Potential Anticancer Activity Via Inhibition of Telomerase Binding: Investigation of Stabilization Factors for G-Quadruplex Structures

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ISBN 13 :
Total Pages : 0 pages
Book Rating : 4.:/5 (143 download)

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Book Synopsis Potential Anticancer Activity Via Inhibition of Telomerase Binding: Investigation of Stabilization Factors for G-Quadruplex Structures by : Tamaki Chiba

Download or read book Potential Anticancer Activity Via Inhibition of Telomerase Binding: Investigation of Stabilization Factors for G-Quadruplex Structures written by Tamaki Chiba and published by . This book was released on 2017 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Telomerase activity is expressed in approximately 85 % of human cancer cells. The overexpression of telomerase in cancer cells is sufficient enough to maintain the length of telomeres and overcome cellular senescence or apoptosis, which explains the immortal feature of cancer cells. In order to cease the immortality of cancer cells caused by telomerase, a strategy that focuses on the inhibition of telomerase activity has been developed. Due to the feature of G-rich human telomeric sequence (T2AG3 repeats), the telomeres can form a G-quadruplex secondary structure whose steric hindrance may disrupt the telomerase binding. In this project, in order to prevent telomerase from accessing and elongating the telomeres, we investigated the factors that stabilize G-quadruplex structures by using UV-Vis Spectroscopy, Fluorescence Spectroscopy and Surface Plasmon Resonance (SPR). We showed that, among the monovalent cations, potassium maximized the stabilization. The stabilization of DNA G-quadruplex was further enhanced in the presence of ligands such as TmPyP4 and its manganese derivative, Mn(Ⅲ)TmPyP4. We also compared the stability of DNA quadruplex and RNA quadruplex. Interestingly, RNA quadruplex showed greater thermodynamic stability than DNA quadruplex under the same experimental conditions. However, RNA quadruplex was not stabilized by the porphyrin ligands we used. Although the conformation analysis of G-quadruplex and the modeling of G-quadruplex ligands are still under investigation, this project gives an insight into improving the stability of both DNA and RNA quadruplex structures.

Stabilization of G-quadruplex Structures by Organometallic Complexes

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ISBN 13 :
Total Pages : 0 pages
Book Rating : 4.:/5 (143 download)

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Book Synopsis Stabilization of G-quadruplex Structures by Organometallic Complexes by : Hang Thanh Hoang

Download or read book Stabilization of G-quadruplex Structures by Organometallic Complexes written by Hang Thanh Hoang and published by . This book was released on 2018 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Telomere shortening is primarily involved in cell death and cellular aging. However, telomerase can reverse the shortening process and allow cells to overcome apoptosis. Telomerase activity is expressed in 85-90% of cancer cells. Binding of this enzyme can be prevented by the formation of G-quadruplex structures, which include stacks of G-tetrads formed by telomeric TTAGGG tandem repeats. Therefore, G-quadruplex stability is crucial to the inhibition of telomerase activity and ligand-induced quadruplex stabilization emerges as a potential chemotherapeutic pathway due to its high selectivity and specificity towards cancer cells. Our project aims to understand the stabilization mechanism of DNA/RNA G-quadruplex by organometallic compounds using UV/Vis spectroscopy and Isothermal Titration Calorimetry (ITC). We have shown that quadruplex stability is increased by potassium ions and further enhanced by the cationic porphyrin ligands TMPyP4 and Mn(III) TMPyP4. We also found that the anionic copper (II) phthalocyanine Cu-APC complex, discovered by the Sugimoto group, potentially interacts with both DNA and RNA quadruplexes. The nonionic benzothiophene platinum(II) complex L3, synthesized by the Anderson lab, also interacts with DNA G- quadruplex and potentially stabilizes the structures. Our studies have provided insights into improving quadruplex stability by organometallic ligands and how their stabilizing effects differ due to structural differences.

Quadruplex Nucleic Acids

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Publisher : Royal Society of Chemistry
ISBN 13 : 1847555292
Total Pages : 317 pages
Book Rating : 4.8/5 (475 download)

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Book Synopsis Quadruplex Nucleic Acids by : Stephen Neidle

Download or read book Quadruplex Nucleic Acids written by Stephen Neidle and published by Royal Society of Chemistry. This book was released on 2007-10-31 with total page 317 pages. Available in PDF, EPUB and Kindle. Book excerpt: Guanine rich DNA has been known for decades to form unusual structures, although their biological relevance was little understood. Recent advances have demonstrated that quadruplex structures can play a role in gene expression and provide opportunities for a new class of anticancer therapeutics. A number of quadruplex-specific proteins have also been discovered. Quadruplex Nucleic Acids discusses all aspects of the fundamentals of quadruplex structures, including their structure in solution and the crystalline state, the kinetics of quadruplex folding, and the role of cations in structure and stability. The biology of quadruplexes and G-rich genomic regions and G-quartets in supramolecular chemistry and nanoscience are also considered. Surveying the current state of knowledge, and with contributions from leading experts, this is the first comprehensive review of this rapidly growing area. Quadruplex Nucleic Acids is ideal for researchers interested in areas related to chemistry, chemical biology, medicinal chemistry, molecular pharmacology, and structural and molecular biology.

Protein-Nucleic Acid Interactions

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Publisher : Royal Society of Chemistry
ISBN 13 : 0854042725
Total Pages : 417 pages
Book Rating : 4.8/5 (54 download)

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Book Synopsis Protein-Nucleic Acid Interactions by : Phoebe A. Rice

Download or read book Protein-Nucleic Acid Interactions written by Phoebe A. Rice and published by Royal Society of Chemistry. This book was released on 2008-05-22 with total page 417 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides both in-depth background and up-to-date information in this area. The chapters are organized by general themes and principles, written by experts who illustrate topics with current findings. Topics covered include: - the role of ions and hydration in protein-nucleic acid interactions - transcription factors and combinatorial specificity - indirect readout of DNA sequence - single-stranded nucleic acid binding proteins - nucleic acid junctions and proteins, - RNA protein recognition - recognition of DNA damage. It will be a key reference for both advanced students and established scientists wishing to broaden their horizons.

Characterizing and Targeting Unique Features of Telomeres and Telomere Maintenance

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ISBN 13 :
Total Pages : pages
Book Rating : 4.:/5 (964 download)

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Book Synopsis Characterizing and Targeting Unique Features of Telomeres and Telomere Maintenance by : Johanna Mancini

Download or read book Characterizing and Targeting Unique Features of Telomeres and Telomere Maintenance written by Johanna Mancini and published by . This book was released on 2016 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: "Telomere maintenance, achieved by the binding of protective shelterin capping proteins and by either telomerase or homologous recombination-based alternative lengthening of telomere (ALT) mechanisms, is critical for cell proliferation and survival. Loss of telomeric integrity or extensive telomere shortening activates DNA damage checkpoints, leading to the initiation of genomic instability, cell senescence, or death. Although telomerase is an attractive target for anti-cancer therapy, the lag associated with telomere shortening poses a challenge. An alternative approach is to modify telomere interactions with binding proteins (telomere uncapping) or to interfere with telomerase access. This can be accomplished through the use of G-quadruplex ligands that stabilize structures from single-stranded G-rich 3′-telomere end (G-quadruplex) folding, which cannot be elongated by telomerase and which can mediate rapid anti-proliferative effects by telomere uncapping. Inhibition of telomerase may also cause the onset of ALT. Despite its potential to serve as a target for anti-cancer therapy, the ALT pathway remains poorly characterized. The ALT pathway maintains telomeres using homologous recombination, which also occurs throughout the genome in order to repair sites of DNA damage due to or resulting in replication fork stalling. Although ALT is often associated with high levels of small ubiquitin-related modifier (SUMO), decreased levels of SUMO1 were observed in a telomerase-positive human breast cancer cell line harboring an ALT phenotype. In yeast, sumoylation of the DNA replication/repair machinery has been shown to recruit an anti-recombinogenic helicase. Recent identification of the human orthologue, Proliferating Cell Nuclear Antigen (PCNA)-Interacting Protein (PARI), led us to investigate the role of sumoylation in the regulation of ALT and to suggest a role for PARI in regulating telomeric recombination in ALT cells.Our results confirm that G-quadruplex ligands PIN, PIP, PII, PIQ, SIP, and CLIP can inhibit telomerase activity in vitro. Treatment with PIP is able to significantly reduce proliferation of A549 lung cancer cells and to cause a significant decrease in the average telomere length of these cells. Although the growth of normal primary cells with a limited capacity for replication was also affected, their telomere length of was not significantly decreased. While treatment with PIP failed to induce apoptosis and DNA damage localized at the telomere; positive staining for [beta]-galactosidase, in telomerase positive A549 and Huh7 cells, confirmed the onset of cellular senescence. Interestingly, expression of the inactive -[beta] splice variant of hTERT was increased after short-term treatment with PIP. These results suggest that the observed anti-proliferative effects are unlikely due to telomere uncapping but rather due to the inhibition of telomerase activity, leading to cellular senescence. Preliminary results investigating the role of PARI at the telomere suggest it is capable of repressing homologous recombination. Overexpression of PARI inhibited homologous recombination at telomeres, observed by a decrease in C-circle expression, the most robust method of measuring ALT. Moreover, PARI containing mutations in critical SUMO- ([DELTA]SIM) and PCNA- ([DELTA]PIP) interacting sites were less effective at inhibiting homologous recombination activity; thus supporting the characterization of PARI and its potential role in telomeric recombination. These studies validate the development of novel and specific therapeutic ligands that target G-quadruplex structures at the telomere. Moreover, they identify potential novel targets of the ALT pathway, providing evidence that PARI can inhibit recombination at the telomere; thus improving our understanding of the mechanisms regulating telomere maintenance." --

Crystallographic and Biophysical Studies of Telomeric RNA and DNA G-quadruplex-drug Complexes

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ISBN 13 :
Total Pages : 492 pages
Book Rating : 4.:/5 (926 download)

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Book Synopsis Crystallographic and Biophysical Studies of Telomeric RNA and DNA G-quadruplex-drug Complexes by :

Download or read book Crystallographic and Biophysical Studies of Telomeric RNA and DNA G-quadruplex-drug Complexes written by and published by . This book was released on 2012 with total page 492 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Telomeres and Telomerase in Cancer

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Publisher : Springer Science & Business Media
ISBN 13 : 1603278796
Total Pages : 375 pages
Book Rating : 4.6/5 (32 download)

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Book Synopsis Telomeres and Telomerase in Cancer by : Keiko Hiyama

Download or read book Telomeres and Telomerase in Cancer written by Keiko Hiyama and published by Springer Science & Business Media. This book was released on 2009-03-18 with total page 375 pages. Available in PDF, EPUB and Kindle. Book excerpt: Telomerase, an enzyme that maintains telomeres and endows eukaryotic cells with immortality, was first discovered in tetrahymena in 1985. In 1990s, it was proven that this enzyme also plays a key role in the infinite proliferation of human cancer cells. Now telomere and telomerase are widely accepted as important factors involved in cancer biology, and as promising diagnostic tools and therapeutic targets. Recently, role of telomerase in “cancer stem cells” has become another attractive story. Until now, there are several good books on telomere and telomerase focusing on biology in ciliates, yeasts, and mouse or basic sciences in human, providing basic scientists or students with updated knowledge.

G-Quadruplex DNA

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Publisher : Humana
ISBN 13 : 9781493956395
Total Pages : 276 pages
Book Rating : 4.9/5 (563 download)

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Book Synopsis G-Quadruplex DNA by : Peter Baumann

Download or read book G-Quadruplex DNA written by Peter Baumann and published by Humana. This book was released on 2016-08-23 with total page 276 pages. Available in PDF, EPUB and Kindle. Book excerpt: Recent work has revealed that stabilizing G-quadruplexes in telomeric DNA inhibits telomerase activity, providing impetus for the development of G-quartet-interacting drugs, while G-quartet-containing oligonucleotides have been recognized as a potent class of aptamers effective against STAT3 and other transcription factors implicated in oncogenesis, proving these guanine-quartets to be a vital and rich area for future study. In "G-Quadruplex DNA: Methods and Protocols", experts in the field present a collection of detailed techniques for studying G-quartet formation, dynamics, and molecular recognition. Written in the highly successful Methods in Molecular BiologyTM series format, chapters include brief introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and notes on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, "G-Quadruplex DNA: Methods and Protocols "promises to be a useful resource for those familiar with G-quartets as well as an easy entry point for those researchers from diverse fields who are just developing an interest in the exciting implications of G-quadruplex DNA.

Small-Molecule Transcription Factor Inhibitors in Oncology

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Publisher : Royal Society of Chemistry
ISBN 13 : 1782621458
Total Pages : 214 pages
Book Rating : 4.7/5 (826 download)

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Book Synopsis Small-Molecule Transcription Factor Inhibitors in Oncology by : Khondaker Miraz Rahman

Download or read book Small-Molecule Transcription Factor Inhibitors in Oncology written by Khondaker Miraz Rahman and published by Royal Society of Chemistry. This book was released on 2018-09-06 with total page 214 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book highlights recent progress in the development of small-molecule inhibitors of oncogenic transcription factors and is relevant for postgraduates, researchers and practitioners.

G-Quadruplex Nucleic Acids

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Publisher : Humana
ISBN 13 : 9781493996681
Total Pages : 437 pages
Book Rating : 4.9/5 (966 download)

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Book Synopsis G-Quadruplex Nucleic Acids by : Danzhou Yang

Download or read book G-Quadruplex Nucleic Acids written by Danzhou Yang and published by Humana. This book was released on 2020-09-07 with total page 437 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume covers the structures, properties, and functions of G-quadruplexes in a wide range of biological disciplines, including therapeutic intervention and biomaterial application. The chapters in this book explore a wide range of vital and new experimental techniques used in the study of G-quadruplexes. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Practical and cutting-edge, G-Quadruplex DNA: Methods and Protocols is a valuable resource for both novice and experienced researchers who work in biophysics, structural biology, computational biology, biochemistry, and molecular and cell biology, and who want to learn more about the potential roles and effects of G-quadruplex in these fields.

Small Molecule Microarrays: Methods and Protocols

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Publisher : Methods in Molecular Biology
ISBN 13 : 9781493982424
Total Pages : 274 pages
Book Rating : 4.9/5 (824 download)

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Book Synopsis Small Molecule Microarrays: Methods and Protocols by : Mahesh Uttamchandani

Download or read book Small Molecule Microarrays: Methods and Protocols written by Mahesh Uttamchandani and published by Methods in Molecular Biology. This book was released on 2018-12-05 with total page 274 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Medicinal Chemistry of Nucleic Acids

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Publisher : John Wiley & Sons
ISBN 13 : 0470596686
Total Pages : 477 pages
Book Rating : 4.4/5 (75 download)

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Book Synopsis Medicinal Chemistry of Nucleic Acids by : Li-He Zhang

Download or read book Medicinal Chemistry of Nucleic Acids written by Li-He Zhang and published by John Wiley & Sons. This book was released on 2011-08-30 with total page 477 pages. Available in PDF, EPUB and Kindle. Book excerpt: Complete, up-to-date coverage of the broad area of nucleic acid chemistry and biology Assembling contributions from a collection of authors with expertise in all areas of nucleic acids, medicinal chemistry, and therapeutic applications, Medicinal Chemistry of Nucleic Acids presents a thorough overview of nucleic acid chemistry—a rapidly evolving and highly challenging discipline directly responsible for the development of antiviral and antitumor drugs. This reliable resource delves into a multitude of subject areas involving the study of nucleic acids—such as the new advances in genome sequencing, and the processes for creating RNA interference (RNAi) based drugs—to assist pharmaceutical researchers in removing roadblocks that hinder their ability to predict drug efficacy. Offering the latest cutting-edge science in this growing field, Medicinal Chemistry of Nucleic Acids includes: In-depth coverage of the development and application of modified nucleosides and nucleotides in medicinal chemistry A close look at a large range of current topics on nucleic acid chemistry and biology Essential information on the use of nucleic acid drugs to treat diseases like cancer A thorough exploration of siRNA for RNAi and the regulation of microRNA, non-coding RNA (ncRNA), a newly developing and exciting research area Thorough in its approach and promising in its message, Medicinal Chemistry of Nucleic Acids probes the new domains of pharmaceutical research—and exposes readers to a wealth of new drug discovery opportunities emerging in the dynamic field of nucleic acid chemistry.

The Organic Chemistry of Drug Design and Drug Action

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Publisher : Elsevier
ISBN 13 : 0080513379
Total Pages : 650 pages
Book Rating : 4.0/5 (85 download)

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Book Synopsis The Organic Chemistry of Drug Design and Drug Action by : Richard B. Silverman

Download or read book The Organic Chemistry of Drug Design and Drug Action written by Richard B. Silverman and published by Elsevier. This book was released on 2012-12-02 with total page 650 pages. Available in PDF, EPUB and Kindle. Book excerpt: Standard medicinal chemistry courses and texts are organized by classes of drugs with an emphasis on descriptions of their biological and pharmacological effects. This book represents a new approach based on physical organic chemical principles and reaction mechanisms that allow the reader to extrapolate to many related classes of drug molecules. The Second Edition reflects the significant changes in the drug industry over the past decade, and includes chapter problems and other elements that make the book more useful for course instruction. New edition includes new chapter problems and exercises to help students learn, plus extensive references and illustrations Clearly presents an organic chemist's perspective of how drugs are designed and function, incorporating the extensive changes in the drug industry over the past ten years Well-respected author has published over 200 articles, earned 21 patents, and invented a drug that is under consideration for commercialization

Quadruplex Nucleic Acids As Targets For Medicinal Chemistry

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Publisher : Academic Press
ISBN 13 : 0128210184
Total Pages : 564 pages
Book Rating : 4.1/5 (282 download)

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Book Synopsis Quadruplex Nucleic Acids As Targets For Medicinal Chemistry by :

Download or read book Quadruplex Nucleic Acids As Targets For Medicinal Chemistry written by and published by Academic Press. This book was released on 2020-08-26 with total page 564 pages. Available in PDF, EPUB and Kindle. Book excerpt: The realisation that human, animal, viral and bacterial genomes all contain over-representation of higher-order quadruplex structures in regulatory and other pharmacologically-useful regions, has led to a large number of studies aimed at exploiting this findings for therapeutic and diagnostic purposes. Quadruplex-binding small molecules are starting to be evaluated in human clinical trials. Provides the authority and expertise of leading contributors from an international board of authors Presents the latest release in the Annual Reports in Medicinal Chemistry series

Telomerase Inhibition

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Publisher : Springer Science & Business Media
ISBN 13 : 1588296830
Total Pages : 197 pages
Book Rating : 4.5/5 (882 download)

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Book Synopsis Telomerase Inhibition by : Lucy Andrews

Download or read book Telomerase Inhibition written by Lucy Andrews and published by Springer Science & Business Media. This book was released on 2007-11-29 with total page 197 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume presents a compendium of the most recent and advanced methods applied to the rapidly expanding field of telomerase inhibition. The techniques described provide the researcher with a diverse and comprehensive set of tools for the study of telomerase inhibition. The volume is aimed at biochemists, molecular biologists, cancer researchers, and geneticists.

Ferroptosis in cancer and beyond

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Publisher : Frontiers Media SA
ISBN 13 : 2832513425
Total Pages : 452 pages
Book Rating : 4.8/5 (325 download)

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Book Synopsis Ferroptosis in cancer and beyond by : Yanqing Liu

Download or read book Ferroptosis in cancer and beyond written by Yanqing Liu and published by Frontiers Media SA. This book was released on 2023-02-06 with total page 452 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Drug-Nucleic Acid Interactions

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Publisher : Elsevier
ISBN 13 : 0080496903
Total Pages : 740 pages
Book Rating : 4.0/5 (84 download)

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Book Synopsis Drug-Nucleic Acid Interactions by :

Download or read book Drug-Nucleic Acid Interactions written by and published by Elsevier. This book was released on 2001-07-31 with total page 740 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume consolidates the key methods for studying ligand-nucleic acid interactions into a convenient source. Techniques that are examined range from biophysical and chemical approaches to methods rooted in molecular and cell biology.