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Multiheme Cytochromes
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Book Synopsis Multiheme Cytochromes by : Carlos A. Salgueiro
Download or read book Multiheme Cytochromes written by Carlos A. Salgueiro and published by Springer. This book was released on 2016-10-08 with total page 39 pages. Available in PDF, EPUB and Kindle. Book excerpt: This brief introduces the structural and functional characterization of this important group of proteins. The content of each chapter is aimed at the non-specialist so that key concepts, methodologies and applications can be presented in a "snapshot" style volume. Multiheme cytochromes are ever more important now that it is possible to obtain genome sequences of microorganisms which have major biotechnological and environmental implications. There is a tremendous profusion of multiheme cytochromes which have great potential as targets for bioremediation and bioenergy applications. This brief gives a glimpse of an intriguing and fast-moving field.
Book Synopsis Structural and Functional Relationships in Prokaryotes by : Larry Barton
Download or read book Structural and Functional Relationships in Prokaryotes written by Larry Barton and published by Springer Science & Business Media. This book was released on 2005 with total page 850 pages. Available in PDF, EPUB and Kindle. Book excerpt: This new textbook on bacterial physiology is aimed at senior level students pursuing a one-semester course in the biology or microbiology curriculum. The text takes a balanced view of prokaryotic physiology, discussing both bioenergetics and bacterial metabolism in a way that establishes general principles and concepts and emphasizes throughout the information gained from model systems. The book also covers some experimental design issues, giving students an appreciation of the practical aspects and consequences of bacterial metabolism. It also stimulates students’ interests in future developments in the field by including discussions by five world-famous bacterial physiologists about future developments in the field.
Book Synopsis Current Challenges and Future Perspectives on Emerging Bioelectrochemical Technologies by : Tian Zhang
Download or read book Current Challenges and Future Perspectives on Emerging Bioelectrochemical Technologies written by Tian Zhang and published by Frontiers Media SA. This book was released on 2016-08-05 with total page 123 pages. Available in PDF, EPUB and Kindle. Book excerpt: The increasing demand for energy worldwide, currently evaluated at 13 terawatts per year, has triggered a surge in research on alternative energy sources more sustainable and environmentally friendly. Bio-catalyzed electrochemical systems (BESs) are a rapidly growing biotechnology for sustainable production of bioenergy and/or value-added bioproducts using microorganisms as catalysts for bioelectrochemical reactions at the electrode surface. In the last decades, this biotechnology has been intensively studied and developed as a flexible and practical platform for multiple applications such as electricity production, wastewater treatment, pollutants remediation, desalination and production of biogas, biofuels, or other commodities. BESs could have a critical impact on societies in many spheres of activity and become one of the solutions to reform our petroleum-based economy. However, BESs research has so far been limited to lab scale with the notable exceptions of pilot scale microbial fuel cells for brewery and winery wastewater treatment coupled with electricity generation. In general, more knowledge has to be acquired to overcome the issues that are stymieing BESs development and commercialization. For example, it is critical to understand better microbial physiology including the mechanisms responsible for the transfer of electrons between the microbes and the electrodes to start optimizing the systems in a more rational manner. There are many BES processes and for each one of them there is a multitude of biological and electrochemical specifications to investigate and adjust such as the nature of the microbial platform, electrode materials, the reactor design, the substrate, the medium composition, and the operating conditions. The ultimate goal is to develop highly energy efficient BESs with a positive footprint on the environment while maintaining low cost and generating opportunities to create value. BESs are complex systems developed with elements found in multiple fields of science such as microbiology, molecular biology, bioinformatics, biochemistry, electrochemistry, material science and environmental engineering. Given the high volume of research activities going on in the field of BESs today, this e-book explores the current challenges, the more recent progresses, and the future perspectives of BESs technologies. The BESs discussed here include microbial fuel cells, microbial electrolysis cells, microbial electrosynthesis cells, microbial electroremediation cells, etc.
Book Synopsis Extremophiles: Microbial Genomics and Taxogenomics by : Rafael R. de la Haba
Download or read book Extremophiles: Microbial Genomics and Taxogenomics written by Rafael R. de la Haba and published by Frontiers Media SA. This book was released on 2022-08-31 with total page 431 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Research on Nitrification and Related Processes by :
Download or read book Research on Nitrification and Related Processes written by and published by Academic Press. This book was released on 2011-02-17 with total page 608 pages. Available in PDF, EPUB and Kindle. Book excerpt: State-of-the-art update on methods and protocols dealing with the detection, isolation and characterization of macromolecules and their hosting organisms that facilitate nitrification and related processes in the nitrogen cycle as well as the challenges of doing so in very diverse environments. Provides state-of-the-art update on methods and protocols Deals with the detection, isolation and characterization of macromolecules and their hosting organisms deals with the challenges of very diverse environments.
Book Synopsis Radiation in Bioanalysis by : Alice S. Pereira
Download or read book Radiation in Bioanalysis written by Alice S. Pereira and published by Springer Nature. This book was released on 2019-09-21 with total page 397 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes the state of the art across the broad range of spectroscopic techniques used in the study of biological systems. It reviews some of the latest advances achieved in the application of these techniques in the analysis and characterization of small and large biological compounds, covering topics such as VUV/UV and UV-visible spectroscopies, fluorescence spectroscopy, IR and Raman techniques, dynamic light scattering (DLS), circular dichroism (CD/SR-CD), pulsed electron paramagnetic resonance techniques, Mössbauer spectroscopy, nuclear magnetic resonance, X-ray methods and electron and ion impact spectroscopies. The second part of the book focuses on modelling methods and illustrates how these tools have been used and integrated with other experimental and theoretical techniques including also electron transfer processes and fast kinetics methods. The book will benefit students, researchers and professionals working with these techniques to understand the fundamental mechanisms of biological systems.
Book Synopsis Systems Biogeochemistry of Major Marine Biomes by : Aninda Mazumdar
Download or read book Systems Biogeochemistry of Major Marine Biomes written by Aninda Mazumdar and published by John Wiley & Sons. This book was released on 2022-04-01 with total page 339 pages. Available in PDF, EPUB and Kindle. Book excerpt: Systems Biogeochemistry of Major Marine Biomes A comprehensive system-level discussion of the geomicrobiology of the Earth’s oceans In Systems Biogeochemistry of Major Marine Biomes, a team of distinguished researchers delivers a systemic overview of biogeochemistry across a number of major physiographies of the global ocean: the waters and sediments overlying continental margins; the deep sub-surfaces; the Arctic and Antarctic oceans; and the physicochemical extremes such as the hypersaline and sulfidic marine zones, cold methane seeps and hydrothermal ecosystems. The book explores state-of-the-art advances in marine geomicrobiology and investigates the drivers of biogeochemical processes. It highlights the imperatives of the unique, fringe, and cryptic processes while studying the geological manifestations and ecological feedbacks of in situ microbial metabolisms. Taking a holistic approach toward the understanding of marine biogeochemical provinces, this book emphasizes the centrality of culture-dependent and culture-independent (meta-omics-based) microbiological information within a systems biogeochemistry framework. Perfect for researchers and scientists in the fields of geochemistry, geophysics, geomicrobiology, oceanography, and marine science, Systems Biogeochemistry of Major Marine Biomes will also earn a place in the libraries of policymakers and advanced graduate students seeking a one-stop reference on marine biogeochemistry.
Book Synopsis Advances in Microbial Physiology by :
Download or read book Advances in Microbial Physiology written by and published by Academic Press. This book was released on 2012-09-01 with total page 463 pages. Available in PDF, EPUB and Kindle. Book excerpt: Advances in Microbial Physiology is one of the most successful and prestigious series from Academic Press, an imprint of Elsevier. It publishes topical and important reviews, interpreting physiology to include all material that contributes to our understanding of how microorganisms and their component parts work. First published in 1967, it is now in its 60th volume. The Editors have always striven to interpret microbial physiology in the broadest context and have never restricted the contents to “traditional views of whole cell physiology. Now edited by Professor Robert Poole, University of Sheffield, Advances in Microbial Physiology continues to be an influential and very well reviewed series. Contributions from leading authorities Informs and updates on all the latest developments in the field
Book Synopsis Community Series-Extremophiles: Microbial Genomics and Taxogenomics, Volume II by : Rafael R. de la Haba
Download or read book Community Series-Extremophiles: Microbial Genomics and Taxogenomics, Volume II written by Rafael R. de la Haba and published by Frontiers Media SA. This book was released on 2024-02-08 with total page 258 pages. Available in PDF, EPUB and Kindle. Book excerpt: This Research Topic is the second volume of the 'Community series-Extremophiles: Microbial Genomics and Taxogenomics'. Please see the first volume here. Extreme habitats exist across the globe and span over three quarters of our planet. They can be widely different from a physical-chemical perspective as they include diverse types of extreme, such as temperature, pH, salinity, radiation, pressure, low water activity, low nutrient availability, etc. Organisms capable of adjusting, surviving, or thriving in those habitats, which are so hostile that they were previously thought to be adverse or lethal for life, are called “extremophiles”.
Download or read book Cytochrome Systems written by S. Papa and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 769 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume is based on the proceedings of an International Symposium on "Cytochrome Systems: Molecular Biology and Bioenergetics" that was held at Selva di Fasano near Bari, Italy, between April 7 and 11,1987. It contains papers covering the subjects discussed at the Symposium, contributed both by participants of the meeting and by some invited speakers who were not able to attend. The aim of the Symposium was to bring together experts in various rese arch strategies currently being applied to the study of cytochrome systems, including molecular genetics, protein chemistry, enzymology of electron transfer and protonmotive activity in energy-transducing biological mem branes. Because of the high degree of complexity of cytochrome systems and the increasing sophistication in recent years of the different experimen tal approaches, there has been a growing specialization - sometimes even a tendency to "over-specialization" - among scientists working in this field. This in itself seemed to justify a meeting where representatives of various disciplines could exchange their results and discuss their conclusions. In addition, and perhaps even more importantly, it was felt that meetings of this kind provide an opportunity for a "cross-fertilization" of approaches and ideas among representatives of various fields of science. The present meeting proved to be an ample illustration of the success of such an inter action.
Book Synopsis Advances in Microbial Physiology by : Robert K. Poole
Download or read book Advances in Microbial Physiology written by Robert K. Poole and published by Academic Press. This book was released on 2012-07-17 with total page 463 pages. Available in PDF, EPUB and Kindle. Book excerpt: Advances in Microbial Physiology is one of the most successful and prestigious series from Academic Press, an imprint of Elsevier. It publishes topical and important reviews, interpreting physiology to include all material that contributes to our understanding of how microorganisms and their component parts work. First published in 1967, it is now in its 60th volume. The Editors have always striven to interpret microbial physiology in the broadest context and have never restricted the contents to "traditional” views of whole cell physiology. Now edited by Professor Robert Poole, University of Sheffield, Advances in Microbial Physiology continues to be an influential and very well reviewed series. Contributions from leading authorities Informs and updates on all the latest developments in the field
Book Synopsis The Metal-Driven Biogeochemistry of Gaseous Compounds in the Environment by : Peter M.H. Kroneck
Download or read book The Metal-Driven Biogeochemistry of Gaseous Compounds in the Environment written by Peter M.H. Kroneck and published by Springer. This book was released on 2014-11-22 with total page 363 pages. Available in PDF, EPUB and Kindle. Book excerpt: MILS-14 provides a most up-to-date view of the exciting biogeochemistry of gases in our environment as driven mostly by microorganisms. These employ a machinery of sophisticated metalloenzymes, where especially transition metals (such as Fe, Ni, Cu, Mo, W) play a fundamental role, that is, in the activation, transformation and syntheses of gases like dihydrogen, methane, carbon monoxide, acetylene and those of the biological nitrogen and sulfur cycles. The Metal-Driven Biogeochemistry of Gaseous Compounds in the Environment is a vibrant research area based mainly on structural and microbial biology, inorganic biological chemistry and environmental biochemistry. All this is covered in an authoritative manner in 11 stimulating chapters, written by 26 internationally recognized experts and supported by nearly 1200 references, informative tables and about 100 illustrations (two thirds in color). MILS-14 also provides excellent information for teaching. Peter M. H. Kroneck is a bioinorganic chemist who is exploring the role of transition metals in biology, with a focus on functional and structural aspects of microbial iron, copper and molybdenum enzymes and their impact on the biogeochemical cycles of nitrogen and sulfur. Martha E. Sosa Torres is an inorganic chemist, with special interests in magnetic properties of newly synthesized transition metal complexes and their reactivity towards molecular oxygen, applying kinetic, electrochemical and spectroscopic techniques.
Book Synopsis The Geochemical Origin of Microbes by : William F. Martin
Download or read book The Geochemical Origin of Microbes written by William F. Martin and published by CRC Press. This book was released on 2024-06-27 with total page 249 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is a textbook covering the transition from energy releasing reactions on the early Earth to energy releasing reactions that fueled growth in the first microbial cells. It is for teachers and college students with an interest in microbiology, geosciences, biochemistry, evolution, or all of the above. The scope of the book is a quantum departure from existing “origin of life” books in that it starts with basic chemistry and links energy-releasing geochemical processes to the reactions of microbial metabolism. The text reaches across disciplines, providing students of the geosciences an origins/biology interface and bringing a geochemistry/origins interface to students of microbiology and evolution. Beginning with physical chemistry and transitioning across metabolic networks into microbiology, the timeline documents chemical events and organizational states in hydrothermal vents – the only environments known that bridge the gap between spontaneous chemical reactions that we can still observe in nature today and the physiology of microbes that live from H2, CO2, ammonia, phosphorus, inorganic salts and water. Life is a chemical reaction. What it is and how it arose are two sides of the same coin. Key Features Provides clear connections between geochemical reactions and microbial metabolism Focuses on chemical mechanisms and transition metals Richly illustrated with color figures explaining reactions and processes Covers the origin of the Earth, the origin of metabolism, the origin of protein synthesis and genetic information as well as the escape into the wild of the first free-living cells: Bacteria and Archaea
Book Synopsis Archaeal Cell Envelope and Surface Structures by : Sonja-Verena Albers
Download or read book Archaeal Cell Envelope and Surface Structures written by Sonja-Verena Albers and published by Frontiers Media SA. This book was released on 2016-03-10 with total page 180 pages. Available in PDF, EPUB and Kindle. Book excerpt: Archaea and Bacteria have complex cell envelopes that play important roles in several vital cellular processes, including serving as a barrier that protects the cytoplasm from the environment. Along with associated proteinaceous structures, cell envelopes also ensure cell stability, promote motility, mediate adherence to biotic and abiotic surfaces, and facilitate communication with the extracellular environment. While some aspects of the biosynthesis and structure of the cell are similar to the three domains of life, archaeal cell envelopes exhibit several unique characteristics. Moreover, recent analyzes have revealed that many features of cell envelopes can vary greatly between distantly related archaea. The collection of reviews and original research papers in this focused issue describes research that has been significantly expanded in our understanding of the mechanisms underlying the biogenesis and functions of archaeal cell envelopes and their constituent surface structures. Jain et al. (5) cytoplasmic membrane, isoprenoid lipid bilayer, as well as recently revealed the cytoplasmic membrane biosynthesis, which is conserved across the three domains of life. Complementing this review, Andreas Klingl summarizes the diverse structures and functions of archaeal cytoplasmic membranes (8). While most archaeal cells have a single membrane, the archaea have an outer membrane, which has been thought of in a different variety of archaeal lineages. One particular intriguing diderm is the hyperthermophilic archaeon. In the periplasmic space, ATP in the periplasmic space. Complementing this work, Kletzin provides an in-depth review of evolutionarily conserved and unique archaeal inner and outer membrane-associated cytochromes (7). The periplasmic space between the membranes of archaeal diderms does not contain a peptidoclycan layer. In fact, while the cytoplasmic membrane is superimposed by an S-layer in many monoderm archaea, it is unclear how diderms, and even some monoderm extremophiles that varnish to S-layer, withstand osmotic stress. As noted by Klingl (8), glycocalyx, lipoglycans, or other protective cell-associated glycoproteins, may take on the functions of a cell wall in some archaea. One such secreted protein, as described by Zenke et al., Is the halomucin of Haloquadratum walsbyi (15). While H. walsbyi does not have a cell wall, halomucine, an unusually large protein (9159aa), is thought to play an important role in protecting these extreme halophiles against desiccation. Interestingly, Candidatus Altiarchaeum hamiconexum, an uncultured diderm euryarchaeon, isolated from biofilms containing hammers, cell surface proteins with the appearance of grappling hooks that connect cells to each other and to abiotic surfaces. Perra's stunning imagery suggests that this is the case with the S-layer glycoproteins, possibly suggesting a case of divergent evolution (12). [0003] The present invention relates to a method and apparatus for the preparation of a medical device, Are conserved across the prokaryotic domains, being found in the majority of sequenced archaea, where, as in bacteria, they play key roles in processes necessary for biofilm formation (10, 13). Interestingly, as discussed by Albers and Jarrell (1), as well as Näther et al. (11), a type IV pilus-like structure is responsible for swimming motility in archaea. Many secreted proteins, including the S-layer glycoprotein and pilin-like proteins, are heavily post-translationally modified. [1]. [0002] The known proteolytic modifications of the proteins of the model haloarchaeon [1], vol. Using the results of proteomic studies, Leon et al. (9), providing an invaluable resource in silico prediction tools for the characterization of archaeal proteins, in general, but also specific phyla. Kandiba and Eichler review our current knowledge of N-glycosylation in archaea, including descriptions of the pathways the regulatory roles of this post-translational modification plays in cellular processes (6). Considering the unique aspects of the archaeal cell envelope, including not only the protein structures, but their post-translational modifications as well, it is not surprising that archaeal viruses have evolved specific mechanisms to infect and egress from archaeal cells, which are reviewed in this Issue by Quemin and Quax (14). Understanding the roles that can be seen in this book is a study of the development of biofuels in the field of bioinformatics, including mucosa-associated methanogenic archaea, can (2). (2) In this paper, Archaeal cell membranes and S-layer glycoproteins have been used to make liposomes and nanomaterials. Finally, a better understanding of the similarities and differences among the archaea as well as between the archaea and the other two domains will lead to the development of a more accurate phylogeny. In this issue, Forterre takes advantage of the latest profusion of genome studies, along with supporting in vivo work, to assemble an improved tree of life (3). Conflict of Interest Statement The authors declare that this is not the case. Acknowledgments The support of the National Science Foundation MCB-1413158 to MP and the ERC starting grant 311523 (archaellum) to SA are gratefully acknowledged. References: 1. Albers SV & Jarrell KF (2015) The archaellum: how Archaea swim. Frontiers in microbiology 6:23. 2. Bang C, et al. (2014) Biofilm formation of mucosa-associated methanoarchaeal strains. Frontiers in microbiology 5: 353. 3. Forterre P (2015) The Universal Tree: an update. Frontiers in Microbiology, in 4. Gimenez MI, Cerletti M, & De Castro RE (2015) Archaeal membrane-associated proteases: insights on Haloferax volcanii and other haloarchaea. Frontiers in microbiology 6:39. 5. Jain S, Caforio A, & Driessen AJ (2014) Biosynthesis of archaeal membrane ether lipids. Frontiers in microbiology 5: 641. 6. Kandiba L & Eichler J (2014) Archaeal S-layer glycoproteins: post-translational modification in the face of extremes. Frontiers in microbiology 5: 661. 7. Kletzin A, et al. (2015) Cytochromes c in Archaea: distribution, maturation, cell architecture, and the special case of Ignicoccus hospitalis. Frontiers in microbiology 6: 439. 8. Klingl A (2014) S-layer and cytoplasmic membrane - exceptions from the typical archaeal cell wall with a focus on double membranes. Frontiers in microbiology 5: 624. 9. Leon DR, et al. (2015) Mining proteomic data to expose protein modifications to methanosarcina mazei strain Go1. Frontiers in microbiology 6: 149. 10. Losensky G, Vidakovic L, Klingl A, Pfeifer F, & Frols S (2014) Novel pili-like surface structures of Halobacterium salinarum strain R1 are crucial for surface adhesion. Frontiers in microbiology 5: 755. 11. Nather-Schindler DJ, Schopf S, Bellack A, Rachel R, & Wirth R (2014) Pyrococcus furiosus flagella: biochemical and transcriptional analyzes identify the newly detected flaB0 gene to encode the major flagellin. Frontiers in microbiology 5: 695. 12. Perras AK, et al. (2015) S-layers at second glance? Altiarchaeal grappling hooks (hami) resemble archaeal S-layer proteins in structure and sequence. Frontiers in microbiology 6: 543. 13. Pohlschroder M & Esquivel RN (2015) Archaeal type IV pili and their involvement in biofilm formation. Frontiers in microbiology 6:19. 14. Quemin ER & Quax TE (2015) Archaeal viruses at the cell envelope: entry and egress. Frontiers in microbiology 6: 552. 15. Zenke R, et al. (2015) fluorescence microscopy visualization of halomucin, a secreted 927 kDa protein surrounding haloquadratum walsbyi cells. Frontiers in microbiology 6: 249.
Book Synopsis Rising Stars in Hydrothermal Vents and Cold Seeps: 2021 by : Brett J. Baker
Download or read book Rising Stars in Hydrothermal Vents and Cold Seeps: 2021 written by Brett J. Baker and published by Frontiers Media SA. This book was released on 2023-10-30 with total page 143 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Hemeproteins: Advances in Research and Application: 2011 Edition by :
Download or read book Hemeproteins: Advances in Research and Application: 2011 Edition written by and published by ScholarlyEditions. This book was released on 2012-01-09 with total page 406 pages. Available in PDF, EPUB and Kindle. Book excerpt: Hemeproteins: Advances in Research and Application: 2011 Edition is a ScholarlyEditions™ eBook that delivers timely, authoritative, and comprehensive information about Hemeproteins. The editors have built Hemeproteins: Advances in Research and Application: 2011 Edition on the vast information databases of ScholarlyNews.™ You can expect the information about Hemeproteins in this eBook to be deeper than what you can access anywhere else, as well as consistently reliable, authoritative, informed, and relevant. The content of Hemeproteins: Advances in Research and Application: 2011 Edition has been produced by the world’s leading scientists, engineers, analysts, research institutions, and companies. All of the content is from peer-reviewed sources, and all of it is written, assembled, and edited by the editors at ScholarlyEditions™ and available exclusively from us. You now have a source you can cite with authority, confidence, and credibility. More information is available at http://www.ScholarlyEditions.com/.
Book Synopsis The microbial sulfur cycle by : Martin G. Klotz
Download or read book The microbial sulfur cycle written by Martin G. Klotz and published by Frontiers E-books. This book was released on 2011-12-01 with total page 258 pages. Available in PDF, EPUB and Kindle. Book excerpt: Sulfur is the tenth most abundant element in the universe and the sixth most abundant element in microbial biomass. By virtue of its chemical properties, particularly the wide range of stable redox states, sulfur plays a critical role in central biochemistry as a structural element, redox center, and carbon carrier. In addition, redox reactions involving reduced and oxidized inorganic sulfur compounds can be utilized by microbes for the generation and conservation of biochemical energy. Microbial transformation of both inorganic and organic sulfur compounds has had a profound effect on the properties of the biosphere and continues to affect geochemistry today. For these reasons, we present here a collection of articles from the leading edge of the field of sulfur microbiology, focusing on reactions and compounds of geochemical significance.
