The Role Of Organic Matter In Structuring Microbial Communities

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The Role of Organic Matter in Structuring Microbial Communities

Author : L. Kaplan
Publisher : IWA Publishing
ISBN 13 : 1843398974
Total Pages : 116 pages
Book Rating : 4.8/5 (433 download)

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Book Synopsis The Role of Organic Matter in Structuring Microbial Communities by : L. Kaplan

Download or read book The Role of Organic Matter in Structuring Microbial Communities written by L. Kaplan and published by IWA Publishing. This book was released on 2005-03-01 with total page 116 pages. Available in PDF, EPUB and Kindle. Book excerpt: Natural organic matter is important to the quality of drinking water. It constitutes precursors for disinfectant by-product formation and supports regrowth of bacteria. The drinking water industry is involved in work designed to improve biological treatment of water, control bacterial regrowth in distribution systems, and measure biodegradable NOM concentrations. These efforts would benefit from a knowledge of NOM composition and structure and the composition of microbial communities that colonize biological filters and distribution systems. In this project the researchers addressed four major goals: (1) to determine the structure and composition of natural organic matter (NOM), (2) to describe the structure of heterotrophic bacterial communities supported by raw and treated source water, (3) to measure the responses of heterotrophic bacterial communities to seasonally driven variations in NOM and temperature, and (4) to determine whether bioreactor systems can serve as small-scale models for the development and refinement of drinking water treatment processes. The five source waters selected for this project included a broad range of physiographic provinces, vegetation zones, and NOM concentrations. The research team analyzed NOM and microbial communities from an analytical hierarchy involving assessment of concentration, composition, and structure. Concentrations of NOM and BOM were estimated from dissolved organic carbon (DOC) and biodegradable DOC concentrations. NOM composition was assessed from analyses of carbohydrates with ion chromatography with pulsed amperometric detection, humic substances with XAD-8 resin, and functional groups with NMR. Molecular structure was determined from tetramethylammonium hydroxide thermochemolysis (TMAH) GC/MS. Microbial community composition was assessed from comparative ribosomal ribonucleic acid (RNA) sequencing, specifically, terminal restriction fragment length polymorphisms (t-RFLP), to provide an overview of microbial population structure and detect population shifts at the level of species. NOM Composition NOM and BOM concentrations showed extensive temporal variation in all of the source waters, but a general pattern of concentration ranges was discernable, indicating that each watershed has a particular concentration signal. Compositional studies revealed that humic substances and complex carbohydrates are components of both NOM and BOM. Structural and compositional studies identified unique NOM signatures for the different source waters, with some classes of molecules observed only in specific source waters. The BOM pool included humic substances and lignin, sources generally presumed to be relatively resistant to biodegradation. Additional novel insights included the quantitative contribution of aromatic molecules to the BOM pool and the potential for bacterial demethylation of lignin. Bacterial Communities The communities of microorganisms that developed in bioreactors that were fed water from different watersheds were unique. NOM influenced the genetic composition of resulting microbial communities, and seasonal shifts were observed for watersheds possessing strong seasonal temperature signals. Thus, temperature and organic matter quantity and quality probably influenced parameters important to the biological treatment of drinking water. A comparison of bioreactor metabolism with rapid sand filters showed some overlap, suggesting the bioreactors may indicate the ultimate potential of rapid sand filters for BOM processing. The researchers recommend the following: Bioreactors designed to monitor a BOM source should ideally be inoculated, colonized, and maintained by that source; at a minimum, acclimation to the source over several months is needed. Seasonal changes in the microbial community colonizing a biologically active filter may diminish filter performance and require an acclimation period to restore performance. Molecular-based methods for both microbial and chemical analyses of drinking water and treatment processes should be targeted for continued development and implementation within the drinking water industry. Originally published by AwwaRF for its subscribers in 2004.

Ecosystem Services and Carbon Sequestration in the Biosphere

Author : Rattan Lal
Publisher : Springer Science & Business Media
ISBN 13 : 9400764553
Total Pages : 467 pages
Book Rating : 4.4/5 (7 download)

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Book Synopsis Ecosystem Services and Carbon Sequestration in the Biosphere by : Rattan Lal

Download or read book Ecosystem Services and Carbon Sequestration in the Biosphere written by Rattan Lal and published by Springer Science & Business Media. This book was released on 2013-05-29 with total page 467 pages. Available in PDF, EPUB and Kindle. Book excerpt: Ecological functions and human wellbeing depend on ecosystem services. Among the ecosystem services are provisional (food, feed, fuel, fiber), regulating (carbon sequestration, waste recycling, water cleansing), cultural (aesthetic, recreational, spiritual), and supporting services (soil formation, photosynthesis, nutrient cycling). Many relationships of various degree exist among ecosystem services. Thus, land use and soil management to enhance biospheric carbon sinks for carbon sequestration requires a comprehensive understanding on the effects on ecosystem services. Payments for ecosystem services including carbon pricing must address the relationship between carbon sequestration and ecosystem services to minimize risks of overshoot, and promote sustainable use of land-based carbon sinks for human wellbeing.

Microbial Utilization and Transformation of Dissolved Organic Matter in Aquatic Environments - from Streams to the Deep Ocean

Author : Johanna Sjöstedt
Publisher : Frontiers Media SA
ISBN 13 : 2889711021
Total Pages : 255 pages
Book Rating : 4.8/5 (897 download)

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Book Synopsis Microbial Utilization and Transformation of Dissolved Organic Matter in Aquatic Environments - from Streams to the Deep Ocean by : Johanna Sjöstedt

Download or read book Microbial Utilization and Transformation of Dissolved Organic Matter in Aquatic Environments - from Streams to the Deep Ocean written by Johanna Sjöstedt and published by Frontiers Media SA. This book was released on 2021-07-28 with total page 255 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Soil Microbiology and Sustainable Crop Production

Author : Geoffrey R. Dixon
Publisher : Springer Science & Business Media
ISBN 13 : 9048194792
Total Pages : 444 pages
Book Rating : 4.0/5 (481 download)

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Book Synopsis Soil Microbiology and Sustainable Crop Production by : Geoffrey R. Dixon

Download or read book Soil Microbiology and Sustainable Crop Production written by Geoffrey R. Dixon and published by Springer Science & Business Media. This book was released on 2010-09-08 with total page 444 pages. Available in PDF, EPUB and Kindle. Book excerpt: Soils into which crop plants root and from which they obtain essential minerals and water contain huge arrays of microbes. Many have highly beneficial effects on crop growth and productivity, others are pathogens causing diseases and losses to yield and quality, a few microbes offer protection from these pathogenic forms and others have little or no effect. These intimate and often complex inter-relationships are being explored with increasing success providing exciting opportunities for increasing crop yields and quality in sustainable harmony with the populations of beneficial soil microbes and to the detriment of pathogens. This book explores current knowledge for each of these aspects of soil microbiology and indicates where future progress is most likely to aid in increasing crop productivity by means which are environmentally benign and beneficial.

Metal-Containing Enzymes

Author :
Publisher : Academic Press
ISBN 13 : 0128007885
Total Pages : 174 pages
Book Rating : 4.1/5 (28 download)

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Book Synopsis Metal-Containing Enzymes by :

Download or read book Metal-Containing Enzymes written by and published by Academic Press. This book was released on 2014-11-24 with total page 174 pages. Available in PDF, EPUB and Kindle. Book excerpt: Published continuously since 1944, the Advances in Protein Chemistry and Structural Biology series is the essential resource for protein chemists. Each volume brings forth new information about protocols and analysis of proteins. Each thematically organized volume is guest edited by leading experts in a broad range of protein-related topics. - Describes advances in metal-containing enzymes - Chapters are written by authorities in their field - Targeted to a wide audience of researchers, specialists, and students - The information provided in the volume is well supported by a number of high quality illustrations, figures, and tables

Microbial Ecology of the Oceans

Author : Josep M. Gasol
Publisher : John Wiley & Sons
ISBN 13 : 1119107202
Total Pages : 663 pages
Book Rating : 4.1/5 (191 download)

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Book Synopsis Microbial Ecology of the Oceans by : Josep M. Gasol

Download or read book Microbial Ecology of the Oceans written by Josep M. Gasol and published by John Wiley & Sons. This book was released on 2018-01-31 with total page 663 pages. Available in PDF, EPUB and Kindle. Book excerpt: The newly revised and updated third edition of the bestselling book on microbial ecology in the oceans The third edition of Microbial Ecology of the Oceans features new topics, as well as different approaches to subjects dealt with in previous editions. The book starts out with a general introduction to the changes in the field, as well as looking at the prospects for the coming years. Chapters cover ecology, diversity, and function of microbes, and of microbial genes in the ocean. The biology and ecology of some model organisms, and how we can model the whole of the marine microbes, are dealt with, and some of the trophic roles that have changed in the last years are discussed. Finally, the role of microbes in the oceanic P cycle are presented. Microbial Ecology of the Oceans, Third Edition offers chapters on The Evolution of Microbial Ecology of the Ocean; Marine Microbial Diversity as Seen by High Throughput Sequencing; Ecological Significance of Microbial Trophic Mixing in the Oligotrophic Ocean; Metatranscritomics and Metaproteomics; Advances in Microbial Ecology from Model Marine Bacteria; Marine Microbes and Nonliving Organic Matter; Microbial Ecology and Biogeochemistry of Oxygen-Deficient Water Columns; The Ocean’s Microscale; Ecological Genomics of Marine Viruses; Microbial Physiological Ecology of The Marine Phosphorus Cycle; Phytoplankton Functional Types; and more. A new and updated edition of a key book in aquatic microbial ecology Includes widely used methodological approaches Fully describes the structure of the microbial ecosystem, discussing in particular the sources of carbon for microbial growth Offers theoretical interpretations of subtropical plankton biogeography Microbial Ecology of the Oceans is an ideal text for advanced undergraduates, beginning graduate students, and colleagues from other fields wishing to learn about microbes and the processes they mediate in marine systems.

Soil Organic Matter in Temperate AgroecosystemsLong Term Experiments in North America

Author : Eldor A. Paul
Publisher : CRC Press
ISBN 13 : 9780849328022
Total Pages : 436 pages
Book Rating : 4.3/5 (28 download)

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Book Synopsis Soil Organic Matter in Temperate AgroecosystemsLong Term Experiments in North America by : Eldor A. Paul

Download or read book Soil Organic Matter in Temperate AgroecosystemsLong Term Experiments in North America written by Eldor A. Paul and published by CRC Press. This book was released on 1996-11-26 with total page 436 pages. Available in PDF, EPUB and Kindle. Book excerpt: The presence - or absence - of soil organic matter (SOM) has important implications for agricultural productivity. It could also have significant implications for global climate due to its role as a source/sink of carbon. Therefore, it is important to understand the issues related to the accumulation or loss of SOM, to use what we have learned from experiments to make sound decisions about soil and crop management, and to test models and future concepts concerning SOM management. A database is included with the book, presenting tabular data for 34 sites in North America. Soil Organic Matter in Temperate Agroecosystems discusses all of these issues and more, answering such questions as:

Yeasts in Natural Ecosystems: Ecology

Author : Pietro Buzzini
Publisher : Springer
ISBN 13 : 3319615750
Total Pages : 299 pages
Book Rating : 4.3/5 (196 download)

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Book Synopsis Yeasts in Natural Ecosystems: Ecology by : Pietro Buzzini

Download or read book Yeasts in Natural Ecosystems: Ecology written by Pietro Buzzini and published by Springer. This book was released on 2017-10-05 with total page 299 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents an up-to-date review of the ecology of yeast communities in natural ecosystems. It focuses on their biological interactions, including mutualism, parasitism, commensalism and antagonistic interactions, and is closely connected with the volume Yeasts in Natural Ecosystems: Diversity by the same editors. Yeasts are the smallest eukaryotic organisms successfully growing under a wide range of environmental conditions. They constantly modify the environment through their own metabolic activities. Although yeasts are among the earlier colonizers of nutrient-rich substrates, their role in ecosystem processes is not limited to the consumption and transformation of simple sugars. They also engage in close relationships with animals, plants and other fungi in the environment as mutualists, competitors, parasites and pathogens. This book reviews the diversity of biological interactions and roles of yeasts in ecosystems and summarises recent concepts and tools developed in community ecology. All of the chapters were written by leading international yeast research experts, and will appeal to researchers and advanced students in the field of microbial ecology.

Encyclopedia of Agrophysics

Author : Jan Gliński
Publisher : Springer Science & Business Media
ISBN 13 : 9048135842
Total Pages : 1075 pages
Book Rating : 4.0/5 (481 download)

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Book Synopsis Encyclopedia of Agrophysics by : Jan Gliński

Download or read book Encyclopedia of Agrophysics written by Jan Gliński and published by Springer Science & Business Media. This book was released on 2011-06-07 with total page 1075 pages. Available in PDF, EPUB and Kindle. Book excerpt: This Encyclopedia of Agrophysics will provide up-to-date information on the physical properties and processes affecting the quality of the environment and plant production. It will be a "first-up" volume which will nicely complement the recently published Encyclopedia of Soil Science, (November 2007) which was published in the same series. In a single authoritative volume a collection of about 250 informative articles and ca 400 glossary terms covering all aspects of agrophysics will be presented. The authors will be renowned specialists in various aspects in agrophysics from a wide variety of countries. Agrophysics is important both for research and practical use not only in agriculture, but also in areas like environmental science, land reclamation, food processing etc. Agrophysics is a relatively new interdisciplinary field closely related to Agrochemistry, Agrobiology, Agroclimatology and Agroecology. Nowadays it has been fully accepted as an agricultural and environmental discipline. As such this Encyclopedia volume will be an indispensable working tool for scientists and practitioners from different disciplines, like agriculture, soil science, geosciences, environmental science, geography, and engineering.

The Significance and Regulation of Soil Biodiversity

Author : Harold P. Collins
Publisher : Springer Science & Business Media
ISBN 13 : 9780792331384
Total Pages : 318 pages
Book Rating : 4.3/5 (313 download)

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Book Synopsis The Significance and Regulation of Soil Biodiversity by : Harold P. Collins

Download or read book The Significance and Regulation of Soil Biodiversity written by Harold P. Collins and published by Springer Science & Business Media. This book was released on 1995-05-31 with total page 318 pages. Available in PDF, EPUB and Kindle. Book excerpt: Selected Papers from an International Symposium held at East Lansing, Michigan, USA, May 1993

The Social Biology of Microbial Communities

Author : Institute of Medicine
Publisher : National Academies Press
ISBN 13 : 0309264324
Total Pages : 633 pages
Book Rating : 4.3/5 (92 download)

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Book Synopsis The Social Biology of Microbial Communities by : Institute of Medicine

Download or read book The Social Biology of Microbial Communities written by Institute of Medicine and published by National Academies Press. This book was released on 2013-01-10 with total page 633 pages. Available in PDF, EPUB and Kindle. Book excerpt: Beginning with the germ theory of disease in the 19th century and extending through most of the 20th century, microbes were believed to live their lives as solitary, unicellular, disease-causing organisms . This perception stemmed from the focus of most investigators on organisms that could be grown in the laboratory as cellular monocultures, often dispersed in liquid, and under ambient conditions of temperature, lighting, and humidity. Most such inquiries were designed to identify microbial pathogens by satisfying Koch's postulates.3 This pathogen-centric approach to the study of microorganisms produced a metaphorical "war" against these microbial invaders waged with antibiotic therapies, while simultaneously obscuring the dynamic relationships that exist among and between host organisms and their associated microorganisms-only a tiny fraction of which act as pathogens. Despite their obvious importance, very little is actually known about the processes and factors that influence the assembly, function, and stability of microbial communities. Gaining this knowledge will require a seismic shift away from the study of individual microbes in isolation to inquiries into the nature of diverse and often complex microbial communities, the forces that shape them, and their relationships with other communities and organisms, including their multicellular hosts. On March 6 and 7, 2012, the Institute of Medicine's (IOM's) Forum on Microbial Threats hosted a public workshop to explore the emerging science of the "social biology" of microbial communities. Workshop presentations and discussions embraced a wide spectrum of topics, experimental systems, and theoretical perspectives representative of the current, multifaceted exploration of the microbial frontier. Participants discussed ecological, evolutionary, and genetic factors contributing to the assembly, function, and stability of microbial communities; how microbial communities adapt and respond to environmental stimuli; theoretical and experimental approaches to advance this nascent field; and potential applications of knowledge gained from the study of microbial communities for the improvement of human, animal, plant, and ecosystem health and toward a deeper understanding of microbial diversity and evolution. The Social Biology of Microbial Communities: Workshop Summary further explains the happenings of the workshop.

Soil Enzymology

Author : Girish Shukla
Publisher : Springer Science & Business Media
ISBN 13 : 3642142257
Total Pages : 392 pages
Book Rating : 4.6/5 (421 download)

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Book Synopsis Soil Enzymology by : Girish Shukla

Download or read book Soil Enzymology written by Girish Shukla and published by Springer Science & Business Media. This book was released on 2010-10-17 with total page 392 pages. Available in PDF, EPUB and Kindle. Book excerpt: Soil enzymes are one of the vital key mediators involved in nutrient recycling and the decomposition of organic matter and thereby in maintaining soil quality and fertility. This Soil Biology volume covers the various facets of soil enzymes, such as their functions, biochemical and microbiological properties and the factors affecting their activities. Enzymes in the rhizosphere, in forest soils, and in volcanic ash-derived soils are described. Soil enzymes covered include phosphohydrolases, lignocellulose-degrading enzymes, phenol oxidases, fungal oxidoreductases, keratinases, pectinases, xylanases, lipases and pectinases. Several chapters treat the soil enzymatic activities in the bioremediation of soils contaminated with pesticides and pollutants such as oil, chlorinated compounds, synthetic dyes and aromatic hydrocarbons. The role of soil enzymes as bioindicators is a further important topic addressed.

Enzymes in the Environment

Author : Richard G. Burns
Publisher : CRC Press
ISBN 13 : 0824744209
Total Pages : 740 pages
Book Rating : 4.8/5 (247 download)

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Book Synopsis Enzymes in the Environment by : Richard G. Burns

Download or read book Enzymes in the Environment written by Richard G. Burns and published by CRC Press. This book was released on 2002-01-29 with total page 740 pages. Available in PDF, EPUB and Kindle. Book excerpt: The need to understand the biological processes that are important for essential aquatic and terrestrial ecosystem function has prompted much research into the field of ecological enzymology. This book presents the two broad areas of application in a compilation of reviews by 21 international experts in their respective fields. The first explores enzymatic activities to assess the processes or mechanisms that operate in a given system, such as the rhizosphere, plant leaves and shoots, soil surfaces, and biofilms. The second considers enzymes or microbial cells as sensors to detect microbial activity and stresses due to pollution, management, or climatic change in both aquatic and terrestrial ecosystems.

Standard Soil Methods for Long-term Ecological Research

Author : G. P. Robertson
Publisher : Oxford University Press, USA
ISBN 13 : 0195120833
Total Pages : 481 pages
Book Rating : 4.1/5 (951 download)

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Book Synopsis Standard Soil Methods for Long-term Ecological Research by : G. P. Robertson

Download or read book Standard Soil Methods for Long-term Ecological Research written by G. P. Robertson and published by Oxford University Press, USA. This book was released on 1999 with total page 481 pages. Available in PDF, EPUB and Kindle. Book excerpt: The goal of the volume is to facilitate cross-site synthesis and evaluation of ecosystem processes. The book is the first broadly based compendium of standardized soil measurement methods and will be an invaluable resource for ecologists, agronomists, and soil scientists."--BOOK JACKET.

The Ecophysiology of Plant-Phosphorus Interactions

Author : Philip J. White
Publisher : Springer Science & Business Media
ISBN 13 : 1402084358
Total Pages : 296 pages
Book Rating : 4.4/5 (2 download)

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Book Synopsis The Ecophysiology of Plant-Phosphorus Interactions by : Philip J. White

Download or read book The Ecophysiology of Plant-Phosphorus Interactions written by Philip J. White and published by Springer Science & Business Media. This book was released on 2008-06-03 with total page 296 pages. Available in PDF, EPUB and Kindle. Book excerpt: Phosphorus (P) is an essential macronutrient for plant growth. It is as phosphate that plants take up P from the soil solution. Since little phosphate is available to plants in most soils, plants have evolved a range of mechanisms to acquire and use P efficiently – including the development of symbiotic relationships that help them access sources of phosphorus beyond the plant’s own range. At the same time, in agricultural systems, applications of inorganic phosphate fertilizers aimed at overcoming phosphate limitation are unsustainable and can cause pollution. This latest volume in Springer’s Plant Ecophysiology series takes an in-depth look at these diverse plant-phosphorus interactions in natural and agricultural environments, presenting a series of critical reviews on the current status of research. In particular, the book presents a wealth of information on the genetic and phenotypic variation in natural plant ecosystems adapted to low P availability, which could be of particular relevance to developing new crop varieties with enhanced abilities to grow under P-limiting conditions. The book provides a valuable reference material for graduates and research scientists working in the field of plant-phosphorus interactions, as well as for those working in plant breeding and sustainable agricultural development.

Nutrient Cycling and Limitation

Author : Peter M. Vitousek
Publisher : Princeton University Press
ISBN 13 : 0691190348
Total Pages : 246 pages
Book Rating : 4.6/5 (911 download)

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Book Synopsis Nutrient Cycling and Limitation by : Peter M. Vitousek

Download or read book Nutrient Cycling and Limitation written by Peter M. Vitousek and published by Princeton University Press. This book was released on 2018-06-26 with total page 246 pages. Available in PDF, EPUB and Kindle. Book excerpt: The availability or lack of nutrients shapes ecosystems in fundamental ways. From forest productivity to soil fertility, from the diversity of animals to the composition of microbial communities, nutrient cycling and limitation are the basic mechanisms underlying ecosystem ecology. In this book, Peter Vitousek builds on over twenty years of research in Hawai'i to evaluate the controls and consequences of variation in nutrient availability and limitation. Integrating research from geochemistry, pedology, atmospheric chemistry, ecophysiology, and ecology, Vitousek addresses fundamental questions: How do the cycles of different elements interact? How do biological processes operating in minutes or hours interact with geochemical processes operating over millions of years? How does biological diversity interact with nutrient cycling and limitation in ecosystems? The Hawaiian Islands provide the author with an excellent model system for answering these questions as he integrates across levels of biological organization. He evaluates the connections between plant nutrient use efficiency, nutrient cycling and limitation within ecosystems, and nutrient input-output budgets of ecosystems. This book makes use of the Hawaiian ecosystems to explore the mechanisms that shape productivity and diversity in ecosystems throughout the world. It will be essential reading for all ecologists and environmental scientists.

Nutrient Cycling in Terrestrial Ecosystems

Author : Petra Marschner
Publisher : Springer Science & Business Media
ISBN 13 : 3540680276
Total Pages : 409 pages
Book Rating : 4.5/5 (46 download)

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Book Synopsis Nutrient Cycling in Terrestrial Ecosystems by : Petra Marschner

Download or read book Nutrient Cycling in Terrestrial Ecosystems written by Petra Marschner and published by Springer Science & Business Media. This book was released on 2007-05-01 with total page 409 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents a comprehensive overview of nutrient cycling processes and their importance for plant growth and ecosystem sustainability. The book combines fundamental scientific studies and devised practical approaches. It contains contributions of leading international authorities from various disciplines resulting in multidisciplinary approaches, and all chapters have been carefully reviewed. This volume will support scientists and practitioners alike.