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Biology In Time And Space A Partial Differential Equation Modeling Approach
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Book Synopsis Biology in Time and Space: A Partial Differential Equation Modeling Approach by : James P. Keener
Download or read book Biology in Time and Space: A Partial Differential Equation Modeling Approach written by James P. Keener and published by American Mathematical Soc.. This book was released on 2021-06-02 with total page 308 pages. Available in PDF, EPUB and Kindle. Book excerpt: How do biological objects communicate, make structures, make measurements and decisions, search for food, i.e., do all the things necessary for survival? Designed for an advanced undergraduate audience, this book uses mathematics to begin to tell that story. It builds on a background in multivariable calculus, ordinary differential equations, and basic stochastic processes and uses partial differential equations as the framework within which to explore these questions.
Book Synopsis Methods of Small Parameter in Mathematical Biology by : Jacek Banasiak
Download or read book Methods of Small Parameter in Mathematical Biology written by Jacek Banasiak and published by Springer Science & Business. This book was released on 2014-04-19 with total page 285 pages. Available in PDF, EPUB and Kindle. Book excerpt: This monograph presents new tools for modeling multiscale biological processes. Natural processes are usually driven by mechanisms widely differing from each other in the time or space scale at which they operate and thus should be described by appropriate multiscale models. However, looking at all such scales simultaneously is often infeasible, costly, and provides information that is redundant for a particular application. Hence, there has been a growing interest in providing a more focused description of multiscale processes by aggregating variables in a way that is relevant to the purpose at hand and preserves the salient features of the dynamics. Many ad hoc methods have been devised, and the aim of this book is to present a systematic way of deriving the so-called limit equations for such aggregated variables and ensuring that the coefficients of these equations encapsulate the relevant information from the discarded levels of description. Since any approximation is only valid if an estimate of the incurred error is available, the tools the authors describe allow for proving that the solutions to the original multiscale family of equations converge to the solution of the limit equation if the relevant parameter converges to its critical value. The chapters are arranged according to the mathematical complexity of the analysis, from systems of ordinary linear differential equations, through nonlinear ordinary differential equations, to linear and nonlinear partial differential equations. Many chapters begin with a survey of mathematical techniques needed for the analysis. All problems discussed in this book belong to the class of singularly perturbed problems; that is, problems in which the structure of the limit equation is significantly different from that of the multiscale model. Such problems appear in all areas of science and can be attacked using many techniques. Methods of Small Parameter in Mathematical Biology will appeal to senior undergraduate and graduate students in applied and biomathematics, as well as researchers specializing in differential equations and asymptotic analysis.
Book Synopsis Methods and Models in Mathematical Biology by : Johannes Müller
Download or read book Methods and Models in Mathematical Biology written by Johannes Müller and published by Springer. This book was released on 2015-08-13 with total page 711 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book developed from classes in mathematical biology taught by the authors over several years at the Technische Universität München. The main themes are modeling principles, mathematical principles for the analysis of these models and model-based analysis of data. The key topics of modern biomathematics are covered: ecology, epidemiology, biochemistry, regulatory networks, neuronal networks and population genetics. A variety of mathematical methods are introduced, ranging from ordinary and partial differential equations to stochastic graph theory and branching processes. A special emphasis is placed on the interplay between stochastic and deterministic models.
Book Synopsis Modeling and Differential Equations in Biology by : T. A. Burton
Download or read book Modeling and Differential Equations in Biology written by T. A. Burton and published by Routledge. This book was released on 2017-10-05 with total page 292 pages. Available in PDF, EPUB and Kindle. Book excerpt: First published in 1980. CRC Press is an imprint of Taylor & Francis.
Book Synopsis Differential Equations with Applications in Biology, Physics, and Engineering by : Jerome A. Goldstein
Download or read book Differential Equations with Applications in Biology, Physics, and Engineering written by Jerome A. Goldstein and published by Routledge. This book was released on 2017-10-05 with total page 353 pages. Available in PDF, EPUB and Kindle. Book excerpt: Suitable as a textbook for a graduate seminar in mathematical modelling, and as a resource for scientists in a wide range of disciplines. Presents 22 lectures from an international conference in Leibnitz, Austria (no date mentioned), explaining recent developments and results in differential equatio
Book Synopsis Mathematical Modeling in Biology by : Shandelle M. Henson
Download or read book Mathematical Modeling in Biology written by Shandelle M. Henson and published by CRC Press. This book was released on 2022-12-29 with total page 285 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mathematical Modeling in Biology: A Research Methods Approach is a textbook written primarily for advanced mathematics and science undergraduate students and graduate-level biology students. Although the applications center on ecology, the expertise of the authors, the methodology can be imported to any other science, including social science and economics. The aim of the book, beyond being a useful aid to teaching and learning the core modeling skills needed for mathematical biology, is to encourage students to think deeply and clearly about the meaning of mathematics in science and to learn significant research methods. Most importantly, it is hoped that students will experience some of the excitement of doing research. Features Minimal pre-requisites beyond a solid background in calculus, such as a calculus I course. Suitable for upper division mathematics and sciences students and graduate-level biology students. Provides sample MATLAB codes and instruction in Appendices along with datasets available on https://bit.ly/3fcLF3D
Book Synopsis Non-Local Partial Differential Equations for Engineering and Biology by : Nikos I. Kavallaris
Download or read book Non-Local Partial Differential Equations for Engineering and Biology written by Nikos I. Kavallaris and published by Springer. This book was released on 2017-11-28 with total page 300 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents new developments in non-local mathematical modeling and mathematical analysis on the behavior of solutions with novel technical tools. Theoretical backgrounds in mechanics, thermo-dynamics, game theory, and theoretical biology are examined in details. It starts off with a review and summary of the basic ideas of mathematical modeling frequently used in the sciences and engineering. The authors then employ a number of models in bio-science and material science to demonstrate applications, and provide recent advanced studies, both on deterministic non-local partial differential equations and on some of their stochastic counterparts used in engineering. Mathematical models applied in engineering, chemistry, and biology are subject to conservation laws. For instance, decrease or increase in thermodynamic quantities and non-local partial differential equations, associated with the conserved physical quantities as parameters. These present novel mathematical objects are engaged with rich mathematical structures, in accordance with the interactions between species or individuals, self-organization, pattern formation, hysteresis. These models are based on various laws of physics, such as mechanics of continuum, electro-magnetic theory, and thermodynamics. This is why many areas of mathematics, calculus of variation, dynamical systems, integrable systems, blow-up analysis, and energy methods are indispensable in understanding and analyzing these phenomena. This book aims for researchers and upper grade students in mathematics, engineering, physics, economics, and biology.
Book Synopsis Modeling and Differential Equations in Biology by : T. A. Burton
Download or read book Modeling and Differential Equations in Biology written by T. A. Burton and published by CRC Press. This book was released on 1980-09-01 with total page 300 pages. Available in PDF, EPUB and Kindle. Book excerpt: Persistence in lotka-volterra models of food chains and competition; Mathematical models of humoral immune response; Mathematical models of dose and cell cycle effects in multifraction radiotherapy; Theorical and experimental investigations of microbial competition in continuous culture; A liapunov functional for a class of reaction-diffusion systems; Stochastic prey-predator relationships; Coexistence in predator-prey systems; Stability of some multispecies population models; Population dynamics in patchy environments; Limit cycles in a model of b-cell simulation; Optimal age-specific harvesting policy for a cintinuous time-population model; Models involving differential and integral equations appropriate for describing a temperature dependent predator-prey mite ecosystem on apples.
Book Synopsis Modelling Differential Equations in Biology by : C. H. Taubes
Download or read book Modelling Differential Equations in Biology written by C. H. Taubes and published by Cambridge University Press. This book was released on 2008-01-17 with total page 526 pages. Available in PDF, EPUB and Kindle. Book excerpt: Given that a college level life science student will take only one additional calculus course after learning its very basics, what material should such a course cover? This book answers that question. It is based on a very successful one-semester course taught at Harvard and aims to teach students in the life sciences understanding the use of differential equations. It is enriched with illustrative examples from real papers. Necessary notions from linear algebra and partial differential equations are introduced as and when needed, and in the context of applications. Drawing on a very successful one-semester course at Harvard, this text aims to teach students in the life sciences how to use differential equations. It is enriched with illustrative examples from real papers. Necessary notions from mathematics are introduced as and when needed, and in the context of applications. Aimed at biologists wishing to understand mathematical modelling rather than just learning math methods.
Book Synopsis A Course in Mathematical Biology by : Gerda de Vries
Download or read book A Course in Mathematical Biology written by Gerda de Vries and published by SIAM. This book was released on 2006-07-01 with total page 307 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is the only book that teaches all aspects of modern mathematical modeling and that is specifically designed to introduce undergraduate students to problem solving in the context of biology. Included is an integrated package of theoretical modeling and analysis tools, computational modeling techniques, and parameter estimation and model validation methods, with a focus on integrating analytical and computational tools in the modeling of biological processes. Divided into three parts, it covers basic analytical modeling techniques; introduces computational tools used in the modeling of biological problems; and includes various problems from epidemiology, ecology, and physiology. All chapters include realistic biological examples, including many exercises related to biological questions. In addition, 25 open-ended research projects are provided, suitable for students. An accompanying Web site contains solutions and a tutorial for the implementation of the computational modeling techniques. Calculations can be done in modern computing languages such as Maple, Mathematica, and MATLAB?.
Book Synopsis Exploring Modeling with Data and Differential Equations Using R by : John Zobitz
Download or read book Exploring Modeling with Data and Differential Equations Using R written by John Zobitz and published by CRC Press. This book was released on 2022-11-29 with total page 362 pages. Available in PDF, EPUB and Kindle. Book excerpt: Exploring Modeling with Data and Differential Equations Using R provides a unique introduction to differential equations with applications to the biological and other natural sciences. Additionally, model parameterization and simulation of stochastic differential equations are explored, providing additional tools for model analysis and evaluation. This unified framework sits "at the intersection" of different mathematical subject areas, data science, statistics, and the natural sciences. The text throughout emphasizes data science workflows using the R statistical software program and the tidyverse constellation of packages. Only knowledge of calculus is needed; the text’s integrated framework is a stepping stone for further advanced study in mathematics or as a comprehensive introduction to modeling for quantitative natural scientists. The text will introduce you to: modeling with systems of differential equations and developing analytical, computational, and visual solution techniques. the R programming language, the tidyverse syntax, and developing data science workflows. qualitative techniques to analyze a system of differential equations. data assimilation techniques (simple linear regression, likelihood or cost functions, and Markov Chain, Monte Carlo Parameter Estimation) to parameterize models from data. simulating and evaluating outputs for stochastic differential equation models. An associated R package provides a framework for computation and visualization of results. It can be found here: https://cran.r-project.org/web/packages/demodelr/index.html.
Book Synopsis Dynamical System Models in the Life Sciences and Their Underlying Scientific Issues by : Frederic Y M Wan
Download or read book Dynamical System Models in the Life Sciences and Their Underlying Scientific Issues written by Frederic Y M Wan and published by World Scientific Publishing Company. This book was released on 2017-08-16 with total page 400 pages. Available in PDF, EPUB and Kindle. Book excerpt: Broadly speaking, there are two general approaches to teaching mathematical modeling: 1) the case study approach, and 2) the method based approach (that teaches mathematical techniques with applications to relevant mathematical models). This text emphasizes instead the scientific issues for modeling different phenomena. For the natural or harvested growth of a fish population, we may be interested in the evolution of the population, whether it reaches a steady state (equilibrium or cycle), stable or unstable with respect to a small perturbation from equilibrium, or whether a small change in the environment would cause a catastrophic change, etc. Each scientific issue requires an appropriate model and a different set of mathematical tools to extract information from the model. Models examined are chosen to help explain or justify empirical observations such as cocktail drug treatments are more effective and regenerations after injuries or illness are fast-tracked (compared to original developments). Volume I of this three-volume set limits its scope to phenomena and scientific issues that are modeled by ordinary differential equations (ODE). Scientific issues such as signal and wave propagation, diffusion, and shock formation involving spatial dynamics to be modeled by partial differential equations (PDE) will be treated in Vol. II. Scientific issues involving randomness and uncertainty are examined in Vol. III. Request Inspection Copy Contents: Mathematical Models and the Modeling CycleGrowth of a Population:Evolution and EquilibriumStability and BifurcationInteracting Populations:Linear InteractionsNonlinear Autonomous InteractionsHIV Dynamics and Drug TreatmentsIndex Theory, Bistability and FeedbackOptimization:The Economics of GrowthOptimization over a Planning PeriodModifications of the Basic ProblemBoundary Value Problems are More ComplexConstraints and Control:"Do Your Best" and the Maximum PrincipleChlamydia TrachomatisGenetic Instability and CarcinogenesisMathematical Modeling RevisitedAppendices:First Order ODEBasic Numerical MethodsAssignments Readership: Undergraduates in mathematical biology, mathematical modeling of dynamical systems, optimization and control, viral dynamics (infectious diseases), oncology.
Book Synopsis Differential Equation Analysis in Biomedical Science and Engineering by : William E. Schiesser
Download or read book Differential Equation Analysis in Biomedical Science and Engineering written by William E. Schiesser and published by John Wiley & Sons. This book was released on 2014-03-31 with total page 344 pages. Available in PDF, EPUB and Kindle. Book excerpt: Features a solid foundation of mathematical and computational tools to formulate and solve real-world PDE problems across various fields With a step-by-step approach to solving partial differential equations (PDEs), Differential Equation Analysis in Biomedical Science and Engineering: Partial Differential Equation Applications with R successfully applies computational techniques for solving real-world PDE problems that are found in a variety of fields, including chemistry, physics, biology, and physiology. The book provides readers with the necessary knowledge to reproduce and extend the computed numerical solutions and is a valuable resource for dealing with a broad class of linear and nonlinear partial differential equations. The author’s primary focus is on models expressed as systems of PDEs, which generally result from including spatial effects so that the PDE dependent variables are functions of both space and time, unlike ordinary differential equation (ODE) systems that pertain to time only. As such, the book emphasizes details of the numerical algorithms and how the solutions were computed. Featuring computer-based mathematical models for solving real-world problems in the biological and biomedical sciences and engineering, the book also includes: R routines to facilitate the immediate use of computation for solving differential equation problems without having to first learn the basic concepts of numerical analysis and programming for PDEs Models as systems of PDEs and associated initial and boundary conditions with explanations of the associated chemistry, physics, biology, and physiology Numerical solutions of the presented model equations with a discussion of the important features of the solutions Aspects of general PDE computation through various biomedical science and engineering applications Differential Equation Analysis in Biomedical Science and Engineering: Partial Differential Equation Applications with R is an excellent reference for researchers, scientists, clinicians, medical researchers, engineers, statisticians, epidemiologists, and pharmacokineticists who are interested in both clinical applications and interpretation of experimental data with mathematical models in order to efficiently solve the associated differential equations. The book is also useful as a textbook for graduate-level courses in mathematics, biomedical science and engineering, biology, biophysics, biochemistry, medicine, and engineering.
Book Synopsis Modelling Biological Populations in Space and Time by : Eric Renshaw
Download or read book Modelling Biological Populations in Space and Time written by Eric Renshaw and published by Cambridge University Press. This book was released on 1993-08-26 with total page 428 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume develops a unifying approach to population studies, emphasising the interplay between modelling and experimentation. Throughout, mathematicians and biologists are provided with a framework within which population dynamics can be fully explored and understood. Aspects of population dynamics covered include birth-death and logistic processes, competition and predator-prey relationships, chaos, reaction time-delays, fluctuating environments, spatial systems, velocities of spread, epidemics, and spatial branching structures. Both deterministic and stochastic models are considered. Whilst the more theoretically orientated sections will appeal to mathematical biologists, the material is presented so that readers with little mathematical expertise can bypass these without losing the main flow of the text.
Book Synopsis Differential Equations and Mathematical Biology by : D.S. Jones
Download or read book Differential Equations and Mathematical Biology written by D.S. Jones and published by Chapman and Hall/CRC. This book was released on 2003-02-26 with total page 408 pages. Available in PDF, EPUB and Kindle. Book excerpt: The conjoining of mathematics and biology has brought about significant advances in both areas, with mathematics providing a tool for modelling and understanding biological phenomena and biology stimulating developments in the theory of nonlinear differential equations. The continued application of mathematics to biology holds great promise and in fact may be the applied mathematics of the 21st century. Differential Equations and Mathematical Biology provides a detailed treatment of both ordinary and partial differential equations, techniques for their solution, and their use in a variety of biological applications. The presentation includes the fundamental techniques of nonlinear differential equations, bifurcation theory, and the impact of chaos on discrete time biological modelling. The authors provide generous coverage of numerical techniques and address a range of important applications, including heart physiology, nerve pulse transmission, chemical reactions, tumour growth, and epidemics. This book is the ideal vehicle for introducing the challenges of biology to mathematicians and likewise delivering key mathematical tools to biologists. Carefully designed for such multiple purposes, it serves equally well as a professional reference and as a text for coursework in differential equations, in biological modelling, or in differential equation models of biology for life science students.
Book Synopsis Stochastic Processes, Multiscale Modeling, and Numerical Methods for Computational Cellular Biology by : David Holcman
Download or read book Stochastic Processes, Multiscale Modeling, and Numerical Methods for Computational Cellular Biology written by David Holcman and published by Springer. This book was released on 2017-10-04 with total page 377 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book focuses on the modeling and mathematical analysis of stochastic dynamical systems along with their simulations. The collected chapters will review fundamental and current topics and approaches to dynamical systems in cellular biology. This text aims to develop improved mathematical and computational methods with which to study biological processes. At the scale of a single cell, stochasticity becomes important due to low copy numbers of biological molecules, such as mRNA and proteins that take part in biochemical reactions driving cellular processes. When trying to describe such biological processes, the traditional deterministic models are often inadequate, precisely because of these low copy numbers. This book presents stochastic models, which are necessary to account for small particle numbers and extrinsic noise sources. The complexity of these models depend upon whether the biochemical reactions are diffusion-limited or reaction-limited. In the former case, one needs to adopt the framework of stochastic reaction-diffusion models, while in the latter, one can describe the processes by adopting the framework of Markov jump processes and stochastic differential equations. Stochastic Processes, Multiscale Modeling, and Numerical Methods for Computational Cellular Biology will appeal to graduate students and researchers in the fields of applied mathematics, biophysics, and cellular biology.
Book Synopsis Mathematical Biology by : Avner Friedman
Download or read book Mathematical Biology written by Avner Friedman and published by . This book was released on 2018 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: The fast growing field of mathematical biology addresses biological questions using mathematical models from areas such as dynamical systems, probability, statistics, and discrete mathematics. This book considers models that are described by systems of partial differential equations, and it focuses on modeling, rather than on numerical methods and simulations. The models studied are concerned with population dynamics, cancer, risk of plaque growth associated with high cholesterol, and wound healing. A rich variety of open problems demonstrates the exciting challenges and opportunities for rese.
