Case Studies In Neural Data Analysis

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Case Studies in Neural Data Analysis

Author : Mark A. Kramer
Publisher : MIT Press
ISBN 13 : 026233674X
Total Pages : 385 pages
Book Rating : 4.2/5 (623 download)

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Book Synopsis Case Studies in Neural Data Analysis by : Mark A. Kramer

Download or read book Case Studies in Neural Data Analysis written by Mark A. Kramer and published by MIT Press. This book was released on 2016-10-28 with total page 385 pages. Available in PDF, EPUB and Kindle. Book excerpt: A practical guide to neural data analysis techniques that presents sample datasets and hands-on methods for analyzing the data. As neural data becomes increasingly complex, neuroscientists now require skills in computer programming, statistics, and data analysis. This book teaches practical neural data analysis techniques by presenting example datasets and developing techniques and tools for analyzing them. Each chapter begins with a specific example of neural data, which motivates mathematical and statistical analysis methods that are then applied to the data. This practical, hands-on approach is unique among data analysis textbooks and guides, and equips the reader with the tools necessary for real-world neural data analysis. The book begins with an introduction to MATLAB, the most common programming platform in neuroscience, which is used in the book. (Readers familiar with MATLAB can skip this chapter and might decide to focus on data type or method type.) The book goes on to cover neural field data and spike train data, spectral analysis, generalized linear models, coherence, and cross-frequency coupling. Each chapter offers a stand-alone case study that can be used separately as part of a targeted investigation. The book includes some mathematical discussion but does not focus on mathematical or statistical theory, emphasizing the practical instead. References are included for readers who want to explore the theoretical more deeply. The data and accompanying MATLAB code are freely available on the authors' website. The book can be used for upper-level undergraduate or graduate courses or as a professional reference.

Analysis of Neural Data

Author : Robert E. Kass
Publisher : Springer
ISBN 13 : 1461496020
Total Pages : 663 pages
Book Rating : 4.4/5 (614 download)

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Book Synopsis Analysis of Neural Data by : Robert E. Kass

Download or read book Analysis of Neural Data written by Robert E. Kass and published by Springer. This book was released on 2014-07-08 with total page 663 pages. Available in PDF, EPUB and Kindle. Book excerpt: Continual improvements in data collection and processing have had a huge impact on brain research, producing data sets that are often large and complicated. By emphasizing a few fundamental principles, and a handful of ubiquitous techniques, Analysis of Neural Data provides a unified treatment of analytical methods that have become essential for contemporary researchers. Throughout the book ideas are illustrated with more than 100 examples drawn from the literature, ranging from electrophysiology, to neuroimaging, to behavior. By demonstrating the commonality among various statistical approaches the authors provide the crucial tools for gaining knowledge from diverse types of data. Aimed at experimentalists with only high-school level mathematics, as well as computationally-oriented neuroscientists who have limited familiarity with statistics, Analysis of Neural Data serves as both a self-contained introduction and a reference work.

Case Studies in Neural Data Analysis

Author : Mark A. Kramer
Publisher : MIT Press
ISBN 13 : 0262529378
Total Pages : 385 pages
Book Rating : 4.2/5 (625 download)

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Book Synopsis Case Studies in Neural Data Analysis by : Mark A. Kramer

Download or read book Case Studies in Neural Data Analysis written by Mark A. Kramer and published by MIT Press. This book was released on 2016-11-04 with total page 385 pages. Available in PDF, EPUB and Kindle. Book excerpt: A practical guide to neural data analysis techniques that presents sample datasets and hands-on methods for analyzing the data. As neural data becomes increasingly complex, neuroscientists now require skills in computer programming, statistics, and data analysis. This book teaches practical neural data analysis techniques by presenting example datasets and developing techniques and tools for analyzing them. Each chapter begins with a specific example of neural data, which motivates mathematical and statistical analysis methods that are then applied to the data. This practical, hands-on approach is unique among data analysis textbooks and guides, and equips the reader with the tools necessary for real-world neural data analysis. The book begins with an introduction to MATLAB, the most common programming platform in neuroscience, which is used in the book. (Readers familiar with MATLAB can skip this chapter and might decide to focus on data type or method type.) The book goes on to cover neural field data and spike train data, spectral analysis, generalized linear models, coherence, and cross-frequency coupling. Each chapter offers a stand-alone case study that can be used separately as part of a targeted investigation. The book includes some mathematical discussion but does not focus on mathematical or statistical theory, emphasizing the practical instead. References are included for readers who want to explore the theoretical more deeply. The data and accompanying MATLAB code are freely available on the authors' website. The book can be used for upper-level undergraduate or graduate courses or as a professional reference. A version of this textbook with all of the examples in Python is available on the MIT Press website.

Data-Driven Computational Neuroscience

Author : Concha Bielza
Publisher : Cambridge University Press
ISBN 13 : 110849370X
Total Pages : 709 pages
Book Rating : 4.1/5 (84 download)

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Book Synopsis Data-Driven Computational Neuroscience by : Concha Bielza

Download or read book Data-Driven Computational Neuroscience written by Concha Bielza and published by Cambridge University Press. This book was released on 2020-11-26 with total page 709 pages. Available in PDF, EPUB and Kindle. Book excerpt: Trains researchers and graduate students in state-of-the-art statistical and machine learning methods to build models with real-world data.

Neural Data Science

Author : Erik Lee Nylen
Publisher : Academic Press
ISBN 13 : 012804098X
Total Pages : 370 pages
Book Rating : 4.1/5 (28 download)

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Book Synopsis Neural Data Science by : Erik Lee Nylen

Download or read book Neural Data Science written by Erik Lee Nylen and published by Academic Press. This book was released on 2017-02-24 with total page 370 pages. Available in PDF, EPUB and Kindle. Book excerpt: A Primer with MATLAB® and PythonTM present important information on the emergence of the use of Python, a more general purpose option to MATLAB, the preferred computation language for scientific computing and analysis in neuroscience. This book addresses the snake in the room by providing a beginner’s introduction to the principles of computation and data analysis in neuroscience, using both Python and MATLAB, giving readers the ability to transcend platform tribalism and enable coding versatility. Includes discussions of both MATLAB and Python in parallel Introduces the canonical data analysis cascade, standardizing the data analysis flow Presents tactics that strategically, tactically, and algorithmically help improve the organization of code

Applied Deep Learning

Author : Umberto Michelucci
Publisher : Apress
ISBN 13 : 1484237900
Total Pages : 425 pages
Book Rating : 4.4/5 (842 download)

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Book Synopsis Applied Deep Learning by : Umberto Michelucci

Download or read book Applied Deep Learning written by Umberto Michelucci and published by Apress. This book was released on 2018-09-07 with total page 425 pages. Available in PDF, EPUB and Kindle. Book excerpt: Work with advanced topics in deep learning, such as optimization algorithms, hyper-parameter tuning, dropout, and error analysis as well as strategies to address typical problems encountered when training deep neural networks. You’ll begin by studying the activation functions mostly with a single neuron (ReLu, sigmoid, and Swish), seeing how to perform linear and logistic regression using TensorFlow, and choosing the right cost function. The next section talks about more complicated neural network architectures with several layers and neurons and explores the problem of random initialization of weights. An entire chapter is dedicated to a complete overview of neural network error analysis, giving examples of solving problems originating from variance, bias, overfitting, and datasets coming from different distributions. Applied Deep Learning also discusses how to implement logistic regression completely from scratch without using any Python library except NumPy, to let you appreciate how libraries such as TensorFlow allow quick and efficient experiments. Case studies for each method are included to put into practice all theoretical information. You’ll discover tips and tricks for writing optimized Python code (for example vectorizing loops with NumPy). What You Will Learn Implement advanced techniques in the right way in Python and TensorFlow Debug and optimize advanced methods (such as dropout and regularization) Carry out error analysis (to realize if one has a bias problem, a variance problem, a data offset problem, and so on) Set up a machine learning project focused on deep learning on a complex dataset Who This Book Is For Readers with a medium understanding of machine learning, linear algebra, calculus, and basic Python programming.

Humanities Data Analysis

Author : Folgert Karsdorp
Publisher : Princeton University Press
ISBN 13 : 0691172366
Total Pages : 352 pages
Book Rating : 4.6/5 (911 download)

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Book Synopsis Humanities Data Analysis by : Folgert Karsdorp

Download or read book Humanities Data Analysis written by Folgert Karsdorp and published by Princeton University Press. This book was released on 2021-01-12 with total page 352 pages. Available in PDF, EPUB and Kindle. Book excerpt: A practical guide to data-intensive humanities research using the Python programming language The use of quantitative methods in the humanities and related social sciences has increased considerably in recent years, allowing researchers to discover patterns in a vast range of source materials. Despite this growth, there are few resources addressed to students and scholars who wish to take advantage of these powerful tools. Humanities Data Analysis offers the first intermediate-level guide to quantitative data analysis for humanities students and scholars using the Python programming language. This practical textbook, which assumes a basic knowledge of Python, teaches readers the necessary skills for conducting humanities research in the rapidly developing digital environment. The book begins with an overview of the place of data science in the humanities, and proceeds to cover data carpentry: the essential techniques for gathering, cleaning, representing, and transforming textual and tabular data. Then, drawing from real-world, publicly available data sets that cover a variety of scholarly domains, the book delves into detailed case studies. Focusing on textual data analysis, the authors explore such diverse topics as network analysis, genre theory, onomastics, literacy, author attribution, mapping, stylometry, topic modeling, and time series analysis. Exercises and resources for further reading are provided at the end of each chapter. An ideal resource for humanities students and scholars aiming to take their Python skills to the next level, Humanities Data Analysis illustrates the benefits that quantitative methods can bring to complex research questions. Appropriate for advanced undergraduates, graduate students, and scholars with a basic knowledge of Python Applicable to many humanities disciplines, including history, literature, and sociology Offers real-world case studies using publicly available data sets Provides exercises at the end of each chapter for students to test acquired skills Emphasizes visual storytelling via data visualizations

Calling Bullshit

Author : Carl T. Bergstrom
Publisher : Random House Trade Paperbacks
ISBN 13 : 0525509208
Total Pages : 338 pages
Book Rating : 4.5/5 (255 download)

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Book Synopsis Calling Bullshit by : Carl T. Bergstrom

Download or read book Calling Bullshit written by Carl T. Bergstrom and published by Random House Trade Paperbacks. This book was released on 2021-04-20 with total page 338 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bullshit isn’t what it used to be. Now, two science professors give us the tools to dismantle misinformation and think clearly in a world of fake news and bad data. “A modern classic . . . a straight-talking survival guide to the mean streets of a dying democracy and a global pandemic.”—Wired Misinformation, disinformation, and fake news abound and it’s increasingly difficult to know what’s true. Our media environment has become hyperpartisan. Science is conducted by press release. Startup culture elevates bullshit to high art. We are fairly well equipped to spot the sort of old-school bullshit that is based in fancy rhetoric and weasel words, but most of us don’t feel qualified to challenge the avalanche of new-school bullshit presented in the language of math, science, or statistics. In Calling Bullshit, Professors Carl Bergstrom and Jevin West give us a set of powerful tools to cut through the most intimidating data. You don’t need a lot of technical expertise to call out problems with data. Are the numbers or results too good or too dramatic to be true? Is the claim comparing like with like? Is it confirming your personal bias? Drawing on a deep well of expertise in statistics and computational biology, Bergstrom and West exuberantly unpack examples of selection bias and muddled data visualization, distinguish between correlation and causation, and examine the susceptibility of science to modern bullshit. We have always needed people who call bullshit when necessary, whether within a circle of friends, a community of scholars, or the citizenry of a nation. Now that bullshit has evolved, we need to relearn the art of skepticism.

MATLAB for Neuroscientists

Author : Pascal Wallisch
Publisher : Academic Press
ISBN 13 : 0123838371
Total Pages : 571 pages
Book Rating : 4.1/5 (238 download)

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Book Synopsis MATLAB for Neuroscientists by : Pascal Wallisch

Download or read book MATLAB for Neuroscientists written by Pascal Wallisch and published by Academic Press. This book was released on 2014-01-09 with total page 571 pages. Available in PDF, EPUB and Kindle. Book excerpt: MATLAB for Neuroscientists serves as the only complete study manual and teaching resource for MATLAB, the globally accepted standard for scientific computing, in the neurosciences and psychology. This unique introduction can be used to learn the entire empirical and experimental process (including stimulus generation, experimental control, data collection, data analysis, modeling, and more), and the 2nd Edition continues to ensure that a wide variety of computational problems can be addressed in a single programming environment. This updated edition features additional material on the creation of visual stimuli, advanced psychophysics, analysis of LFP data, choice probabilities, synchrony, and advanced spectral analysis. Users at a variety of levels—advanced undergraduates, beginning graduate students, and researchers looking to modernize their skills—will learn to design and implement their own analytical tools, and gain the fluency required to meet the computational needs of neuroscience practitioners. The first complete volume on MATLAB focusing on neuroscience and psychology applications Problem-based approach with many examples from neuroscience and cognitive psychology using real data Illustrated in full color throughout Careful tutorial approach, by authors who are award-winning educators with strong teaching experience

Environmental Data Analysis with MatLab

Author : William Menke
Publisher : Elsevier
ISBN 13 : 0123918863
Total Pages : 282 pages
Book Rating : 4.1/5 (239 download)

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Book Synopsis Environmental Data Analysis with MatLab by : William Menke

Download or read book Environmental Data Analysis with MatLab written by William Menke and published by Elsevier. This book was released on 2011-09-02 with total page 282 pages. Available in PDF, EPUB and Kindle. Book excerpt: "Environmental Data Analysis with MatLab" is for students and researchers working to analyze real data sets in the environmental sciences. One only has to consider the global warming debate to realize how critically important it is to be able to derive clear conclusions from often-noisy data drawn from a broad range of sources. This book teaches the basics of the underlying theory of data analysis, and then reinforces that knowledge with carefully chosen, realistic scenarios. MatLab, a commercial data processing environment, is used in these scenarios; significant content is devoted to teaching how it can be effectively used in an environmental data analysis setting. The book, though written in a self-contained way, is supplemented with data sets and MatLab scripts that can be used as a data analysis tutorial. It is well written and outlines a clear learning path for researchers and students. It uses real world environmental examples and case studies. It has MatLab software for application in a readily-available software environment. Homework problems help user follow up upon case studies with homework that expands them.

Neuronal Dynamics

Author : Wulfram Gerstner
Publisher : Cambridge University Press
ISBN 13 : 1107060834
Total Pages : 591 pages
Book Rating : 4.1/5 (7 download)

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Book Synopsis Neuronal Dynamics by : Wulfram Gerstner

Download or read book Neuronal Dynamics written by Wulfram Gerstner and published by Cambridge University Press. This book was released on 2014-07-24 with total page 591 pages. Available in PDF, EPUB and Kindle. Book excerpt: This solid introduction uses the principles of physics and the tools of mathematics to approach fundamental questions of neuroscience.

Spikes

Author : Fred Rieke
Publisher : MIT Press (MA)
ISBN 13 : 9780262181747
Total Pages : 418 pages
Book Rating : 4.1/5 (817 download)

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Book Synopsis Spikes by : Fred Rieke

Download or read book Spikes written by Fred Rieke and published by MIT Press (MA). This book was released on 1997 with total page 418 pages. Available in PDF, EPUB and Kindle. Book excerpt: Intended for neurobiologists with an interest in mathematical analysis of neural data as well as the growing number of physicists and mathematicians interested in information processing by "real" nervous systems, Spikes provides a self-contained review of relevant concepts in information theory and statistical decision theory.

Intelligent Data Analysis

Author : Michael R. Berthold
Publisher : Springer
ISBN 13 : 3540486259
Total Pages : 515 pages
Book Rating : 4.5/5 (44 download)

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Book Synopsis Intelligent Data Analysis by : Michael R. Berthold

Download or read book Intelligent Data Analysis written by Michael R. Berthold and published by Springer. This book was released on 2007-06-07 with total page 515 pages. Available in PDF, EPUB and Kindle. Book excerpt: This second and revised edition contains a detailed introduction to the key classes of intelligent data analysis methods. The twelve coherently written chapters by leading experts provide complete coverage of the core issues. The first half of the book is devoted to the discussion of classical statistical issues. The following chapters concentrate on machine learning and artificial intelligence, rule induction methods, neural networks, fuzzy logic, and stochastic search methods. The book concludes with a chapter on visualization and an advanced overview of IDA processes.

Longitudinal Data Analysis

Author : Garrett Fitzmaurice
Publisher : CRC Press
ISBN 13 : 142001157X
Total Pages : 633 pages
Book Rating : 4.4/5 (2 download)

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Book Synopsis Longitudinal Data Analysis by : Garrett Fitzmaurice

Download or read book Longitudinal Data Analysis written by Garrett Fitzmaurice and published by CRC Press. This book was released on 2008-08-11 with total page 633 pages. Available in PDF, EPUB and Kindle. Book excerpt: Although many books currently available describe statistical models and methods for analyzing longitudinal data, they do not highlight connections between various research threads in the statistical literature. Responding to this void, Longitudinal Data Analysis provides a clear, comprehensive, and unified overview of state-of-the-art theory

Topological Data Analysis with Applications

Author : Gunnar Carlsson
Publisher : Cambridge University Press
ISBN 13 : 1108838650
Total Pages : 233 pages
Book Rating : 4.1/5 (88 download)

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Book Synopsis Topological Data Analysis with Applications by : Gunnar Carlsson

Download or read book Topological Data Analysis with Applications written by Gunnar Carlsson and published by Cambridge University Press. This book was released on 2021-12-16 with total page 233 pages. Available in PDF, EPUB and Kindle. Book excerpt: This timely text introduces topological data analysis from scratch, with detailed case studies.

Bayesian Data Analysis, Third Edition

Author : Andrew Gelman
Publisher : CRC Press
ISBN 13 : 1439840954
Total Pages : 677 pages
Book Rating : 4.4/5 (398 download)

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Book Synopsis Bayesian Data Analysis, Third Edition by : Andrew Gelman

Download or read book Bayesian Data Analysis, Third Edition written by Andrew Gelman and published by CRC Press. This book was released on 2013-11-01 with total page 677 pages. Available in PDF, EPUB and Kindle. Book excerpt: Now in its third edition, this classic book is widely considered the leading text on Bayesian methods, lauded for its accessible, practical approach to analyzing data and solving research problems. Bayesian Data Analysis, Third Edition continues to take an applied approach to analysis using up-to-date Bayesian methods. The authors—all leaders in the statistics community—introduce basic concepts from a data-analytic perspective before presenting advanced methods. Throughout the text, numerous worked examples drawn from real applications and research emphasize the use of Bayesian inference in practice. New to the Third Edition Four new chapters on nonparametric modeling Coverage of weakly informative priors and boundary-avoiding priors Updated discussion of cross-validation and predictive information criteria Improved convergence monitoring and effective sample size calculations for iterative simulation Presentations of Hamiltonian Monte Carlo, variational Bayes, and expectation propagation New and revised software code The book can be used in three different ways. For undergraduate students, it introduces Bayesian inference starting from first principles. For graduate students, the text presents effective current approaches to Bayesian modeling and computation in statistics and related fields. For researchers, it provides an assortment of Bayesian methods in applied statistics. Additional materials, including data sets used in the examples, solutions to selected exercises, and software instructions, are available on the book’s web page.

Data-Driven Science and Engineering

Author : Steven L. Brunton
Publisher : Cambridge University Press
ISBN 13 : 1009098489
Total Pages : 615 pages
Book Rating : 4.0/5 (9 download)

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Book Synopsis Data-Driven Science and Engineering by : Steven L. Brunton

Download or read book Data-Driven Science and Engineering written by Steven L. Brunton and published by Cambridge University Press. This book was released on 2022-05-05 with total page 615 pages. Available in PDF, EPUB and Kindle. Book excerpt: A textbook covering data-science and machine learning methods for modelling and control in engineering and science, with Python and MATLAB®.