Local Search Based Protein Folding Simulations

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Bioinformatics Research and Development

Author : Mourad Elloumi
Publisher : Springer Science & Business Media
ISBN 13 : 3540706003
Total Pages : 613 pages
Book Rating : 4.5/5 (47 download)

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Book Synopsis Bioinformatics Research and Development by : Mourad Elloumi

Download or read book Bioinformatics Research and Development written by Mourad Elloumi and published by Springer Science & Business Media. This book was released on 2008-08-31 with total page 613 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume contains the papers which were selected for presentation at the second Bio- formatics Research and Development (BIRD) conference held in Vienna, Austria during July 7–9, 2008. BIRD covers a wide range of topics related to bioinformatics. This year sequence analysis and alignment, pathways, networks, systems biology, protein and RNA structure and function, gene expression/regulation and microarrays, databases and data integration, machine learning and data analysis were the subjects of main interest. The decisions of the Program Committee are based on the recommendations of at least three, up to five, reviews for each paper. As a result, 30 of the 61 submitted c- tributions could be accepted for the conference. We were happy to have three invited talks presented by experienced researchers providing visitors with a good overview but also some very important insights into the fascinating domain of bioinformatics. Abstracts and more information on these talks are provided in the conference program as well as at the conference site. In the second part of this volume the selected contributions of the two workshops which were held in parallel to the main conference are presented: Workshop on - namical Aspects of Perturbation, Intervention and Transition in Biological Systems – PETRIN 2008 and Workshop on Algorithms in Molecular Biology – ALBIO 2008 Poster presentations of the BIRD conference are in the companion proceedings published by the Trauner Verlag, Linz.

Bioinformatics Research and Development

Author : Sepp Hochreiter
Publisher : Springer
ISBN 13 : 354071233X
Total Pages : 497 pages
Book Rating : 4.5/5 (47 download)

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Book Synopsis Bioinformatics Research and Development by : Sepp Hochreiter

Download or read book Bioinformatics Research and Development written by Sepp Hochreiter and published by Springer. This book was released on 2007-05-21 with total page 497 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the First International Bioinformatics Research and Development Conference, BIRD 2007, held in Berlin, Germany in March 2007. The 36 revised full papers are organized in topical sections on microarray and systems biology and networks, medical, SNPs, genomics, systems biology, sequence analysis and coding, proteomics and structure, databases, Web and text analysis.

Computational Intelligence and Intelligent Systems

Author : Zhenhua Li
Publisher : Springer
ISBN 13 : 3642049621
Total Pages : 496 pages
Book Rating : 4.6/5 (42 download)

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Book Synopsis Computational Intelligence and Intelligent Systems by : Zhenhua Li

Download or read book Computational Intelligence and Intelligent Systems written by Zhenhua Li and published by Springer. This book was released on 2009-11-03 with total page 496 pages. Available in PDF, EPUB and Kindle. Book excerpt: Volumes CCIS 51 and LNCS 5812 constitute the proceedings of the Fourth Interational Symposium on Intelligence Computation and Applications, ISICA 2009, held in Huangshi, China, during October 23-25. ISICA 2009 attracted over 300 submissions. Through rigorous reviews, 58 papers were included in LNCS 5821, and 54 papers were collected in CCIS 51. ISICA conferences are one of the first series of international conferences on computational intelligence that combine elements of learning, adaptation, evolution and fuzzy logic to create programs as alternative solutions to artificial intelligence.

Constrained Optimization and Lagrange Multiplier Methods

Author : Dimitri P. Bertsekas
Publisher : Academic Press
ISBN 13 : 148326047X
Total Pages : 412 pages
Book Rating : 4.4/5 (832 download)

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Book Synopsis Constrained Optimization and Lagrange Multiplier Methods by : Dimitri P. Bertsekas

Download or read book Constrained Optimization and Lagrange Multiplier Methods written by Dimitri P. Bertsekas and published by Academic Press. This book was released on 2014-05-10 with total page 412 pages. Available in PDF, EPUB and Kindle. Book excerpt: Computer Science and Applied Mathematics: Constrained Optimization and Lagrange Multiplier Methods focuses on the advancements in the applications of the Lagrange multiplier methods for constrained minimization. The publication first offers information on the method of multipliers for equality constrained problems and the method of multipliers for inequality constrained and nondifferentiable optimization problems. Discussions focus on approximation procedures for nondifferentiable and ill-conditioned optimization problems; asymptotically exact minimization in the methods of multipliers; duality framework for the method of multipliers; and the quadratic penalty function method. The text then examines exact penalty methods, including nondifferentiable exact penalty functions; linearization algorithms based on nondifferentiable exact penalty functions; differentiable exact penalty functions; and local and global convergence of Lagrangian methods. The book ponders on the nonquadratic penalty functions of convex programming. Topics include large scale separable integer programming problems and the exponential method of multipliers; classes of penalty functions and corresponding methods of multipliers; and convergence analysis of multiplier methods. The text is a valuable reference for mathematicians and researchers interested in the Lagrange multiplier methods.

Learning and Intelligent Optimization

Author : Christian Blum
Publisher : Springer Science & Business Media
ISBN 13 : 3642137997
Total Pages : 357 pages
Book Rating : 4.6/5 (421 download)

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Book Synopsis Learning and Intelligent Optimization by : Christian Blum

Download or read book Learning and Intelligent Optimization written by Christian Blum and published by Springer Science & Business Media. This book was released on 2010-07-07 with total page 357 pages. Available in PDF, EPUB and Kindle. Book excerpt: The LNCS series reports state-of-the-art results in computer science research, development, and education, at a high level and in both printed and electronic form. Enjoying tight cooperation with the R&D community, with numerous individuals, as well as with prestigious organizations and societies, LNCS has grown into the most comprehensive computer science research forum available. The scope of LNCS, including its subseries LNAI and LNBI, spans the whole range of computer science and information technology including interdisciplinary topics in a variety of application fields. In parallel to the printed book, each new volume is published electronically in LNCS Online.

Neural Information Processing

Author : Bao-Liang Lu
Publisher : Springer Science & Business Media
ISBN 13 : 364224954X
Total Pages : 788 pages
Book Rating : 4.6/5 (422 download)

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Book Synopsis Neural Information Processing by : Bao-Liang Lu

Download or read book Neural Information Processing written by Bao-Liang Lu and published by Springer Science & Business Media. This book was released on 2011-10-26 with total page 788 pages. Available in PDF, EPUB and Kindle. Book excerpt: The three volume set LNCS 7062, LNCS 7063, and LNCS 7064 constitutes the proceedings of the 18th International Conference on Neural Information Processing, ICONIP 2011, held in Shanghai, China, in November 2011. The 262 regular session papers presented were carefully reviewed and selected from numerous submissions. The papers of part I are organized in topical sections on perception, emotion and development, bioinformatics, biologically inspired vision and recognition, bio-medical data analysis, brain signal processing, brain-computer interfaces, brain-like systems, brain-realistic models for learning, memory and embodied cognition, Clifford algebraic neural networks, combining multiple learners, computational advances in bioinformatics, and computational-intelligent human computer interaction. The second volume is structured in topical sections on cybersecurity and data mining workshop, data mining and knowledge doscovery, evolutionary design and optimisation, graphical models, human-originated data analysis and implementation, information retrieval, integrating multiple nature-inspired approaches, kernel methods and support vector machines, and learning and memory. The third volume contains all the contributions connected with multi-agent systems, natural language processing and intelligent Web information processing, neural encoding and decoding, neural network models, neuromorphic hardware and implementations, object recognition, visual perception modelling, and advances in computational intelligence methods based pattern recognition.

Author :
Publisher : IOS Press
ISBN 13 :
Total Pages : 4947 pages
Book Rating : 4./5 ( download)

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Book Synopsis by :

Download or read book written by and published by IOS Press. This book was released on with total page 4947 pages. Available in PDF, EPUB and Kindle. Book excerpt:

AI 2013: Advances in Artificial Intelligence

Author : Stephen Cranefield
Publisher : Springer
ISBN 13 : 3319036807
Total Pages : 534 pages
Book Rating : 4.3/5 (19 download)

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Book Synopsis AI 2013: Advances in Artificial Intelligence by : Stephen Cranefield

Download or read book AI 2013: Advances in Artificial Intelligence written by Stephen Cranefield and published by Springer. This book was released on 2013-11-08 with total page 534 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the 26th Australasian Joint Conference on Artificial Intelligence, AI 2013, held in Dunedin, New Zealand, in December 2013. The 35 revised full papers and 19 revised short papers presented were carefully reviewed and selected from 120 submissions. The papers are organized in topical sections as agents; AI applications; cognitive modelling; computer vision; constraint satisfaction, search and optimisation; evolutionary computation; game playing; knowledge representation and reasoning; machine learning and data mining; natural language processing and information retrieval; planning and scheduling.

Principles and Practice of Constraint Programming

Author : Peter J. Stuckey
Publisher : Springer Science & Business Media
ISBN 13 : 3540859578
Total Pages : 662 pages
Book Rating : 4.5/5 (48 download)

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Book Synopsis Principles and Practice of Constraint Programming by : Peter J. Stuckey

Download or read book Principles and Practice of Constraint Programming written by Peter J. Stuckey and published by Springer Science & Business Media. This book was released on 2008-08-28 with total page 662 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume contains the proceedings of the 14th International Conference on Principles and Practice of Constraint Programming (CP 2008) held in Sydney, Australia, September 14–18, 2008. The conference was held in conjunction with the International Conference on Automated Planning and Scheduling (ICAPS 2008) and the International Conference on Knowledge Representation and R- soning (KR 2008). Information about the conference can be found at the w- sitehttp://www. unimelb. edu. au/cp2008/. Held annually, the CP conference series is the premier international conference on constraint programming. The conference focuses on all aspects of computing with constraints. The CP conf- ence series is organized by the Association for Constraint Programming (ACP). Information about the conferences in the series can be found on the Web at http://www. cs. ualberta. ca/~ai/cp/. Information about ACP can be found athttp://www. a4cp. org/. CP 2008 included two calls for contributions: a call for research papers, - scribing novel contributions in the ?eld, and a call for application papers, - scribing applications of constraint technology. For the ?rst time authors could directly submit short papers for consideration by the committee. The research track received 84 long submissions and 21 short submissions and the application track received 15 long submissions. Each paper received at least three reviews, which the authors had the opportunity to see and to react to, before the papers and their reviews were discussed extensively by the members of the Program Committee.

Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics

Author : Marylyn D. Ritchie
Publisher : Springer Science & Business Media
ISBN 13 : 3642122108
Total Pages : 259 pages
Book Rating : 4.6/5 (421 download)

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Book Synopsis Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics by : Marylyn D. Ritchie

Download or read book Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics written by Marylyn D. Ritchie and published by Springer Science & Business Media. This book was released on 2010-03-25 with total page 259 pages. Available in PDF, EPUB and Kindle. Book excerpt: The ?eld of bioinformatics has two main objectives: the creation and main- nance of biological databases, and the discovery of knowledge from life sciences datainordertounravelthemysteriesofbiologicalfunction,leadingtonewdrugs andtherapiesforhumandisease. Life sciencesdatacomeinthe formofbiological sequences, structures, pathways, or literature. One major aspect of discovering biological knowledge is to search, predict, or model speci'c information in a given dataset in order to generate new interesting knowledge. Computer science methods such as evolutionary computation, machine learning, and data mining all have a great deal to o'er the ?eld of bioinformatics. The goal of the 8th - ropean Conference on Evolutionary Computation, Machine Learning, and Data Mining in Bioinformatics (EvoBIO 2010) was to bring together experts in these ?elds in order to discuss new and novel methods for tackling complex biological problems. The 8th EvoBIO conference was held in Istanbul, Turkey during April 7-9, 2010attheIstanbulTechnicalUniversity. EvoBIO2010washeldjointlywiththe 13th European Conference on Genetic Programming (EuroGP 2010), the 10th European Conference on Evolutionary Computation in Combinatorial Opti- sation (EvoCOP 2010), and the conference on the applications of evolutionary computation,EvoApplications. Collectively,the conferences areorganizedunder the name Evo* (www. evostar. org). EvoBIO, held annually as a workshop since 2003, became a conference in 2007 and it is now the premiere European event for those interested in the interface between evolutionary computation, machine learning, data mining, bioinformatics, and computational biology.

Encyclopedia of Optimization

Author : Christodoulos A. Floudas
Publisher : Springer Science & Business Media
ISBN 13 : 0387747583
Total Pages : 4646 pages
Book Rating : 4.3/5 (877 download)

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Book Synopsis Encyclopedia of Optimization by : Christodoulos A. Floudas

Download or read book Encyclopedia of Optimization written by Christodoulos A. Floudas and published by Springer Science & Business Media. This book was released on 2008-09-04 with total page 4646 pages. Available in PDF, EPUB and Kindle. Book excerpt: The goal of the Encyclopedia of Optimization is to introduce the reader to a complete set of topics that show the spectrum of research, the richness of ideas, and the breadth of applications that has come from this field. The second edition builds on the success of the former edition with more than 150 completely new entries, designed to ensure that the reference addresses recent areas where optimization theories and techniques have advanced. Particularly heavy attention resulted in health science and transportation, with entries such as "Algorithms for Genomics", "Optimization and Radiotherapy Treatment Design", and "Crew Scheduling".

Intelligent Distributed Computing IV

Author : Mohammad Essaaidi
Publisher : Springer Science & Business Media
ISBN 13 : 3642152104
Total Pages : 316 pages
Book Rating : 4.6/5 (421 download)

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Book Synopsis Intelligent Distributed Computing IV by : Mohammad Essaaidi

Download or read book Intelligent Distributed Computing IV written by Mohammad Essaaidi and published by Springer Science & Business Media. This book was released on 2010-08-12 with total page 316 pages. Available in PDF, EPUB and Kindle. Book excerpt: The 33 peer-reviewed contributions published in this book address a wide range of topics related to the theory and applications of intelligent distributed computing and multi-agent systems. They cover topics from bio-informatics to semantic web services.

Evolutionary Computation in Bioinformatics

Author : Gary Fogel
Publisher : Morgan Kaufmann
ISBN 13 : 9781558607972
Total Pages : 432 pages
Book Rating : 4.6/5 (79 download)

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Book Synopsis Evolutionary Computation in Bioinformatics by : Gary Fogel

Download or read book Evolutionary Computation in Bioinformatics written by Gary Fogel and published by Morgan Kaufmann. This book was released on 2003 with total page 432 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book offers a definitive resource that bridges biology and evolutionary computation. The authors have written an introduction to biology and bioinformatics for computer scientists, plus an introduction to evolutionary computation for biologists and for computer scientists unfamiliar with these techniques.

Computational Methods for Protein Folding, Volume 120

Author : Richard A. Friesner
Publisher : John Wiley & Sons
ISBN 13 : 0471465232
Total Pages : 544 pages
Book Rating : 4.4/5 (714 download)

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Book Synopsis Computational Methods for Protein Folding, Volume 120 by : Richard A. Friesner

Download or read book Computational Methods for Protein Folding, Volume 120 written by Richard A. Friesner and published by John Wiley & Sons. This book was released on 2004-04-07 with total page 544 pages. Available in PDF, EPUB and Kindle. Book excerpt: Since the first attempts to model proteins on a computer began almost thirty years ago, our understanding of protein structure and dynamics has dramatically increased. Spectroscopic measurement techniques continue to improve in resolution and sensitivity, allowing a wealth of information to be obtained with regard to the kinetics of protein folding and unfolding, and complementing the detailed structural picture of the folded state. Concurrently, algorithms, software, and computational hardware have progressed to the point where both structural and kinetic problems may be studied with a fair degree of realism. Despite these advances, many major challenges remain in understanding protein folding at both the conceptual and practical levels. Computational Methods for Protein Folding seeks to illuminate recent advances in computational modeling of protein folding in a way that will be useful to physicists, chemists, and chemical physicists. Covering a broad spectrum of computational methods and practices culled from a variety of research fields, the editors present a full range of models that, together, provide a thorough and current description of all aspects of protein folding. A valuable resource for both students and professionals in the field, the book will be of value both as a cutting-edge overview of existing information and as a catalyst for inspiring new studies. Computational Methods for Protein Folding is the 120th volume in the acclaimed series Advances in Chemical Physics, a compilation of scholarly works dedicated to the dissemination of contemporary advances in chemical physics, edited by Nobel Prize-winner Ilya Prigogine.

PRICAI 2014: Trends in Artificial Intelligence

Author : Duc-Nghia Pham
Publisher : Springer
ISBN 13 : 3319135600
Total Pages : 1122 pages
Book Rating : 4.3/5 (191 download)

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Book Synopsis PRICAI 2014: Trends in Artificial Intelligence by : Duc-Nghia Pham

Download or read book PRICAI 2014: Trends in Artificial Intelligence written by Duc-Nghia Pham and published by Springer. This book was released on 2014-11-12 with total page 1122 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the 13th Pacific Rim Conference on Artificial Intelligence, PRICAI 2014, held in Gold Coast, Queensland, Australia, in December 2014. The 74 full papers and 20 short papers presented in this volume were carefully reviewed and selected from 203 submissions. The topics include inference; reasoning; robotics; social intelligence. AI foundations; applications of AI; agents; Bayesian networks; neural networks; Markov networks; bioinformatics; cognitive systems; constraint satisfaction; data mining and knowledge discovery; decision theory; evolutionary computation; games and interactive entertainment; heuristics; knowledge acquisition and ontology; knowledge representation, machine learning; multimodal interaction; natural language processing; planning and scheduling; probabilistic.

Exploitation of Linkage Learning in Evolutionary Algorithms

Author : Ying-ping Chen
Publisher : Springer Science & Business Media
ISBN 13 : 3642128343
Total Pages : 245 pages
Book Rating : 4.6/5 (421 download)

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Book Synopsis Exploitation of Linkage Learning in Evolutionary Algorithms by : Ying-ping Chen

Download or read book Exploitation of Linkage Learning in Evolutionary Algorithms written by Ying-ping Chen and published by Springer Science & Business Media. This book was released on 2010-04-16 with total page 245 pages. Available in PDF, EPUB and Kindle. Book excerpt: One major branch of enhancing the performance of evolutionary algorithms is the exploitation of linkage learning. This monograph aims to capture the recent progress of linkage learning, by compiling a series of focused technical chapters to keep abreast of the developments and trends in the area of linkage. In evolutionary algorithms, linkage models the relation between decision variables with the genetic linkage observed in biological systems, and linkage learning connects computational optimization methodologies and natural evolution mechanisms. Exploitation of linkage learning can enable us to design better evolutionary algorithms as well as to potentially gain insight into biological systems. Linkage learning has the potential to become one of the dominant aspects of evolutionary algorithms; research in this area can potentially yield promising results in addressing the scalability issues.

Chemical Modelling

Author : Michael Springborg
Publisher : Royal Society of Chemistry
ISBN 13 : 1782621156
Total Pages : 362 pages
Book Rating : 4.7/5 (826 download)

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Book Synopsis Chemical Modelling by : Michael Springborg

Download or read book Chemical Modelling written by Michael Springborg and published by Royal Society of Chemistry. This book was released on 2015-11-18 with total page 362 pages. Available in PDF, EPUB and Kindle. Book excerpt: Chemical Modelling covers a wide range of disciplines and is the first stop for any materials scientist, biochemist, chemist or molecular physicist wishing to acquaint themselves with major developments and current opinion in the applications and theory of chemical modelling.