapter 6 details the bioinformatics tools for soil microbial community analysis, and chapter 7 concludes the text with future perspectives on further soil microbial uses and applications.

Genes and Obesity

Author :
Publisher : Academic Press
ISBN 13 : 0080962033
Total Pages : 417 pages
Book Rating : 4.0/5 (89 download)

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Book Synopsis Genes and Obesity by :

Download or read book Genes and Obesity written by and published by Academic Press. This book was released on 2010-12-17 with total page 417 pages. Available in PDF, EPUB and Kindle. Book excerpt: A number of genes have been identified that are associated with an increased body mass index (BMI), the standard measurement of obesity. By analyzing these genes, researchers hope to gain a better understanding of what causes obesity and develop ways to tackle the problem. The study of genes and obesity could lead to new treatments. Genes and Obesity reviews the latest developments in the field. - This series provides a forum for discussion of new discoveries, approaches, and ideas - Contributions from leading scholars and industry experts - Reference guide for researchers involved in molecular biology and related fields

Finding a Path to Safety in Food Allergy

Author : National Academies of Sciences, Engineering, and Medicine
Publisher : National Academies Press
ISBN 13 : 0309450314
Total Pages : 575 pages
Book Rating : 4.3/5 (94 download)

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Book Synopsis Finding a Path to Safety in Food Allergy by : National Academies of Sciences, Engineering, and Medicine

Download or read book Finding a Path to Safety in Food Allergy written by National Academies of Sciences, Engineering, and Medicine and published by National Academies Press. This book was released on 2017-05-27 with total page 575 pages. Available in PDF, EPUB and Kindle. Book excerpt: Over the past 20 years, public concerns have grown in response to the apparent rising prevalence of food allergy and related atopic conditions, such as eczema. Although evidence on the true prevalence of food allergy is complicated by insufficient or inconsistent data and studies with variable methodologies, many health care experts who care for patients agree that a real increase in food allergy has occurred and that it is unlikely to be due simply to an increase in awareness and better tools for diagnosis. Many stakeholders are concerned about these increases, including the general public, policy makers, regulatory agencies, the food industry, scientists, clinicians, and especially families of children and young people suffering from food allergy. At the present time, however, despite a mounting body of data on the prevalence, health consequences, and associated costs of food allergy, this chronic disease has not garnered the level of societal attention that it warrants. Moreover, for patients and families at risk, recommendations and guidelines have not been clear about preventing exposure or the onset of reactions or for managing this disease. Finding a Path to Safety in Food Allergy examines critical issues related to food allergy, including the prevalence and severity of food allergy and its impact on affected individuals, families, and communities; and current understanding of food allergy as a disease, and in diagnostics, treatments, prevention, and public policy. This report seeks to: clarify the nature of the disease, its causes, and its current management; highlight gaps in knowledge; encourage the implementation of management tools at many levels and among many stakeholders; and delineate a roadmap to safety for those who have, or are at risk of developing, food allergy, as well as for others in society who are responsible for public health.

The Handbook of Metabolic Phenotyping

Author : John C. Lindon
Publisher : Elsevier
ISBN 13 : 0128122943
Total Pages : 622 pages
Book Rating : 4.1/5 (281 download)

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Book Synopsis The Handbook of Metabolic Phenotyping by : John C. Lindon

Download or read book The Handbook of Metabolic Phenotyping written by John C. Lindon and published by Elsevier. This book was released on 2018-10-04 with total page 622 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Handbook of Metabolic Phenotyping is the definitive work on the rapidly developing subject of metabolic phenotyping. It explores in detail the wide array of analytical chemistry and statistical modeling techniques used in the field, coupled with surveys of the various application areas in human development, nutrition, disease, therapy, and epidemiology to create a comprehensive exploration of the area of study. It covers recent studies that integrate the various -omics data sets to derive a systems biology view. It also addresses current issues on standardization, assay and statistics validation, and data storage and sharing. Written by experts with many years of practice in the field who pioneered many of the approaches widely used today, The Handbook of Metabolic Phenotyping is a valuable resource for postgrads and research scientists studying and furthering the field of metabolomics. - Contains theoretical and practical explanations of all the main analytical chemistry techniques used in metabolic phenotyping - Explores, in detail, the many diverse statistical approaches used in the field - Offers practical tips for successfully conducting metabolic phenotyping studies - Features reviews of all of the various fields of activity relating to human studies

Modern Analysis of Biological Data

Author : Stanislav Pekár
Publisher : Masarykova univerzita
ISBN 13 : 8021081066
Total Pages : 259 pages
Book Rating : 4.0/5 (21 download)

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Book Synopsis Modern Analysis of Biological Data by : Stanislav Pekár

Download or read book Modern Analysis of Biological Data written by Stanislav Pekár and published by Masarykova univerzita. This book was released on 2016-01-01 with total page 259 pages. Available in PDF, EPUB and Kindle. Book excerpt: Kniha je zaměřena na regresní modely, konkrétně jednorozměrné zobecněné lineární modely (GLM). Je určena především studentům a kolegům z biologických oborů a vyžaduje pouze základní statistické vzdělání, jakým je např. jednosemestrový kurz biostatistiky. Text knihy obsahuje nezbytné minimum statistické teorie, především však řešení 18 reálných příkladů z oblasti biologie. Každý příklad je rozpracován od popisu a stanovení cíle přes vývoj statistického modelu až po závěr. K analýze dat je použit populární a volně dostupný statistický software R. Příklady byly záměrně vybrány tak, aby upozornily na leckteré problémy a chyby, které se mohou v průběhu analýzy dat vyskytnout. Zároveň mají čtenáře motivovat k tomu, jak o statistických modelech přemýšlet a jak je používat. Řešení příkladů si může čtenář vyzkoušet sám na datech, jež jsou dodávána spolu s knihou.

Comprehensive Natural Products III

Author :
Publisher : Elsevier
ISBN 13 : 0081026919
Total Pages : 4266 pages
Book Rating : 4.0/5 (81 download)

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Book Synopsis Comprehensive Natural Products III by :

Download or read book Comprehensive Natural Products III written by and published by Elsevier. This book was released on 2020-07-22 with total page 4266 pages. Available in PDF, EPUB and Kindle. Book excerpt: Comprehensive Natural Products III, Third Edition, Seven Volume Set updates and complements the previous two editions, including recent advances in cofactor chemistry, structural diversity of natural products and secondary metabolites, enzymes and enzyme mechanisms and new bioinformatics tools. Natural products research is a dynamic discipline at the intersection of chemistry and biology concerned with isolation, identification, structure elucidation, and chemical characteristics of naturally occurring compounds such as pheromones, carbohydrates, nucleic acids and enzymes. This book reviews the accumulated efforts of chemical and biological research to understand living organisms and their distinctive effects on health and medicine and to stimulate new ideas among the established natural products community. Provides readers with an in-depth review of current natural products research and a critical insight into the future direction of the field Bridges the gap in knowledge by covering developments in the field since the second edition published in 2010 Split into 7 sections on key topics to allow students, researchers and professionals to find relevant information quickly and easily Ensures that the knowledge within is easily understood by and applicable to a large audience

Fat Detection

Author : Jean-Pierre Montmayeur
Publisher : CRC Press
ISBN 13 : 1420067761
Total Pages : 646 pages
Book Rating : 4.4/5 (2 download)

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Book Synopsis Fat Detection by : Jean-Pierre Montmayeur

Download or read book Fat Detection written by Jean-Pierre Montmayeur and published by CRC Press. This book was released on 2009-09-14 with total page 646 pages. Available in PDF, EPUB and Kindle. Book excerpt: Presents the State-of-the-Art in Fat Taste TransductionA bite of cheese, a few potato chips, a delectable piece of bacon - a small taste of high-fat foods often draws you back for more. But why are fatty foods so appealing? Why do we crave them? Fat Detection: Taste, Texture, and Post Ingestive Effects covers the many factors responsible for the se

Field Guidelines for Genetic Experimental Designs in High-Throughput Sequencing

Author : Ana M. Aransay
Publisher : Springer
ISBN 13 : 3319313509
Total Pages : 404 pages
Book Rating : 4.3/5 (193 download)

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Book Synopsis Field Guidelines for Genetic Experimental Designs in High-Throughput Sequencing by : Ana M. Aransay

Download or read book Field Guidelines for Genetic Experimental Designs in High-Throughput Sequencing written by Ana M. Aransay and published by Springer. This book was released on 2016-06-02 with total page 404 pages. Available in PDF, EPUB and Kindle. Book excerpt: High throughput sequencing (HTS) technologies have conquered the genomics and epigenomics worlds. The applications of HTS methods are wide, and can be used to sequence everything from whole or partial genomes, transcriptomes, non-coding RNAs, ribosome profiling, to single-cell sequencing. Having such diversity of alternatives, there is a demand for information by research scientists without experience in HTS that need to choose the most suitable methodology or combination of platforms and to define their experimental designs to achieve their specific objectives. Field Guidelines for Genetic Experimental Designs in High-Throughput Sequencing aims to collect in a single volume all aspects that should be taken into account when HTS technologies are being incorporated into a research project and the reasons behind them. Moreover, examples of several successful strategies will be analyzed to make the point of the crucial features. This book will be of use to all scientist that are unfamiliar with HTS and want to incorporate such technologies to their research.

Microbiome, Immunity, Digestive Health and Nutrition

Author : Debasis Bagchi
Publisher : Academic Press
ISBN 13 : 0128222395
Total Pages : 537 pages
Book Rating : 4.1/5 (282 download)

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Book Synopsis Microbiome, Immunity, Digestive Health and Nutrition by : Debasis Bagchi

Download or read book Microbiome, Immunity, Digestive Health and Nutrition written by Debasis Bagchi and published by Academic Press. This book was released on 2022-07-21 with total page 537 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microbiome, Immunity, Digestive Health and Nutrition: Epidemiology, Pathophysiology, Prevention and Treatment addresses a wide range of topics related to the role of nutrition in achieving and maintaining a healthy gut microbiome. Written by leading experts in the field, the book outlines the various foods, minerals, vitamins, dietary fibers, prebiotics, probiotics, nutritional supplements, phytochemicals and drugs that improve gut health. It specifically addresses molecular and cellular mechanisms and pathways by which these nutritional components contribute to the physiology and functionality of a healthy gut microbiome and gut health. Intended for nutrition researchers and practitioners, food experts, gastroenterologists, nurses, general practitioners, public health officials and health professionals, this book is sure to be a welcomed resource. - Outlines the nutritional guidelines and healthy lifestyle that is important to boost gut health - Demonstrates the effects of diverse environmental stressors in the disruption of the gastrointestinal ecology - Discusses the molecular and immunological mechanisms associated with healthy gut microbiome functions - Addresses how to boost healthy gut microflora and microbiome - Suggests areas for future research of microbiome-based nutrition and therapies

Microbial Management of Plant Stresses

Author : Ajay Kumar
Publisher : Woodhead Publishing
ISBN 13 : 0323859208
Total Pages : 282 pages
Book Rating : 4.3/5 (238 download)

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Book Synopsis Microbial Management of Plant Stresses by : Ajay Kumar

Download or read book Microbial Management of Plant Stresses written by Ajay Kumar and published by Woodhead Publishing. This book was released on 2021-07-31 with total page 282 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microbial Management of Plant Stresses: Current Trends, Application and Challenges explores plant microbiota including isolated microbial communities that have been used to study the functional capacities, ecological structure and dynamics of the plant-microbe interaction with focus on agricultural crops. Presenting multiple examples and evidence of the potential genetic flexibility of microbial systems to counteract the climate induced stresses associated with their host as a part of indigenous system, this book presents strategies and approaches for improvement of microbiome. As climate changes have altered the global carbon cycling and ecological dynamics, the regular and periodic occurrences of severe salinity, drought, and heat stresses across the different regimes of the agro-ecological zones have put additional constraints on agricultural ecosystem to produce efficient foods and other derived products for rapidly growing world population through low cost and sustainable technology. Furthermore chemical amendments, agricultural inputs and other innovative technologies although may have fast results with fruitful effects for enhancing crop productivity but also have other ecological drawbacks and environmental issues and offer limited use opportunities. Microbial formulations and/or microbial consortia deploying two or multiple partners have been frequently used for mitigation of various stresses, however, field success is often variable and improvement Smart, knowledge-driven selection of microorganisms is needed as well as the use of suitable delivery approaches and formulations. Microbial Management of Plant Stresses: Current Trends, Application and Challenges presents the functional potential of plant microbiota to address current challenges in crop production addressing this urgent need to bring microbial innovations into practice. - Demonstrates microbial ecosystems as an indigenous system for improving plant growth, health and stress resilience - Covers all the novel aspects of microbial regulatory mechanism. Key challenges associated with microbial delivery and successful establishment for plant growth promotion and stress avoidance - Explores plant microbiome and the modulation of plant defense and ecological dynamics under stressed environment

The Interplay of Microbiome and Immune Response in Health and Diseases

Author : Gwendolyn Barcel´o-Coblijn
Publisher : MDPI
ISBN 13 : 3039216465
Total Pages : 206 pages
Book Rating : 4.0/5 (392 download)

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Book Synopsis The Interplay of Microbiome and Immune Response in Health and Diseases by : Gwendolyn Barcel´o-Coblijn

Download or read book The Interplay of Microbiome and Immune Response in Health and Diseases written by Gwendolyn Barcel´o-Coblijn and published by MDPI. This book was released on 2019-11-06 with total page 206 pages. Available in PDF, EPUB and Kindle. Book excerpt: [Increasing evidence suggests that microbiota and especially the gut microbiota (the microbes inhabiting the gut including bacteria, archaea, viruses, and fungi) plays a key role in human physiology and pathology. Recent findings indicate how dysbiosis—an imbalance in the composition and organization of microbial populations—could severely impact the development of different medical conditions (from metabolic to mood disorders), providing new insights into the comprehension of diverse diseases, such as IBD, obesity, asthma, autism, stroke, diabetes, and cancer. Given that microbial cells in the gut outnumber host cells, microbiota influences human physiology both functionally and structurally. Microbial metabolites bridge various—even distant—areas of the organism by way of the immune and hormone system. For instance, it is now clear that the mutual interaction between the gastrointestinal tract and the brain (gut–brain axis), often involves gut microbiota, indicating that the crosstalk between the organism and its microbial residents represents a fundamental aspect of both the establishment and maintenance of healthy conditions. Moreover, it is crucial to recognize that beyond the intestinal tract, microbiota populates other host organs and tissues (e.g., skin and oral mucosa). We have edited this eBook with the aim of publishing manuscripts focusing on the impact of microbiota in the development of different diseases and their associated treatments.]

The State of Food Security and Nutrition in the World 2018

Author : Food and Agriculture Organization of the United Nations
Publisher : Food & Agriculture Org.
ISBN 13 : 9251305722
Total Pages : 278 pages
Book Rating : 4.2/5 (513 download)

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Book Synopsis The State of Food Security and Nutrition in the World 2018 by : Food and Agriculture Organization of the United Nations

Download or read book The State of Food Security and Nutrition in the World 2018 written by Food and Agriculture Organization of the United Nations and published by Food & Agriculture Org.. This book was released on 2018-09-14 with total page 278 pages. Available in PDF, EPUB and Kindle. Book excerpt: New evidence this year corroborates the rise in world hunger observed in this report last year, sending a warning that more action is needed if we aspire to end world hunger and malnutrition in all its forms by 2030. Updated estimates show the number of people who suffer from hunger has been growing over the past three years, returning to prevailing levels from almost a decade ago. Although progress continues to be made in reducing child stunting, over 22 percent of children under five years of age are still affected. Other forms of malnutrition are also growing: adult obesity continues to increase in countries irrespective of their income levels, and many countries are coping with multiple forms of malnutrition at the same time – overweight and obesity, as well as anaemia in women, and child stunting and wasting.