Phase Separated Biomolecular Condensates

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Phase-Separated Biomolecular Condensates

Author : Huan-Xiang Zhou
Publisher : Springer Nature
ISBN 13 : 1071626639
Total Pages : 454 pages
Book Rating : 4.0/5 (716 download)

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Book Synopsis Phase-Separated Biomolecular Condensates by : Huan-Xiang Zhou

Download or read book Phase-Separated Biomolecular Condensates written by Huan-Xiang Zhou and published by Springer Nature. This book was released on 2022-10-13 with total page 454 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume provides readers with a broad collection of theoretical, computational, and experimental methods to quantitatively study the properties of phase-separate biomolecular condensates in diverse systems. The chapters in this book cover topics such as theoretical and computational methods; methods for in vitro characterization of biomolecular condensates; and techniques that enable in-cell characterization of biomolecular condensates. Written in the highly successful Methods in Molecular Biology series format, chapters include introduction to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and expert tips on troubleshooting and avoiding known pitfalls. Comprehensive and thorough, Phase-Separated Biomolecular Condensates: Methods and Protocols is a valuable resource that helps researchers learn and use established methods to study both biophysical properties and biological functions of biomolecular condensates.

Liquid-Liquid Phase Coexistence and Membraneless Organelles

Author :
Publisher : Academic Press
ISBN 13 : 0128211598
Total Pages : 406 pages
Book Rating : 4.1/5 (282 download)

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Book Synopsis Liquid-Liquid Phase Coexistence and Membraneless Organelles by :

Download or read book Liquid-Liquid Phase Coexistence and Membraneless Organelles written by and published by Academic Press. This book was released on 2021-01-29 with total page 406 pages. Available in PDF, EPUB and Kindle. Book excerpt: Methods in Enzymology, Volume 646, continues the legacy of this premier serial with quality chapters authored by leaders in the field. Chapters in this new release include Methods for Studying RNA condensation/granules in vitro, RNA Dynamics in Intracellular Condensates, Methods for Viscoelastic Characterization of Liquid and Gel Condensates, Incorporating Proteins into Complex Coacervates, Methods for Study of Liquid-Liquid Phase Coexistence in Proximity to Lipid Membranes, Preparation of and Solute Partitioning in Multiphase Coacervates, Reversible photocontrol of DNA coacervation, Enzymatic Control over Coacervation, and much more. Provides the authority and expertise of leading contributors from an international board of authors Presents the latest release in the Methods in Enzymology series

Biological Liquid-Liquid Phase Separation, Biomolecular Condensates, and Membraneless Organelles

Author : Vladimir N Uversky
Publisher : Mdpi AG
ISBN 13 : 9783036589312
Total Pages : 0 pages
Book Rating : 4.5/5 (893 download)

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Book Synopsis Biological Liquid-Liquid Phase Separation, Biomolecular Condensates, and Membraneless Organelles by : Vladimir N Uversky

Download or read book Biological Liquid-Liquid Phase Separation, Biomolecular Condensates, and Membraneless Organelles written by Vladimir N Uversky and published by Mdpi AG. This book was released on 2023-11-13 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This reprint presents recent developments in the field of biological liquid-liquid phase separation (LLPS, also known as biomolecular condensation). LLPS and related biogenesis of various membraneless organelles (MLOs) and biomolecular condensates (BMCs) represent fundamental molecular mechanisms governing the spatio-temporal organization of the intracellular space. In fact, MLOs and BMCs, being liquid droplets, represent specific compartments within a cell that are not enclosed by a lipid membrane. Most biological LLPS processes are reversible, and many MLOs/BMCs exist transiently; they rapidly emerge when conditions are changed and rapidly disintegrate as soon as the original conditions are restored, thereby showing a characteristic "now you see me, now you don't" behavior. Numerous MLOs/BMCs are found inside eukaryotic cells, where they exist as liquid droplets (or cellular bodies, puncta, etc.) in the cytoplasm, nucleoplasm, mitochondrial matrix, and stroma of chloroplasts. Furthermore, MLOs/BMCs are commonly observed in Archaea, bacteria, and, likely, viruses. MLOs/BMCs have numerous crucial functions, and their biogenesis is known to be controlled by various external factors and environmental cues, such as changes in temperature, pH, and ionic strength of the solution. All of these have garnered the close attention of many researchers to biological LLPS, MLOs, and BMCs.

Droplets of Life

Author : Vladimir N Uversky
Publisher : Academic Press
ISBN 13 : 0128241756
Total Pages : 730 pages
Book Rating : 4.1/5 (282 download)

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Book Synopsis Droplets of Life by : Vladimir N Uversky

Download or read book Droplets of Life written by Vladimir N Uversky and published by Academic Press. This book was released on 2022-11-09 with total page 730 pages. Available in PDF, EPUB and Kindle. Book excerpt: Droplets of Life: Membrane-Less Organelles, Biomolecular Condensates, and Biological Liquid–Liquid Phase Separation provides foundational information on the biophysics, biogenesis, structure, functions, and roles of membrane-less organelles. The study of liquid–liquid phase separation has attracted a lot of attention from disciplines such as cell biology, biophysics, biochemistry, and others trying to understand how, why, and what roles these condensates play in homeostasis and disease states in living organisms. This book's editor recruited a group of international experts to provide a current and authoritative overview of all aspects associated with this exciting area. Sections introduce membrane-less organelles (MLOs) and biomolecular condensates; MLOs in different sizes, shapes, and composition; and the formation of MLOs due to phase separation and how it can tune reactions, organize the intracellular environment, and provide a role in cellular fitness. . Presents the first book to establish the foundations of this exciting research area Combines biophysics, structural and cell biology, and biochemistry perspectives into a single volume Edited and authored by world-leading scientists Covers basic physical and biological principles and health and disease implications

Giant Vesicles

Author : Pier Luigi Luisi
Publisher : John Wiley & Sons
ISBN 13 : 0470511524
Total Pages : 426 pages
Book Rating : 4.4/5 (75 download)

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Book Synopsis Giant Vesicles by : Pier Luigi Luisi

Download or read book Giant Vesicles written by Pier Luigi Luisi and published by John Wiley & Sons. This book was released on 2008-04-30 with total page 426 pages. Available in PDF, EPUB and Kindle. Book excerpt: Perspectives in Supramolecular Chemistry Founded by J.-M. Lehn Perspectives in Supramolecular Chemistry reflects research which develops supramolecular structures with specific new properties, such as recognition, transport and simulation of biosystems or new materials. The series covers all areas from theoretical and modelling aspects through organic and inorganic chemistry and biochemistry to materials, solid-state and polymer sciences reflecting the many and varied applications of supramolecular structures in modern chemistry. Giant Vesicles Edited by Pier Luigi Luisi and Peter Walde Institute für Polymere, ETH-Zürich, Switzerland Giant vesicles or giant liposomes are supramolecular assembles of amphiphiles, surface active substances which normally contain one or two hydrophobic chains and one hydrophilic head. Due to their relatively large size, giant vesicles are easily observed by light microscopy. This volume provides an overview of ideas and results obtained from experimental studies as well as theoretical approaches. A wide variety of aspects ranging from pure mathematics and physical considerations to biochemical and biological applications are covered. Historical and fundamental aspects are discussed as well as a range of experimental approaches including the micromanipulation and micro-puncturing of single giant vesicles. 87 international contributors comment on a wide range of issues contained under the five main part headings: Introduction Preparation Methods Basic Theoretical Aspects Physical Properties Chemical and Biological Aspects. Giant Vesicles has been written for researchers in the fields of chemistry, biochemistry and biophysics, working in supra-molecular chemistry, surfactant science, liposome and pharmaceutical sciences.

Extracellular Matrix Degradation

Author : William C. Parks
Publisher : Springer Science & Business Media
ISBN 13 : 3642168612
Total Pages : 255 pages
Book Rating : 4.6/5 (421 download)

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Book Synopsis Extracellular Matrix Degradation by : William C. Parks

Download or read book Extracellular Matrix Degradation written by William C. Parks and published by Springer Science & Business Media. This book was released on 2011-04-07 with total page 255 pages. Available in PDF, EPUB and Kindle. Book excerpt: Regulated turnover of extracellular matrix (ECM) is an important component of tissue homeostasis. In recent years, the enzymes that participate in, and control ECM turnover have been the focus of research that touches on development, tissue remodeling, inflammation and disease. This volume in the Biology of Extracellular Matrix series provides a review of the known classes of proteases that degrade ECM both outside and inside the cell. The specific EMC proteases that are discussed include cathepsins, bacterial collagenases, matrix metalloproteinases, meprins, serine proteases, and elastases. The volume also discusses the domains responsible for specific biochemical characteristics of the proteases and the physical interactions that occur when the protease interacts with substrate. The topics covered in this volume provide an important context for understanding the role that matrix-degrading proteases play in normal tissue remodeling and in diseases such as cancer and lung disease.

The Immune Synapse

Author : Cosima T. Baldari
Publisher : Springer Nature
ISBN 13 : 1071631357
Total Pages : 518 pages
Book Rating : 4.0/5 (716 download)

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Book Synopsis The Immune Synapse by : Cosima T. Baldari

Download or read book The Immune Synapse written by Cosima T. Baldari and published by Springer Nature. This book was released on 2023-04-27 with total page 518 pages. Available in PDF, EPUB and Kindle. Book excerpt: This new collection features the most up-to-date essential protocols that are currently being used to study the immune synapse. Beginning with methods for making biophysical measurements, the volume continues by covering the cell biology of synapses, methods for advanced substrate engineering, mechanobiology topics, new technologies to describe and manipulate synaptic components, as well as methods related to sites of action and immunotherapy. Written for the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step and readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and fully updated, The Immune Synapse: Methods and Protocols, Second Edition serves as an ideal practical guide for researchers working in this dynamic field. Chapters 5, 11, 18, 27, 30, and 32 are available open access under a Creative Commons Attribution 4.0 International License via link.springer.com.

Intrinsically Disordered Proteins Studied by NMR Spectroscopy

Author : Isabella C. Felli
Publisher : Springer
ISBN 13 : 3319201646
Total Pages : 421 pages
Book Rating : 4.3/5 (192 download)

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Book Synopsis Intrinsically Disordered Proteins Studied by NMR Spectroscopy by : Isabella C. Felli

Download or read book Intrinsically Disordered Proteins Studied by NMR Spectroscopy written by Isabella C. Felli and published by Springer. This book was released on 2015-09-19 with total page 421 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book discusses the paradigm-shifting phenomenon of intrinsically disordered proteins (IDPs) and hybrid proteins containing ordered domains and functional IDP regions (IDPRs). The properties of IDPs and IDPRs are highly complementary to those deriving from the presence of a unique and well-defined three-dimensional fold. Ignored for a long time in high-resolution studies of proteins, intrinsic protein disorder is now recognized as one of the key features for a large variety of cellular functions, where structural flexibility presents a functional advantage in terms of binding plasticity and promiscuity and this volume explores this exciting new research. Recent progress in the field has radically changed our perspective to study IDPs through NMR: increasingly complex IDPs can now be characterized, a wide range of observables can be determined reporting on the structural and dynamic properties, computational methods to describe the structure and dynamics are in continuous development and IDPs can be studied in environments as complex as whole cells. This volume communicates the new exciting possibilities offered by NMR and presents open questions to foster further developments. Intrinsically Disordered Proteins Studied by NMR Spectroscopy provides a snapshot to researchers entering the field as well as providing a current overview for more experienced scientists in related areas.

Fuzziness

Author : Monika Fuxreiter
Publisher : Springer Science & Business Media
ISBN 13 : 1461406595
Total Pages : 190 pages
Book Rating : 4.4/5 (614 download)

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Book Synopsis Fuzziness by : Monika Fuxreiter

Download or read book Fuzziness written by Monika Fuxreiter and published by Springer Science & Business Media. This book was released on 2012-03-07 with total page 190 pages. Available in PDF, EPUB and Kindle. Book excerpt: Detailed characterization of fuzzy interactions will be of central importance for understanding the diverse biological functions of intrinsically disordered proteins in complex eukaryotic signaling networks. In this volume, Peter Tompa and Monika Fuxreiter have assembled a series of papers that address the issue of fuzziness in molecular interactions. These papers provide a broad overview of the phenomenon of fuzziness and provide compelling examples of the central role played by fuzzy interactions in regulation of cellular signaling processes and in viral infectivity. These contributions summarize the current state of knowledge in this new field and will undoubtedly stimulate future research that will further advance our understanding of fuzziness and its role in biomolecular interactions.

The Nucleolus

Author : Mark O. J. Olson
Publisher : Springer Science & Business Media
ISBN 13 : 1461405149
Total Pages : 414 pages
Book Rating : 4.4/5 (614 download)

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Book Synopsis The Nucleolus by : Mark O. J. Olson

Download or read book The Nucleolus written by Mark O. J. Olson and published by Springer Science & Business Media. This book was released on 2011-09-15 with total page 414 pages. Available in PDF, EPUB and Kindle. Book excerpt: Within the past two decades, extraordinary new functions for the nucleolus have begun to appear, giving the field a new vitality and generating renewed excitement and interest. These new discoveries include both newly-discovered functions and aspects of its conventional role. The Nucleolus is divided into three parts: nucleolar structure and organization, the role of the nucleolus in ribosome biogenesis, and novel functions of the nucleolus.

Advances in Chemical Physics

Author : Stuart A. Rice
Publisher : John Wiley & Sons
ISBN 13 : 1119290953
Total Pages : 576 pages
Book Rating : 4.1/5 (192 download)

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Book Synopsis Advances in Chemical Physics by : Stuart A. Rice

Download or read book Advances in Chemical Physics written by Stuart A. Rice and published by John Wiley & Sons. This book was released on 2016-08-19 with total page 576 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Advances in Chemical Physics series provides the chemical physics field with a forum for critical, authoritative evaluations of advances in every area of the discipline. • This is the only series of volumes available that presents the cutting edge of research in chemical physics. • Includes contributions from experts in this field of research. • Contains a representative cross-section of research that questions established thinking on chemical solutions • Structured with an editorial framework that makes the book an excellent supplement to an advanced graduate class in physical chemistry or chemical physics

Scaling Concepts in Polymer Physics

Author : Pierre-Gilles de Gennes
Publisher : Cornell University Press
ISBN 13 : 9780801412035
Total Pages : 336 pages
Book Rating : 4.4/5 (12 download)

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Book Synopsis Scaling Concepts in Polymer Physics by : Pierre-Gilles de Gennes

Download or read book Scaling Concepts in Polymer Physics written by Pierre-Gilles de Gennes and published by Cornell University Press. This book was released on 1979 with total page 336 pages. Available in PDF, EPUB and Kindle. Book excerpt: The first stage of the physics of long, flexible chains was pioneered by eminent scientists such as Debye, Kuhn, Kramers, and Flory, who formulated the basic ideas. In recent years, because of the availability of new experimental and theoretical tools, a second stage of the physics of polymers has evolved. In this book, a noted physicist explains the radical changes that have taken place in this exciting and rapidly developing field. Pierre-Gilles de Gennes points out the three developments that have been essential for recent advances in the study of large-scale conformations and motions of flexible polymers in solutions and melts. They are the advent of neutron-scattering experiments on selectively deuterated molecules; the availability of inelastic scattering of laser light, which allows us to study the cooperative motions of the chains; and the discovery of an important relationship between polymer statistics and critical phenomena, leading to many simple scaling laws. Until now, information relating to these advances has not been readily accessible to physical chemists and polymer scientists because of the difficulties in the new theoretical language that has come into use. Professor de Gennes bridges this gap by presenting scaling concepts in terms that will be understandable to students in chemistry and engineering as well as in physics.

Liquid-Liquid Phase Coexistence and Membraneless Organelles

Author :
Publisher : Academic Press
ISBN 13 : 0128211601
Total Pages : 408 pages
Book Rating : 4.1/5 (282 download)

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Book Synopsis Liquid-Liquid Phase Coexistence and Membraneless Organelles by :

Download or read book Liquid-Liquid Phase Coexistence and Membraneless Organelles written by and published by Academic Press. This book was released on 2021-01-14 with total page 408 pages. Available in PDF, EPUB and Kindle. Book excerpt: Methods in Enzymology, Volume 646, continues the legacy of this premier serial with quality chapters authored by leaders in the field. Chapters in this new release include Methods for Studying RNA condensation/granules in vitro, RNA Dynamics in Intracellular Condensates, Methods for Viscoelastic Characterization of Liquid and Gel Condensates, Incorporating Proteins into Complex Coacervates, Methods for Study of Liquid-Liquid Phase Coexistence in Proximity to Lipid Membranes, Preparation of and Solute Partitioning in Multiphase Coacervates, Reversible photocontrol of DNA coacervation, Enzymatic Control over Coacervation, and much more. Provides the authority and expertise of leading contributors from an international board of authors Presents the latest release in the Methods in Enzymology series

Diagrammatics: Lectures On Selected Problems In Condensed Matter Theory (2nd Edition)

Author : Sadovskii Michael V
Publisher : World Scientific
ISBN 13 : 9811212228
Total Pages : 384 pages
Book Rating : 4.8/5 (112 download)

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Book Synopsis Diagrammatics: Lectures On Selected Problems In Condensed Matter Theory (2nd Edition) by : Sadovskii Michael V

Download or read book Diagrammatics: Lectures On Selected Problems In Condensed Matter Theory (2nd Edition) written by Sadovskii Michael V and published by World Scientific. This book was released on 2019-09-26 with total page 384 pages. Available in PDF, EPUB and Kindle. Book excerpt: The introduction of quantum field theory methods has led to a kind of 'revolution' in condensed matter theory, resulting in the increased importance of Feynman diagrams or diagram technique. So, it has now become imperative for professionals in condensed matter theory to have a thorough knowledge of this method.The book is intended to teach students, postdocs and young theorists to use diagrammatic quantum field theory methods applied to different problems of modern condensed matter theory, using specific examples of such problems. This latest edition is extended by the inclusion of some new material on superconductivity and diagram combinatorics.

Enzyme Activity in Single Cells

Author :
Publisher : Academic Press
ISBN 13 : 0128170905
Total Pages : 326 pages
Book Rating : 4.1/5 (281 download)

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Book Synopsis Enzyme Activity in Single Cells by :

Download or read book Enzyme Activity in Single Cells written by and published by Academic Press. This book was released on 2019-11-12 with total page 326 pages. Available in PDF, EPUB and Kindle. Book excerpt: Enzyme Activity in Single Cells, Volume 628, the latest release in the Methods of Enzymology series, discusses groundbreaking cellular physiology research that is taking place in the biological sciences. Chapters in this new release cover Spatial and temporal resolution of caspase waves in single Xenopus eggs during apoptosis, Spatial and temporal organization of metabolic complexes in cells, Measuring cellular efflux and biomolecular delivery: synthetic approaches to imaging and engineering cells, Slide-based, single-cell enzyme assays, Single-cell assays using integrated continuous-flow microfluidics, High-throughput screening of single-cell lysates, Microfluidic capture of single cells for drug resistance assays, and much more. Provides the authority and expertise of leading contributors from an international board of authors Presents the latest release in the Methods in Enzymology series Includes the latest information on Enzyme Activity in Single Cells

Ribozymes

Author : Robert J Scarborough
Publisher : Humana
ISBN 13 : 9781071607183
Total Pages : 304 pages
Book Rating : 4.6/5 (71 download)

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Book Synopsis Ribozymes by : Robert J Scarborough

Download or read book Ribozymes written by Robert J Scarborough and published by Humana. This book was released on 2021-08-09 with total page 304 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume provides protocols designed to study the function and the structure of diverse ribozymes. Chapters guide readers through different techniques to identify and characterize new ribozymes and methods to use ribozymes to alter the function of CRISPR-based guide RNAs, AgoshRNAs and aptamers or to study RNA capping and long non-coding RNAs. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Ribozymes: Methods and Protocols aims to help in accelerating ribozyme research and inspiring others to develop new methods to study ribozyme structure and function.

Cell Biology by the Numbers

Author : Ron Milo
Publisher : Garland Science
ISBN 13 : 1317230698
Total Pages : 400 pages
Book Rating : 4.3/5 (172 download)

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Book Synopsis Cell Biology by the Numbers by : Ron Milo

Download or read book Cell Biology by the Numbers written by Ron Milo and published by Garland Science. This book was released on 2015-12-07 with total page 400 pages. Available in PDF, EPUB and Kindle. Book excerpt: A Top 25 CHOICE 2016 Title, and recipient of the CHOICE Outstanding Academic Title (OAT) Award. How much energy is released in ATP hydrolysis? How many mRNAs are in a cell? How genetically similar are two random people? What is faster, transcription or translation?Cell Biology by the Numbers explores these questions and dozens of others provid