Computational Peptide Science

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Computational Peptide Science

Author : Thomas Simonson
Publisher :
ISBN 13 : 9781071618554
Total Pages : 427 pages
Book Rating : 4.6/5 (185 download)

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Book Synopsis Computational Peptide Science by : Thomas Simonson

Download or read book Computational Peptide Science written by Thomas Simonson and published by . This book was released on 2022 with total page 427 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume details current and new computational methodologies to study peptides. Chapters guide readers through antimicrobial peptides, foldability, amyloid sheet formation, membrane-active peptides, organized peptide assemblies, protein-peptide interfaces, prediction of peptide-MHC complexes, advanced free energy simulations for peptide binding, and methods for high throughput peptide or miniprotein design. Written in the format of the highly successful Methods in Molecular Biology series, each chapter includes an introduction to the topic, lists necessary materials, software, and reagents, includes tips on troubleshooting and known pitfalls, and step-by-step, readily reproducible protocols. Authoritative and cutting-edge, Computational Peptides Science: Methods and Protocols aims to provide concepts, methods, and guidelines to help both novices and experienced workers benefit from today's new opportunities and challenges.

Advances in Protein and Peptide Sciences

Author : Ben M. Dunn
Publisher : Bentham Science Publishers
ISBN 13 : 160805487X
Total Pages : 911 pages
Book Rating : 4.6/5 (8 download)

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Book Synopsis Advances in Protein and Peptide Sciences by : Ben M. Dunn

Download or read book Advances in Protein and Peptide Sciences written by Ben M. Dunn and published by Bentham Science Publishers. This book was released on 2013-10-30 with total page 911 pages. Available in PDF, EPUB and Kindle. Book excerpt: Advances in Protein and Peptide Sciences is a book series focused on leading-edge research on the structure, physical properties, and functions of proteins and peptides. The series presents highly cited contributions first published in the journal Current Protein and Peptide Science. Authors of these contributions have updated their work with new experimental data and references following their initial research. Each volume highlights a number of important topics in current research in the field of protein and peptide chemistry and molecular biology, including membrane proteins and their interactions with ligands, computational methods, and proteins in disease and biotechnology.

Computational Peptidology

Author : Peng Zhou
Publisher : Humana
ISBN 13 : 9781493948093
Total Pages : 0 pages
Book Rating : 4.9/5 (48 download)

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Book Synopsis Computational Peptidology by : Peng Zhou

Download or read book Computational Peptidology written by Peng Zhou and published by Humana. This book was released on 2016-09-24 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: In this volume expert researchers detail in silico methods widely used to study peptides. These include methods and techniques covering the database, molecular docking, dynamics simulation, data mining, de novo design and structure modeling of peptides and protein fragments. Chapters focus on integration and application of technologies to analyze, model, identify, predict, and design a wide variety of bioactive peptides, peptide analogues and peptide drugs, as well as peptide-based biomaterials. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and key tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Computational Peptidology seeks to aid scientists in the further study into this newly rising subfield.

De Novo Peptide Design

Author : Vibin Ramakrishnan
Publisher : Academic Press
ISBN 13 : 0323985432
Total Pages : 297 pages
Book Rating : 4.3/5 (239 download)

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Book Synopsis De Novo Peptide Design by : Vibin Ramakrishnan

Download or read book De Novo Peptide Design written by Vibin Ramakrishnan and published by Academic Press. This book was released on 2022-09-17 with total page 297 pages. Available in PDF, EPUB and Kindle. Book excerpt: De novo Peptide Design: Principles and Applications presents the latest developments in the fields of therapeutic peptides and bio-nanotechnology. The title focuses on the design of peptides, particularly how peptides may be tailored to specific functions. It includes computational and experimental protocols to assist in the design of peptides. Sections cover the basics of protein and peptide structure, modeling and simulation, solid phase peptide synthesis, peptide-based antibiotics, drug delivery, peptide nanomaterials, aromatic interactions directing nano-assembly, protein/peptide aggregation, therapeutic interventions against protein/peptide aggregation diseases, peptide based hydrogels, computational tools and algorithms for peptide design, and experimental protocols in peptide chemistry. In addition, the book covers key aspects in peptide design, providing a solution for researchers working within the 'peptidic universe' to create new therapeutic agents. Gives comprehensive coverage, including peptide design, modeling, synthesis and applications Presents emerging topics in the design of peptide-based therapeutics Details the latest developments in the fields of therapeutic peptides and bio-nanotechnology Considers peptide design and the tailoring of peptides to specific functions Offers computational tools and algorithms for peptide design and experimental protocols for peptide chemistry

Frontiers in Protein and Peptide Sciences

Author : Ben Dunn
Publisher : Bentham Science Publishers
ISBN 13 : 160805862X
Total Pages : 311 pages
Book Rating : 4.6/5 (8 download)

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Book Synopsis Frontiers in Protein and Peptide Sciences by : Ben Dunn

Download or read book Frontiers in Protein and Peptide Sciences written by Ben Dunn and published by Bentham Science Publishers. This book was released on 2014-07-28 with total page 311 pages. Available in PDF, EPUB and Kindle. Book excerpt: Frontiers in Protein and Peptide Sciences is a book series focused on leading-edge research on the structure, physical properties, and functions of proteins and peptides. Authors of contributions in this series have updated their work with new experimental data and references following their initial research. Each volume highlights a number of important topics in current research in the field of protein and peptide chemistry and molecular biology, including membrane proteins and their interactions with ligands, computational methods, and proteins in disease and biotechnology. The series is essential reading for protein chemists and researchers seeking the latest information about protein and peptide research.

Peptide and Protein Design for Biopharmaceutical Applications

Author : Knud Jensen
Publisher : John Wiley & Sons
ISBN 13 : 9780470749715
Total Pages : 306 pages
Book Rating : 4.7/5 (497 download)

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Book Synopsis Peptide and Protein Design for Biopharmaceutical Applications by : Knud Jensen

Download or read book Peptide and Protein Design for Biopharmaceutical Applications written by Knud Jensen and published by John Wiley & Sons. This book was released on 2009-09-01 with total page 306 pages. Available in PDF, EPUB and Kindle. Book excerpt: Peptides serve as effective drugs in the clinic today. However the inherent drawbacks of peptide structures can limit their efficacy as drugs. To overcome this researchers are developing new methods to create ‘tailor-made’ peptides and proteins with improved pharmacological properties. Design of Peptides and Proteins provides an overview of the experimental and computational methods for peptide and protein design, with an emphasis on specific applications for therapeutics and biomedical research. Topics covered include: Computer modeling of peptides and proteins Peptidomimetics Design and synthesis of cyclic peptides Carbohydrates in peptide and protein design De novo design of peptides and proteins Medical development applications An extended case study – the design of insulin variants Design of Peptides and Proteins presents the state-of-the-art of this exciting approach for therapeutics, with contributions from international experts. It is an essential resource for academic and industrial scientists in the fields of peptide and protein drug design, biomedicine, biochemistry, biophysics, molecular modelling, synthetic organic chemistry and medicinal/pharmaceutical chemistry.

Advances in Computational Biology

Author : H.O. Villar
Publisher : Elsevier
ISBN 13 : 9780080526119
Total Pages : 267 pages
Book Rating : 4.5/5 (261 download)

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Book Synopsis Advances in Computational Biology by : H.O. Villar

Download or read book Advances in Computational Biology written by H.O. Villar and published by Elsevier. This book was released on 1996-05-31 with total page 267 pages. Available in PDF, EPUB and Kindle. Book excerpt: The second volume in a series which aims to focus on advances in computational biology. This volume discusses such topics as: statistical analysis of protein sequences; progress in large-scale sequence analysis; and the architecture of loops in proteins.

Introduction to Peptide Science

Author : Ian W. Hamley
Publisher : John Wiley & Sons
ISBN 13 : 1119698170
Total Pages : 235 pages
Book Rating : 4.1/5 (196 download)

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Book Synopsis Introduction to Peptide Science by : Ian W. Hamley

Download or read book Introduction to Peptide Science written by Ian W. Hamley and published by John Wiley & Sons. This book was released on 2020-08-24 with total page 235 pages. Available in PDF, EPUB and Kindle. Book excerpt: Provides an interdisciplinary introduction to peptide science, covering their properties and synthesis, as well as many contemporary applications Peptides are biomolecules comprised of amino acids which play an important role in modulating many physiological processes in our body. This book presents an interdisciplinary approach and general introduction to peptide science, covering contemporary topics including their applicability in therapeutics, peptide hormones, amyloid structures, self-assembled structures, hydrogels, and peptide conjugates including lipopeptides and polymer-peptide conjugates. In addition, it discusses basic properties and synthesis clearly and concisely. Taking a logical approach to the subject, Introduction to Peptide Science gives readers the fundamental knowledge that is required to understand the cutting-edge material which comes later in the book. It offers readers in-depth chapter coverage of the basic properties of peptides; synthesis; amyloid and peptide aggregate structures; antimicrobial peptides and cell-penetrating peptides; and peptide therapeutics and peptide hormones. Introduces readers to peptide science, including synthesis and properties Provides unique content covering properties, synthesis, self-assembly, aggregation, and applications Summarizes contemporary topics in an accessible fashion including applications in therapeutics, peptide hormones, amyloid structures, self-assembled structures, hydrogels, and peptide conjugates including lipopeptides Presented at an introductory level for the benefit of students and researchers who are new to the subject Introduction to Peptide Science is an ideal text for undergraduate students of chemistry, biochemistry, and other related biological subjects, and will be a valuable resource for postgraduate students and researchers involved in peptide science and its applications.

Peptides Frontiers of Peptide Science

Author : James P. Tam
Publisher : Springer Science & Business Media
ISBN 13 : 0792351606
Total Pages : 913 pages
Book Rating : 4.7/5 (923 download)

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Book Synopsis Peptides Frontiers of Peptide Science by : James P. Tam

Download or read book Peptides Frontiers of Peptide Science written by James P. Tam and published by Springer Science & Business Media. This book was released on 1999-02-28 with total page 913 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume contains the Proceedings of the Fifteenth American Peptide Symposium (15APS) held in Nashville, Tennessee, on June 14-19, 1997. This biennial meeting was jointly sponsored by the American Peptide Society and Vanderbilt University. The American Peptide Symposium is the most important international peptide meeting, and attracts the largest number of attendees and attention. The attendance of 1081 participants from 37 countries was lower than the two previous Symposia. However, the number of participating countries was the largest. Thus, it was gratifying to see that this meeting retained both its international flavor and participant loyalty at a time when there are many more symposia held each year on similar subjects. The scientific program comprised 124 oral and 550 poster presentations. The oral presentations together with selected poster presentations are included in this proceedings volume. Together they constitute the most up-to-date advances in peptide science.

Peptides Targeting Protein-Protein Interactions: Methods and Applications

Author : Luca Domenico D’Andrea
Publisher : Frontiers Media SA
ISBN 13 : 2889718204
Total Pages : 135 pages
Book Rating : 4.8/5 (897 download)

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Book Synopsis Peptides Targeting Protein-Protein Interactions: Methods and Applications by : Luca Domenico D’Andrea

Download or read book Peptides Targeting Protein-Protein Interactions: Methods and Applications written by Luca Domenico D’Andrea and published by Frontiers Media SA. This book was released on 2021-12-06 with total page 135 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Peptides for Youth

Author : Susan Valle
Publisher : Springer Science & Business Media
ISBN 13 : 0387736573
Total Pages : 703 pages
Book Rating : 4.3/5 (877 download)

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Book Synopsis Peptides for Youth by : Susan Valle

Download or read book Peptides for Youth written by Susan Valle and published by Springer Science & Business Media. This book was released on 2009-06-23 with total page 703 pages. Available in PDF, EPUB and Kindle. Book excerpt: The American Peptide Society (APS) provides a forum for advancing and promoting knowledge of the chemistry and biology of peptides. The approximately one thousand members of the Society come from North America and from more than thirty other countries throughout the world. Establishment of the APS was a result of the rapid worldwide growth that has occurred in peptide-related research, and of the increasing interaction of peptide scientists with virtually all fields of science. Peptides for Youth: The Proceedings of the the 20th American Peptide Symposium will highlight many of the recent developments in peptide science, with a particular emphasis on how these advances are being applied to basic problems in biology and medicine. The 20th American Peptide Symposium will take place June 26 - 30, 2007 in Montreal, Canada.

Peptide and Peptidomimetic Therapeutics

Author : Nir Qvit
Publisher : Academic Press
ISBN 13 : 0128204478
Total Pages : 792 pages
Book Rating : 4.1/5 (282 download)

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Book Synopsis Peptide and Peptidomimetic Therapeutics by : Nir Qvit

Download or read book Peptide and Peptidomimetic Therapeutics written by Nir Qvit and published by Academic Press. This book was released on 2022-09-22 with total page 792 pages. Available in PDF, EPUB and Kindle. Book excerpt: Peptide and Peptidomimetic Therapeutics: From Bench to Beside offers applied, evidence-based instruction on developing and applying peptide therapeutics in disease treatment, driving drug discovery, and improving patient care. Here, researchers, clinicians and students will find tools to harness the full power of peptides and peptidomimetics and improve bioavailability, stability, efficiency and selectivity of new therapeutics and their application in treatment plans. More than 20 leaders in the field share their approaches for identifying and advancing peptide and peptidomimetic therapeutics. Topics examined run from "bench to bedside," beginning with fundamental peptide science, protein-protein interactions and peptide synthesis. Later chapters examine modes for peptide drug delivery, including cell penetration peptide and peptidomimetic delivery, as well as the targeting of specific disease types, peptide therapeutics as applied to infectious disease, cancer, metabolic disorders, neurodegenerative disorders, and skin disorders, and antiparasitic and immunosuppressive peptidomimetics. Helps researchers and clinicians harness the full of power of peptides and peptidomimetics in their daily work and drug discovery Features chapters running from “bench to bedside , providing a thorough grounding in fundamental peptide science, drug delivery methods, and targeting of specific disease types Features chapter contributions from international leaders in peptide science and drug development

Modeling Peptide-Protein Interactions

Author : Ora Schueler-Furman
Publisher : Humana
ISBN 13 : 9781493967964
Total Pages : 0 pages
Book Rating : 4.9/5 (679 download)

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Book Synopsis Modeling Peptide-Protein Interactions by : Ora Schueler-Furman

Download or read book Modeling Peptide-Protein Interactions written by Ora Schueler-Furman and published by Humana. This book was released on 2017-02-27 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume covers an array of techniques available for studying peptide-protein docking and design. The book is divided into four sections: peptide binding site prediction; peptide-protein docking; prediction and design of peptide binding specificity; and the design of inhibitory peptides. The chapters in Modeling Peptide-Protein Interactions: Methods and Protocols cover topics such as the usage of ACCLUSTER and PeptiMap for peptide binding site prediction; AnchorDock and ATTRACT for blind, flexible docking of peptides to proteins; flexible peptide docking using HADDOCK and FlexPepDock; identifying loop-mediated protein-protein interactions using LoopFinder; and protein-peptide interaction design using PinaColada. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary details for successful application of the different approaches and step-by-step, readily reproducible protocols, as well as tips on troubleshooting and avoiding known pitfalls. Cutting-edge and thorough, Modeling Peptide-Protein Interactions: Methods and Protocols provides a diverse and unified overview of this rapidly advancing field of major interest and applicability.

Protein and Peptide Folding, Misfolding, and Non-Folding

Author : Reinhard Schweitzer-Stenner
Publisher : John Wiley & Sons
ISBN 13 : 1118183355
Total Pages : 484 pages
Book Rating : 4.1/5 (181 download)

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Book Synopsis Protein and Peptide Folding, Misfolding, and Non-Folding by : Reinhard Schweitzer-Stenner

Download or read book Protein and Peptide Folding, Misfolding, and Non-Folding written by Reinhard Schweitzer-Stenner and published by John Wiley & Sons. This book was released on 2012-02-08 with total page 484 pages. Available in PDF, EPUB and Kindle. Book excerpt: Sheds new light on intrinsically disordered proteins and peptides, including their role in neurodegenerative diseases With the discovery of intrinsically disordered proteins and peptides (IDPs), researchers realized that proteins do not necessarily adopt a well defined secondary and tertiary structure in order to perform biological functions. In fact, IDPs play biologically relevant roles, acting as inhibitors, scavengers, and even facilitating DNA/RNA-protein interactions. Due to their propensity for self-aggregation and fibril formation, some IDPs are involved in neurodegenerative diseases such as Parkinson's and Alzheimer's. With contributions from leading researchers, this text reviews the most recent studies, encapsulating our understanding of IDPs. The authors explain how the growing body of IDP research is building our knowledge of the folding process, the binding of ligands to receptor molecules, and peptide self-aggregation. Readers will discover a variety of experimental, theoretical, and computational approaches used to better understand the properties and function of IDPs. Moreover, they'll discover the role of IDPs in human disease and as drug targets. Protein and Peptide Folding, Misfolding, and Non-Folding begins with an introduction that explains why research on IDPs has significantly expanded in the past few years. Next, the book is divided into three sections: Conformational Analysis of Unfolded States Disordered Peptides and Molecular Recognition Aggregation of Disordered Peptides Throughout the book, detailed figures help readers understand the structure, properties, and function of IDPs. References at the end of each chapter serve as a gateway to the growing body of literature in the field. With the publication of Protein and Peptide Folding, Misfolding, and Non-Folding, researchers now have a single place to discover IDPs, their diverse biological functions, and the many disciplines that have contributed to our evolving understanding of them.

Peptide Therapeutics

Author : Seetharama D. Jois
Publisher : Springer Nature
ISBN 13 : 3031045440
Total Pages : 321 pages
Book Rating : 4.0/5 (31 download)

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Book Synopsis Peptide Therapeutics by : Seetharama D. Jois

Download or read book Peptide Therapeutics written by Seetharama D. Jois and published by Springer Nature. This book was released on 2022-09-26 with total page 321 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book explains how peptide-based drug design works, what steps are needed to develop a peptide-based therapeutic, and challenges in synthesis as well as regulatory issues. It covers the design concept of peptide therapeutics from fundamental principles using structural biology and computational approaches. The chapters are arranged in a linear fashion. A fresh graduate or a scientist who works on small molecules can use this to follow the design and development of peptide therapeutics to use as understanding the basic concepts. Each chapter is written by experts from academia as well as industry. Rather than covering extensive literature, the book provides concepts of design, synthesis, delivery, as well as regulatory affairs and manufacturing of peptides in a systematic way with examples in each case. The book can be used as a reference for a pharmaceutical or biomedical scientist or graduate student who wants to pursue their career in peptide therapeutics. Some chapters will be written as a combination of basic principles and protocol so that scientists can adopt these methods to their research work. The examples provided can be used to perform peptide formulation considerations for the designed peptides. The book has nine chapters, and each chapter can be read as an independent unit on a particular concept.

Computer Simulations of Aggregation of Proteins and Peptides

Author : Mai Suan Li
Publisher : Humana
ISBN 13 : 9781071615485
Total Pages : 0 pages
Book Rating : 4.6/5 (154 download)

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Book Synopsis Computer Simulations of Aggregation of Proteins and Peptides by : Mai Suan Li

Download or read book Computer Simulations of Aggregation of Proteins and Peptides written by Mai Suan Li and published by Humana. This book was released on 2023-03-02 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume provides computational methods and reviews various aspects of computational studies of protein aggregation. Chapters discuss the relationship between protein misfolding and protein aggregation, methods of prediction of aggregation propensities of protein, peptides, protein structure, results of computer simulations of aggregation, and computational simulations focused on specific diseases such as Alzheimer’s, Parkinson’s, and preeclampsia. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Computer Simulations of Aggregation of Proteins and Peptides aims to ensure successful results in the further study of this vital field.

Issues in Proteins and Peptides Research and Application: 2012 Edition

Author :
Publisher : ScholarlyEditions
ISBN 13 : 1481646605
Total Pages : 234 pages
Book Rating : 4.4/5 (816 download)

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Book Synopsis Issues in Proteins and Peptides Research and Application: 2012 Edition by :

Download or read book Issues in Proteins and Peptides Research and Application: 2012 Edition written by and published by ScholarlyEditions. This book was released on 2013-01-10 with total page 234 pages. Available in PDF, EPUB and Kindle. Book excerpt: Issues in Proteins and Peptides Research and Application: 2012 Edition is a ScholarlyEditions™ eBook that delivers timely, authoritative, and comprehensive information about Protein Science. The editors have built Issues in Proteins and Peptides Research and Application: 2012 Edition on the vast information databases of ScholarlyNews.™ You can expect the information about Protein Science in this eBook to be deeper than what you can access anywhere else, as well as consistently reliable, authoritative, informed, and relevant. The content of Issues in Proteins and Peptides Research and Application: 2012 Edition has been produced by the world’s leading scientists, engineers, analysts, research institutions, and companies. All of the content is from peer-reviewed sources, and all of it is written, assembled, and edited by the editors at ScholarlyEditions™ and available exclusively from us. You now have a source you can cite with authority, confidence, and credibility. More information is available at http://www.ScholarlyEditions.com/.