Practical Bioinformatics For Beginners

Download Practical Bioinformatics For Beginners full books in PDF, epub, and Kindle. Read online Practical Bioinformatics For Beginners ebook anywhere anytime directly on your device. Fast Download speed and no annoying ads. We cannot guarantee that every ebooks is available!

Practical Bioinformatics For Beginners: From Raw Sequence Analysis To Machine Learning Applications

Author : Lloyd Wai Yee Low
Publisher : World Scientific
ISBN 13 : 9811259003
Total Pages : 268 pages
Book Rating : 4.8/5 (112 download)

DOWNLOAD NOW!

Book Synopsis Practical Bioinformatics For Beginners: From Raw Sequence Analysis To Machine Learning Applications by : Lloyd Wai Yee Low

Download or read book Practical Bioinformatics For Beginners: From Raw Sequence Analysis To Machine Learning Applications written by Lloyd Wai Yee Low and published by World Scientific. This book was released on 2023-01-17 with total page 268 pages. Available in PDF, EPUB and Kindle. Book excerpt: Next-Generation Sequencing (NGS) is increasingly common and has applications in various fields such as clinical diagnosis, animal and plant breeding, and conservation of species. This incredible tool has become cost-effective. However, it generates a deluge of sequence data that requires efficient analysis. The highly sought-after skills in computational and statistical analyses include machine learning and, are essential for successful research within a wide range of specializations, such as identifying causes of cancer, vaccine design, new antibiotics, drug development, personalized medicine, and increased crop yields in agriculture.This invaluable book provides step-by-step guides to complex topics that make it easy for readers to perform specific analyses, from raw sequenced data to answer important biological questions using machine learning methods. It is an excellent hands-on material for lecturers who conduct courses in bioinformatics and as reference material for professionals. The chapters are standalone recipes making them suitable for readers who wish to self-learn selected topics. Readers gain the essential skills necessary to work on sequenced data from NGS platforms; hence, making themselves more attractive to employers who need skilled bioinformaticians.

Algorithms in Bioinformatics

Author : Wing-Kin Sung
Publisher : CRC Press
ISBN 13 : 1420070347
Total Pages : 408 pages
Book Rating : 4.4/5 (2 download)

DOWNLOAD NOW!

Book Synopsis Algorithms in Bioinformatics by : Wing-Kin Sung

Download or read book Algorithms in Bioinformatics written by Wing-Kin Sung and published by CRC Press. This book was released on 2009-11-24 with total page 408 pages. Available in PDF, EPUB and Kindle. Book excerpt: Thoroughly Describes Biological Applications, Computational Problems, and Various Algorithmic Solutions Developed from the author's own teaching material, Algorithms in Bioinformatics: A Practical Introduction provides an in-depth introduction to the algorithmic techniques applied in bioinformatics. For each topic, the author clearly details the bi

Introduction to Bioinformatics with R

Author : Edward Curry
Publisher : CRC Press
ISBN 13 : 1351015303
Total Pages : 311 pages
Book Rating : 4.3/5 (51 download)

DOWNLOAD NOW!

Book Synopsis Introduction to Bioinformatics with R by : Edward Curry

Download or read book Introduction to Bioinformatics with R written by Edward Curry and published by CRC Press. This book was released on 2020-11-02 with total page 311 pages. Available in PDF, EPUB and Kindle. Book excerpt: In biological research, the amount of data available to researchers has increased so much over recent years, it is becoming increasingly difficult to understand the current state of the art without some experience and understanding of data analytics and bioinformatics. An Introduction to Bioinformatics with R: A Practical Guide for Biologists leads the reader through the basics of computational analysis of data encountered in modern biological research. With no previous experience with statistics or programming required, readers will develop the ability to plan suitable analyses of biological datasets, and to use the R programming environment to perform these analyses. This is achieved through a series of case studies using R to answer research questions using molecular biology datasets. Broadly applicable statistical methods are explained, including linear and rank-based correlation, distance metrics and hierarchical clustering, hypothesis testing using linear regression, proportional hazards regression for survival data, and principal component analysis. These methods are then applied as appropriate throughout the case studies, illustrating how they can be used to answer research questions. Key Features: · Provides a practical course in computational data analysis suitable for students or researchers with no previous exposure to computer programming. · Describes in detail the theoretical basis for statistical analysis techniques used throughout the textbook, from basic principles · Presents walk-throughs of data analysis tasks using R and example datasets. All R commands are presented and explained in order to enable the reader to carry out these tasks themselves. · Uses outputs from a large range of molecular biology platforms including DNA methylation and genotyping microarrays; RNA-seq, genome sequencing, ChIP-seq and bisulphite sequencing; and high-throughput phenotypic screens. · Gives worked-out examples geared towards problems encountered in cancer research, which can also be applied across many areas of molecular biology and medical research. This book has been developed over years of training biological scientists and clinicians to analyse the large datasets available in their cancer research projects. It is appropriate for use as a textbook or as a practical book for biological scientists looking to gain bioinformatics skills.

Practical Bioinformatics

Author : Michael Agostino
Publisher : Garland Science
ISBN 13 : 1134063911
Total Pages : 392 pages
Book Rating : 4.1/5 (34 download)

DOWNLOAD NOW!

Book Synopsis Practical Bioinformatics by : Michael Agostino

Download or read book Practical Bioinformatics written by Michael Agostino and published by Garland Science. This book was released on 2012-09-26 with total page 392 pages. Available in PDF, EPUB and Kindle. Book excerpt: Practical Bioinformatics is specifically designed for biology majors, with a heavy emphasis on the steps required to perform bioinformatics analysis to answer biological questions. It is written for courses that have a practical, hands-on element and contains many exercises (for example, database searches, protein analysis, data interpretation) to

Bioinformatics

Author : Shui Qing Ye
Publisher : CRC Press
ISBN 13 : 1584888113
Total Pages : 646 pages
Book Rating : 4.5/5 (848 download)

DOWNLOAD NOW!

Book Synopsis Bioinformatics by : Shui Qing Ye

Download or read book Bioinformatics written by Shui Qing Ye and published by CRC Press. This book was released on 2007-08-20 with total page 646 pages. Available in PDF, EPUB and Kindle. Book excerpt: An emerging, ever-evolving branch of science, bioinformatics has paved the way for the explosive growth in the distribution of biological information to a variety of biological databases, including the National Center for Biotechnology Information. For growth to continue in this field, biologists must obtain basic computer skills while computer spe

Bioinformatics

Author : Andreas D. Baxevanis
Publisher : John Wiley & Sons
ISBN 13 : 0471461016
Total Pages : 504 pages
Book Rating : 4.4/5 (714 download)

DOWNLOAD NOW!

Book Synopsis Bioinformatics by : Andreas D. Baxevanis

Download or read book Bioinformatics written by Andreas D. Baxevanis and published by John Wiley & Sons. This book was released on 2004-03-24 with total page 504 pages. Available in PDF, EPUB and Kindle. Book excerpt: "In this book, Andy Baxevanis and Francis Ouellette . . . haveundertaken the difficult task of organizing the knowledge in thisfield in a logical progression and presenting it in a digestibleform. And they have done an excellent job. This fine text will makea major impact on biological research and, in turn, on progress inbiomedicine. We are all in their debt." —Eric Lander from the Foreword Reviews from the First Edition "...provides a broad overview of the basic tools for sequenceanalysis ... For biologists approaching this subject for the firsttime, it will be a very useful handbook to keep on the shelf afterthe first reading, close to the computer." —Nature Structural Biology "...should be in the personal library of any biologist who usesthe Internet for the analysis of DNA and protein sequencedata." —Science "...a wonderful primer designed to navigate the novice throughthe intricacies of in scripto analysis ... The accomplished genesearcher will also find this book a useful addition to theirlibrary ... an excellent reference to the principles ofbioinformatics." —Trends in Biochemical Sciences This new edition of the highly successful Bioinformatics:A Practical Guide to the Analysis of Genes and Proteinsprovides a sound foundation of basic concepts, with practicaldiscussions and comparisons of both computational tools anddatabases relevant to biological research. Equipping biologists with the modern tools necessary to solvepractical problems in sequence data analysis, the Second Editioncovers the broad spectrum of topics in bioinformatics, ranging fromInternet concepts to predictive algorithms used on sequence,structure, and expression data. With chapters written by experts inthe field, this up-to-date reference thoroughly covers vitalconcepts and is appropriate for both the novice and the experiencedpractitioner. Written in clear, simple language, the book isaccessible to users without an advanced mathematical or computerscience background. This new edition includes: All new end-of-chapter Web resources, bibliographies, andproblem sets Accompanying Web site containing the answers to the problems,as well as links to relevant Web resources New coverage of comparative genomics, large-scale genomeanalysis, sequence assembly, and expressed sequence tags A glossary of commonly used terms in bioinformatics andgenomics Bioinformatics: A Practical Guide to the Analysis of Genesand Proteins, Second Edition is essential reading forresearchers, instructors, and students of all levels in molecularbiology and bioinformatics, as well as for investigators involvedin genomics, positional cloning, clinical research, andcomputational biology.

Practical Bioinformatics

Author : Janusz M. Bujnicki
Publisher : Springer
ISBN 13 : 3540742689
Total Pages : 275 pages
Book Rating : 4.5/5 (47 download)

DOWNLOAD NOW!

Book Synopsis Practical Bioinformatics by : Janusz M. Bujnicki

Download or read book Practical Bioinformatics written by Janusz M. Bujnicki and published by Springer. This book was released on 2007-09-12 with total page 275 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents applications of bioinformatics tools that experimental research scientists use in "daily practice." Its interdisciplinary approach combines computational and experimental methods to solve scientific problems. The book begins with reviews of computational methods for protein sequence-structure-function analysis, followed by methods that use experimental data obtained in the laboratory to improve functional predictions.

Bioinformatics for Beginners

Author : Supratim Choudhuri
Publisher : Elsevier
ISBN 13 : 0124105106
Total Pages : 238 pages
Book Rating : 4.1/5 (241 download)

DOWNLOAD NOW!

Book Synopsis Bioinformatics for Beginners by : Supratim Choudhuri

Download or read book Bioinformatics for Beginners written by Supratim Choudhuri and published by Elsevier. This book was released on 2014-05-09 with total page 238 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bioinformatics for Beginners: Genes, Genomes, Molecular Evolution, Databases and Analytical Tools provides a coherent and friendly treatment of bioinformatics for any student or scientist within biology who has not routinely performed bioinformatic analysis. The book discusses the relevant principles needed to understand the theoretical underpinnings of bioinformatic analysis and demonstrates, with examples, targeted analysis using freely available web-based software and publicly available databases. Eschewing non-essential information, the work focuses on principles and hands-on analysis, also pointing to further study options. Avoids non-essential coverage, yet fully describes the field for beginners Explains the molecular basis of evolution to place bioinformatic analysis in biological context Provides useful links to the vast resource of publicly available bioinformatic databases and analysis tools Contains over 100 figures that aid in concept discovery and illustration

Bioinformatics

Author : Hamid D. Ismail
Publisher : CRC Press
ISBN 13 : 1000519074
Total Pages : 466 pages
Book Rating : 4.0/5 (5 download)

DOWNLOAD NOW!

Book Synopsis Bioinformatics by : Hamid D. Ismail

Download or read book Bioinformatics written by Hamid D. Ismail and published by CRC Press. This book was released on 2022-03-23 with total page 466 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bioinformatics: A Practical Guide to NCBI Databases and Sequence Alignments provides the basics of bioinformatics and in-depth coverage of NCBI databases, sequence alignment, and NCBI Sequence Local Alignment Search Tool (BLAST). As bioinformatics has become essential for life sciences, the book has been written specifically to address the need of a large audience including undergraduates, graduates, researchers, healthcare professionals, and bioinformatics professors who need to use the NCBI databases, retrieve data from them, and use BLAST to find evolutionarily related sequences, sequence annotation, construction of phylogenetic tree, and the conservative domain of a protein, to name just a few. Technical details of alignment algorithms are explained with a minimum use of mathematical formulas and with graphical illustrations. Key Features Provides readers with the most-used bioinformatics knowledge of bioinformatics databases and alignments including both theory and application via illustrations and worked examples. Discusses the use of Windows Command Prompt, Linux shell, R, and Python for both Entrez databases and BLAST. The companion website contains tutorials, R and Python codes, instructor materials including slides, exercises, and problems for students. This is the ideal textbook for bioinformatics courses taken by students of life sciences and for researchers wishing to develop their knowledge of bioinformatics to facilitate their own research.

Bioinformatics Programming in Python

Author : Ruediger-Marcus Flaig
Publisher : John Wiley & Sons
ISBN 13 : 3527644903
Total Pages : 432 pages
Book Rating : 4.5/5 (276 download)

DOWNLOAD NOW!

Book Synopsis Bioinformatics Programming in Python by : Ruediger-Marcus Flaig

Download or read book Bioinformatics Programming in Python written by Ruediger-Marcus Flaig and published by John Wiley & Sons. This book was released on 2011-10-05 with total page 432 pages. Available in PDF, EPUB and Kindle. Book excerpt: This first introductory book designed to train novice programmers is based on a student course taught by the author, and has been optimized for biology students without previous experience in programming. By interspersing theory chapters with numerous small and large programming exercises, the author quickly shows readers how to do their own programming, and throughout uses anecdotes and real-life examples from the biosciences to 'spice up' the text. This practical book thus teaches essential programming skills for life scientists who want -- or need -- to write their own bioinformatics software tools.

RNA-seq Data Analysis

Author : Eija Korpelainen
Publisher : CRC Press
ISBN 13 : 1466595019
Total Pages : 322 pages
Book Rating : 4.4/5 (665 download)

DOWNLOAD NOW!

Book Synopsis RNA-seq Data Analysis by : Eija Korpelainen

Download or read book RNA-seq Data Analysis written by Eija Korpelainen and published by CRC Press. This book was released on 2014-09-19 with total page 322 pages. Available in PDF, EPUB and Kindle. Book excerpt: The State of the Art in Transcriptome AnalysisRNA sequencing (RNA-seq) data offers unprecedented information about the transcriptome, but harnessing this information with bioinformatics tools is typically a bottleneck. RNA-seq Data Analysis: A Practical Approach enables researchers to examine differential expression at gene, exon, and transcript le

Bioinformatics For Dummies

Author : Jean-Michel Claverie
Publisher : John Wiley & Sons
ISBN 13 : 1118051106
Total Pages : 475 pages
Book Rating : 4.1/5 (18 download)

DOWNLOAD NOW!

Book Synopsis Bioinformatics For Dummies by : Jean-Michel Claverie

Download or read book Bioinformatics For Dummies written by Jean-Michel Claverie and published by John Wiley & Sons. This book was released on 2011-02-10 with total page 475 pages. Available in PDF, EPUB and Kindle. Book excerpt: Were you always curious about biology but were afraid to sit through long hours of dense reading? Did you like the subject when you were in high school but had other plans after you graduated? Now you can explore the human genome and analyze DNA without ever leaving your desktop! Bioinformatics For Dummies is packed with valuable information that introduces you to this exciting new discipline. This easy-to-follow guide leads you step by step through every bioinformatics task that can be done over the Internet. Forget long equations, computer-geek gibberish, and installing bulky programs that slow down your computer. You’ll be amazed at all the things you can accomplish just by logging on and following these trusty directions. You get the tools you need to: Analyze all types of sequences Use all types of databases Work with DNA and protein sequences Conduct similarity searches Build a multiple sequence alignment Edit and publish alignments Visualize protein 3-D structures Construct phylogenetic trees This up-to-date second edition includes newly created and popular databases and Internet programs as well as multiple new genomes. It provides tips for using servers and places to seek resources to find out about what’s going on in the bioinformatics world. Bioinformatics For Dummies will show you how to get the most out of your PC and the right Web tools so you'll be searching databases and analyzing sequences like a pro!

EMBOSS User's Guide

Author : Peter M. Rice
Publisher : Cambridge University Press
ISBN 13 : 9780521607254
Total Pages : 394 pages
Book Rating : 4.6/5 (72 download)

DOWNLOAD NOW!

Book Synopsis EMBOSS User's Guide by : Peter M. Rice

Download or read book EMBOSS User's Guide written by Peter M. Rice and published by Cambridge University Press. This book was released on 2011-06-16 with total page 394 pages. Available in PDF, EPUB and Kindle. Book excerpt: The European Molecular Biology Open Source Software Suite (EMBOSS) is the premier Open Source package of tools for molecular biology analysis and bioinformatics. Practical Bioinformatics with EMBOSS is the official and definitive guide to the package. It includes comprehensive information and practical instructions, including an in-depth tutorial and guidelines on common ways to use the package. It is written specifically for biologists, bioinformaticians and other end-users, and no prior experience with EMBOSS is assumed.

Beginning Perl for Bioinformatics

Author : James Tisdall
Publisher : "O'Reilly Media, Inc."
ISBN 13 : 0596550472
Total Pages : 388 pages
Book Rating : 4.5/5 (965 download)

DOWNLOAD NOW!

Book Synopsis Beginning Perl for Bioinformatics by : James Tisdall

Download or read book Beginning Perl for Bioinformatics written by James Tisdall and published by "O'Reilly Media, Inc.". This book was released on 2001-10-22 with total page 388 pages. Available in PDF, EPUB and Kindle. Book excerpt: With its highly developed capacity to detect patterns in data, Perl has become one of the most popular languages for biological data analysis. But if you're a biologist with little or no programming experience, starting out in Perl can be a challenge. Many biologists have a difficult time learning how to apply the language to bioinformatics. The most popular Perl programming books are often too theoretical and too focused on computer science for a non-programming biologist who needs to solve very specific problems.Beginning Perl for Bioinformatics is designed to get you quickly over the Perl language barrier by approaching programming as an important new laboratory skill, revealing Perl programs and techniques that are immediately useful in the lab. Each chapter focuses on solving a particular bioinformatics problem or class of problems, starting with the simplest and increasing in complexity as the book progresses. Each chapter includes programming exercises and teaches bioinformatics by showing and modifying programs that deal with various kinds of practical biological problems. By the end of the book you'll have a solid understanding of Perl basics, a collection of programs for such tasks as parsing BLAST and GenBank, and the skills to take on more advanced bioinformatics programming. Some of the later chapters focus in greater detail on specific bioinformatics topics. This book is suitable for use as a classroom textbook, for self-study, and as a reference.The book covers: Programming basics and working with DNA sequences and strings Debugging your code Simulating gene mutations using random number generators Regular expressions and finding motifs in data Arrays, hashes, and relational databases Regular expressions and restriction maps Using Perl to parse PDB records, annotations in GenBank, and BLAST output

Bioinformatics Programming Using Python

Author : Mitchell L Model
Publisher : "O'Reilly Media, Inc."
ISBN 13 : 1449382908
Total Pages : 526 pages
Book Rating : 4.4/5 (493 download)

DOWNLOAD NOW!

Book Synopsis Bioinformatics Programming Using Python by : Mitchell L Model

Download or read book Bioinformatics Programming Using Python written by Mitchell L Model and published by "O'Reilly Media, Inc.". This book was released on 2009-12-08 with total page 526 pages. Available in PDF, EPUB and Kindle. Book excerpt: Powerful, flexible, and easy to use, Python is an ideal language for building software tools and applications for life science research and development. This unique book shows you how to program with Python, using code examples taken directly from bioinformatics. In a short time, you'll be using sophisticated techniques and Python modules that are particularly effective for bioinformatics programming. Bioinformatics Programming Using Python is perfect for anyone involved with bioinformatics -- researchers, support staff, students, and software developers interested in writing bioinformatics applications. You'll find it useful whether you already use Python, write code in another language, or have no programming experience at all. It's an excellent self-instruction tool, as well as a handy reference when facing the challenges of real-life programming tasks. Become familiar with Python's fundamentals, including ways to develop simple applications Learn how to use Python modules for pattern matching, structured text processing, online data retrieval, and database access Discover generalized patterns that cover a large proportion of how Python code is used in bioinformatics Learn how to apply the principles and techniques of object-oriented programming Benefit from the "tips and traps" section in each chapter

Practical Bioinformatics for Beginners

Author : Lloyd Wai Yee Low
Publisher :
ISBN 13 : 9789811258992
Total Pages : 0 pages
Book Rating : 4.2/5 (589 download)

DOWNLOAD NOW!

Book Synopsis Practical Bioinformatics for Beginners by : Lloyd Wai Yee Low

Download or read book Practical Bioinformatics for Beginners written by Lloyd Wai Yee Low and published by . This book was released on 2022 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Bioinformatics Data Skills

Author : Vince Buffalo
Publisher : "O'Reilly Media, Inc."
ISBN 13 : 1449367518
Total Pages : 538 pages
Book Rating : 4.4/5 (493 download)

DOWNLOAD NOW!

Book Synopsis Bioinformatics Data Skills by : Vince Buffalo

Download or read book Bioinformatics Data Skills written by Vince Buffalo and published by "O'Reilly Media, Inc.". This book was released on 2015-07 with total page 538 pages. Available in PDF, EPUB and Kindle. Book excerpt: Learn the data skills necessary for turning large sequencing datasets into reproducible and robust biological findings. With this practical guide, youâ??ll learn how to use freely available open source tools to extract meaning from large complex biological data sets. At no other point in human history has our ability to understand lifeâ??s complexities been so dependent on our skills to work with and analyze data. This intermediate-level book teaches the general computational and data skills you need to analyze biological data. If you have experience with a scripting language like Python, youâ??re ready to get started. Go from handling small problems with messy scripts to tackling large problems with clever methods and tools Process bioinformatics data with powerful Unix pipelines and data tools Learn how to use exploratory data analysis techniques in the R language Use efficient methods to work with genomic range data and range operations Work with common genomics data file formats like FASTA, FASTQ, SAM, and BAM Manage your bioinformatics project with the Git version control system Tackle tedious data processing tasks with with Bash scripts and Makefiles