Plant Metabolic Flux Analysis

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Plant Respiration: Metabolic Fluxes and Carbon Balance

Author : Guillaume Tcherkez
Publisher : Springer
ISBN 13 : 3319687034
Total Pages : 334 pages
Book Rating : 4.3/5 (196 download)

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Book Synopsis Plant Respiration: Metabolic Fluxes and Carbon Balance by : Guillaume Tcherkez

Download or read book Plant Respiration: Metabolic Fluxes and Carbon Balance written by Guillaume Tcherkez and published by Springer. This book was released on 2018-02-20 with total page 334 pages. Available in PDF, EPUB and Kindle. Book excerpt: There are currently intense efforts devoted to understand plant respiration (from genes toecosystems) and its regulatory mechanisms; this is because respiratory CO2 productionrepresents a substantial carbon loss in crops and in natural ecosystems. Thus, in addition tomanipulating photosynthesis to increase plant biomass production, minimization ofrespiratory loss should be considered in plant science and engineering. However, respiratorymetabolic pathways are at the heart of energy and carbon skeleton production and therefore, itis an essential component of carbon metabolism sustaining key processes such asphotosynthesis. The overall goal of this book is to provide an insight in such interactions aswell as an up-to-date view on respiratory metabolism, taking advantage of recent advancesand concepts, from fluxomics to natural isotopic signal of plant CO2 efflux. It is thus a nonoverlapping,complement to Volume 18 in this series (Plant Respiration From Cell toEcosystem) which mostly deals with mitochondrial electron fluxes and plant-scale respiratorylosses.

Metabolic Engineering

Author : Sang Yup Lee
Publisher : John Wiley & Sons
ISBN 13 : 352782345X
Total Pages : 1075 pages
Book Rating : 4.5/5 (278 download)

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Book Synopsis Metabolic Engineering by : Sang Yup Lee

Download or read book Metabolic Engineering written by Sang Yup Lee and published by John Wiley & Sons. This book was released on 2021-06-02 with total page 1075 pages. Available in PDF, EPUB and Kindle. Book excerpt: Learn more about foundational and advanced topics in metabolic engineering in this comprehensive resource edited by leaders in the field Metabolic Engineering: Concepts and Applications delivers a one-stop resource for readers seeking a complete description of the concepts, models, and applications of metabolic engineering. This guide offers practical insights into the metabolic engineering of major cell lines, including E. Coli, Bacillus and Yarrowia Lipolytica, and organisms, including human, animal, and plant). The distinguished editors also offer readers resources on microbiome engineering and the use of metabolic engineering in bioremediation. Written in two parts, Metabolic Engineering begins with the essential models and strategies of the field, like Flux Balance Analysis, Quantitative Flux Analysis, and Proteome Constrained Models. It also provides an overview of topics like Pathway Design, Metabolomics, and Genome Editing of Bacteria and Eukarya. The second part contains insightful descriptions of the practical applications of metabolic engineering, including specific examples that shed light on the topics within. In addition to subjects like the metabolic engineering of animals, humans, and plants, you’ll learn more about: Metabolic engineering concepts and a historical perspective on their development The different modes of analysis, including flux balance analysis and quantitative flux analysis An illuminating and complete discussion of the thermodynamics of metabolic pathways The Genome architecture of E. coli, as well as genome editing of both bacteria and eukarya An in-depth treatment of the application of metabolic engineering techniques to organisms including corynebacterial, bacillus, and pseudomonas, and more Perfect for students of biotechnology, bioengineers, and biotechnologists, Metabolic Engineering: Concepts and Applications also has a place on the bookshelves of research institutes, biotechnological institutes and industry labs, and university libraries. It's comprehensive treatment of all relevant metabolic engineering concepts, models, and applications will be of use to practicing biotechnologists and bioengineers who wish to solidify their understanding of the field.

Plant Metabolism

Author : Ganesh Sriram
Publisher :
ISBN 13 : 9781627036610
Total Pages : 318 pages
Book Rating : 4.0/5 (366 download)

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Book Synopsis Plant Metabolism by : Ganesh Sriram

Download or read book Plant Metabolism written by Ganesh Sriram and published by . This book was released on 2014 with total page 318 pages. Available in PDF, EPUB and Kindle. Book excerpt: In Plant Metabolism: Methods and Protocols, expert researchers in the field present the latest methods on quantitative analysis of plant metabolism. The methods focus on measurements, analyses and simulations of molecules, fluxes, and ultimately entire metabolic pathways and networks. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials, reagents, or software, step-by-step, readily reproducible laboratory protocols, and key tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Plant Metabolism: Methods and Protocols seeks to benefit scientists ranging from plant biology, metabolic engineering, and biotechnology.

Plant Metabolic Engineering

Author : Vladimir Shulaev
Publisher : Humana
ISBN 13 : 9781071618240
Total Pages : 0 pages
Book Rating : 4.6/5 (182 download)

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Book Synopsis Plant Metabolic Engineering by : Vladimir Shulaev

Download or read book Plant Metabolic Engineering written by Vladimir Shulaev and published by Humana. This book was released on 2022-12-01 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume looks at the latest techniques used by researchers to study various aspects of plant metabolic engineering. The chapters in this book cover topics such as bioinformatics tools used to discover new genes and pathways; heterologous expression of biosynthetic genes in plant and microbial systems; and omics technologies, such as transcriptomics, proteomics, metabolomics, and data analysis. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Cutting-edge and comprehensive, Plant Metabolic Engineering: Methods and Protocols is a valuable resource for biologists, chemists, biotechnologists, students, and broad cohorts of researchers who works in the fields of plant metabolism and metabolic engineering.

Metabolic Engineering

Author : Jens Nielsen
Publisher : Springer
ISBN 13 : 3540453008
Total Pages : 193 pages
Book Rating : 4.5/5 (44 download)

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Book Synopsis Metabolic Engineering by : Jens Nielsen

Download or read book Metabolic Engineering written by Jens Nielsen and published by Springer. This book was released on 2003-07-03 with total page 193 pages. Available in PDF, EPUB and Kindle. Book excerpt: Metabolic engineering is a rapidly evolving field that is being applied for the optimization of many different industrial processes. In this issue of Advances in Biochemical Engineering/Biotechnology, developments in different areas of metabolic engineering are reviewed. The contributions discuss the application of metabolic engineering in the improvement of yield and productivity - illustrated by amino acid production and the production of novel compounds - in the production of polyketides and extension of the substrate range - and in the engineering of S. cerevisiae for xylose metabolism, and the improvement of a complex biotransformation process.

Regulation of Primary Metabolic Pathways in Plants

Author : Phytochemical Society of Europe
Publisher : Springer Science & Business Media
ISBN 13 : 9780792354949
Total Pages : 332 pages
Book Rating : 4.3/5 (549 download)

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Book Synopsis Regulation of Primary Metabolic Pathways in Plants by : Phytochemical Society of Europe

Download or read book Regulation of Primary Metabolic Pathways in Plants written by Phytochemical Society of Europe and published by Springer Science & Business Media. This book was released on 1999 with total page 332 pages. Available in PDF, EPUB and Kindle. Book excerpt: Papers from a January 1997 conference held at St. Hugh's College, Oxford, review progress in the area of primary plant metabolism, and highlight the extent to which molecular techniques now influence the investigation and understanding of plant metabolism. Emphasis is centered on processes related to dominant pathways of carbohydrate production and utilization, and material is arranged to reflect the current focus of researchers on three areas of investigation: molecular architecture of selected enzymes of primary metabolism; integration of metabolism between organelles, cells, tissues, and organs; and manipulation of major pathways of carbohydrate metabolism. Annotation copyrighted by Book News, Inc., Portland, OR

Cyanobacteria Biotechnology

Author : Paul Hudson
Publisher : John Wiley & Sons
ISBN 13 : 352782491X
Total Pages : 560 pages
Book Rating : 4.5/5 (278 download)

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Book Synopsis Cyanobacteria Biotechnology by : Paul Hudson

Download or read book Cyanobacteria Biotechnology written by Paul Hudson and published by John Wiley & Sons. This book was released on 2021-04-20 with total page 560 pages. Available in PDF, EPUB and Kindle. Book excerpt: Unites a biological and a biotechnological perspective on cyanobacteria, and includes the industrial aspects and applications of cyanobacteria Cyanobacteria Biotechnology offers a guide to the interesting and useful features of cyanobacteria metabolism that keeps true to a biotechnology vision. In one volume the book brings together both biology and biotechnology to illuminate the core acpects and principles of cyanobacteria metabolism. Designed to offer a practical approach to the metabolic engineering of cyanobacteria, the book contains relevant examples of how this metabolic "module" is currently being engineered and how it could be engineered in the future. The author includes information on the requirements and real-world experiences of the industrial applications of cyanobacteria. This important book: Brings together biology and biotechnology in order to gain insight into the industrial relevant topic of cyanobacteria Introduces the key aspects of the metabolism of cyanobacteria Presents a grounded, practical approach to the metabolic engineering of cyanobacteria Offers an analysis of the requirements and experiences for industrial cyanobacteria Provides a framework for readers to design their own processes Written for biotechnologists, microbiologists, biologists, biochemists, Cyanobacteria Biotechnology provides a systematic and clear volume that brings together the biological and biotechnological perspective on cyanobacteria.

Photorespiration

Author : Alisdair R. Fernie
Publisher : Humana Press
ISBN 13 : 9781493972241
Total Pages : 274 pages
Book Rating : 4.9/5 (722 download)

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Book Synopsis Photorespiration by : Alisdair R. Fernie

Download or read book Photorespiration written by Alisdair R. Fernie and published by Humana Press. This book was released on 2017-08-19 with total page 274 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume presents a comprehensive overview of contemporary methods to analyze photorespiration in higher plants. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Photorespiration: Methods and Protocols aims to ensure successful results in the further study of this vital field.

Synthetic Biology of Cyanobacteria

Author : Weiwen Zhang
Publisher : Springer
ISBN 13 : 9811308543
Total Pages : 357 pages
Book Rating : 4.8/5 (113 download)

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Book Synopsis Synthetic Biology of Cyanobacteria by : Weiwen Zhang

Download or read book Synthetic Biology of Cyanobacteria written by Weiwen Zhang and published by Springer. This book was released on 2018-08-08 with total page 357 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume highlights recent breakthroughs in the interdisciplinary areas of synthetic biology, metabolic engineering and bioprocess engineering for the production of green chemicals. It also presents practical experimental and computational tools for the design, construction and manipulation of cyanobacteria cell factories. The respective contributions cover new technologies in the field, such as novel genetic transformation techniques and bioinformatics analysis methods and address various aspects of cyanobacterial synthetic biology, offering a valuable resource for students and researchers in the fields of industry microbiology and biomedical engineering.

Yeast Metabolic Engineering

Author : Valeria Mapelli
Publisher : Humana Press
ISBN 13 : 9781493905621
Total Pages : 0 pages
Book Rating : 4.9/5 (56 download)

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Book Synopsis Yeast Metabolic Engineering by : Valeria Mapelli

Download or read book Yeast Metabolic Engineering written by Valeria Mapelli and published by Humana Press. This book was released on 2014-04-18 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Yeast Metabolic Engineering: Methods and Protocols provides the widely established basic tools used in yeast metabolic engineering, while describing in deeper detail novel and innovative methods that have valuable potential to improve metabolic engineering strategies in industrial biotechnology applications. Beginning with an extensive section on molecular tools and technology for yeast engineering, this detailed volume is not limited to methods for Saccharomyces cerevisiae, but describes tools and protocols for engineering other yeasts of biotechnological interest, such as Pichia pastoris, Hansenula polymorpha and Zygosaccharomyces bailii. Tools and technologies for the investigation and determination of yeast metabolic features are described in detail as well as metabolic models and their application for yeast metabolic engineering, while a chapter describing patenting and regulations with a special glance at yeast biotechnology closes the volume. Written in the highly successful Methods in Molecular Biology series format, most chapters include an introduction to their respective topic, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols and tips on troubleshooting and avoiding known pitfalls. Comprehensive and authoritative, Yeast Metabolic Engineering: Methods and Protocols aims to familiarize researchers with the current state of these vital and increasingly useful technologies.

Metabolomics in Practice

Author : Michael Lämmerhofer
Publisher : John Wiley & Sons
ISBN 13 : 3527655883
Total Pages : 423 pages
Book Rating : 4.5/5 (276 download)

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Book Synopsis Metabolomics in Practice by : Michael Lämmerhofer

Download or read book Metabolomics in Practice written by Michael Lämmerhofer and published by John Wiley & Sons. This book was released on 2013-02-14 with total page 423 pages. Available in PDF, EPUB and Kindle. Book excerpt: Unlike other handbooks in this emerging field, this guide focuses on the challenges and critical parameters in running a metabolomics study, including such often-neglected issues as sample preparation, choice of separation and detection method, recording and evaluating data as well as method validation. By systematically covering the entire workflow, from sample preparation to data processing, the insight and advice offered here helps to clear the hurdles in setting up and running a successful analysis, resulting in high-quality data from every experiment. Based on more than a decade of practical experience in developing, optimizing and validating metabolomics approaches as a routine technology in the academic and industrial research laboratory, the lessons taught here are highly relevant for all systems-level approaches, whether in systems biology, biotechnology, toxicology or pharmaceutical sciences. From the Contents: * Sampling and Sample Preparation in Microbial Metabolomics * Tandem Mass Spectrometry Hyphenated with HPLC and UHPLC for Targeted Metabolomics * GC-MS, LC-MS, CE-MS and Ultrahigh Resolution MS (FTICR-MS) in Metabolomics * NMR-based metabolomics analysis * Potential of Microfluidics and Single Cell Analysis in Metabolomics * Data Processing in Metabolomics * Validation and Measurement Uncertainty in Metabolomic Studies * Metabolomics and its Role in the Study of Mammalian Systems and in Plant Sciences * Metabolomics in Biotechnology and Nutritional Metabolomics and more.

Metabolomics

Author : Wolfram Weckwerth
Publisher : Springer Science & Business Media
ISBN 13 : 1597452440
Total Pages : 290 pages
Book Rating : 4.5/5 (974 download)

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Book Synopsis Metabolomics by : Wolfram Weckwerth

Download or read book Metabolomics written by Wolfram Weckwerth and published by Springer Science & Business Media. This book was released on 2008-02-04 with total page 290 pages. Available in PDF, EPUB and Kindle. Book excerpt: Metabolomics: Methods and Protocols examines the state-of-the-art in metabolomic analysis. Leading researchers in the field present protocols for the application of complementary analytical methods, such as gas chromatography-mass spectrometry (GC-MS). Metabolomics: Methods and Protocols contains forward-looking protocols, which provide the essential groundwork for future efforts in elucidating the structure of the unknowns detected in metabolomic studies.

Methodologies for Metabolomics

Author : Norbert W. Lutz
Publisher : Cambridge University Press
ISBN 13 : 0521765900
Total Pages : 641 pages
Book Rating : 4.5/5 (217 download)

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Book Synopsis Methodologies for Metabolomics by : Norbert W. Lutz

Download or read book Methodologies for Metabolomics written by Norbert W. Lutz and published by Cambridge University Press. This book was released on 2013-01-21 with total page 641 pages. Available in PDF, EPUB and Kindle. Book excerpt: Metabolomics, the global characterisation of the small molecule complement involved in metabolism, has evolved into a powerful suite of approaches for understanding the global physiological and pathological processes occurring in biological organisms. The diversity of metabolites, the wide range of metabolic pathways and their divergent biological contexts require a range of methodological strategies and techniques. Methodologies for Metabolomics provides a comprehensive description of the newest methodological approaches in metabolomic research. The most important technologies used to identify and quantify metabolites, including nuclear magnetic resonance and mass spectrometry, are highlighted. The integration of these techniques with classical biological methods is also addressed. Furthermore, the book presents statistical and chemometric methods for evaluation of the resultant data. The broad spectrum of topics includes a vast variety of organisms, samples and diseases, ranging from in vivo metabolomics in humans and animals to in vitro analysis of tissue samples, cultured cells and biofluids.

Bacterial Cellular Metabolic Systems

Author : K. Shimizu
Publisher : Elsevier
ISBN 13 : 1908818204
Total Pages : 497 pages
Book Rating : 4.9/5 (88 download)

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Book Synopsis Bacterial Cellular Metabolic Systems by : K. Shimizu

Download or read book Bacterial Cellular Metabolic Systems written by K. Shimizu and published by Elsevier. This book was released on 2013-03-26 with total page 497 pages. Available in PDF, EPUB and Kindle. Book excerpt: The metabolic regulation of a cell system is of critical importance in systems biology, and a robust model of these mechanisms is essential in predicting the effects on the metabolism of both the culture environment and the knockout of specific genes. Bacterial cellular metabolic systems focuses on this highly topical subject in relation to culture environment and provides a detailed analysis from gene level to metabolic level regulation, as well as offering a discussion of the most recent modelling approaches. The book begins with an introduction to metabolic mechanisms and to the metabolic regulation of a cell, before moving on to discussing the action of global regulators in response to a specific culture environment. The second half of the book examines conventional flux balance analysis and its applications, 13C-metabolic flux analysis, and the effect of a specific gene knockout on the metabolism. - Comprehensive account of metabolic regulation via global regulators in response to changes in the culture environment - Basic formulation of 13C-metabolic flux analysis based on 13C-labelling experiments - Systems biology approach for the modelling and computer simulation of the main metabolic pathways of a cell system

Plant Lipid Metabolism

Author : J.C. Kader
Publisher : Springer Science & Business Media
ISBN 13 : 9401583943
Total Pages : 598 pages
Book Rating : 4.4/5 (15 download)

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Book Synopsis Plant Lipid Metabolism by : J.C. Kader

Download or read book Plant Lipid Metabolism written by J.C. Kader and published by Springer Science & Business Media. This book was released on 2013-04-18 with total page 598 pages. Available in PDF, EPUB and Kindle. Book excerpt: A collection of papers that comprehensively describe the major areas of research on lipid metabolism of plants. State-of-the-art knowledge about research on fatty acid and glycerolipid biosynthesis, isoprenoid metabolism, membrane structure and organization, lipid oxidation and degradation, lipids as intracellular and extracellular messengers, lipids and environment, oil seeds and gene technology is reviewed. The different topics covered show that modern tools of plant cellular and molecular biology, as well as molecular genetics, have been recently used to characterize several key enzymes of plant lipid metabolism (in particular, desaturases, thioesterases, fatty acid synthetase) and to isolate corresponding cDNAs and genomic clones, allowing the use of genetic engineering methods to modify the composition of membranes or storage lipids. These findings open fascinating perspectives, both for establishing the roles of lipids in membrane function and intracellular signalling and for adapting the composition of seed oil to the industrial needs. This book will be a good reference source for research scientists, advanced students and industrialists wishing to follow the considerable progress made in recent years on plant lipid metabolism and to envision the new opportunities offered by genetic engineering for the development of novel oil seeds.

Heat Stress Tolerance in Plants

Author : Shabir H. Wani
Publisher : John Wiley & Sons
ISBN 13 : 1119432367
Total Pages : 315 pages
Book Rating : 4.1/5 (194 download)

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Book Synopsis Heat Stress Tolerance in Plants by : Shabir H. Wani

Download or read book Heat Stress Tolerance in Plants written by Shabir H. Wani and published by John Wiley & Sons. This book was released on 2020-04-06 with total page 315 pages. Available in PDF, EPUB and Kindle. Book excerpt: Demystifies the genetic, biochemical, physiological, and molecular mechanisms underlying heat stress tolerance in plants Heat stress—when high temperatures cause irreversible damage to plant function or development—severely impairs the growth and yield of agriculturally important crops. As the global population mounts and temperatures continue to rise, it is crucial to understand the biochemical, physiological, and molecular mechanisms of thermotolerance to develop ‘climate-smart’ crops. Heat Stress Tolerance in Plants provides a holistic, cross-disciplinary survey of the latest science in this important field. Presenting contributions from an international team of plant scientists and researchers, this text examines heat stress, its impact on crop plants, and various mechanisms to modulate tolerance levels. Topics include recent advances in molecular genetic approaches to increasing heat tolerance, the potential role of biochemical and molecular markers in screening germplasm for thermotolerance, and the use of next-generation sequencing to unravel the novel genes associated with defense and metabolite pathways. This insightful book: Places contemporary research on heat stress in plants within the context of global climate change and population growth Includes diverse analyses from physiological, biochemical, molecular, and genetic perspectives Explores various approaches to increasing heat tolerance in crops of high commercial value, such as cotton Discusses the applications of plant genomics in the development of thermotolerant ‘designer crops’ An important contribution to the field, Heat Stress Tolerance in Plants is an invaluable resource for scientists, academics, students, and researchers working in fields of pulse crop biochemistry, physiology, genetics, breeding, and biotechnology.

Concepts in Plant Metabolomics

Author : B.J. Nikolau
Publisher : Springer
ISBN 13 : 9789048111749
Total Pages : 298 pages
Book Rating : 4.1/5 (117 download)

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Book Synopsis Concepts in Plant Metabolomics by : B.J. Nikolau

Download or read book Concepts in Plant Metabolomics written by B.J. Nikolau and published by Springer. This book was released on 2009-09-03 with total page 298 pages. Available in PDF, EPUB and Kindle. Book excerpt: Like genomics, which defines genes in a genome irrespective of functionality, metabolomics profiles all metabolites in a biological sample irrespective of the chemical and physical properties of these molecules. Metabolomics can potentially define cellular processes by providing a measure of the ultimate phenotype of an organism, characterized by the collage of small molecules whose levels of accumulation is altered in response to genetic and environmentally induced changes in gene expression.