Genetic Dissection Of Yield Component Traits In Zea Mays Using Multiparent Advanced Generation Intercross Populations

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The Maize Genome

Author : Jeffrey Bennetzen
Publisher : Springer
ISBN 13 : 3319974270
Total Pages : 390 pages
Book Rating : 4.3/5 (199 download)

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Book Synopsis The Maize Genome by : Jeffrey Bennetzen

Download or read book The Maize Genome written by Jeffrey Bennetzen and published by Springer. This book was released on 2018-11-24 with total page 390 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book discusses advances in our understanding of the structure and function of the maize genome since publication of the original B73 reference genome in 2009, and the progress in translating this knowledge into basic biology and trait improvement. Maize is an extremely important crop, providing a large proportion of the world’s human caloric intake and animal feed, and serving as a model species for basic and applied research. The exceptionally high level of genetic diversity within maize presents opportunities and challenges in all aspects of maize genetics, from sequencing and genotyping to linking genotypes to phenotypes. Topics covered in this timely book range from (i) genome sequencing and genotyping techniques, (ii) genome features such as centromeres and epigenetic regulation, (iii) tools and resources available for trait genomics, to (iv) applications of allele mining and genomics-assisted breeding. This book is a valuable resource for researchers and students interested in maize genetics and genomics.

Handbook of Plant and Crop Stress

Author : Mohammad Pessarakli
Publisher : CRC Press
ISBN 13 : 143981399X
Total Pages : 1248 pages
Book Rating : 4.4/5 (398 download)

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Book Synopsis Handbook of Plant and Crop Stress by : Mohammad Pessarakli

Download or read book Handbook of Plant and Crop Stress written by Mohammad Pessarakli and published by CRC Press. This book was released on 2016-04-19 with total page 1248 pages. Available in PDF, EPUB and Kindle. Book excerpt: The dynamic and expanding knowledge of environmental stresses and their effects on plants and crops have resulted in the compilation of a large volume of information in the last ten years since the publication of the second edition of the Handbook of Plant and Crop Stress. With 90 percent new material and a new organization that reflects this incre

The Applications of New Multi-Locus GWAS Methodologies in the Genetic Dissection of Complex Traits

Author : Yuan-Ming Zhang
Publisher : Frontiers Media SA
ISBN 13 : 2889458342
Total Pages : 236 pages
Book Rating : 4.8/5 (894 download)

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Book Synopsis The Applications of New Multi-Locus GWAS Methodologies in the Genetic Dissection of Complex Traits by : Yuan-Ming Zhang

Download or read book The Applications of New Multi-Locus GWAS Methodologies in the Genetic Dissection of Complex Traits written by Yuan-Ming Zhang and published by Frontiers Media SA. This book was released on 2019-06-19 with total page 236 pages. Available in PDF, EPUB and Kindle. Book excerpt: Genome-Wide Association Studies (GWAS) are widely used in the genetic dissection of complex traits. Most existing methods are based on single-marker association in genome-wide scans with population structure and polygenic background controls. To control the false positive rate, the Bonferroni correction for multiple tests is frequently adopted. This stringent correction results in the exclusion of important loci, especially for GWAS in crop genetics. To address this issue, multi-locus GWAS methodologies have been recommended, i.e., FASTmrEMMA, ISIS EM-BLASSO, mrMLM, FASTmrMLM, pLARmEB, pKWmEB and FarmCPU. In this Research Topic, our purpose is to clarify some important issues in the application of multi-locus GWAS methods. Here we discuss the following subjects: First, we discuss the advantages of new multi-locus GWAS methods over the widely-used single-locus GWAS methods in the genetic dissection of complex traits, metabolites and gene expression levels. Secondly, large experiment error in the field measurement of phenotypic values for complex traits in crop genetics results in relatively large P-values in GWAS, indicating the existence of small number of significantly associated SNPs. To solve this issue, a less stringent P-value critical value is often adopted, i.e., 0.001, 0.0001 and 1/m (m is the number of markers). Although lowering the stringency with which an association is made could identify more hits, confidence in these hits would significantly drop. In this Research Topic we propose a new threshold of significant QTN (LOD=3.0 or P-value=2.0e-4) in multi-locus GWAS to balance high power and low false positive rate. Thirdly, heritability missing in GWAS is a common phenomenon, and a series of scientists have explained the reasons why the heritability is missing. In this Research Topic, we also add one additional reason and propose the joint use of several GWAS methodologies to capture more QTNs. Thus, overall estimated heritability would be increased. Finally, we discuss how to select and use these multi-locus GWAS methods.

Ecological Genomics

Author : Christian R. Landry
Publisher : Springer Science & Business Media
ISBN 13 : 9400773471
Total Pages : 358 pages
Book Rating : 4.4/5 (7 download)

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Book Synopsis Ecological Genomics by : Christian R. Landry

Download or read book Ecological Genomics written by Christian R. Landry and published by Springer Science & Business Media. This book was released on 2013-11-25 with total page 358 pages. Available in PDF, EPUB and Kindle. Book excerpt: Researchers in the field of ecological genomics aim to determine how a genome or a population of genomes interacts with its environment across ecological and evolutionary timescales. Ecological genomics is trans-disciplinary by nature. Ecologists have turned to genomics to be able to elucidate the mechanistic bases of the biodiversity their research tries to understand. Genomicists have turned to ecology in order to better explain the functional cellular and molecular variation they observed in their model organisms. We provide an advanced-level book that covers this recent research and proposes future development for this field. A synthesis of the field of ecological genomics emerges from this volume. Ecological Genomics covers a wide array of organisms (microbes, plants and animals) in order to be able to identify central concepts that motivate and derive from recent investigations in different branches of the tree of life. Ecological Genomics covers 3 fields of research that have most benefited from the recent technological and conceptual developments in the field of ecological genomics: the study of life-history evolution and its impact of genome architectures; the study of the genomic bases of phenotypic plasticity and the study of the genomic bases of adaptation and speciation.

Plant Genetics and Molecular Biology

Author : Rajeev K. Varshney
Publisher : Springer
ISBN 13 : 3319913131
Total Pages : 306 pages
Book Rating : 4.3/5 (199 download)

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Book Synopsis Plant Genetics and Molecular Biology by : Rajeev K. Varshney

Download or read book Plant Genetics and Molecular Biology written by Rajeev K. Varshney and published by Springer. This book was released on 2018-09-04 with total page 306 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book reviews the latest advances in multiple fields of plant biotechnology and the opportunities that plant genetics, genomics and molecular biology have offered for agriculture improvement. Advanced technologies can dramatically enhance our capacity in understanding the molecular basis of traits and utilizing the available resources for accelerated development of high yielding, nutritious, input-use efficient and climate-smart crop varieties. In this book, readers will discover the significant advances in plant genetics, structural and functional genomics, trait and gene discovery, transcriptomics, proteomics, metabolomics, epigenomics, nanotechnology and analytical & decision support tools in breeding. This book appeals to researchers, academics and other stakeholders of global agriculture.

Genomics in Plant Sciences: Understanding and Development of Stress-Tolerant Plants

Author : Yusuf Khan
Publisher : Frontiers Media SA
ISBN 13 : 2832527809
Total Pages : 189 pages
Book Rating : 4.8/5 (325 download)

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Book Synopsis Genomics in Plant Sciences: Understanding and Development of Stress-Tolerant Plants by : Yusuf Khan

Download or read book Genomics in Plant Sciences: Understanding and Development of Stress-Tolerant Plants written by Yusuf Khan and published by Frontiers Media SA. This book was released on 2023-06-29 with total page 189 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Genotyping by Sequencing for Crop Improvement

Author : Humira Sonah
Publisher : John Wiley & Sons
ISBN 13 : 1119745675
Total Pages : 404 pages
Book Rating : 4.1/5 (197 download)

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Book Synopsis Genotyping by Sequencing for Crop Improvement by : Humira Sonah

Download or read book Genotyping by Sequencing for Crop Improvement written by Humira Sonah and published by John Wiley & Sons. This book was released on 2022-03-29 with total page 404 pages. Available in PDF, EPUB and Kindle. Book excerpt: OGENOTYPING BY SEQUENCING FOR CROP IMPROVEMENT A thoroughly up-to-date exploration of genotyping-by-sequencing technologies and related methods in plant science In Genotyping by Sequencing for Crop Improvement, a team of distinguished researchers delivers an in-depth and current exploration of the latest advances in genotyping-by-sequencing (GBS) methods, the statistical approaches used to analyze GBS data, and its applications, including quantitative trait loci (QTL) mapping, genome-wide association studies (GWAS), and genomic selection (GS) in crop improvement. This edited volume includes insightful contributions on a variety of relevant topics, like advanced molecular markers, high-throughput genotyping platforms, whole genome resequencing, QTL mapping with advanced mapping populations, analytical pipelines for GBS analysis, and more. The distinguished contributors explore traditional and advanced markers used in plant genotyping in extensive detail, and advanced genotyping platforms that cater to unique research purposes are discussed, as is the whole-genome resequencing (WGR) methodology. The included chapters also examine the applications of these technologies in several different crop categories, including cereals, pulses, oilseeds, and commercial crops. Genotyping by Sequencing for Crop Improvement also offers: A thorough introduction to molecular marker techniques and recent advancements in the technology Comprehensive explorations of the genotyping of seeds while preserving their viability, as well as advances in genomic selection Practical discussions of opportunities and challenges relating to high throughput genotyping in polyploid crops In-depth examinations of recent advances and applications of GBS, GWAS, and GS in cereals, pulses, oilseeds, millets, and commercial crops Perfect for practicing plant scientists with an interest in genotyping-by-sequencing technology, Genotyping by Sequencing for Crop Improvement will also earn a place in the libraries of researchers and students seeking a one-stop reference on the foundational aspects of – and recent advances in – genotyping-by-sequencing, genome-wide association studies, and genomic selection.

Integrated Disease Management of Wheat and Barley

Author : Richard Oliver
Publisher : Burleigh Dodds Series in Agric
ISBN 13 : 9781786762160
Total Pages : 420 pages
Book Rating : 4.7/5 (621 download)

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Book Synopsis Integrated Disease Management of Wheat and Barley by : Richard Oliver

Download or read book Integrated Disease Management of Wheat and Barley written by Richard Oliver and published by Burleigh Dodds Series in Agric. This book was released on 2018-09-21 with total page 420 pages. Available in PDF, EPUB and Kindle. Book excerpt: Diseases remain a serious problem in cereal cultivation. The first parts of the book review current research on fungal diseases of cereals and the challenge of fungicide resistance. The book then discusses breeding resistant varieties and methods for integrated disease management of cereals.

Stripe Rust

Author : Xianming Chen
Publisher : Springer
ISBN 13 : 9402411119
Total Pages : 723 pages
Book Rating : 4.4/5 (24 download)

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Book Synopsis Stripe Rust by : Xianming Chen

Download or read book Stripe Rust written by Xianming Chen and published by Springer. This book was released on 2017-07-11 with total page 723 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book comprehensively introduces stripe rust disease, its development and its integral control. Covering the biology, genetics, genome, and functional genomics of the pathogen, it also discusses host and non-host resistance, their interactions and the epidemiology of the disease. It is intended for scientists, postgraduates and undergraduate studying stripe rust, plant pathology, crop breeding, crop protection and agricultural science, but is also a valuable reference book for consultants and administrators in agricultural businesses and education.

Plant Breeding: Past, Present and Future

Author : John E. Bradshaw
Publisher : Springer
ISBN 13 : 3319232851
Total Pages : 710 pages
Book Rating : 4.3/5 (192 download)

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Book Synopsis Plant Breeding: Past, Present and Future by : John E. Bradshaw

Download or read book Plant Breeding: Past, Present and Future written by John E. Bradshaw and published by Springer. This book was released on 2016-03-08 with total page 710 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book aims to help plant breeders by reviewing past achievements, currently successful practices, and emerging methods and techniques. Theoretical considerations are also presented to strike the right balance between being as simple as possible but as complex as necessary. The United Nations predicts that the global human population will continue rising to 9.0 billion by 2050. World food production will need to increase between 70-100 per cent in just 40 years. First generation bio-fuels are also using crops and cropland to produce energy rather than food. In addition, land area used for agriculture may remain static or even decrease as a result of degradation and climate change, despite more land being theoretically available, unless crops can be bred which tolerate associated abiotic stresses. Lastly, it is unlikely that steps can be taken to mitigate all of the climate change predicted to occur by 2050, and beyond, and hence adaptation of farming systems and crop production will be required to reduce predicted negative effects on yields that will occur without crop adaptation. Substantial progress will therefore be required in bridging the yield gap between what is currently achieved per unit of land and what should be possible in future, with the best farming methods and best storage and transportation of food, given the availability of suitably adapted cultivars, including adaptation to climate change. My book is divided into four parts: Part I is an historical introduction; Part II deals with the origin of genetic variation by mutation and recombination of DNA; Part III explains how the mating system of a crop species determines the genetic structure of its landraces; Part IV considers the three complementary options for future progress: use of sexual reproduction in further conventional breeding, base broadening and introgression; mutation breeding; and genetically modified crops.

Plant Breeding in the Omics Era

Author : Rodomiro Ortiz Ríos
Publisher : Springer
ISBN 13 : 3319205323
Total Pages : 250 pages
Book Rating : 4.3/5 (192 download)

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Book Synopsis Plant Breeding in the Omics Era by : Rodomiro Ortiz Ríos

Download or read book Plant Breeding in the Omics Era written by Rodomiro Ortiz Ríos and published by Springer. This book was released on 2015-09-16 with total page 250 pages. Available in PDF, EPUB and Kindle. Book excerpt: The field of plant breeding has grown rapidly in the last decade with breakthrough research in genetics and genomics, inbred development, population improvement, hybrids, clones, self-pollinated crops, polyploidy, transgenic breeding and more. This book discusses the latest developments in all these areas but explores the next generation of needs and discoveries including omics beyond genomics, cultivar seeds and intellectual and property rights. This book is a leading-edge publication of the latest results and forecasts important areas of future needs and applications.

Maize Kernel Development

Author : Brian A Larkins
Publisher : CABI
ISBN 13 : 178639121X
Total Pages : 255 pages
Book Rating : 4.7/5 (863 download)

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Book Synopsis Maize Kernel Development by : Brian A Larkins

Download or read book Maize Kernel Development written by Brian A Larkins and published by CABI. This book was released on 2017-11-21 with total page 255 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is an authoritative book that acts as a guide to understanding maize kernel development. Written by a team of experts, it covers topics spanning pre- and post-fertilization events, embryo and endosperm development, grain filling and maturation, and factors influencing crop yield. It explores the significance of maize and other cereal grains, existing hypotheses and research, and important gaps in our knowledge and how we might fill them. This is a valuable resource for researchers of maize and other cereals, and anyone working on basic or applied science in the fields of seed development, plant genetics, and crop physiology.

Handbook of Statistical Genomics

Author : David J. Balding
Publisher : John Wiley & Sons
ISBN 13 : 1119429250
Total Pages : 1740 pages
Book Rating : 4.1/5 (194 download)

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Book Synopsis Handbook of Statistical Genomics by : David J. Balding

Download or read book Handbook of Statistical Genomics written by David J. Balding and published by John Wiley & Sons. This book was released on 2019-07-09 with total page 1740 pages. Available in PDF, EPUB and Kindle. Book excerpt: A timely update of a highly popular handbook on statistical genomics This new, two-volume edition of a classic text provides a thorough introduction to statistical genomics, a vital resource for advanced graduate students, early-career researchers and new entrants to the field. It introduces new and updated information on developments that have occurred since the 3rd edition. Widely regarded as the reference work in the field, it features new chapters focusing on statistical aspects of data generated by new sequencing technologies, including sequence-based functional assays. It expands on previous coverage of the many processes between genotype and phenotype, including gene expression and epigenetics, as well as metabolomics. It also examines population genetics and evolutionary models and inference, with new chapters on the multi-species coalescent, admixture and ancient DNA, as well as genetic association studies including causal analyses and variant interpretation. The Handbook of Statistical Genomics focuses on explaining the main ideas, analysis methods and algorithms, citing key recent and historic literature for further details and references. It also includes a glossary of terms, acronyms and abbreviations, and features extensive cross-referencing between chapters, tying the different areas together. With heavy use of up-to-date examples and references to web-based resources, this continues to be a must-have reference in a vital area of research. Provides much-needed, timely coverage of new developments in this expanding area of study Numerous, brand new chapters, for example covering bacterial genomics, microbiome and metagenomics Detailed coverage of application areas, with chapters on plant breeding, conservation and forensic genetics Extensive coverage of human genetic epidemiology, including ethical aspects Edited by one of the leading experts in the field along with rising stars as his co-editors Chapter authors are world-renowned experts in the field, and newly emerging leaders. The Handbook of Statistical Genomics is an excellent introductory text for advanced graduate students and early-career researchers involved in statistical genetics.

Genetics and Genomics of Rice

Author : Qifa Zhang
Publisher : Springer Science & Business Media
ISBN 13 : 1461479037
Total Pages : 406 pages
Book Rating : 4.4/5 (614 download)

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Book Synopsis Genetics and Genomics of Rice by : Qifa Zhang

Download or read book Genetics and Genomics of Rice written by Qifa Zhang and published by Springer Science & Business Media. This book was released on 2013-08-21 with total page 406 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides a comprehensive coverage of the advances in genetics and genomics research on rice. The chapters feature the latest developments in rice research and cover such topics as the tools and resources for the functional analysis of rice genes, the identification of useful genes for rice improvement, the present understanding of rice development and biological processes, and the application of this present understanding towards rice improvement. The volume also features a perspective on synthesis and prospects, laying the groundwork for future advances in rice genetics and genomics. Written by authorities in the field, Genetics and Genomics of Rice will serve as an invaluable reference for rice researchers for years to come.

Characterizing and Improving Traits for Resilient Crop Development

Author : Rajib Roychowdhury
Publisher : Frontiers Media SA
ISBN 13 : 2832538886
Total Pages : 247 pages
Book Rating : 4.8/5 (325 download)

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Book Synopsis Characterizing and Improving Traits for Resilient Crop Development by : Rajib Roychowdhury

Download or read book Characterizing and Improving Traits for Resilient Crop Development written by Rajib Roychowdhury and published by Frontiers Media SA. This book was released on 2023-11-13 with total page 247 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Genetics and Biotechnology

Author : Ulrich Kück
Publisher : Springer Science & Business Media
ISBN 13 : 3662103648
Total Pages : 372 pages
Book Rating : 4.6/5 (621 download)

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Book Synopsis Genetics and Biotechnology by : Ulrich Kück

Download or read book Genetics and Biotechnology written by Ulrich Kück and published by Springer Science & Business Media. This book was released on 2013-03-09 with total page 372 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mycology, the study of fungi, originated as a subdiscipline of botany and was a descriptive discipline, largely neglected as an experimental science until the early years of this century. A seminal paper by Blakeslee in 1904 provided evidence for self incompatibility, termed "heterothallism", and stimulated interest in studies related to the control of sexual reproduction in fungi by mating-type specificities. Soon to follow was the demonstration that sexually reproducing fungi exhibit Mendelian inheritance and that it was possible to conduct formal genetic analysis with fungi. The names Burgeff, Kniep and Lindegren are all associated with this early period of fungal genetics research. These studies and the discovery of penicillin by Fleming, who shared a Nobel Prize in 1945, provided further impetus for experimental research with fungi. Thus began a period of interest in mutation induction and analysis of mutants for bio chemical traits. Such fundamental research, conducted largely with Neurospora crassa, led to the one gene: one enzyme hypothesis and to a second Nobel Prize for fungal research awarded to Beadle and Tatum in 1958. Fundamental research in biochemical genetics was extended to other fungi, especially to Saccharomyces cere visiae, and by the mid-1960s fungal systems were much favored for studies in eukaryotic molecular biology and were soon able to compete with bacterial systems in the molecular arena.

Genetic and Genomic Resources of Grain Legume Improvement

Author : Mohar Singh
Publisher : Newnes
ISBN 13 : 0123984947
Total Pages : 322 pages
Book Rating : 4.1/5 (239 download)

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Book Synopsis Genetic and Genomic Resources of Grain Legume Improvement by : Mohar Singh

Download or read book Genetic and Genomic Resources of Grain Legume Improvement written by Mohar Singh and published by Newnes. This book was released on 2013-07-18 with total page 322 pages. Available in PDF, EPUB and Kindle. Book excerpt: Grain legumes, including common-bean, chickpea, pigeonpea, pea, cowpea, lentil and others, form important constituents of global diets, both vegetarian and non-vegetarian. Despite this significant role, global production has increased only marginally in the past 50 years. The slow production growth, along with a rising human population and improved buying capacity has substantially reduced the per capita availability of food legumes. Changes in environmental climate have also had significant impact on production, creating a need to identify stable donors among genetic resources for environmentally robust genes and designing crops resilient to climate change. Genetic and Genomic Resources of Grain Legume Improvement is the first book to bring together the latest resources in plant genetics and genomics to facilitate the identification of specific germplasm, trait mapping and allele mining to more effectively develop biotic and abiotic-stress-resistant grains. This book will be an invaluable resource for researchers, crop biologists and students working with crop development. - Explores origin, distribution and diversity of grain legumes - Presents information on germplasm collection, evaluation and maintenance - Offers insight into pre-breeding/germplasm enhancement efforts - Integrates genomic and genetic resources in crop improvement - Internationally contributed work