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Review Of Metabolic Data
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Book Synopsis Metabolomics in Practice by : Michael Lämmerhofer
Download or read book Metabolomics in Practice written by Michael Lämmerhofer and published by John Wiley & Sons. This book was released on 2013-02-14 with total page 423 pages. Available in PDF, EPUB and Kindle. Book excerpt: Unlike other handbooks in this emerging field, this guide focuses on the challenges and critical parameters in running a metabolomics study, including such often-neglected issues as sample preparation, choice of separation and detection method, recording and evaluating data as well as method validation. By systematically covering the entire workflow, from sample preparation to data processing, the insight and advice offered here helps to clear the hurdles in setting up and running a successful analysis, resulting in high-quality data from every experiment. Based on more than a decade of practical experience in developing, optimizing and validating metabolomics approaches as a routine technology in the academic and industrial research laboratory, the lessons taught here are highly relevant for all systems-level approaches, whether in systems biology, biotechnology, toxicology or pharmaceutical sciences. From the Contents: * Sampling and Sample Preparation in Microbial Metabolomics * Tandem Mass Spectrometry Hyphenated with HPLC and UHPLC for Targeted Metabolomics * GC-MS, LC-MS, CE-MS and Ultrahigh Resolution MS (FTICR-MS) in Metabolomics * NMR-based metabolomics analysis * Potential of Microfluidics and Single Cell Analysis in Metabolomics * Data Processing in Metabolomics * Validation and Measurement Uncertainty in Metabolomic Studies * Metabolomics and its Role in the Study of Mammalian Systems and in Plant Sciences * Metabolomics in Biotechnology and Nutritional Metabolomics and more.
Download or read book Review of Metabolic Data written by and published by . This book was released on 1986 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis The Handbook of Metabolic Phenotyping by : John C. Lindon
Download or read book The Handbook of Metabolic Phenotyping written by John C. Lindon and published by Elsevier. This book was released on 2018-10-04 with total page 619 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Handbook of Metabolic Phenotyping is the definitive work on the rapidly developing subject of metabolic phenotyping. It explores in detail the wide array of analytical chemistry and statistical modeling techniques used in the field, coupled with surveys of the various application areas in human development, nutrition, disease, therapy, and epidemiology to create a comprehensive exploration of the area of study. It covers recent studies that integrate the various -omics data sets to derive a systems biology view. It also addresses current issues on standardization, assay and statistics validation, and data storage and sharing. Written by experts with many years of practice in the field who pioneered many of the approaches widely used today, The Handbook of Metabolic Phenotyping is a valuable resource for postgrads and research scientists studying and furthering the field of metabolomics. Contains theoretical and practical explanations of all the main analytical chemistry techniques used in metabolic phenotyping Explores, in detail, the many diverse statistical approaches used in the field Offers practical tips for successfully conducting metabolic phenotyping studies Features reviews of all of the various fields of activity relating to human studies
Download or read book Metabolomics written by Wolfram Weckwerth and published by Springer Science & Business Media. This book was released on 2008-02-04 with total page 290 pages. Available in PDF, EPUB and Kindle. Book excerpt: Metabolomics: Methods and Protocols examines the state-of-the-art in metabolomic analysis. Leading researchers in the field present protocols for the application of complementary analytical methods, such as gas chromatography-mass spectrometry (GC-MS). Metabolomics: Methods and Protocols contains forward-looking protocols, which provide the essential groundwork for future efforts in elucidating the structure of the unknowns detected in metabolomic studies.
Download or read book Metabolomics written by Ron Wehrens and published by CRC Press. This book was released on 2019-08-19 with total page 313 pages. Available in PDF, EPUB and Kindle. Book excerpt: Metabolomics is the scientific study of the chemical processes in a living system, environment and nutrition. It is a relatively new omics science, but the potential applications are wide, including medicine, personalized medicine and intervention studies, food and nutrition, plants, agriculture and environmental science. The topics presented and discussed in this book are based on the European Molecular Biology Organization (EMBO) practical courses in metabolomics bioinformatics taught to those working in the field, from masters to postgraduate students, PhDs, postdoctoral and early PIs. The book covers the basics and fundamentals of data acquisition and analytical technologies, but the primary focus is data handling and data analysis. The mentioning and usage of a particular data analysis tool has been avoided; rather, the focus is on the concepts and principles of data processing and analysis. The material has been class-tested and includes lots of examples, computing and exercises. Key Features: Provides an overview of qualitative /quantitative methods in metabolomics Offers an introduction to the key concepts of metabolomics, including experimental design and technology Covers data handling, processing, analysis, data standards and sharing Contains lots of examples to illustrate the topics Includes contributions from some of the leading researchers in the field of metabolomics with extensive teaching experiences
Book Synopsis High-Throughput Metabolomics by : Angelo D'Alessandro
Download or read book High-Throughput Metabolomics written by Angelo D'Alessandro and published by Humana. This book was released on 2020-06-06 with total page 459 pages. Available in PDF, EPUB and Kindle. Book excerpt: This detailed volume focuses on recent technological, computational, and biostatistical advances in the field of high-throughput metabolomics. Chapters encompass methods, platforms, and analytical strategies for steady state measurements and metabolic flux analysis with stable isotope-labeled tracers, in biological matrices of clinical relevance and model organisms. Mass spectrometry-based or orthogonal methods are discussed, along with computational and statistical methods to address data sparsity in high-throughput metabolomics approaches. As a part of the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, High-Throughput Metabolomics: Methods and Protocols provides tools that can bring about the next generation of clinical biochemistry in a cost-effective, rigorous fashion, exponentially advancing our capacity to investigate nature while hastening the advent of personalized medicine.
Book Synopsis Metabolism at a Glance by : J. G. Salway
Download or read book Metabolism at a Glance written by J. G. Salway and published by John Wiley & Sons. This book was released on 2017-02-06 with total page 147 pages. Available in PDF, EPUB and Kindle. Book excerpt: Metabolism at a Glance presents a concise, illustrated summary of metabolism in health and disease. This essential text is progressively appropriate for introductory through to advanced medical and biochemistry courses. It also provides a succinct review of inborn errors of metabolism, and reference for postgraduate medical practitioners and biomedical scientists who need a resource to quickly refresh their knowledge. Fully updated and extensively illustrated, this new edition of Metabolism at a Glance is now in full colour throughout, and includes new coverage of sports biochemistry; the metabolism of lipids, carbohydrates and cholesterol; glyceroneogenesis, α-oxidation and ω-oxidation of fatty acids. It also features the overlooked “Krebs Uric Acid Cycle”. Metabolism at a Glance offers an accessible introduction to metabolism, and is ideal as a revision aid for students preparing for undergraduate and USMLE Step 1 exams.
Book Synopsis The Metabolism Plan by : Lyn-Genet Recitas
Download or read book The Metabolism Plan written by Lyn-Genet Recitas and published by Grand Central Life & Style. This book was released on 2017-01-17 with total page 332 pages. Available in PDF, EPUB and Kindle. Book excerpt: The New York Times bestselling author of The Plan is back to help readers customize their diet and exercise less to lose more weight! The Plan -- the instant New York Times and USA Today bestseller that helped readers pinpoint which "healthy" foods were making them gain weight -- has helped hundreds of thousands of readers slim down. Now nutritionist Lyn-Genet Recitas shares her groundbreaking new 30-day program that helps readers create a customized diet and exercise plan to boost their metabolism and burn more fat. Readers will discover: why exercising less -- as little as 12 minutes, 3 times a week! -- can help them lose more weight; why "healthy" foods like oatmeal and salmon may be packing on the pounds, but French fries may not; and how to optimize their thyroid function. Featuring all-new recipes and backed by science, The Metabolism Plan is primed to revolutionize the diet shelf and help readers shed weight for good.
Book Synopsis Endocrine and Metabolic Disorders by : Robert F. Dons
Download or read book Endocrine and Metabolic Disorders written by Robert F. Dons and published by CRC Press. This book was released on 2009-06-17 with total page 612 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bottom Line Information to Effectively Diagnose DisordersThe diagnosis, management, and clinical testing associated with old, traditional, and new endocrine disorders have seen numerous advances during the past 10 years since the publication of the previous edition of this bestselling resource. Updating its classic predecessor in content and format
Download or read book Metabolomics written by Jeevan Prasain and published by BoD – Books on Demand. This book was released on 2016-12-28 with total page 218 pages. Available in PDF, EPUB and Kindle. Book excerpt: Metabolomics: Fundamentals and Applications authoritatively presents the basic principles and applications of metabolomics. Topics covered in this book range from the analysis of metabolites from different biological sources and their data processing and statistical analysis. This book serves as a basic guide for a wide range of audiences from less familiar with metabolomics techniques to more experienced researchers seeking to understand complex biological systems from the systems biology approach.
Book Synopsis MATLAB for Machine Learning by : Giuseppe Ciaburro
Download or read book MATLAB for Machine Learning written by Giuseppe Ciaburro and published by Packt Publishing Ltd. This book was released on 2017-08-28 with total page 374 pages. Available in PDF, EPUB and Kindle. Book excerpt: Extract patterns and knowledge from your data in easy way using MATLAB About This Book Get your first steps into machine learning with the help of this easy-to-follow guide Learn regression, clustering, classification, predictive analytics, artificial neural networks and more with MATLAB Understand how your data works and identify hidden layers in the data with the power of machine learning. Who This Book Is For This book is for data analysts, data scientists, students, or anyone who is looking to get started with machine learning and want to build efficient data processing and predicting applications. A mathematical and statistical background will really help in following this book well. What You Will Learn Learn the introductory concepts of machine learning. Discover different ways to transform data using SAS XPORT, import and export tools, Explore the different types of regression techniques such as simple & multiple linear regression, ordinary least squares estimation, correlations and how to apply them to your data. Discover the basics of classification methods and how to implement Naive Bayes algorithm and Decision Trees in the Matlab environment. Uncover how to use clustering methods like hierarchical clustering to grouping data using the similarity measures. Know how to perform data fitting, pattern recognition, and clustering analysis with the help of MATLAB Neural Network Toolbox. Learn feature selection and extraction for dimensionality reduction leading to improved performance. In Detail MATLAB is the language of choice for many researchers and mathematics experts for machine learning. This book will help you build a foundation in machine learning using MATLAB for beginners. You'll start by getting your system ready with t he MATLAB environment for machine learning and you'll see how to easily interact with the Matlab workspace. We'll then move on to data cleansing, mining and analyzing various data types in machine learning and you'll see how to display data values on a plot. Next, you'll get to know about the different types of regression techniques and how to apply them to your data using the MATLAB functions. You'll understand the basic concepts of neural networks and perform data fitting, pattern recognition, and clustering analysis. Finally, you'll explore feature selection and extraction techniques for dimensionality reduction for performance improvement. At the end of the book, you will learn to put it all together into real-world cases covering major machine learning algorithms and be comfortable in performing machine learning with MATLAB. Style and approach The book takes a very comprehensive approach to enhance your understanding of machine learning using MATLAB. Sufficient real-world examples and use cases are included in the book to help you grasp the concepts quickly and apply them easily in your day-to-day work.
Book Synopsis Metabolome Analysis by : Silas G. Villas-Boas
Download or read book Metabolome Analysis written by Silas G. Villas-Boas and published by John Wiley & Sons. This book was released on 2007-02-16 with total page 339 pages. Available in PDF, EPUB and Kindle. Book excerpt: Providing information on the main approaches for the analysis of metabolites, this textbook: Covers basic methodologies in sample preparation and separation techniques, as well as the most recent techniques of mass spectrometry. Differentiates between primary and secondary metabolites. Includes four chapters discussing successful metabolome studies of different organisms. Highlights the analytical challenges of studying metabolites. Illustrates applications of metabolome analysis through the use of case studies.
Author :George G. Harrigan Publisher :Springer Science & Business Media ISBN 13 :9781402073700 Total Pages :354 pages Book Rating :4.0/5 (737 download)
Book Synopsis Metabolic Profiling: Its Role in Biomarker Discovery and Gene Function Analysis by : George G. Harrigan
Download or read book Metabolic Profiling: Its Role in Biomarker Discovery and Gene Function Analysis written by George G. Harrigan and published by Springer Science & Business Media. This book was released on 2003-01-31 with total page 354 pages. Available in PDF, EPUB and Kindle. Book excerpt: It is evident that biochemical control is not strictly hierarchical and that intermediary metabolism can contribute to control of regulatory pathways. Metabolic studies are therefore increasingly important in gene function analyses, and an increased interest in metabolites as biomarkers for disease progression or response to therapeutic intervention is also evident in the pharmaceutical industry. This book offers guidelines to currently available technology and bioinformatics and database strategies now being developed. Evidence is presented that metabolic profiling is a valuable addition to genomics and proteomics strategies devoted to drug discovery and development, and that metabolic profiling offers numerous advantages.
Book Synopsis Annual Plant Reviews, Control of Primary Metabolism in Plants by : William Plaxton
Download or read book Annual Plant Reviews, Control of Primary Metabolism in Plants written by William Plaxton and published by John Wiley & Sons. This book was released on 2008-04-15 with total page 408 pages. Available in PDF, EPUB and Kindle. Book excerpt: The ability to control the rates of metabolic processes in response to changes in the internal or external environment is an indispensable attribute of living cells that must have arisen with life’s origin. This adaptability is necessary for conserving the stability of the intracellular environment which is, in turn, essential for maintaining an efficient functional state. The advent of genomics, proteomics, and metabolomics has revolutionised the study of plant development and is now having a significant impact on the study of plant metabolism and its control. In the last few years, significant advances have been made, with the elucidation of enzyme gene families and the identification of new proteinaceous and allosteric regulators. The first part of this volume is devoted to generic aspects of metabolic control, with chapters on the key control points in pathways. Part Two considers the control of specific pathways, with detailed descriptions (including structures) and discussions of the regulation of these pathways, particularly in terms of the enzymology. The book is directed at researchers and professionals in plant biochemistry, physiology, molecular biology and cell biology.
Book Synopsis Sample Preparation in Metabolomics by : Julia Kuligowski
Download or read book Sample Preparation in Metabolomics written by Julia Kuligowski and published by MDPI. This book was released on 2021-04-07 with total page 206 pages. Available in PDF, EPUB and Kindle. Book excerpt: Metabolomics is increasingly being used to explore the dynamic responses of living systems in biochemical research. The complexity of the metabolome is outstanding, requiring the use of complementary analytical platforms and methods for its quantitative or qualitative profiling. In alignment with the selected analytical approach and the study aim, sample collection and preparation are critical steps that must be carefully selected and optimized to generate high-quality metabolomic data. This book showcases some of the most recent developments in the field of sample preparation for metabolomics studies. Novel technologies presented include electromembrane extraction of polar metabolites from plasma samples and guidelines for the preparation of biospecimens for the analysis with high-resolution μ magic-angle spinning nuclear magnetic resonance (HR-μMAS NMR). In the following chapters, the spotlight is on sample preparation approaches that have been optimized for diverse bioanalytical applications, including the analysis of cell lines, bacteria, single spheroids, extracellular vesicles, human milk, plant natural products and forest trees.
Book Synopsis Metabolic Profiling by : Thomas O. Metz
Download or read book Metabolic Profiling written by Thomas O. Metz and published by Humana Press. This book was released on 2011-04-06 with total page 391 pages. Available in PDF, EPUB and Kindle. Book excerpt: At the intersection of metabolite analysis, metabolic fingerprinting, and metabolomics, the study of metabolic profiling has evolved steadily over the course of time as have the methods and technologies involved in its study. In Metabolic Profiling: Methods and Protocols, expert researchers in the field present protocols that are illustrative of the evolution of metabolic profiling from single molecule analysis to global metabolome profiling. Comprised of the most essential techniques, this volume covers topics from inborn errors of metabolism and drug metabolite analysis to nuclear magnetic resonance metabolic profiles. Written in the highly successful Methods in Molecular BiologyTM series format, chapters include introductions to their respective subjects, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Metabolic Profiling: Methods and Protocols serves as a resource for both established and new investigators in this vital and ever-developing field.
Book Synopsis Optimised Analysis and Visualisation of Metabolic Data Using Graph Theoretical Approaches by :
Download or read book Optimised Analysis and Visualisation of Metabolic Data Using Graph Theoretical Approaches written by and published by . This book was released on with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Since the completion of the Human Genome Project in 2003, it has become increasingly apparent that while genomics has a major role to play in the understanding of human biology, information from other disciplines is necessary to explain the web of interacting signals that allow our bodies to function on a day to day basis and respond to rapid changes in our local environment. One such field, that of metabolomics, focuses on the study of the set of low molecular weight compounds (metabolites) involved in metabolism. Metabolomic studies aim to quantify the concentrations of each of these compounds within a subject under particular conditions, resulting in either information on the physiological effects of a disease or environmental factor (such as a toxin) on the organism, or the identification of metabolites or groups of metabolites that serve as biochemical markers for a state or illness. Whilst metabolite concentrations alone can give great insight into a chosen state, additional information can be obtained by considering the ways in which metabolites interact with each other as parts of a larger system. One method of tackling this problem, metabolic networks, is gaining popularity within the community as it offers a complementary approach to the traditional biological method for studying metabolism, the metabolic pathway. Construction methods are varied; ranging from the mapping of experimental data onto pathway diagrams, through the use of correlation-based techniques, to the analysis of time-series data of metabolic fluxes. However, while many attempts have been made to capture and visualise the complex web of reactions within an organism, few have yet succeeded in showing how they can be used to help identify the metabolites that are most significantly involved in the differences between groups of biological samples. This thesis discusses ways in which graphs may be used to aid researchers in both the visualisation and interpretation of metabolomic datasets, an.
