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Sequencing Theory
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Download or read book Sequencing Theory written by S. Ashour and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 141 pages. Available in PDF, EPUB and Kindle. Book excerpt: The intent of these notes is to provide an appreciation of sequencing theory, and to develop an awareness of the combinatorial aspects of sequencing problems. An under standing of the ideas and concepts presented in these notes will provide the necessary background to enable further study in this rapidly growing subject. These notes have been used as a part of one-semester C0urses in Operations Research for both senior and first-year graduate students. Following the introductory chapter, several classes of scheduling models are discussed in Chapter 2. Chapter 3 is devoted to discussing the characteristics of several types of criteria that have been proposed in the literature. Because of the importance of the combinatorial properties in the analysis of scheduling models, various combinatorial aspects are treated in Chapter 4. The primary objective of such a treatment is to provide the reader with an insight into the nature of the problem. Due to the tremendous number of sequences involved, and the fact that many sequences have the same schedule time, statistical sampling has elicited a great deal of theoretical studies. Two such studies, one of which has evolved from my research, are reported in Chapter 5. Many references to basic sources are cited at the end of each chapter to provide a guide for further readings. I am indebted to Professor Santa Arora of the University of Minnesota who intro duced me to the subject during my graduate career.
Book Synopsis Advances in Sequence Analysis: Theory, Method, Applications by : Philippe Blanchard
Download or read book Advances in Sequence Analysis: Theory, Method, Applications written by Philippe Blanchard and published by Springer. This book was released on 2014-07-02 with total page 308 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book gives a general view of sequence analysis, the statistical study of successions of states or events. It includes innovative contributions on life course studies, transitions into and out of employment, contemporaneous and historical careers, and political trajectories. The approach presented in this book is now central to the life-course perspective and the study of social processes more generally. This volume promotes the dialogue between approaches to sequence analysis that developed separately, within traditions contrasted in space and disciplines. It includes the latest developments in sequential concepts, coding, atypical datasets and time patterns, optimal matching and alternative algorithms, survey optimization, and visualization. Field studies include original sequential material related to parenting in 19th-century Belgium, higher education and work in Finland and Italy, family formation before and after German reunification, French Jews persecuted in occupied France, long-term trends in electoral participation, and regime democratization. Overall the book reassesses the classical uses of sequences and it promotes new ways of collecting, formatting, representing and processing them. The introduction provides basic sequential concepts and tools, as well as a history of the method. Chapters are presented in a way that is both accessible to the beginner and informative to the expert.
Book Synopsis A Logical Approach to Discrete Math by : David Gries
Download or read book A Logical Approach to Discrete Math written by David Gries and published by Springer Science & Business Media. This book was released on 2013-03-14 with total page 517 pages. Available in PDF, EPUB and Kindle. Book excerpt: Here, the authors strive to change the way logic and discrete math are taught in computer science and mathematics: while many books treat logic simply as another topic of study, this one is unique in its willingness to go one step further. The book traets logic as a basic tool which may be applied in essentially every other area.
Book Synopsis Sequence Comparison by : Kun-Mao Chao
Download or read book Sequence Comparison written by Kun-Mao Chao and published by Springer Science & Business Media. This book was released on 2008-11-27 with total page 218 pages. Available in PDF, EPUB and Kindle. Book excerpt: Biomolecular sequence comparison is the origin of bioinformatics. This book gives a complete in-depth treatment of the study of sequence comparison. A comprehensive introduction is followed by a focus on alignment algorithms and techniques, proceeded by a discussion of the theory. The book examines alignment methods and techniques, features a new issue of sequence comparison - the spaced seed technique, addresses several new flexible strategies for coping with various scoring schemes, and covers the theory on the significance of high-scoring segment pairs between two unalignment sequences. Useful appendices on basic concepts in molecular biology, primer in statistics and software for sequence alignment are included in this reader-friendly text, as well as chapter-ending exercise and research questions A state-of-the-art study of sequence alignment and homology search, this is an ideal reference for advanced students studying bioinformatics and will appeal to biologists who wish to know how to use homology search tools.
Book Synopsis Sequence — Evolution — Function by : Eugene V. Koonin
Download or read book Sequence — Evolution — Function written by Eugene V. Koonin and published by Springer Science & Business Media. This book was released on 2013-06-29 with total page 482 pages. Available in PDF, EPUB and Kindle. Book excerpt: Sequence - Evolution - Function is an introduction to the computational approaches that play a critical role in the emerging new branch of biology known as functional genomics. The book provides the reader with an understanding of the principles and approaches of functional genomics and of the potential and limitations of computational and experimental approaches to genome analysis. Sequence - Evolution - Function should help bridge the "digital divide" between biologists and computer scientists, allowing biologists to better grasp the peculiarities of the emerging field of Genome Biology and to learn how to benefit from the enormous amount of sequence data available in the public databases. The book is non-technical with respect to the computer methods for genome analysis and discusses these methods from the user's viewpoint, without addressing mathematical and algorithmic details. Prior practical familiarity with the basic methods for sequence analysis is a major advantage, but a reader without such experience will be able to use the book as an introduction to these methods. This book is perfect for introductory level courses in computational methods for comparative and functional genomics.
Book Synopsis Principles of Sequencing and Scheduling by : Kenneth R. Baker
Download or read book Principles of Sequencing and Scheduling written by Kenneth R. Baker and published by John Wiley & Sons. This book was released on 2018-10-19 with total page 661 pages. Available in PDF, EPUB and Kindle. Book excerpt: An updated edition of the text that explores the core topics in scheduling theory The second edition of Principles of Sequencing and Scheduling has been revised and updated to provide comprehensive coverage of sequencing and scheduling topics as well as emerging developments in the field. The text offers balanced coverage of deterministic models and stochastic models and includes new developments in safe scheduling and project scheduling, including coverage of project analytics. These new topics help bridge the gap between classical scheduling and actual practice. The authors—noted experts in the field—present a coherent and detailed introduction to the basic models, problems, and methods of scheduling theory. This book offers an introduction and overview of sequencing and scheduling and covers such topics as single-machine and multi-machine models, deterministic and stochastic problem formulations, optimization and heuristic solution approaches, and generic and specialized software methods. This new edition adds coverage on topics of recent interest in shop scheduling and project scheduling. This important resource: Offers comprehensive coverage of deterministic models as well as recent approaches and developments for stochastic models Emphasizes the application of generic optimization software to basic sequencing problems and the use of spreadsheet-based optimization methods Includes updated coverage on safe scheduling, lognormal modeling, and job selection Provides basic coverage of robust scheduling as contrasted with safe scheduling Adds a new chapter on project analytics, which supports the PERT21 framework for project scheduling in a stochastic environment. Extends the coverage of PERT 21 to include hierarchical scheduling Provides end-of-chapter references and access to advanced Research Notes, to aid readers in the further exploration of advanced topics Written for upper-undergraduate and graduate level courses covering such topics as scheduling theory and applications, project scheduling, and operations scheduling, the second edition of Principles of Sequencing and Scheduling is a resource that covers scheduling techniques and contains the most current research and emerging topics.
Book Synopsis Instructional-design Theories and Models: A new paradigm of instructional theory by : Charles M. Reigeluth
Download or read book Instructional-design Theories and Models: A new paradigm of instructional theory written by Charles M. Reigeluth and published by Psychology Press. This book was released on 1983 with total page 730 pages. Available in PDF, EPUB and Kindle. Book excerpt: This second edition focuses on the new generations of instructional theories and models. The theme of this volume is diversity, it includes the role of values and different kinds of learning, and how they influence instructional theory and design.
Book Synopsis Biological Sequence Analysis by : Richard Durbin
Download or read book Biological Sequence Analysis written by Richard Durbin and published by Cambridge University Press. This book was released on 1998-04-23 with total page 372 pages. Available in PDF, EPUB and Kindle. Book excerpt: Probabilistic models are becoming increasingly important in analysing the huge amount of data being produced by large-scale DNA-sequencing efforts such as the Human Genome Project. For example, hidden Markov models are used for analysing biological sequences, linguistic-grammar-based probabilistic models for identifying RNA secondary structure, and probabilistic evolutionary models for inferring phylogenies of sequences from different organisms. This book gives a unified, up-to-date and self-contained account, with a Bayesian slant, of such methods, and more generally to probabilistic methods of sequence analysis. Written by an interdisciplinary team of authors, it aims to be accessible to molecular biologists, computer scientists, and mathematicians with no formal knowledge of the other fields, and at the same time present the state-of-the-art in this new and highly important field.
Book Synopsis Principles of Sequencing and Scheduling by : Kenneth R. Baker
Download or read book Principles of Sequencing and Scheduling written by Kenneth R. Baker and published by John Wiley & Sons. This book was released on 2013-06-05 with total page 407 pages. Available in PDF, EPUB and Kindle. Book excerpt: An up-to-date and comprehensive treatment of the fundamentals of scheduling theory, including recent advances and state-of-the-art topics Principles of Sequencing and Scheduling strikes a unique balance between theory and practice, providing an accessible introduction to the concepts, methods, and results of scheduling theory and its core topics. With real-world examples and up-to-date modeling techniques, the book equips readers with the basic knowledge needed for understanding scheduling theory and delving into its applications. The authors begin with an introduction and overview of sequencing and scheduling, including single-machine sequencing, optimization and heuristic solution methods, and models with earliness and tardiness penalties. The most current material on stochastic scheduling, including correct scheduling of safety time and the use of simulation for optimization, is then presented and integrated with deterministic models. Additional topical coverage includes: Extensions of the basic model Parallel-machine models Flow shop scheduling Scheduling groups of jobs The job shop problem Simulation models for the dynamic job shop Network methods for project scheduling Resource-constrained project scheduling Stochastic and safe scheduling Extensive end-of-chapter exercises are provided, some of which are spreadsheet-oriented, and link scheduling theory to the most popular analytic platform among today's students and practitioners—the Microsoft Office Excel® spreadsheet. Extensive references direct readers to additional literature, and the book's related Web site houses material that reinforces the book's concepts, including research notes, data sets, and examples from the text. Principles of Sequencing and Scheduling is an excellent book for courses on sequencing and scheduling at the upper-undergraduate and graduate levels. It is also a valuable reference for researchers and practitioners in the fields of statistics, computer science, operations research, and engineering.
Book Synopsis Sequencing and Prediction of Adolescent Soft Drug Initiation: Systematic Review, Quantitative Investigation, and Dual Cross-Validation by : Rebecca J. Howell
Download or read book Sequencing and Prediction of Adolescent Soft Drug Initiation: Systematic Review, Quantitative Investigation, and Dual Cross-Validation written by Rebecca J. Howell and published by Universal-Publishers. This book was released on 2010-06-03 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: In providing a comprehensive investigation of alcohol, cigarette, and marijuana initiation among adolescents, the overarching goals of the research were to build upon extant findings, address important gaps found in the literature, and contribute to the prevention science knowledge base. A four-fold purpose founded the study: 1) provide a systematic review of the soft drug initiation literature; 2) test a modified version of Kandel's (2002) drug sequencing hypothesis; 3) determine if predictors of soft drug initiation differ in kind or saliency by biological age and drug type; and 4) examine age- and drug- specific determinants of the timing at which soft drug initiation occurs. Supplemental attention also was directed at evaluating the utility of Petraitis et al.'s (1995) distal-proximal mediation hypothesis. Through the quantitative component of the research, nine hypotheses were tested. Cross-sectional data were derived from a rural sample of 6th, 9th, and 12th grade students who completed the 2004 Primary Prevention Awareness, Attitude, and Use Survey (PPAAUS). All of the hypotheses obtained some degree of support; more support was yielded for the specific risk factor hypothesis than the common factor model, and convincing evidence was obtained for Kandel's drug sequencing hypothesis and Petraitis et al.'s distal-proximal mediation hypothesis. The findings also supported the bulk of the directional hypotheses and several of the direct and indirect effects propositions put forth in social learning theory, the social development model, and the theory of planned behavior. In contrast, the results called into question some of the direct effects articulated in Hirschi's original statement of social control and underscored some possible limits of the social development model. In an effort to gauge the validity of the findings, a dual cross-validation scheme was employed. The systematic review cross-validation involved comparing the quantitative findings for two major hypotheses to those yielded from 36 primary studies examined in the systematic review. Through a further quantitative cross-validation, the findings for the major and supplemental hypotheses were compared to those derived from a sample of 6th, 9th and 12th grade students who completed the 2001 PPAAUS. On balance, a relatively strong degree of convergence was obtained. This confluence served to bolster the reliability and validity of the results. Policy and programmatic implications also were indicated.
Book Synopsis Scheduling Theory. Single-Stage Systems by : V. Tanaev
Download or read book Scheduling Theory. Single-Stage Systems written by V. Tanaev and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 382 pages. Available in PDF, EPUB and Kindle. Book excerpt: Scheduling theory is an important branch of operations research. Problems studied within the framework of that theory have numerous applications in various fields of human activity. As an independent discipline scheduling theory appeared in the middle of the fifties, and has attracted the attention of researchers in many countries. In the Soviet Union, research in this direction has been mainly related to production scheduling, especially to the development of automated systems for production control. In 1975 Nauka ("Science") Publishers, Moscow, issued two books providing systematic descriptions of scheduling theory. The first one was the Russian translation of the classical book Theory of Scheduling by American mathematicians R. W. Conway, W. L. Maxwell and L. W. Miller. The other one was the book Introduction to Scheduling Theory by Soviet mathematicians V. S. Tanaev and V. V. Shkurba. These books well complement each other. Both. books well represent major results known by that time, contain an exhaustive bibliography on the subject. Thus, the books, as well as the Russian translation of Computer and Job-Shop Scheduling Theory edited by E. G. Coffman, Jr., (Nauka, 1984) have contributed to the development of scheduling theory in the Soviet Union. Many different models, the large number of new results make it difficult for the researchers who work in related fields to follow the fast development of scheduling theory and to master new methods and approaches quickly.
Book Synopsis Screenwriting by : Paul Joseph Gulino
Download or read book Screenwriting written by Paul Joseph Gulino and published by Bloomsbury Publishing USA. This book was released on 2013-09-23 with total page 330 pages. Available in PDF, EPUB and Kindle. Book excerpt: The great challenge in writing a feature-length screenplay is sustaining audience involvement from page one through 120. Screenwriting: The Sequence Approach expounds on an often-overlooked tool that can be key in solving this problem. A screenplay can be understood as being built of sequences of about fifteen pages each, and by focusing on solving the dramatic aspects of each of these sequences in detail, a writer can more easily conquer the challenges posed by the script as a whole. The sequence approach has its foundation in early Hollywood cinema (until the 1950s, most screenplays were formatted with sequences explicitly identified), and has been rediscovered and used effectively at such film schools as the University of Southern California, Columbia University and Chapman University. This book exposes a wide audience to the approach for the first time, introducing the concept then providing a sequence analysis of eleven significant feature films made between 1940 and 2000: The Shop Around The Corner / Double Indemnity / Nights of Cabiria / North By Northwest / Lawrence of Arabia / The Graduate / One Flew Over the Cuckoo's Nest / Toy Story / Air Force One / Being John Malkovich / The Fellowship of the Ring
Book Synopsis DNA Sequencing Protocols by : Annette M. Griffin
Download or read book DNA Sequencing Protocols written by Annette M. Griffin and published by Springer Science & Business Media. This book was released on 2008-02-02 with total page 386 pages. Available in PDF, EPUB and Kindle. Book excerpt: The purpose of DNA Sequencing Protocols is to provide detailed practical procedures for the widest range of DNA sequencing meth ods, and we believe that all the vanguard techniques now being applied in this fast-evolving field are comprehensively covered. Sequencing technology has advanced at a phenomenal rate since the original methods were first described in the late 1970s and there is now a huge variety of strategies and methods that can be employed to determine the sequence of any DNA of interest. More recently, a large number of new and innovative sequencing techniques have been developed, including the use of such novel polymerases as Tag poly merase and Sequenase, the harnessing of PCR technology for linear amplification (cycle) sequencing, and the advent of automated DNA sequencers. DNA sequencing is surely one of the most important techniques in the molecular biology laboratory. Sequence analysis is providing an increasingly useful approach to the characterization of biological systems, and major multinational projects are already underway to map and sequence the entire genome of organisms, such as Escherichia coli, Saccharomyces cerevisiae, Caenorhabditis elegans, and Homo sapiens. Most scientists recognize the importance of DNA sequence data and perceive DNA sequencing as a valuable and indispensable aspect of their work. Recent technological advances, especially in the area of automated sequencing, have removed much of the drudg ery that was formerly associated with the technique, whereas innova tive computer software has greatly simplified the analysis and manipulation of sequence data.
Book Synopsis Nanopore Sequencing: An Introduction by : Daniel Branton
Download or read book Nanopore Sequencing: An Introduction written by Daniel Branton and published by World Scientific. This book was released on 2019-04-05 with total page 217 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is an introductory text and laboratory manual to be used primarily in undergraduate courses. It is also useful for graduate students and research scientists who require an introduction to the theory and methods of nanopore sequencing. The book has clear explanations of the principles of this emerging technology, together with instructional material written by experts that describes how to use a MinION nanopore instrument for sequencing in research or the classroom.At Harvard University the book serves as a textbook and lab manual for a university laboratory course designed to intensify the intellectual experience of incoming undergraduates while exploring biology as a field of concentration. Nanopore sequencing is an ideal topic as a path to encourage students about the range of courses they will take in Biology by pre-emptively addressing the complaint about having to take a course in Physics or Maths while majoring in Biology. The book addresses this complaint by concretely demonstrating the range of topics — from electricity to biochemistry, protein structure, molecular engineering, and informatics — that a student will have to master in subsequent courses if he or she is to become a scientist who truly understands what his or her biology instrument is measuring when investigating biological phenomena.
Book Synopsis Library of Congress Subject Headings by : Library of Congress. Cataloging Policy and Support Office
Download or read book Library of Congress Subject Headings written by Library of Congress. Cataloging Policy and Support Office and published by . This book was released on 2004 with total page 1662 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis The Work and Workings of Human Communication by : Robert E. Sanders
Download or read book The Work and Workings of Human Communication written by Robert E. Sanders and published by John Wiley & Sons. This book was released on 2021-04-13 with total page 308 pages. Available in PDF, EPUB and Kindle. Book excerpt: Discover the fundamentals of human communication with this comprehensive and insightful resource Written in four sections, The Work and Workings of Human Communication identifies the underlying fundamentals that make our communication distinctively human. These fundamentals are the common ground that tie together the many topics and subject matters covered by the study and discipline of communication. They are also the basis of the unique contribution of the communication discipline to the social sciences. Professor, researcher and theorist Robert E. Sanders starts by focusing on what is unique about human communication and moves on to an examination of the complexities of scientific inquiry in the social sciences in general and in the communication discipline specifically. At the heart of the matter is the fact that humans are thinking beings who can make choices and therefore are not entirely predictable. This points towards new topics and questions that are likely to arise as the discipline evolves. Sanders’ approach leads to recognition of the fact that communication is at the center of how humans build our ways of life and participate together. By focusing on the underlying fundamentals that give rise to the discipline’s topics and subject areas, The Work and Workings of Human Communication encourages students to engage in independent thought about what they want to contribute by: Emphasizing the importance of communication in creating, sustaining or changing—and participating in—our ways of life on an interpersonal level and on a societal level Recognizing that human communication is inherently collaborative; people affect situations by interacting with others, not acting on others Explaining the history, current agendas and possible future of the social science side of the Communication discipline A perfect resource for new graduate students in introductory communication courses who have an interest in the social science side of the discipline, The Work and Workings of Human Communication is also highly valuable for undergraduate communication and liberal arts students who don’t possess a background in the discipline.
Author :C. Alexander Valencia Publisher :Springer Science & Business Media ISBN 13 :1461490324 Total Pages :101 pages Book Rating :4.4/5 (614 download)
Book Synopsis Next Generation Sequencing Technologies in Medical Genetics by : C. Alexander Valencia
Download or read book Next Generation Sequencing Technologies in Medical Genetics written by C. Alexander Valencia and published by Springer Science & Business Media. This book was released on 2013-10-16 with total page 101 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book introduces readers to Next Generation Sequencing applications in medical genetics. The authors discuss the direct application of next-generation sequencing to medicine, specifically, laboratory medicine or molecular diagnostics. The first part of the book contains chapters on sanger sequencing, NGS technologies, targeted-amplification and capture, and exome sequencing. The second part of the book focuses on genetic disorders diagnoses by NGS, prenatal diagnosis, muscular dystrophies, mitochondrial disorders diagnosis, and challenges in molecular diagnosis. Recent developments and potential future trends in NGS sequencing applications are highlighted, as well.
