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The Molecular Genetic Basis Of Natural Variation In Trichome Density In Arabidopsis Thaliana
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Book Synopsis The Molecular Genetic Basis of Natural Variation in Trichome Density in Arabidopsis Thaliana by : Rebecca Bloomer
Download or read book The Molecular Genetic Basis of Natural Variation in Trichome Density in Arabidopsis Thaliana written by Rebecca Bloomer and published by . This book was released on 2013 with total page 157 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Genetics of Adaptation by : Rodney Mauricio
Download or read book Genetics of Adaptation written by Rodney Mauricio and published by Springer Science & Business Media. This book was released on 2005-07-20 with total page 207 pages. Available in PDF, EPUB and Kindle. Book excerpt: An enduring controversy in evolutionary biology is the genetic basis of adaptation. Darwin emphasized "many slight differences" as the ultimate source of variation to be acted upon by natural selection. In the early 1900’s, this view was opposed by "Mendelian geneticists", who emphasized the importance of "macromutations" in evolution. The Modern Synthesis resolved this controversy, concluding that mutations in genes of very small effect were responsible for adaptive evolution. A decade ago, Allen Orr and Jerry Coyne reexamined the evidence for this neo-Darwinian view and found that both the theoretical and empirical basis for it were weak. Orr and Coyne encouraged evolutionary biologists to reexamine this neglected question: what is the genetic basis of adaptive evolution? In this volume, a new generation of biologists have taken up this challenge. Using advances in both molecular genetic and statistical techniques, evolutionary geneticists have made considerable progress in this emerging field. In this volume, a diversity of examples from plant and animal studies provides valuable information for those interested in the genetics and evolution of complex traits.
Book Synopsis The Genetic and Molecular Basis of Natural Variation for Plant Growth and Related Traits in Arabidopsis Thaliana by : Bjorn Pieper
Download or read book The Genetic and Molecular Basis of Natural Variation for Plant Growth and Related Traits in Arabidopsis Thaliana written by Bjorn Pieper and published by . This book was released on 2009 with total page 131 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Ecological Genomics by : Christian R. Landry
Download or read book Ecological Genomics written by Christian R. Landry and published by Springer Science & Business Media. This book was released on 2013-11-25 with total page 358 pages. Available in PDF, EPUB and Kindle. Book excerpt: Researchers in the field of ecological genomics aim to determine how a genome or a population of genomes interacts with its environment across ecological and evolutionary timescales. Ecological genomics is trans-disciplinary by nature. Ecologists have turned to genomics to be able to elucidate the mechanistic bases of the biodiversity their research tries to understand. Genomicists have turned to ecology in order to better explain the functional cellular and molecular variation they observed in their model organisms. We provide an advanced-level book that covers this recent research and proposes future development for this field. A synthesis of the field of ecological genomics emerges from this volume. Ecological Genomics covers a wide array of organisms (microbes, plants and animals) in order to be able to identify central concepts that motivate and derive from recent investigations in different branches of the tree of life. Ecological Genomics covers 3 fields of research that have most benefited from the recent technological and conceptual developments in the field of ecological genomics: the study of life-history evolution and its impact of genome architectures; the study of the genomic bases of phenotypic plasticity and the study of the genomic bases of adaptation and speciation.
Book Synopsis Decoding the Complexity of Natural Variation for Shoot Growth and Response to the Environment in Arabidopsis Thaliana by : Charlotte Trontin
Download or read book Decoding the Complexity of Natural Variation for Shoot Growth and Response to the Environment in Arabidopsis Thaliana written by Charlotte Trontin and published by . This book was released on 2013 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Genotypes adapted to contrasting environments are expected to behave differently when placed in common controlled conditions, if their sensitivity to environmental cues or intrinsic growth behaviour are set to different thresholds, or are limited at distinct levels. This allows natural variation to be exploited as an unlimited source of new alleles or genes for the study of the genetic basis of quantitative trait variation. My doctoral work focuses on analysing natural variation for shoot growth and response to the environment in A. thaliana. Natural variation analyses aim at understanding how molecular genetic or epigenetic diversity controls phenotypic variation at different scales and times of plant development and under different environmental conditions, and how selection or demographic processes influence the frequency of those molecular variants in populations for them to get adapted to their local environment. As such, the analysis of A. thaliana natural variation can be addressed using a variety of approaches, from genetics and molecular methods to ecology and evolutionary questions. During my PhD, I got the chance to tackle several of those aspects through my contributions to three independent projects which have in common to exploit A. thaliana natural variation. The first one is the analysis of the pattern of polymorphism from a set of 102 A. thaliana accessions at the MOT1 gene coding for a molybdate transporter (an essential micronutrient) and responsible for contrasted growth and fitness among accessions in response to Mo availability in the soil. I showed at different geographical scales that MOT1 pattern of polymorphisms is not consistent with neutral evolution and shows signs of diversifying selection. This work helped reinforce the hypothesis that in some populations, mutations in MOT1 have been selected to face soils rich in Mo and potentially deleterious despite their negative effect on Mo-limiting soils. The second project consists in the characterisation and functional analysis of two putative receptor-like kinases (RLKs) identified from their effect on shoot growth specifically under mannitol-supplemented media and not in response to other osmotic constraints. The function of such RLKs in A. thaliana, which is not known to synthesize mannitol was intriguing at first but, through different experiments, we built the hypothesis that those RLKs could be activated by the mannitol produced by some pathogens such as fungi and participate to plant defensive response. The third project, in collaboration with Michel Vincentz's team from CBMEG (Brasil) and Vincent Colot (IBENS, Paris), consists in the analysis of the occurrence of natural epigenetic variants of the QQS gene in different populations from Central Asia and their possible phenotypic and adaptive consequences. Overall, these analyses of the genetic and epigenetic molecular variation leading to the biomass phenotype(s) in interaction with the environment provide clues as to how and where in the pathways adaptation is shaping natural variation.
Book Synopsis Induced Plant Resistance to Herbivory by : Andreas Schaller
Download or read book Induced Plant Resistance to Herbivory written by Andreas Schaller and published by Springer Science & Business Media. This book was released on 2008-03-27 with total page 450 pages. Available in PDF, EPUB and Kindle. Book excerpt: This timely book provides an overview of the anatomical, chemical, and developmental features contributing to plant defense, with an emphasis on plant responses that are induced by wounding or herbivore attack. The book first introduces general concepts of direct and indirect defenses, followed by a focused review of the different resistance traits. Finally, signal perception and transduction mechanism for the activation of plant defense responses are discussed.
Book Synopsis Host-Plant Selection by Phytophagous Insects by : Elizabeth A. Bernays
Download or read book Host-Plant Selection by Phytophagous Insects written by Elizabeth A. Bernays and published by Springer Science & Business Media. This book was released on 2007-08-19 with total page 326 pages. Available in PDF, EPUB and Kindle. Book excerpt: For more than 20 years insect/plant relations have been a focus for studies in ecology and evolution. The importance of insects as crop pests, and the great potential of insects for the biological control of weeds, have provided further impetus for work in this area. All this attention has resulted in books on various aspects of the topic, and reviews and research papers are abundant. So why write another book? It seems to us that, in the midst of all this activity, behavior has been neglected. We do not mean to suggest that there have not been admirable papers on behavior. The fact that we can write this book attests to that. But we feel that, too often, behavior is relegated to a back seat. In comparison to the major ecological and evolutionary questions, it may seem trivial. Yet the whole process of host-plant selection and host-plant specificity amongst insects depends on behavior, and selection for behavioral differences must be a prime factor in the evolution of host-plant specificity. In writing this book, we hope to draw attention to this central role of behavior and, hopefully, encourage a few students to attack some of the very difficult questions that remain unanswered.
Book Synopsis Regulation of Cell Fate Determination in Plants by : John Schiefelbein
Download or read book Regulation of Cell Fate Determination in Plants written by John Schiefelbein and published by Frontiers E-books. This book was released on 2014-10-24 with total page 85 pages. Available in PDF, EPUB and Kindle. Book excerpt: Plants are made up of a large number of distinct cell types that originate from a single fertilized egg cell. How the diversity of cell types arise in appropriate places is one of the most fascinating and attractive research areas of plant biology. During the past several decades, due to the development of new molecular techniques and tools, advances in optical microscopy, and availability of whole genome information and mutants in the model plant Arabidopsis and other plants, great advances have been made in understanding the mechanisms involved in cell fate determination in plants. Multiple mechanisms are used to generate cellular diversity. Asymmetric cell division is one of the primary mechanisms. As an example, asymmetric cell division enables one stem cell to generate a stem cell daughter and a daughter with a distinct identity. Initially equivalent cells can also differentiate to generate different cell types. This mechanism has been clearly demonstrated in the formation of multiple cell types during epidermis development in the shoot and root. Cell fate determination is influenced by both intrinsic factors, i.e, developmental regulators, as well as extrinsic signals, i.e., environmental stimuli. By using model systems like stomata, trichome, root hair and shoot and root apical meristem cells, ligands, receptors and transcription factors have been found to regulate cell fate determination. However, the details of signaling cassettes responsible for cell fate determination remain largely unknown. Plants are made up of a large number of distinct cell types that originate from a single fertilized egg cell. How the diversity of cell types arise in appropriate places is one of the most fascinating and attractive research areas of plant biology. During the past several decades, due to the development of new molecular techniques and tools, advances in optical microscopy, and availability of whole genome information and mutants in the model plant Arabidopsis and other plants, great advances have been made in understanding the mechanisms involved in cell fate determination in plants. This research topic contains 12 collected articles, including 2 Opinion Articles, 5 Reviews, 4 Mini Reviews, and 1 Original Research Article. Hopefully, these articles will expand our understanding of the regulation of cell fate determination in plants.
Book Synopsis The Logic of Chance by : Eugene V. Koonin
Download or read book The Logic of Chance written by Eugene V. Koonin and published by FT Press. This book was released on 2011-06-23 with total page 530 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Logic of Chance offers a reappraisal and a new synthesis of theories, concepts, and hypotheses on the key aspects of the evolution of life on earth in light of comparative genomics and systems biology. The author presents many specific examples from systems and comparative genomic analysis to begin to build a new, much more detailed, complex, and realistic picture of evolution. The book examines a broad range of topics in evolutionary biology including the inadequacy of natural selection and adaptation as the only or even the main mode of evolution; the key role of horizontal gene transfer in evolution and the consequent overhaul of the Tree of Life concept; the central, underappreciated evolutionary importance of viruses; the origin of eukaryotes as a result of endosymbiosis; the concomitant origin of cells and viruses on the primordial earth; universal dependences between genomic and molecular-phenomic variables; and the evolving landscape of constraints that shape the evolution of genomes and molecular phenomes. "Koonin's account of viral and pre-eukaryotic evolution is undoubtedly up-to-date. His "mega views" of evolution (given what was said above) and his cosmological musings, on the other hand, are interesting reading." Summing Up: Recommended Reprinted with permission from CHOICE, copyright by the American Library Association.
Book Synopsis Genetics and Genomics of the Brassicaceae by : Renate Schmidt
Download or read book Genetics and Genomics of the Brassicaceae written by Renate Schmidt and published by Springer Science & Business Media. This book was released on 2010-12-03 with total page 675 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Genetics and Genomics of the Brassicaceae provides a review of this important family (commonly termed the mustard family, or Cruciferae). The family contains several cultivated species, including radish, rocket, watercress, wasabi and horseradish, in addition to the vegetable and oil crops of the Brassica genus. There are numerous further species with great potential for exploitation in 21st century agriculture, particularly as sources of bioactive chemicals. These opportunities are reviewed, in the context of the Brassicaceae in agriculture. More detailed descriptions are provided of the genetics of the cultivated Brassica crops, including both the species producing most of the brassica vegetable crops (B. rapa and B. oleracea) and the principal species producing oilseed crops (B. napus and B. juncea). The Brassicaceae also include important “model” plant species. Most prominent is Arabidopsis thaliana, the first plant species to have its genome sequenced. Natural genetic variation is reviewed for A. thaliana, as are the genetics of the closely related A. lyrata and of the genus Capsella. Self incompatibility is widespread in the Brassicaceae, and this subject is reviewed. Interest arising from both the commercial value of crop species of the Brassicaceae and the importance of Arabidopsis thaliana as a model species, has led to the development of numerous resources to support research. These are reviewed, including germplasm and genomic library resources, and resources for reverse genetics, metabolomics, bioinformatics and transformation. Molecular studies of the genomes of species of the Brassicaceae revealed extensive genome duplication, indicative of multiple polyploidy events during evolution. In some species, such as Brassica napus, there is evidence of multiple rounds of polyploidy during its relatively recent evolution, thus the Brassicaceae represent an excellent model system for the study of the impacts of polyploidy and the subsequent process of diploidisation, whereby the genome stabilises. Sequence-level characterization of the genomes of Arabidopsis thaliana and Brassica rapa are presented, along with summaries of comparative studies conducted at both linkage map and sequence level, and analysis of the structural and functional evolution of resynthesised polyploids, along with a description of the phylogeny and karyotype evolution of the Brassicaceae. Finally, some perspectives of the editors are presented. These focus upon the Brassicaceae species as models for studying genome evolution following polyploidy, the impact of advances in genome sequencing technology, prospects for future transcriptome analysis and upcoming model systems.
Book Synopsis Plant Responses to the Environment by : Peter M. Gresshoff
Download or read book Plant Responses to the Environment written by Peter M. Gresshoff and published by CRC Press. This book was released on 1993-07-23 with total page 212 pages. Available in PDF, EPUB and Kindle. Book excerpt: Plant Responses to the Environment covers the fundamental mechanisms of plant responses to biotic and abiotic environmental stimuli. By combining established disciplines like physiology and genetics with new approaches stemming from molecular biology and biophysics, a new synthesis is achieved. For example, this book deals with the effects of microgravity on plant development, and it provides an extensive analysis of plant perception and response to low oxygen and high ozone. New techniques such as those used for gene transfer using the biolistic gene gun approach in soybeans are described. Other topics considered include systemic acquired resistance (SAR) in plants and recent advances in understanding how legume roots perceive bacterial lipooligosaccharide signals. A glossary, subject index, and author index are also provided. Plant Responses to the Environment will be a valuable reference for plant physiologists, ecophysiologists, agronomists, plant molecular biologists, experimental botanists, and other researchers interested in the topic.
Book Synopsis Evolutionary Ecology of Plant-Herbivore Interaction by : Juan Núñez-Farfán
Download or read book Evolutionary Ecology of Plant-Herbivore Interaction written by Juan Núñez-Farfán and published by Springer Nature. This book was released on 2020-07-30 with total page 378 pages. Available in PDF, EPUB and Kindle. Book excerpt: Plant-herbivore interactions are a central topic in evolutionary ecology. Historically, their study has been a cornerstone for coevolutionary theory. Starting from classic ecological studies at the phenotypic level, it has since expanded to molecular and genomic approaches. After a historical perspective, the book’s subsequent chapters cover a wide range of topics: from populations to ecosystems; plant- and herbivore-focused studies; in natural and in man-modified ecosystems; and both micro- and macro-evolutionary levels. All chapters include valuable background information and empirical evidence. Given its scope, the book will be of interest to both students and researchers, and will hopefully stimulate further research in this exciting field of evolutionary biology.
Book Synopsis Comparative Wood Anatomy by : Sherwin Carlquist
Download or read book Comparative Wood Anatomy written by Sherwin Carlquist and published by Springer Science & Business Media. This book was released on 2013-06-29 with total page 447 pages. Available in PDF, EPUB and Kindle. Book excerpt: This second edition has been completely revised and has incorporated significant changes that have occurred in wood anatomy over the past years. "This book is recommended to all who are interested in a modern, stimulating, competent, and well illustrated work." (Holzforschung).
Book Synopsis Plant Variation and Evolution by : David Briggs
Download or read book Plant Variation and Evolution written by David Briggs and published by Cambridge University Press. This book was released on 2016-06-30 with total page 595 pages. Available in PDF, EPUB and Kindle. Book excerpt: The long-awaited fourth edition of a classic text, now fully revised and updated for the molecular era.
Book Synopsis Plant Systems Biology by : Sacha Baginsky
Download or read book Plant Systems Biology written by Sacha Baginsky and published by Springer Science & Business Media. This book was released on 2007-06-25 with total page 362 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume aims to provide a timely view of the state-of-the-art in systems biology. The editors take the opportunity to define systems biology as they and the contributing authors see it, and this will lay the groundwork for future studies. The volume is well-suited to both students and researchers interested in the methods of systems biology. Although the focus is on plant systems biology, the proposed material could be suitably applied to any organism.
Book Synopsis Polyploidy and Genome Evolution by : Pamela Soltis
Download or read book Polyploidy and Genome Evolution written by Pamela Soltis and published by Springer Science & Business Media. This book was released on 2012-10-03 with total page 416 pages. Available in PDF, EPUB and Kindle. Book excerpt: Polyploidy – whole-genome duplication (WGD) – is a fundamental driver of biodiversity with significant consequences for genome structure, organization, and evolution. Once considered a speciation process common only in plants, polyploidy is now recognized to have played a major role in the structure, gene content, and evolution of most eukaryotic genomes. In fact, the diversity of eukaryotes seems closely tied to multiple WGDs. Polyploidy generates new genomic interactions – initially resulting in “genomic and transcriptomic shock” – that must be resolved in a new polyploid lineage. This process essentially acts as a “reset” button, resulting in genomic changes that may ultimately promote adaptive speciation. This book brings together for the first time the conceptual and theoretical underpinnings of polyploid genome evolution with syntheses of the patterns and processes of genome evolution in diverse polyploid groups. Because polyploidy is most common and best studied in plants, the book emphasizes plant models, but recent studies of vertebrates and fungi are providing fresh perspectives on factors that allow polyploid speciation and shape polyploid genomes. The emerging paradigm is that polyploidy – through alterations in genome structure and gene regulation – generates genetic and phenotypic novelty that manifests itself at the chromosomal, physiological, and organismal levels, with long-term ecological and evolutionary consequences.
Book Synopsis Principles of Soil and Plant Water Relations by : M.B. Kirkham
Download or read book Principles of Soil and Plant Water Relations written by M.B. Kirkham and published by Academic Press. This book was released on 2014-04-21 with total page 599 pages. Available in PDF, EPUB and Kindle. Book excerpt: Principles of Soil and Plant Water Relations, 2e describes the principles of water relations within soils, followed by the uptake of water and its subsequent movement throughout and from the plant body. This is presented as a progressive series of physical and biological interrelations, even though each topic is treated in detail on its own. The book also describes equipment used to measure water in the soil-plant-atmosphere system. At the end of each chapter is a biography of a scientist whose principles are discussed in the chapter. In addition to new information on the concept of celestial time, this new edition also includes new chapters on methods to determine sap flow in plants dual-probe heat-pulse technique to monitor water in the root zone. Provides the necessary understanding to address advancing problems in water availability for meeting ecological requirements at local, regional and global scales Covers plant anatomy: an essential component to understanding soil and plant water relations
