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Proceedings Of The 3rd Asia Pacific Bioinformatics Conference
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Book Synopsis Proceedings of the 3rd Asia-Pacific Bioinformatics Conference by : Asia Pacific Bioinformatics Conference (3, 2005, Singapore)
Download or read book Proceedings of the 3rd Asia-Pacific Bioinformatics Conference written by Asia Pacific Bioinformatics Conference (3, 2005, Singapore) and published by . This book was released on 2005 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Proceedings of the 3rd Asia-Pacific Bioinformatics Conference by : Yi-Ping Phoebe Chen
Download or read book Proceedings of the 3rd Asia-Pacific Bioinformatics Conference written by Yi-Ping Phoebe Chen and published by World Scientific. This book was released on 2005-01-06 with total page 400 pages. Available in PDF, EPUB and Kindle. Book excerpt: High-throughput sequencing and functional genomics technologies have given us a draft human genome sequence and have enabled large-scale genotyping and gene expression profiling of human populations. Databases containing large number of sequences, polymorphisms, and gene expression profiles of normal and diseased tissues in different clinical states are rapidly being generated for human and model organisms. Bioinformatics is thus rapidly growing in importance in the annotation of genomic sequences, in the understanding of the interplay between genes and proteins, in the analysis the genetic variability of species, etc. The 3rd APBC brings together researchers, professionals, and industrial practitioners for interaction and exchange of knowledge and ideas. The proceedings contains the latest results that address conceptual and practical issues of bioinformatics. Papers presented at APBC'05 and included in this proceedings volume span the following: Novel Applications in Bioinformatics, Computational Analysis of Biological Data, Data Mining & Statistical Modeling of Biological Data, Modeling and Simulation of Biological Processes, Visualization of Biological Processes and Data, Management, Migration, and Integration of Biological Databases, Access, Indexing, and Search in Biological Databases. Contents:A Better Gap Penalty for Pairwise-SVM (H N Chua & W-K Sung)A Graph Database with Visual Queries for Genomics (G Butler et al.)Consensus Fold Recognition by Predicted Model Quality (J Xu et al.)Toward Discovering Disease-Specific Gene Networks from Online Literature (Z Zhang et al.)Hybrid Registration for Two-Dimensional Gel Protein Images (X Wang & D D Feng)Exact Algorithms for Motif Search (S Rajasekaran et al.)Voting Algorithms for Discovering Long Motifs (F Y L Chin & H C M Leung)A Highly Scalable Algorithm for the Extraction of Cis-Regulatory Regions (A M Carvalho et al.)A Support Vector Machine Approach for Prediction of T Cell Epitopes (L Huang & Y Dai)Protein Informations Towards Integration of Data Grid and Computing Grid (H Nakamura)Computing the Assignment of Orthologous Genes via Genome Rearrangement (X Chen et al.)and other papers Readership: Computational biologists, bioinformaticists, computer scientists, biologists. Keywords:Bioinformatics;Computational Biology;Datamining;Biological Data;Modeling;Visualization;Database Management;Database Integration;Biological Database Indexing;Biological Database Search
Book Synopsis Proceedings of the 3rd Asia-Pacific Bioinformatics Conference by :
Download or read book Proceedings of the 3rd Asia-Pacific Bioinformatics Conference written by and published by . This book was released on 2005 with total page 384 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Proceedings of the 5th Asia-Pacific Bioinformatics Conference by :
Download or read book Proceedings of the 5th Asia-Pacific Bioinformatics Conference written by and published by . This book was released on 2008 with total page 106 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Proceedings of the 5th Asia-Pacific Bioinformatics Conference by : David Sankoff
Download or read book Proceedings of the 5th Asia-Pacific Bioinformatics Conference written by David Sankoff and published by Imperial College Press. This book was released on 2007 with total page 391 pages. Available in PDF, EPUB and Kindle. Book excerpt: High-throughput sequencing and functional genomics technologies have given us the human genome sequence as well as those of other experimentally, medically, and agriculturally important species, and have enabled large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, structures, and gene expression profiles of normal and diseased tissues are being rapidly generated for human and model organisms. Bioinformatics is thus rapidly growing in importance in the annotation of genomic sequences; the understanding of the interplay among and between genes and proteins; the analysis of genetic variability of species; the identification of pharmacological targets; and the inference of evolutionary origins, mechanisms, and relationships. This proceedings volume contains an up-to-date exchange of knowledge, ideas, and solutions to conceptual and practical issues of bioinformatics by researchers, professionals, and industrial practitioners at the 5th Asia-Pacific Bioinformatics Conference held in Hong Kong in January 2007.
Book Synopsis Proceedings of the 6th Asia-Pacific Bioinformatics Conference by : Alvis Brazma
Download or read book Proceedings of the 6th Asia-Pacific Bioinformatics Conference written by Alvis Brazma and published by World Scientific. This book was released on 2007-12 with total page 413 pages. Available in PDF, EPUB and Kindle. Book excerpt: High-throughput sequencing and functional genomics technologies have given us the human genome sequence as well as those of other experimentally, medically, and agriculturally important species, thus enabling large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, structures, metabolic pathways, and gene expression profiles of normal and diseased tissues are rapidly being generated for human and model organisms. Bioinformatics is therefore gaining importance in the annotation of genomic sequences; the understanding of the interplay among and between genes and proteins; the analysis of the genetic variability of species; the identification of pharmacological targets; and the inference of evolutionary origins, mechanisms, and relationships. This proceedings volume contains an up-to-date exchange of knowledge, ideas, and solutions to conceptual and practical issues of bioinformatics by researchers, professionals, and industry practitioners at the 6th Asia-Pacific Bioinformatics Conference held in Kyoto, Japan, in January 2008.
Book Synopsis Proceedings of the 6th Asia-Pacific Bioinformatics Conference by : Alvis Brazma
Download or read book Proceedings of the 6th Asia-Pacific Bioinformatics Conference written by Alvis Brazma and published by World Scientific. This book was released on 2007-12-21 with total page 412 pages. Available in PDF, EPUB and Kindle. Book excerpt: High-throughput sequencing and functional genomics technologies have given us the human genome sequence as well as those of other experimentally, medically, and agriculturally important species, thus enabling large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, structures, metabolic pathways, and gene expression profiles of normal and diseased tissues are rapidly being generated for human and model organisms. Bioinformatics is therefore gaining importance in the annotation of genomic sequences; the understanding of the interplay among and between genes and proteins; the analysis of the genetic variability of species; the identification of pharmacological targets; and the inference of evolutionary origins, mechanisms, and relationships. This proceedings volume contains an up-to-date exchange of knowledge, ideas, and solutions to conceptual and practical issues of bioinformatics by researchers, professionals, and industry practitioners at the 6th Asia-Pacific Bioinformatics Conference held in Kyoto, Japan, in January 2008. Contents:Recent Progress in Phylogenetic Combinatorics (A Dress)Predicting Nucleolar Proteins Using Support-Vector Machines (M Bodén)Structure-Approximating Design of Stable Proteins in 2D HP Model Fortified by Cysteine Monomers (A H Khodabakhshi et al.)Seed Optimization Is No Easier than Optimal Golomb Ruler Design (B Ma & H Yao)Analysis of Structural Strand Asymmetry in Non-coding RNAs (J Wen et al.)Genome Halving with Double Cut and Join (R Warren & D Sankoff)Symbolic Approaches for Finding Control Strategies in Boolean Networks (C J Langmead & S K Jha)Optimal Algorithm for Finding DNA Motifs with Nucleotide Adjacent Dependency (F Y L Chin et al.)and other papers Readership: Academics, researchers, and graduate students in bioinformatics and computer science. Keywords:Bioinformatics;Computational Biology;Systems Biology;Statistical Modeling;Comparative Genomics;Evolutionary Biology;Data Mining;Structural Bioinformatics;Statistical Genetics;Algorithms
Book Synopsis Proceedings of the 4th Asia-Pacific Bioinformatics Conference by : Tao Jiang
Download or read book Proceedings of the 4th Asia-Pacific Bioinformatics Conference written by Tao Jiang and published by World Scientific. This book was released on 2005-12-13 with total page 380 pages. Available in PDF, EPUB and Kindle. Book excerpt: High-throughput sequencing and functional genomics technologies have given us a draft human genome sequence and have enabled large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, and gene expression profiles of normal and diseased tissues in different clinical states are rapidly being generated for human and model organisms. Bioinformatics is thus rapidly growing in importance in the annotation of genomic sequences, in the understanding of the interplay between genes and proteins, in the analysis of the genetic variability of species, and so on. This proceedings contains an up-to-date exchange of knowledge, ideas, and solutions to conceptual and practical issues of bioinformatics, by researchers, professionals, and industrial practitioners at the 4th Asia-Pacific Bioinformatics Conference held in Taipei in February 2006. Contents:Accuracy of Four Heuristics for the Full Sibship Reconstruction Problem in the Presence of Genotype Errors (D A Konovalov)Predicting Ranked SCOP Domains by Mining Asociations of Visual Contents in Distance Matrices (P-H Chi & C-R Shyu)An Efficient Algorithm for String Motif Discovery (F Y L Chin & H C M Leung)On the Complexity of Finding Control Strategies for Boolean Networks (T Akutsu et al.)Microarray Missing Value Imputation by Iterated Local Least Squares (Z Cai et al.)Techniques for Assessing Phylogenetic Branch Support: A Performance Study (D Ruths & L Nakhleh)Identification of Over-Represented Combinations of Transcription Factor Binding Sites in Sets of Co-Expressed Genes (S-S Huang et al.)A Knowledge-Based Approach to Protein Local Structure Prediction (C-T Chen et al.)Resolving the Gene Tree and Species Tree Problem by Phylogenetic Mining (X Han)Gene Expression Data Clustering Based on Local Similarity Combination (D Pan & F Wang)and other papers Readership: Academics, researchers, graduate students in bioinformatics and computer science. Keywords:Bioinformatics;Computational Biology;Systems Biology;Statistical Modeling;Comparative Genomics;Evolutionary Biology;Data Mining;Structural Bioinformatics;Statistical Genetics
Book Synopsis Proceedings of the 7th Asia-Pacific Bioinformatics Conference, Beijing, China, 13-16 January 2009 by :
Download or read book Proceedings of the 7th Asia-Pacific Bioinformatics Conference, Beijing, China, 13-16 January 2009 written by and published by . This book was released on 2009 with total page 936 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Proceedings of the 4th Asia-Pacific Bioinformatics Conference by : Tao Jiang
Download or read book Proceedings of the 4th Asia-Pacific Bioinformatics Conference written by Tao Jiang and published by Advances in Bioinformatics and. This book was released on 2006 with total page 388 pages. Available in PDF, EPUB and Kindle. Book excerpt: High-throughput sequencing and functional genomics technologies have given us a draft human genome sequence and have enabled large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, and gene expression profiles of normal and diseased tissues in different clinical states are rapidly being generated for human and model organisms. Bioinformatics is thus rapidly growing in importance in the annotation of genornic sequences, in the understanding of the interplay between genes and proteins, in the analysis of the genetic variability of species, and so on. This proceedings contains an up-to-date exchange of knowledge, ideas, and solutions to conceptual and practical issues of bioinformatics, by researchers, professionals, and industrial practitioners at the 4th Asia-Pacific Bioinformatics Conference held in Taipei in February 2006.
Book Synopsis Proceedings of the 5th Asia-Pacific Bioinformatics Conference by : David Sankoff
Download or read book Proceedings of the 5th Asia-Pacific Bioinformatics Conference written by David Sankoff and published by World Scientific. This book was released on 2007-01-12 with total page 388 pages. Available in PDF, EPUB and Kindle. Book excerpt: High-throughput sequencing and functional genomics technologies have given us the human genome sequence as well as those of other experimentally, medically, and agriculturally important species, and have enabled large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, structures, and gene expression profiles of normal and diseased tissues are being rapidly generated for human and model organisms. Bioinformatics is thus rapidly growing in importance in the annotation of genomic sequences; the understanding of the interplay among and between genes and proteins; the analysis of genetic variability of species; the identification of pharmacological targets; and the inference of evolutionary origins, mechanisms, and relationships. This proceedings volume contains an up-to-date exchange of knowledge, ideas, and solutions to conceptual and practical issues of bioinformatics by researchers, professionals, and industrial practitioners at the 5th Asia-Pacific Bioinformatics Conference held in Hong Kong in January 2007. Contents:Exploring Genomes of Distantly Related Mammals (J A Marshall Graves)Subtle Motif Discovery for Detection of DNA Regulatory Sites (M Comin & L Parida)Using Formal Concept Analysis for Microarray Data Comparison (V Choi et al.)Computing the Quartet Distance Between Evolutionary Trees of Bounded Degree (M Stissing et al.)A Randomized Algorithm for Comparing Sets of Phylogenetic Trees (S-J Sul & T L Williams)Exact and Heuristic Approaches for Identifying Disease-Associated SNP Motifs (G Huang et al.)The Distance Between Randomly Constructed Genomes (W Xu)Semi-supervised Pattern Learning for Extracting Relations from Bioscience Texts (S Ding et al.)Fast Structural Similarity Search Based on Topology String Matching (S-H Park et al.)and other papers Readership: Academics, researchers, and graduate students in bioinformatics and computer science. Keywords:Bioinformatics;Computational Biology;Systems Biology;Statistical Modeling;Comparative Genomics;Evolutionary Biology;Data Mining;Structural Bioinformatics;Statistical Genetics
Book Synopsis Proceedings of the 5th Asia-Pacific Bioinformatics Conference by : David Sankoff
Download or read book Proceedings of the 5th Asia-Pacific Bioinformatics Conference written by David Sankoff and published by World Scientific. This book was released on 2007 with total page 391 pages. Available in PDF, EPUB and Kindle. Book excerpt: High-throughput sequencing and functional genomics technologies have given us the human genome sequence as well as those of other experimentally, medically, and agriculturally important species, and have enabled large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, structures, and gene expression profiles of normal and diseased tissues are being rapidly generated for human and model organisms. Bioinformatics is thus rapidly growing in importance in the annotation of genomic sequences; the understanding of the interplay among and between genes and proteins; the analysis of genetic variability of species; the identification of pharmacological targets; and the inference of evolutionary origins, mechanisms, and relationships. This proceedings volume contains an up-to-date exchange of knowledge, ideas, and solutions to conceptual and practical issues of bioinformatics by researchers, professionals, and industrial practitioners at the 5th Asia-Pacific Bioinformatics Conference held in Hong Kong in January 2007.
Book Synopsis Proceedings of the 5th Asia-Pacific Bioinformatics Conference by : David Sankoff
Download or read book Proceedings of the 5th Asia-Pacific Bioinformatics Conference written by David Sankoff and published by . This book was released on 2007-01-01 with total page 374 pages. Available in PDF, EPUB and Kindle. Book excerpt: High-throughput sequencing and functional genomics technologies have given us the human genome sequence as well as those of other experimentally, medically and agriculturally important species, and have enabled large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, structures and gene expression profiles of normal and diseased tissues are rapidly being generated for human and model organisms. Bioinformatics is thus rapidly growing in importance in the annotation of genomic sequences, in the understanding of the interplay among and between genes and proteins, in the analysis the genetic variability of species, in the identification of pharmacological targets and in the inference of evolutionary origins, mechanisms and relationships. This proceedings contains an up-to-date exchange of knowledge, ideas, and solutions to conceptual and practical issues of bioinformatics, by researchers, professionals, and industrial practitioners at the 5th Asia-Pacific Bioinformatics Conference held in Hong Kong in January 2007.
Book Synopsis Regulatory Genomics - Proceedings Of The 3rd Annual Recomb Workshop by : Hon Wai Leong
Download or read book Regulatory Genomics - Proceedings Of The 3rd Annual Recomb Workshop written by Hon Wai Leong and published by World Scientific. This book was released on 2008-07-07 with total page 144 pages. Available in PDF, EPUB and Kindle. Book excerpt: Research in the field of gene regulation is evolving rapidly in the ever-changing scientific environment. Advances in microarray techniques and comparative genomics have enabled more comprehensive studies of regulatory genomics. The study of genomic binding locations of transcription factors has enabled a more comprehensive modeling of regulatory networks. In addition, complete genomic sequences and comparison of numerous related species have demonstrated the conservation of non-coding DNA sequences, which often provide evidence for cis-regulatory binding sites. Systematic methods to decipher the regulatory mechanism are also crucial for corroborating these regulatory networks; key to these methods are motif discovery algorithms that can help predict cis-regulatory elements. These DNA-motif discovery programs are becoming more sophisticated and are beginning to leverage evidence from comparative genomics. These topics and more were discussed at the 3rd Annual RECOMB Workshop on Regulatory Genomics, which brought together more than 90 attendees and included about 22 excellent talks from leading researchers in the field. This proceedings volume contains ten selected, original manuscripts that were presented during the workshop./a
Book Synopsis Computational Systems Bioinformatics by : Peter Markstein
Download or read book Computational Systems Bioinformatics written by Peter Markstein and published by World Scientific. This book was released on 2006-07-28 with total page 416 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume contains about 40 papers covering many of the latest developments in the fast-growing field of bioinformatics. The contributions span a wide range of topics, including computational genomics and genetics, protein function and computational proteomics, the transcriptome, structural bioinformatics, microarray data analysis, motif identification, biological pathways and systems, and biomedical applications. There are also abstracts from the keynote addresses and invited talks. The papers cover not only theoretical aspects of bioinformatics but also delve into the application of new methods, with input from computation, engineering and biology disciplines. This multidisciplinary approach to bioinformatics gives these proceedings a unique viewpoint of the field. Contents:Exploring the Ocean's Microbes: Sequencing the Seven Seas (M E Frazier et al.)Protein Network Comparative Genomics (T Ideker)Bioinformatics at Microsoft Research (S Mercer)Protein Fold Recognition Using Gradient Boost Algorithm (F Jiao et al.)Efficient Annotation of Non-Coding RNA Structures Including Pseudoknots via Automated Filters (C Liu et al.)Efficient Generalized Matrix Approximations for Biomarker Discovery and Visualization in Gene Expression Data (W Li et al.)Sorting Genomes by Translocations and Deletions (X Qi et al.)Detection of Cleavage Sites for HIV-1 Protease in Native Proteins (L You)Identifying Biological Pathways via Phase Decomposition and Profile Extraction (Y Zhang & Z Deng)Complexity and Scoring Function of MS/MS Peptide De Novo Sequencing (C Xu & B Ma)Simulating In Vitro Epithelial Morphogenesis in Multiple Environments (M R Grant et al.)and other papers Readership: Research and application community in bioinformatics, systems biology, medicine, pharmacology and biotechnology. A useful reference for graduate researchers in bioinformatics and computational biology. Keywords:Bioinformatics;Computational Biology;Genomics;Proteomics;Structural Biology;Biological Pathways;Phylogenetics;Systems BiologyKey Features:The CSB meetings accepts only the highest quality research paper, with a paper-acceptance rate of below 20%The CSB meeting represents an unique bioinformatics conference in which papers blend bioinformatic tool development with in silico biologyCSB meetings have become one of the most well attended bioinformatics conferencesCSB proceedings are indexed by Medline
Book Synopsis Applications of Fuzzy Logic in Bioinformatics by : Dong Xu
Download or read book Applications of Fuzzy Logic in Bioinformatics written by Dong Xu and published by World Scientific. This book was released on 2008-08-11 with total page 248 pages. Available in PDF, EPUB and Kindle. Book excerpt: Many biological systems and objects are intrinsically fuzzy as their properties and behaviors contain randomness or uncertainty. In addition, it has been shown that exact or optimal methods have significant limitation in many bioinformatics problems. Fuzzy set theory and fuzzy logic are ideal to describe some biological systems/objects and provide good tools for some bioinformatics problems. This book comprehensively addresses several important bioinformatics topics using fuzzy concepts and approaches, including measurement of ontological similarity, protein structure prediction/analysis, and microarray data analysis. It also reviews other bioinformatics applications using fuzzy techniques. Contents:Introduction to BioinformaticsIntroduction to Fuzzy Set Theory and Fuzzy LogicFuzzy Similarities in OntologiesFuzzy Logic in Structural BioinformaticsApplication of Fuzzy Logic in Microarray Data AnalysesOther ApplicationsSummary and Outlook Readership: Postdoctoral fellows, students, senior investigators and professional practitioners/bioinformatics experts. Also used as a textbook for upper undergraduates and graduates in bioinformatics. Keywords:Bioinformatics;Fuzzy Set Theory;Fuzzy Logic;Clustering;Ontology;Protein StructureKey Features:Bridges two important research areas — computational intelligence and bioinformaticsChapters are connected seamlessly through a systematic design of the overall structure of the bookProvides appendices on fundamental biological concepts and online resources related to the bookJames Keller, a renowned scientist in computational intelligence, pioneered a number of methods in fuzzy set theoryDong Xu, a well-known researcher in bioinformatics, developed several widely-used bioinformatics tools
Book Synopsis Computational Methods for Understanding Bacterial and Archaeal Genomes by : Ying Xu
Download or read book Computational Methods for Understanding Bacterial and Archaeal Genomes written by Ying Xu and published by World Scientific. This book was released on 2008 with total page 494 pages. Available in PDF, EPUB and Kindle. Book excerpt: Over 500 prokaryotic genomes have been sequenced to date, and thousands more have been planned for the next few years. While these genomic sequence data provide unprecedented opportunities for biologists to study the world of prokaryotes, they also raise extremely challenging issues such as how to decode the rich information encoded in these genomes. This comprehensive volume includes a collection of cohesively written chapters on prokaryotic genomes, their organization and evolution, the information they encode, and the computational approaches needed to derive such information. A comparative view of bacterial and archaeal genomes, and how information is encoded differently in them, is also presented. Combining theoretical discussions and computational techniques, the book serves as a valuable introductory textbook for graduate-level microbial genomics and informatics courses.
