Video Bioinformatics

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Video Bioinformatics

Author : Bir Bhanu
Publisher : Springer
ISBN 13 : 3319237241
Total Pages : 381 pages
Book Rating : 4.3/5 (192 download)

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Book Synopsis Video Bioinformatics by : Bir Bhanu

Download or read book Video Bioinformatics written by Bir Bhanu and published by Springer. This book was released on 2015-12-16 with total page 381 pages. Available in PDF, EPUB and Kindle. Book excerpt: The advances of live cell video imaging and high-throughput technologies for functional and chemical genomics provide unprecedented opportunities to understand how biological processes work in subcellularand multicellular systems. The interdisciplinary research field of Video Bioinformatics is defined by BirBhanu as the automated processing, analysis, understanding, data mining, visualization, query-basedretrieval/storage of biological spatiotemporal events/data and knowledge extracted from dynamic imagesand microscopic videos. Video bioinformatics attempts to provide a deeper understanding of continuousand dynamic life processes.Genome sequences alone lack spatial and temporal information, and video imaging of specific moleculesand their spatiotemporal interactions, using a range of imaging methods, are essential to understandhow genomes create cells, how cells constitute organisms, and how errant cells cause disease. The bookexamines interdisciplinary research issues and challenges with examples that deal with organismal dynamics,intercellular and tissue dynamics, intracellular dynamics, protein movement, cell signaling and softwareand databases for video bioinformatics.Topics and Features• Covers a set of biological problems, their significance, live-imaging experiments, theory andcomputational methods, quantifiable experimental results and discussion of results.• Provides automated methods for analyzing mild traumatic brain injury over time, identifying injurydynamics after neonatal hypoxia-ischemia and visualizing cortical tissue changes during seizureactivity as examples of organismal dynamics• Describes techniques for quantifying the dynamics of human embryonic stem cells with examplesof cell detection/segmentation, spreading and other dynamic behaviors which are important forcharacterizing stem cell health• Examines and quantifies dynamic processes in plant and fungal systems such as cell trafficking,growth of pollen tubes in model systems such as Neurospora Crassa and Arabidopsis• Discusses the dynamics of intracellular molecules for DNA repair and the regulation of cofilintransport using video analysis• Discusses software, system and database aspects of video bioinformatics by providing examples of5D cell tracking by FARSIGHT open source toolkit, a survey on available databases and software,biological processes for non-verbal communications and identification and retrieval of moth imagesThis unique text will be of great interest to researchers and graduate students of Electrical Engineering,Computer Science, Bioengineering, Cell Biology, Toxicology, Genetics, Genomics, Bioinformatics, ComputerVision and Pattern Recognition, Medical Image Analysis, and Cell Molecular and Developmental Biology.The large number of example applications will also appeal to application scientists and engineers.Dr. Bir Bhanu is Distinguished Professor of Electrical & C omputer Engineering, Interim Chair of theDepartment of Bioengineering, Cooperative Professor of Computer Science & Engineering, and MechanicalEngineering and the Director of the Center for Research in Intelligent Systems, at the University of California,Riverside, California, USA.Dr. Prue Talbot is Professor of Cell Biology & Neuroscience and Director of the Stem Cell Center and Core atthe University of California Riverside, California, USA.

Regenesis

Author : George M Church
Publisher : Basic Books
ISBN 13 : 0465038654
Total Pages : 305 pages
Book Rating : 4.4/5 (65 download)

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Book Synopsis Regenesis by : George M Church

Download or read book Regenesis written by George M Church and published by Basic Books. This book was released on 2014-04-08 with total page 305 pages. Available in PDF, EPUB and Kindle. Book excerpt: A Harvard biologist and master inventor explores how new biotechnologies will enable us to bring species back from the dead, unlock vast supplies of renewable energy, and extend human life. In Regenesis, George Church and science writer Ed Regis explore the possibilities of the emerging field of synthetic biology. Synthetic biology, in which living organisms are selectively altered by modifying substantial portions of their genomes, allows for the creation of entirely new species of organisms. These technologies-far from the out-of-control nightmare depicted in science fiction-have the power to improve human and animal health, increase our intelligence, enhance our memory, and even extend our life span. A breathtaking look at the potential of this world-changing technology, Regenesis is nothing less than a guide to the future of life.

Python for Bioinformatics

Author : Sebastian Bassi
Publisher : CRC Press
ISBN 13 : 1351976958
Total Pages : 510 pages
Book Rating : 4.3/5 (519 download)

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Book Synopsis Python for Bioinformatics by : Sebastian Bassi

Download or read book Python for Bioinformatics written by Sebastian Bassi and published by CRC Press. This book was released on 2017-08-07 with total page 510 pages. Available in PDF, EPUB and Kindle. Book excerpt: In today's data driven biology, programming knowledge is essential in turning ideas into testable hypothesis. Based on the author’s extensive experience, Python for Bioinformatics, Second Edition helps biologists get to grips with the basics of software development. Requiring no prior knowledge of programming-related concepts, the book focuses on the easy-to-use, yet powerful, Python computer language. This new edition is updated throughout to Python 3 and is designed not just to help scientists master the basics, but to do more in less time and in a reproducible way. New developments added in this edition include NoSQL databases, the Anaconda Python distribution, graphical libraries like Bokeh, and the use of Github for collaborative development.

R Programming for Bioinformatics

Author : Robert Gentleman
Publisher : CRC Press
ISBN 13 : 1420063685
Total Pages : 328 pages
Book Rating : 4.4/5 (2 download)

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Book Synopsis R Programming for Bioinformatics by : Robert Gentleman

Download or read book R Programming for Bioinformatics written by Robert Gentleman and published by CRC Press. This book was released on 2008-07-14 with total page 328 pages. Available in PDF, EPUB and Kindle. Book excerpt: Due to its data handling and modeling capabilities as well as its flexibility, R is becoming the most widely used software in bioinformatics. R Programming for Bioinformatics explores the programming skills needed to use this software tool for the solution of bioinformatics and computational biology problems.Drawing on the author's first-hand exper

Bioinformatics

Author : Hamid D. Ismail
Publisher : CRC Press
ISBN 13 : 1000519074
Total Pages : 466 pages
Book Rating : 4.0/5 (5 download)

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Book Synopsis Bioinformatics by : Hamid D. Ismail

Download or read book Bioinformatics written by Hamid D. Ismail and published by CRC Press. This book was released on 2022-03-23 with total page 466 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bioinformatics: A Practical Guide to NCBI Databases and Sequence Alignments provides the basics of bioinformatics and in-depth coverage of NCBI databases, sequence alignment, and NCBI Sequence Local Alignment Search Tool (BLAST). As bioinformatics has become essential for life sciences, the book has been written specifically to address the need of a large audience including undergraduates, graduates, researchers, healthcare professionals, and bioinformatics professors who need to use the NCBI databases, retrieve data from them, and use BLAST to find evolutionarily related sequences, sequence annotation, construction of phylogenetic tree, and the conservative domain of a protein, to name just a few. Technical details of alignment algorithms are explained with a minimum use of mathematical formulas and with graphical illustrations. Key Features Provides readers with the most-used bioinformatics knowledge of bioinformatics databases and alignments including both theory and application via illustrations and worked examples. Discusses the use of Windows Command Prompt, Linux shell, R, and Python for both Entrez databases and BLAST. The companion website contains tutorials, R and Python codes, instructor materials including slides, exercises, and problems for students. This is the ideal textbook for bioinformatics courses taken by students of life sciences and for researchers wishing to develop their knowledge of bioinformatics to facilitate their own research.

Bioinformatics and Computational Biology

Author : Basant K. Tiwary
Publisher : Springer Nature
ISBN 13 : 9811642419
Total Pages : 239 pages
Book Rating : 4.8/5 (116 download)

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Book Synopsis Bioinformatics and Computational Biology by : Basant K. Tiwary

Download or read book Bioinformatics and Computational Biology written by Basant K. Tiwary and published by Springer Nature. This book was released on 2021-11-23 with total page 239 pages. Available in PDF, EPUB and Kindle. Book excerpt: This textbook introduces fundamental concepts of bioinformatics and computational biology to the students and researchers in biology, medicine, veterinary science, agriculture, and bioengineering . The respective chapters provide detailed information on biological databases, sequence alignment, molecular evolution, next-generation sequencing, systems biology, and statistical computing using R. The book also presents a case-based discussion on clinical, veterinary, agricultural bioinformatics, and computational bioengineering for application-based learning in the respective fields. Further, it offers readers guidance on reconstructing and analysing biological networks and highlights computational methods used in systems medicine and genome-wide association mapping of diseases. Given its scope, this textbook offers an essential introductory book on bioinformatics and computational biology for undergraduate and graduate students in the life sciences, botany, zoology, physiology, biotechnology, bioinformatics, and genomic science as well as systems biology, bioengineering and the agricultural, and veterinary sciences.

Introduction to Bioinformatics

Author : Anna Tramontano
Publisher : CRC Press
ISBN 13 : 1420010883
Total Pages : 192 pages
Book Rating : 4.4/5 (2 download)

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Book Synopsis Introduction to Bioinformatics by : Anna Tramontano

Download or read book Introduction to Bioinformatics written by Anna Tramontano and published by CRC Press. This book was released on 2018-10-03 with total page 192 pages. Available in PDF, EPUB and Kindle. Book excerpt: Guiding readers from the elucidation and analysis of a genomic sequence to the prediction of a protein structure and the identification of the molecular function, Introduction to Bioinformatics describes the rationale and limitations of the bioinformatics methods and tools that can help solve biological problems. Requiring only a limited mathematical and statistical background, the book shows how to efficiently apply these approaches to biological data and evaluate the resulting information. The author, an expert bioinformatics researcher, first addresses the ways of storing and retrieving the enormous amount of biological data produced every day and the methods of decrypting the information encoded by a genome. She then covers the tools that can detect and exploit the evolutionary and functional relationships among biological elements. Subsequent chapters illustrate how to predict the three-dimensional structure of a protein. The book concludes with a discussion of the future of bioinformatics. Even though the future will undoubtedly offer new tools for tackling problems, most of the fundamental aspects of bioinformatics will not change. This resource provides the essential information to understand bioinformatics methods, ultimately facilitating in the solution of biological problems.

Bioinformatics and Biomedical Engineering

Author : Ignacio Rojas
Publisher : Springer Nature
ISBN 13 : 3031078020
Total Pages : 485 pages
Book Rating : 4.0/5 (31 download)

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Book Synopsis Bioinformatics and Biomedical Engineering by : Ignacio Rojas

Download or read book Bioinformatics and Biomedical Engineering written by Ignacio Rojas and published by Springer Nature. This book was released on 2022-06-07 with total page 485 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume constitutes the proceedings of the 9th International Work-Conference on IWBBIO 2020, held in Maspalomas, Gran Canaria, Spain, in June 2022. The total of 75 papers presented in the proceedings, was carefully reviewed and selected from 212 submissions. The papers cover the latest ideas and realizations in the foundations, theory, models, and applications for interdisciplinary and multidisciplinary research encompassing disciplines of computer science, mathematics, statistics, biology, bioinformatics, and biomedicine.

The Bioinformatics Times

Author :
Publisher : Allied Publishers
ISBN 13 :
Total Pages : 144 pages
Book Rating : 4./5 ( download)

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Book Synopsis The Bioinformatics Times by :

Download or read book The Bioinformatics Times written by and published by Allied Publishers. This book was released on with total page 144 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Computational Intelligence and Bioinformatics

Author : De-Shuang Huang
Publisher : Springer
ISBN 13 : 3540372822
Total Pages : 824 pages
Book Rating : 4.5/5 (43 download)

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Book Synopsis Computational Intelligence and Bioinformatics by : De-Shuang Huang

Download or read book Computational Intelligence and Bioinformatics written by De-Shuang Huang and published by Springer. This book was released on 2006-09-01 with total page 824 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the International Conference on Intelligent Computing, ICIC 2006, held in Kunming, China, in August 2006. The book presents 165 revised full papers, carefully reviewed. Topics covered include ant colony optimization, particle swarm optimization, swarm intelligence, autonomy-oriented computing, quantum and molecular computations, biological and DNA computing, intelligent computing in bioinformatics, intelligent computing in computational biology and drug design, computational genomics and proteomics, and more.

Bioinformatics Basics

Author : Lukas K. Buehler
Publisher : CRC Press
ISBN 13 : 1482292343
Total Pages : 360 pages
Book Rating : 4.4/5 (822 download)

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Book Synopsis Bioinformatics Basics by : Lukas K. Buehler

Download or read book Bioinformatics Basics written by Lukas K. Buehler and published by CRC Press. This book was released on 2005-06-23 with total page 360 pages. Available in PDF, EPUB and Kindle. Book excerpt: Every researcher in genomics and proteomics now has access to public domain databases containing literally billions of data entries. However, without the right analytical tools, and an understanding of the biological significance of the data, cataloging and interpreting the molecular evolutionary processes buried in those databases is difficult, if not impossible. The first editon of Bioinformatics Basics: Applications in Biological Science and Medicine answered the scientific community’s need to learn about the bioinformatic tools available to them. That the book continues to be a best seller clearly demonstrates the authors’ ability to provide scientists with the understanding to apply those tools to their research. Currently, it is being used as a reference text at MIT and other prestigious institutions. Recognizing the important advances in bioinformatices since their last edition, Buehler and Rashidi have produced a completely revised and updated version of their pioneering work. To allow scientists to utilize significant databases from around the world, the authors consider some fresh approaches to data analysis while identifying computing techniques that will help them manage the massive flow of information their science requires. New to the second edition: Provides a more detailed view of the field while continuing to focus on the global concept approach that popularized the first edition. Offers the latest approaches to data analysis Introduces recent developments in genomics, microarrays, proteomics, genome mapping, and more. Adds two new sections offering insights from other experts in bioinformatics. Bioinformatics Basics is not intended to serve as a training manual for bioinformaticians. Instead, it’s designed to help the general scientific community gain a thorough understanding of what bioinformatics tools are available to them and the best ways these tools can be utilized and adapted to meet the needs of their specific interests and projects.

Integer Linear Programming in Computational and Systems Biology

Author : Dan Gusfield
Publisher : Cambridge University Press
ISBN 13 : 1108421768
Total Pages : 431 pages
Book Rating : 4.1/5 (84 download)

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Book Synopsis Integer Linear Programming in Computational and Systems Biology by : Dan Gusfield

Download or read book Integer Linear Programming in Computational and Systems Biology written by Dan Gusfield and published by Cambridge University Press. This book was released on 2019-06-13 with total page 431 pages. Available in PDF, EPUB and Kindle. Book excerpt: This hands-on tutorial text for non-experts demonstrates biological applications of a versatile modeling and optimization technique.

Bioinformatics

Author : M. H. Fulekar
Publisher : Springer Science & Business Media
ISBN 13 : 1402088809
Total Pages : 254 pages
Book Rating : 4.4/5 (2 download)

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Book Synopsis Bioinformatics by : M. H. Fulekar

Download or read book Bioinformatics written by M. H. Fulekar and published by Springer Science & Business Media. This book was released on 2009-03-24 with total page 254 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bioinformatics, computational biology, is a relatively new field that applies computer science and information technology to biology. In recent years, the discipline of bioinformatics has allowed biologists to make full use of the advances in Computer sciences and Computational statistics for advancing the biological data. Researchers in life sciences generate, collect and need to analyze an increasing number of different types of scientific data, DNA, RNA and protein sequences, in-situ and microarray gene expression including 3D protein structures and biological pathways. This book is aiming to provide information on bioinformatics at various levels. The chapters included in this book cover introductory to advanced aspects, including applications of various documented research work and specific case studies related to bioinformatics. This book will be of immense value to readers of different backgrounds such as engineers, scientists, consultants and policy makers for industry, government, academics and social and private organisations.

Algorithms in Bioinformatics

Author : Wing-Kin Sung
Publisher : CRC Press
ISBN 13 : 1420070347
Total Pages : 408 pages
Book Rating : 4.4/5 (2 download)

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Book Synopsis Algorithms in Bioinformatics by : Wing-Kin Sung

Download or read book Algorithms in Bioinformatics written by Wing-Kin Sung and published by CRC Press. This book was released on 2009-11-24 with total page 408 pages. Available in PDF, EPUB and Kindle. Book excerpt: Thoroughly Describes Biological Applications, Computational Problems, and Various Algorithmic Solutions Developed from the author's own teaching material, Algorithms in Bioinformatics: A Practical Introduction provides an in-depth introduction to the algorithmic techniques applied in bioinformatics. For each topic, the author clearly details the bi

Bioinformatics

Author : David Edwards
Publisher : Springer Science & Business Media
ISBN 13 : 0387927387
Total Pages : 450 pages
Book Rating : 4.3/5 (879 download)

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Book Synopsis Bioinformatics by : David Edwards

Download or read book Bioinformatics written by David Edwards and published by Springer Science & Business Media. This book was released on 2009-09-03 with total page 450 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bioinformatics is a relatively new field of research. It evolved from the requirement to process, characterize, and apply the information being produced by DNA sequencing technology. The production of DNA sequence data continues to grow exponentially. At the same time, improved bioinformatics such as faster DNA sequence search methods have been combined with increasingly powerful computer systems to process this information. Methods are being developed for the ever more detailed quantification of gene expression, providing an insight into the function of the newly discovered genes, while molecular genetic tools provide a link between these genes and heritable traits. Genetic tests are now available to determine the likelihood of suffering specific ailments and can predict how plant cultivars may respond to the environment. The steps in the translation of the genetic blueprint to the observed phenotype is being increasingly understood through proteome, metabolome and phenome analysis, all underpinned by advances in bioinformatics. Bioinformatics is becoming increasingly central to the study of biology, and a day at a computer can often save a year or more in the laboratory. The volume is intended for graduate-level biology students as well as researchers who wish to gain a better understanding of applied bioinformatics and who wish to use bioinformatics technologies to assist in their research. The volume would also be of value to bioinformatics developers, particularly those from a computing background, who would like to understand the application of computational tools for biological research. Each chapter would include a comprehensive introduction giving an overview of the fundamentals, aimed at introducing graduate students and researchers from diverse backgrounds to the field and bring them up-to-date on the current state of knowledge. To accommodate the broad range of topics in applied bioinformatics, chapters have been grouped into themes: gene and genome analysis, molecular genetic analysis, gene expression analysis, protein and proteome analysis, metabolome analysis, phenome data analysis, literature mining and bioinformatics tool development. Each chapter and theme provides an introduction to the biology behind the data describes the requirements for data processing and details some of the methods applied to the data to enhance biological understanding.

8th International Conference on Bioinformatics and Biomedical Engineering (iCBBE)

Author :
Publisher : DEStech Publications, Inc
ISBN 13 : 1605951943
Total Pages : 276 pages
Book Rating : 4.6/5 (59 download)

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Book Synopsis 8th International Conference on Bioinformatics and Biomedical Engineering (iCBBE) by :

Download or read book 8th International Conference on Bioinformatics and Biomedical Engineering (iCBBE) written by and published by DEStech Publications, Inc. This book was released on 2014-09-17 with total page 276 pages. Available in PDF, EPUB and Kindle. Book excerpt: It is my great pleasure to present the proceedings of the 8th International Conference on Bioinformatics and Biomedical Engineering (ICBBE 2014), held in Suzhou, China, September 20–22, 2014. I would like to take this opportunity to express my sincere thanks to all the authors and participants for their support to our conference. The continuous researches on Bioinformatics and Biomedical Engineering are now of critical significance to the sustainable development of science, education, culture and the society. Especially in modern times, it plays an important role in the interdisciplinary field among the life science, mathematical science, computer science and electronic information science. More and more scholars and practitioners, both within China and abroad, are committed themselves to the cause of this area. With the development of society and technology, a great variety of research results are emerging. Here, ICBBE provides a platform for academic professionals and industry players to exchange the most updated information and achievements in those exciting research areas. On behalf of the organizing committee, I would like to express my gratitude to our sponsors: Wuhan University and Engineering Information Institute. At the same time, we appreciate the contribution from all the paper reviewers and the committee members. It is impossible to organize such a conference without their help. The papers in the proceedings of ICBBE provide details beyond what is possible to be included in an oral presentation and constitute a concise but timely medium for the dissemination of recent research results. I hope that you can find these proceedings interesting, exciting and informative. Thanks again for your support to the ICBBE conference. Prof. Kuo-Chen Chou ICBBE 2014 Committee Chair

Computational Biology for Stem Cell Research

Author : Pawan Raghav
Publisher : Elsevier
ISBN 13 : 0443132216
Total Pages : 568 pages
Book Rating : 4.4/5 (431 download)

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Book Synopsis Computational Biology for Stem Cell Research by : Pawan Raghav

Download or read book Computational Biology for Stem Cell Research written by Pawan Raghav and published by Elsevier. This book was released on 2024-01-12 with total page 568 pages. Available in PDF, EPUB and Kindle. Book excerpt: Computational Biology for Stem Cell Research is an invaluable guide for researchers as they explore HSCs and MSCs in computational biology. With the growing advancement of technology in the field of biomedical sciences, computational approaches have reduced the financial and experimental burden of the experimental process. In the shortest span, it has established itself as an integral component of any biological research activity. HSC informatics (in silico) techniques such as machine learning, genome network analysis, data mining, complex genome structures, docking, system biology, mathematical modeling, programming (R, Python, Perl, etc.) help to analyze, visualize, network constructions, and protein-ligand or protein-protein interactions. This book is aimed at beginners with an exact correlation between the biomedical sciences and in silico computational methods for HSCs transplantation and translational research and provides insights into methods targeting HSCs properties like proliferation, self-renewal, differentiation, and apoptosis. Modeling Stem Cell Behavior: Explore stem cell behavior through animal models, bridging laboratory studies to real-world clinical allogeneic HSC transplantation (HSCT) scenarios. Bioinformatics-Driven Translational Research: Navigate a path from bench to bedside with cutting-edge bioinformatics approaches, translating computational insights into tangible advancements in stem cell research and medical applications. Interdisciplinary Resource: Discover a single comprehensive resource catering to biomedical sciences, life sciences, and chemistry fields, offering essential insights into computational tools vital for modern research.