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Modeling Bacterial Dynamics In Chemostats
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Book Synopsis The Theory of the Chemostat by : Hal L. Smith
Download or read book The Theory of the Chemostat written by Hal L. Smith and published by Cambridge University Press. This book was released on 1995-01-27 with total page 334 pages. Available in PDF, EPUB and Kindle. Book excerpt: Basic modelling, analysis and simulation of systems that have proven effective in real ecological applications.
Book Synopsis Dynamics of the Chemostat by : Abdelhamid Ajbar
Download or read book Dynamics of the Chemostat written by Abdelhamid Ajbar and published by CRC Press. This book was released on 2011-08-09 with total page 370 pages. Available in PDF, EPUB and Kindle. Book excerpt: A ubiquitous tool in mathematical biology and chemical engineering, the chemostat often produces instabilities that pose safety hazards and adversely affect the optimization of bioreactive systems. Singularity theory and bifurcation diagrams together offer a useful framework for addressing these issues. Based on the authors’ extensive work in this field, Dynamics of the Chemostat: A Bifurcation Theory Approach explores the use of bifurcation theory to analyze the static and dynamic behavior of the chemostat. Introduction The authors first survey the major work that has been carried out on the stability of continuous bioreactors. They next present the modeling approaches used for bioreactive systems, the different kinetic expressions for growth rates, and tools, such as multiplicity, bifurcation, and singularity theory, for analyzing nonlinear systems. Application The text moves on to the static and dynamic behavior of the basic unstructured model of the chemostat for constant and variable yield coefficients as well as in the presence of wall attachment. It then covers the dynamics of interacting species, including pure and simple microbial competition, biodegradation of mixed substrates, dynamics of plasmid-bearing and plasmid-free recombinant cultures, and dynamics of predator–prey interactions. The authors also examine dynamics of the chemostat with product formation for various growth models, provide examples of bifurcation theory for studying the operability and dynamics of continuous bioreactor models, and apply elementary concepts of bifurcation theory to analyze the dynamics of a periodically forced bioreactor. Using singularity theory and bifurcation techniques, this book presents a cohesive mathematical framework for analyzing and modeling the macro- and microscopic interactions occurring in chemostats. The text includes models that describe the intracellular and operating elements of the bioreactive system. It also explains the mathematical theory behind the models.
Download or read book The Chemostat written by Jérôme Harmand and published by John Wiley & Sons. This book was released on 2017-07-19 with total page 246 pages. Available in PDF, EPUB and Kindle. Book excerpt: Invented by J. Monod, and independently by A. Novick and L. Szilard, in 1950, the chemostat is both a micro-organism culturing device and an abstracted ecosystem managed by a controlled nutrient flow. This book studies mathematical models of single species growth as well as competition models of multiple species by integrating recent work in theoretical ecology and population dynamics. Through a modeling approach, the hypotheses and conclusions drawn from the main mathematical results are analyzed and interpreted from a critical perspective. A large emphasis is placed on numerical simulations of which prudent use is advocated. The Chemostat is aimed at readers possessing degree-level mathematical knowledge and includes a detailed appendix of differential equations relating to specific notions and results used throughout this book.
Book Synopsis Adaptive Diversification by : Michael Doebeli
Download or read book Adaptive Diversification written by Michael Doebeli and published by Princeton University Press. This book was released on 2011-08-01 with total page 346 pages. Available in PDF, EPUB and Kindle. Book excerpt: Understanding the mechanisms driving biological diversity remains a central problem in ecology and evolutionary biology. Traditional explanations assume that differences in selection pressures lead to different adaptations in geographically separated locations. This book takes a different approach and explores adaptive diversification--diversification rooted in ecological interactions and frequency-dependent selection. In any ecosystem, birth and death rates of individuals are affected by interactions with other individuals. What is an advantageous phenotype therefore depends on the phenotype of other individuals, and it may often be best to be ecologically different from the majority phenotype. Such rare-type advantage is a hallmark of frequency-dependent selection and opens the scope for processes of diversification that require ecological contact rather than geographical isolation. Michael Doebeli investigates adaptive diversification using the mathematical framework of adaptive dynamics. Evolutionary branching is a paradigmatic feature of adaptive dynamics that serves as a basic metaphor for adaptive diversification, and Doebeli explores the scope of evolutionary branching in many different ecological scenarios, including models of coevolution, cooperation, and cultural evolution. He also uses alternative modeling approaches. Stochastic, individual-based models are particularly useful for studying adaptive speciation in sexual populations, and partial differential equation models confirm the pervasiveness of adaptive diversification. Showing that frequency-dependent interactions are an important driver of biological diversity, Adaptive Diversification provides a comprehensive theoretical treatment of adaptive diversification.
Book Synopsis The Impact of Food Bioactives on Health by : Kitty Verhoeckx
Download or read book The Impact of Food Bioactives on Health written by Kitty Verhoeckx and published by Springer. This book was released on 2015-04-29 with total page 341 pages. Available in PDF, EPUB and Kindle. Book excerpt: “Infogest” (Improving Health Properties of Food by Sharing our Knowledge on the Digestive Process) is an EU COST action/network in the domain of Food and Agriculture that will last for 4 years from April 4, 2011. Infogest aims at building an open international network of institutes undertaking multidisciplinary basic research on food digestion gathering scientists from different origins (food scientists, gut physiologists, nutritionists...). The network gathers 70 partners from academia, corresponding to a total of 29 countries. The three main scientific goals are: Identify the beneficial food components released in the gut during digestion; Support the effect of beneficial food components on human health; Promote harmonization of currently used digestion models Infogest meetings highlighted the need for a publication that would provide researchers with an insight into the advantages and disadvantages associated with the use of respective in vitro and ex vivo assays to evaluate the effects of foods and food bioactives on health. Such assays are particularly important in situations where a large number of foods/bioactives need to be screened rapidly and in a cost effective manner in order to ultimately identify lead foods/bioactives that can be the subject of in vivo assays. The book is an asset to researchers wishing to study the health benefits of their foods and food bioactives of interest and highlights which in vitro/ex vivo assays are of greatest relevance to their goals, what sort of outputs/data can be generated and, as noted above, highlight the strengths and weaknesses of the various assays. It is also an important resource for undergraduate students in the ‘food and health’ arena.
Book Synopsis Polymicrobial Diseases by : Kim A. Brogden
Download or read book Polymicrobial Diseases written by Kim A. Brogden and published by . This book was released on 2002 with total page 460 pages. Available in PDF, EPUB and Kindle. Book excerpt: Polymicrobial diseases, those involving more than one etiologic agent, are more common than is generally realized and include respiratory diseases, gastroenteritis, conjunctivitis, keratitis, hepatitis, periodontal diseases, multiple sclerosis, genital infections, intra -- abdominal infections, and pertussis.
Book Synopsis Reactive Transport Modeling by : Yitian Xiao
Download or read book Reactive Transport Modeling written by Yitian Xiao and published by John Wiley & Sons. This book was released on 2018-03-14 with total page 689 pages. Available in PDF, EPUB and Kindle. Book excerpt: Teaches the application of Reactive Transport Modeling (RTM) for subsurface systems in order to expedite the understanding of the behavior of complex geological systems This book lays out the basic principles and approaches of Reactive Transport Modeling (RTM) for surface and subsurface environments, presenting specific workflows and applications. The techniques discussed are being increasingly commonly used in a wide range of research fields, and the information provided covers fundamental theory, practical issues in running reactive transport models, and how to apply techniques in specific areas. The need for RTM in engineered facilities, such as nuclear waste repositories or CO2 storage sites, is ever increasing, because the prediction of the future evolution of these systems has become a legal obligation. With increasing recognition of the power of these approaches, and their widening adoption, comes responsibility to ensure appropriate application of available tools. This book aims to provide the requisite understanding of key aspects of RTM, and in doing so help identify and thus avoid potential pitfalls. Reactive Transport Modeling covers: the application of RTM for CO2 sequestration and geothermal energy development; reservoir quality prediction; modeling diagenesis; modeling geochemical processes in oil & gas production; modeling gas hydrate production; reactive transport in fractured and porous media; reactive transport studies for nuclear waste disposal; reactive flow modeling in hydrothermal systems; and modeling biogeochemical processes. Key features include: A comprehensive reference for scientists and practitioners entering the area of reactive transport modeling (RTM) Presented by internationally known experts in the field Covers fundamental theory, practical issues in running reactive transport models, and hands-on examples for applying techniques in specific areas Teaches readers to appreciate the power of RTM and to stimulate usage and application Reactive Transport Modeling is written for graduate students and researchers in academia, government laboratories, and industry who are interested in applying reactive transport modeling to the topic of their research. The book will also appeal to geochemists, hydrogeologists, geophysicists, earth scientists, environmental engineers, and environmental chemists.
Book Synopsis Bioreactor Modeling by : Jerome Morchain
Download or read book Bioreactor Modeling written by Jerome Morchain and published by Elsevier. This book was released on 2017-10-06 with total page 220 pages. Available in PDF, EPUB and Kindle. Book excerpt: Dynamic simulation of bioreactors is a challenge for both the industrial and academic worlds. Beyond the large number of physical and biological phenomena to be considered and the wide range of scales involved, the central difficulty lies in the need to account for the dynamic behavior of suspended microorganisms. In the case of chemical reactors, knowledge of the thermodynamic equilibrium laws at the interfaces makes it possible to produce macroscopic models by integrating local laws. Microorganisms, on the other hand, have the ability to modulate the rate of substrate assimilation. Moreover, the nature of the biochemical transformations results from a compromise between the needs of the cell and the available resources. This book revisits the modeling of bioreactors using a multi-scale approach. It addresses issues related to mixing, phase-to-phase transfers and the adaptation of microorganisms to variations in concentration, and explores the use of population balances for the simulation of bioreactors. By adopting a multidisciplinary perspective that draws on process engineering, fluid mechanics and microbiology, this book sheds new light on the particularity of bioprocesses in relation to physical and chemical phenomena. - Presents a multiphase description of bioreactor modeling - Includes a combination of concepts issued from different scientific fields to address a practical issue - Provides a detailed description of the population balance concept as applied to biological systems - Covers a set of illustrative examples of the interaction between hydrodynamics and biological response
Book Synopsis Biochemical Engineering and Biotechnology by : Ghasem Najafpour
Download or read book Biochemical Engineering and Biotechnology written by Ghasem Najafpour and published by Elsevier. This book was released on 2015-02-24 with total page 669 pages. Available in PDF, EPUB and Kindle. Book excerpt: Biochemical Engineering and Biotechnology, 2nd Edition, outlines the principles of biochemical processes and explains their use in the manufacturing of every day products. The author uses a diirect approach that should be very useful for students in following the concepts and practical applications. This book is unique in having many solved problems, case studies, examples and demonstrations of detailed experiments, with simple design equations and required calculations. - Covers major concepts of biochemical engineering and biotechnology, including applications in bioprocesses, fermentation technologies, enzymatic processes, and membrane separations, amongst others - Accessible to chemical engineering students who need to both learn, and apply, biological knowledge in engineering principals - Includes solved problems, examples, and demonstrations of detailed experiments with simple design equations and all required calculations - Offers many graphs that present actual experimental data, figures, and tables, along with explanations
Book Synopsis Elements of Chemical Reaction Engineering by : H. Scott Fogler
Download or read book Elements of Chemical Reaction Engineering written by H. Scott Fogler and published by Pearson Educación. This book was released on 1999 with total page 1006 pages. Available in PDF, EPUB and Kindle. Book excerpt: "The fourth edition of Elements of Chemical Reaction Engineering is a completely revised version of the book. It combines authoritative coverage of the principles of chemical reaction engineering with an unsurpassed focus on critical thinking and creative problem solving, employing open-ended questions and stressing the Socratic method. Clear and organized, it integrates text, visuals, and computer simulations to help readers solve even the most challenging problems through reasoning, rather than by memorizing equations."--BOOK JACKET.
Book Synopsis Microbial Biofilms by : Hilary M. Lappin-Scott
Download or read book Microbial Biofilms written by Hilary M. Lappin-Scott and published by Cambridge University Press. This book was released on 2003-09-18 with total page 332 pages. Available in PDF, EPUB and Kindle. Book excerpt: Biochemistry and ecology of biofilms from industrial, medical and other viewpoints.
Book Synopsis Plankton Regulation Dynamics by : Norbert Walz
Download or read book Plankton Regulation Dynamics written by Norbert Walz and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 310 pages. Available in PDF, EPUB and Kindle. Book excerpt: Continuous cultures, i.e. chemostats with an continuous dilution rate, are model ecosystems for the study of general regulation principles in plankton communities. Further to an introduction, general continuous culture methods and especially the characteristics of rotifer continuousculture systems are presented. Sections on metabolism and energetics in chemostats, growth models, competition and predator-prey interactions, as well as the application of rotifer continuous cultures to ecotoxicology and their use in aquaculture are included.
Book Synopsis Partial Differential Equations in Ecology by : Sergei Petrovski
Download or read book Partial Differential Equations in Ecology written by Sergei Petrovski and published by MDPI. This book was released on 2021-03-17 with total page 238 pages. Available in PDF, EPUB and Kindle. Book excerpt: Partial differential equations (PDEs) have been used in theoretical ecology research for more than eighty years. Nowadays, along with a variety of different mathematical techniques, they remain as an efficient, widely used modelling framework; as a matter of fact, the range of PDE applications has even become broader. This volume presents a collection of case studies where applications range from bacterial systems to population dynamics of human riots.
Book Synopsis Dynamics of the Chemostat by : Abdelhamid Ajbar
Download or read book Dynamics of the Chemostat written by Abdelhamid Ajbar and published by CRC Press. This book was released on 2011-08-09 with total page 366 pages. Available in PDF, EPUB and Kindle. Book excerpt: A ubiquitous tool in mathematical biology and chemical engineering, the chemostat often produces instabilities that pose safety hazards and adversely affect the optimization of bioreactive systems. Singularity theory and bifurcation diagrams together offer a useful framework for addressing these issues. Based on the authors' extensive work in this
Book Synopsis Bioprocess Engineering by : Shijie Liu
Download or read book Bioprocess Engineering written by Shijie Liu and published by Newnes. This book was released on 2012-11-21 with total page 1001 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bioprocess Engineering involves the design and development of equipment and processes for the manufacturing of products such as food, feed, pharmaceuticals, nutraceuticals, chemicals, and polymers and paper from biological materials. It also deals with studying various biotechnological processes. "Bioprocess Kinetics and Systems Engineering" first of its kind contains systematic and comprehensive content on bioprocess kinetics, bioprocess systems, sustainability and reaction engineering. Dr. Shijie Liu reviews the relevant fundamentals of chemical kinetics-including batch and continuous reactors, biochemistry, microbiology, molecular biology, reaction engineering, and bioprocess systems engineering- introducing key principles that enable bioprocess engineers to engage in the analysis, optimization, design and consistent control over biological and chemical transformations. The quantitative treatment of bioprocesses is the central theme of this book, while more advanced techniques and applications are covered with some depth. Many theoretical derivations and simplifications are used to demonstrate how empirical kinetic models are applicable to complicated bioprocess systems. - Contains extensive illustrative drawings which make the understanding of the subject easy - Contains worked examples of the various process parameters, their significance and their specific practical use - Provides the theory of bioprocess kinetics from simple concepts to complex metabolic pathways - Incorporates sustainability concepts into the various bioprocesses
Book Synopsis Dynamical Modelling & Estimation in Wastewater Treatment Processes by : D. Dochain
Download or read book Dynamical Modelling & Estimation in Wastewater Treatment Processes written by D. Dochain and published by IWA Publishing. This book was released on 2001-12-01 with total page 360 pages. Available in PDF, EPUB and Kindle. Book excerpt: Environmental quality is becoming an increasing concern in our society. In that context, waste and wastewater treatment, and more specifically biological wastewater treatment processes play an important role. In this book, we concentrate on the mathematical modelling of these processes. The main purpose is to provide the increasing number of professionals who are using models to design, optimise and control wastewater treatment processes with the necessary background for their activities of model building, selection and calibration. The book deals specifically with dynamic models because they allow us to describe the behaviour of treatment plants under the highly dynamic conditions that we want them to operate (e.g. Sequencing Batch Reactors) or we have to operate them (e.g. storm conditions, spills). Further extension is provided to new reactor systems for which partial differential equation descriptions are necessary to account for their distributed parameter nature (e.g. settlers, fixed bed reactors). The model building exercise is introduced as a step-wise activity that, in this book, starts from mass balancing principles. In many cases, different hypotheses and their corresponding models can be proposed for a particular process. It is therefore essential to be able to select from these candidate models in an objective manner. To this end, structure characterisation methods are introduced. Important sections of the book deal with the collection of high quality data using optimal experimental design, parameter estimation techniques for calibration and the on-line use of models in state and parameter estimators. Contents Dynamical Modelling Dynamical Mass Balance Model Building and Analysis Structure Characterisation (SC) Structural Identifiability Practical Identifiability and Optimal Experiment Design for Parameter Estimation (OED/PE) Estimation of Model Parameters Recursive State and Parameter Estimation Glossary Nomenclature
Book Synopsis Bioreaction Engineering Principles by : Jens Nielsen
Download or read book Bioreaction Engineering Principles written by Jens Nielsen and published by Springer. This book was released on 2012-12-06 with total page 537 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is the second edition of the text "Bioreaction Engineering Principles" by Jens Nielsen and John Villadsen, originally published in 1994 by Plenum Press (now part of Kluwer). Time runs fast in Biotechnology, and when Kluwer Plenum stopped reprinting the first edition and asked us to make a second, revised edition we happily accepted. A text on bioreactions written in the early 1990's will not reflect the enormous development of experimental as well as theoretical aspects of cellular reactions during the past decade. In the preface to the first edition we admitted to be newcomers in the field. One of us (JV) has had 10 more years of job training in biotechnology, and the younger author (IN) has now received international recognition for his work with the hottest topics of "modem" biotechnology. Furthermore we are happy to have induced Gunnar Liden, professor of chemical reaction engineering at our sister university in Lund, Sweden to join us as co-author of the second edition. His contribution, especially on the chemical engineering aspects of "real" bioreactors has been of the greatest value. Chapter 8 of the present edition is largely unchanged from the first edition. We wish to thank professor Martin Hjortso from LSU for his substantial help with this chapter.
