Molecular Marker Analysis of Population Genetic Structure and Progress from Reciprocal Recurrent Selection in Two Iowa Maize (Zea Mays L.) Populations

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Total Pages : 208 pages
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Book Synopsis Molecular Marker Analysis of Population Genetic Structure and Progress from Reciprocal Recurrent Selection in Two Iowa Maize (Zea Mays L.) Populations by : Lori Lynn Hinze

Download or read book Molecular Marker Analysis of Population Genetic Structure and Progress from Reciprocal Recurrent Selection in Two Iowa Maize (Zea Mays L.) Populations written by Lori Lynn Hinze and published by . This book was released on 2003 with total page 208 pages. Available in PDF, EPUB and Kindle. Book excerpt: Studies of the genetic structure of the Iowa Corn Borer Synthetic #1 (CB) and Iowa Stiff Stalk Synthetic (SS) maize populations are of particular significance because they serve as the model on which development of modern commercial hybrids are based. These populations are part of a reciprocal recurrent selection breeding strategy. With this strategy, plants from one population are crossed to plants from the opposite population (i.e. forming hybrids). These hybrids are tested, and the best ones are chosen. The plants crossed to form the chosen hybrids are identified and used to form the next generation in each population. The goal of each successive generation is to improve on the previous generation while maintaining variability within the populations. We measured the progress of this program by testing for between- and within-population level genetic differentiation by analyzing the variation at 86 SSR loci among plants sampled from eight groups (progenitors, Cycle 0, Cycle 1, Cycle 3, Cycle 6, Cycle 9, Cycle 12, and Cycle 15) in each population. The progenitors used to form these populations are highly polymorphic (3.8 alleles/locus and 0.56 expected heterozygosity). This polymorphism decreases through Cycle 15 (1.9 alleles/locus and 0.25 expected heterozygosity). Individual plants within groups have a larger amount of genetic variation (66%) than groups within each population (13%) or between populations (21%). Consistent with theoretical expectations is the repartitioning of variation from within populations (96% in progenitors) to between populations (58% in Cycle 15) over time. When testing for deviations from natural processes, we identified approximately 26 of the 86 SSR loci affected by a non-random process over time. These results implicate genetic drift with a more profound effect than artificial selection in small populations. Through the use of smaller sample sizes, we were able to analyze more intermediate groups than any previous work in these populations. These intermediate time points represent a comprehensive genetic look within CB and SS to evaluate the applied effectiveness of the reciprocal recurrent selection program in relationship to its theoretical framework.

Quantitative Genetics in Maize Breeding

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Publisher : Springer Science & Business Media
ISBN 13 : 1441907661
Total Pages : 669 pages
Book Rating : 4.4/5 (419 download)

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Book Synopsis Quantitative Genetics in Maize Breeding by : Arnel R. Hallauer

Download or read book Quantitative Genetics in Maize Breeding written by Arnel R. Hallauer and published by Springer Science & Business Media. This book was released on 2010-09-28 with total page 669 pages. Available in PDF, EPUB and Kindle. Book excerpt: Maize is used in an endless list of products that are directly or indirectly related to human nutrition and food security. Maize is grown in producer farms, farmers depend on genetically improved cultivars, and maize breeders develop improved maize cultivars for farmers. Nikolai I. Vavilov defined plant breeding as plant evolution directed by man. Among crops, maize is one of the most successful examples for breeder-directed evolution. Maize is a cross-pollinated species with unique and separate male and female organs allowing techniques from both self and cross-pollinated crops to be utilized. As a consequence, a diverse set of breeding methods can be utilized for the development of various maize cultivar types for all economic conditions (e.g., improved populations, inbred lines, and their hybrids for different types of markets). Maize breeding is the science of maize cultivar development. Public investment in maize breeding from 1865 to 1996 was $3 billion (Crosbie et al., 2004) and the return on investment was $260 billion as a consequence of applied maize breeding, even without full understanding of the genetic basis of heterosis. The principles of quantitative genetics have been successfully applied by maize breeders worldwide to adapt and improve germplasm sources of cultivars for very simple traits (e.g. maize flowering) and very complex ones (e.g., grain yield). For instance, genomic efforts have isolated early-maturing genes and QTL for potential MAS but very simple and low cost phenotypic efforts have caused significant and fast genetic progress across genotypes moving elite tropical and late temperate maize northward with minimal investment. Quantitative genetics has allowed the integration of pre-breeding with cultivar development by characterizing populations genetically, adapting them to places never thought of (e.g., tropical to short-seasons), improving them by all sorts of intra- and inter-population recurrent selection methods, extracting lines with more probability of success, and exploiting inbreeding and heterosis. Quantitative genetics in maize breeding has improved the odds of developing outstanding maize cultivars from genetically broad based improved populations such as B73. The inbred-hybrid concept in maize was a public sector invention 100 years ago and it is still considered one of the greatest achievements in plant breeding. Maize hybrids grown by farmers today are still produced following this methodology and there is still no limit to genetic improvement when most genes are targeted in the breeding process. Heterotic effects are unique for each hybrid and exotic genetic materials (e.g., tropical, early maturing) carry useful alleles for complex traits not present in the B73 genome just sequenced while increasing the genetic diversity of U.S. hybrids. Breeding programs based on classical quantitative genetics and selection methods will be the basis for proving theoretical approaches on breeding plans based on molecular markers. Mating designs still offer large sample sizes when compared to QTL approaches and there is still a need to successful integration of these methods. There is a need to increase the genetic diversity of maize hybrids available in the market (e.g., there is a need to increase the number of early maturing testers in the northern U.S.). Public programs can still develop new and genetically diverse products not available in industry. However, public U.S. maize breeding programs have either been discontinued or are eroding because of decreasing state and federal funding toward basic science. Future significant genetic gains in maize are dependent on the incorporation of useful and unique genetic diversity not available in industry (e.g., NDSU EarlyGEM lines). The integration of pre-breeding methods with cultivar development should enhance future breeding efforts to maintain active public breeding programs not only adapting and improving genetically broad-based germplasm but also developing unique products and training the next generation of maize breeders producing research dissertations directly linked to breeding programs. This is especially important in areas where commercial hybrids are not locally bred. More than ever public and private institutions are encouraged to cooperate in order to share breeding rights, research goals, winter nurseries, managed stress environments, and latest technology for the benefit of producing the best possible hybrids for farmers with the least cost. We have the opportunity to link both classical and modern technology for the benefit of breeding in close cooperation with industry without the need for investing in academic labs and time (e.g., industry labs take a week vs months/years in academic labs for the same work). This volume, as part of the Handbook of Plant Breeding series, aims to increase awareness of the relative value and impact of maize breeding for food, feed, and fuel security. Without breeding programs continuously developing improved germplasm, no technology can develop improved cultivars. Quantitative Genetics in Maize Breeding presents principles and data that can be applied to maximize genetic improvement of germplasm and develop superior genotypes in different crops. The topics included should be of interest of graduate students and breeders conducting research not only on breeding and selection methods but also developing pure lines and hybrid cultivars in crop species. This volume is a unique and permanent contribution to breeders, geneticists, students, policy makers, and land-grant institutions still promoting quality research in applied plant breeding as opposed to promoting grant monies and indirect costs at any short-term cost. The book is dedicated to those who envision the development of the next generation of cultivars with less need of water and inputs, with better nutrition; and with higher percentages of exotic germplasm as well as those that pursue independent research goals before searching for funding. Scientists are encouraged to use all possible breeding methodologies available (e.g., transgenics, classical breeding, MAS, and all possible combinations could be used with specific sound long and short-term goals on mind) once germplasm is chosen making wise decisions with proven and scientifically sound technologies for assisting current breeding efforts depending on the particular trait under selection. Arnel R. Hallauer is C. F. Curtiss Distinguished Professor in Agriculture (Emeritus) at Iowa State University (ISU). Dr. Hallauer has led maize-breeding research for mid-season maturity at ISU since 1958. His work has had a worldwide impact on plant-breeding programs, industry, and students and was named a member of the National Academy of Sciences. Hallauer is a native of Kansas, USA. José B. Miranda Filho is full-professor in the Department of Genetics, Escola Superior de Agricultura Luiz de Queiroz - University of São Paulo located at Piracicaba, Brazil. His research interests have emphasized development of quantitative genetic theory and its application to maize breeding. Miranda Filho is native of Pirassununga, São Paulo, Brazil. M.J. Carena is professor of plant sciences at North Dakota State University (NDSU). Dr. Carena has led maize-breeding research for short-season maturity at NDSU since 1999. This program is currently one the of the few public U.S. programs left integrating pre-breeding with cultivar development and training in applied maize breeding. He teaches Quantitative Genetics and Crop Breeding Techniques at NDSU. Carena is a native of Buenos Aires, Argentina. http://www.ag.ndsu.nodak.edu/plantsci/faculty/Carena.htm

Dissertation Abstracts International

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ISBN 13 :
Total Pages : 692 pages
Book Rating : 4.F/5 ( download)

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Book Synopsis Dissertation Abstracts International by :

Download or read book Dissertation Abstracts International written by and published by . This book was released on 2004 with total page 692 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Evaluation of Progress in Recurrent Selection for Specific Combining Ability in Two Open-pollinated Maize (Zea Mays L.) Varieties

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ISBN 13 :
Total Pages : 334 pages
Book Rating : 4.:/5 (19 download)

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Book Synopsis Evaluation of Progress in Recurrent Selection for Specific Combining Ability in Two Open-pollinated Maize (Zea Mays L.) Varieties by : Ronald N. Walejko

Download or read book Evaluation of Progress in Recurrent Selection for Specific Combining Ability in Two Open-pollinated Maize (Zea Mays L.) Varieties written by Ronald N. Walejko and published by . This book was released on 1976 with total page 334 pages. Available in PDF, EPUB and Kindle. Book excerpt: To decide upon the most efficient breeding and testing procedures to improve maize populations, the plant breeder must have adequate knowledge of the type of gene action involved in yield heterosis. Two types of gene action have been postulated to account for yield heterosis in maize: dominance and overdominance. Recurrent selection of specific combining ability and for general combining ability have been proposed as methods to improve maize populations. Recurrent selection for specific combining ability uses a narow genetic base tester and originally was proposed on the assumption that overdominance is the main type of gene action responsible for yield heterosis. Conversely, selection for general combining ability uses a broad genetic base tester and assumes that dominant, favorable factors are concerned in yield heterosis. A procedure was proposed to compare the relative importance of dominance and overdominance in yield heterosis. This procedure involved recurrent relection for specific combining ability in two heterozygous source populations with a common inbred line tester. The purpose of this study was to evaluate progress in 5 cycles of recurrent slection for specific combining ability in two open-pollinated maize varieties and to determine the type of gene action involved in yield heterosis. The two source populations were the open-pollinated varieties, Kolkmeier and Lancaster, and the inbred line, Hy, was used as the common tester. After 5 cycles of recurrent selection, 6 population (C0 to C5) from (...).

One Vs Two Genetic Pools for Full-sib Reciprocal Recurrent Selection in Maize (Zea Mays L.)

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ISBN 13 :
Total Pages : 250 pages
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Book Synopsis One Vs Two Genetic Pools for Full-sib Reciprocal Recurrent Selection in Maize (Zea Mays L.) by : José Luis De León

Download or read book One Vs Two Genetic Pools for Full-sib Reciprocal Recurrent Selection in Maize (Zea Mays L.) written by José Luis De León and published by . This book was released on 1979 with total page 250 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Evaluation of Two Maize Populations After Eight Cycles of Reciprocal Recurrent Selection

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ISBN 13 :
Total Pages : 296 pages
Book Rating : 4.:/5 (791 download)

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Book Synopsis Evaluation of Two Maize Populations After Eight Cycles of Reciprocal Recurrent Selection by : Thomas Craig Kevern

Download or read book Evaluation of Two Maize Populations After Eight Cycles of Reciprocal Recurrent Selection written by Thomas Craig Kevern and published by . This book was released on 1981 with total page 296 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Genetic Analysis of Grain Yield and Associated Characters in Two Maize Populations (Ashwini and Harsha) Through Reciprocal Recurrent Selection

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ISBN 13 :
Total Pages : 161 pages
Book Rating : 4.:/5 (73 download)

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Book Synopsis Genetic Analysis of Grain Yield and Associated Characters in Two Maize Populations (Ashwini and Harsha) Through Reciprocal Recurrent Selection by : Umakanth U. Akula

Download or read book Genetic Analysis of Grain Yield and Associated Characters in Two Maize Populations (Ashwini and Harsha) Through Reciprocal Recurrent Selection written by Umakanth U. Akula and published by . This book was released on 1997 with total page 161 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Commencement

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ISBN 13 :
Total Pages : 562 pages
Book Rating : 4.:/5 (318 download)

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Book Synopsis Commencement by : Iowa State University

Download or read book Commencement written by Iowa State University and published by . This book was released on 2001 with total page 562 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Molecular Marker Analysis of a Replicated Recurrent Selection Program in Maize

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ISBN 13 :
Total Pages : 204 pages
Book Rating : 4.:/5 (34 download)

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Book Synopsis Molecular Marker Analysis of a Replicated Recurrent Selection Program in Maize by : Kristi L. Hill

Download or read book Molecular Marker Analysis of a Replicated Recurrent Selection Program in Maize written by Kristi L. Hill and published by . This book was released on 1995 with total page 204 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Genetic Diversity Among Progenitors and Derived Lines of Two Maize (Zea Mays L.) Populations

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ISBN 13 :
Total Pages : 226 pages
Book Rating : 4.:/5 (622 download)

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Book Synopsis Genetic Diversity Among Progenitors and Derived Lines of Two Maize (Zea Mays L.) Populations by : James R. Rouse

Download or read book Genetic Diversity Among Progenitors and Derived Lines of Two Maize (Zea Mays L.) Populations written by James R. Rouse and published by . This book was released on 2004 with total page 226 pages. Available in PDF, EPUB and Kindle. Book excerpt: Forty-six inbreds related to Iowa Stiff Stalk Synthetic (BSSS) and Iowa Corn Borer Synthetic #1 (BSCB1) were assayed for polymorphism at 227 microsatellite loci. The inbreds consisted of progenitors of BSSS and BSCB1 as well as elite lines derived from those populations. Diversity statistics were used to estimate genetic variability among the derived lines, and to locate regions of the maize genome that have changed as a result of artificial selection. The four groups of germplasm were labeled CBP and SSP for the progenitors of BSCB1 and BSSS, respectively, and CBL and SSL for the lines derived from BSCB1 and BSSS, respectively. There were means of 3.5 and 3.4 alleles per locus among the CBP and SSP, respectively, and 2.3 and 2.5 alleles per locus among the CBL and SSL. As expected, many more alleles were found in the progenitor groups than in the groups of derived lines. CBL showed only 60% of the alleles found in CBP, while SSL had 66% of the alleles found in SSP. Supporting previous studies in this area, we found that 26% of the alleles in SSP were unique to a single inbred. In CBP, 32% of the alleles were unique, a figure slightly higher than previous results in BSCB1 or BSSS. Of the unique alleles in both progenitor groups, 73% were not found in any of the derived lines. There were 33 marker loci in BSSS and 18 marker loci in BSCB1 that exhibited reductions in gene diversity that can be attributed to artificial selection (P = 0.1). Genetic distance between the progenitor groups was very low, indicating the progenitors were not highly divergent from each other. Rogers's distance (RD) between progenitor groups and derived line groups was identical in both BSSS and BSCB1, suggesting that the derived lines are equally divergent from their respective progenitor groups. The largest RD was between the two derived-line groups, about 35% greater than the progenitor-to-derived line distance. Rogers's distance between individual derived lines ranged from 15 to 54 in SSL and 25 to 56 in CBL, indicating some of the derived lines are very closely related.

Effects of a Long-term Recurrent Selection Program on the Genetic Structure of the BSSS Maize Population

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ISBN 13 :
Total Pages : 198 pages
Book Rating : 4.:/5 (496 download)

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Book Synopsis Effects of a Long-term Recurrent Selection Program on the Genetic Structure of the BSSS Maize Population by : Paulo Evaristo de Oliveira Guimarães

Download or read book Effects of a Long-term Recurrent Selection Program on the Genetic Structure of the BSSS Maize Population written by Paulo Evaristo de Oliveira Guimarães and published by . This book was released on 2001 with total page 198 pages. Available in PDF, EPUB and Kindle. Book excerpt: Evaluating of Recurrent Selection (RS) programs can lead to increase knowledge of methods, populations, and traits and give support for better management of breeding programs. The objective herein was to evaluate the effects of seven cycles of half-sib selection followed by seven cycles of S2 selection on the genetic structure of BSSS maize population. Individuals from BSSSP (progenitor lines), BS13(S)CO (original S2 selection), and BS13(S)C7 (7th S2 cycle) cycles were genotyped based on a sample of 105 RFLP loci. Measures of genetic variation within (expected heterozygosity, number of allelles, average frequency of the most common allele, and proportion of polymorphic loci) and among (Principal Component Analysis and Nei's genetic distance, NGD) cycles of selection indicated BSSSP has a considerable genetic variability, substantial loss a variation and increase of divergence over the cycles of selection, greatest loss of diversity occurred during the HS selection program, future cycles of RS are predicted to have narrow genetic variation, and low average effective population size was an important factor in loss of genetic variation. Changes in allele frequencies for about 30% of the loci cannot be explained by genetic drift alone, suggesting that selection also was an important factor of variation. The majority of loci in C0 and C7 were in H-W equilibrium. Progenitor lines Illinois Hy had a lower NGD to C0 and C7 and five of its unique had frequencies significantly increased in later generations, indicating a selective advantage over the cycles of RS. Hybrid Hy x LE 23 showed the lowest NGD to C0 and C7 populations. NGD among parental lines was not a good predictor of single-crosses yield performance. A founder effect observed herein may explain partially reduced genetic gains during the S2-selection period reported in other studies. Limited RFLP diversity in BS13(S)C7 suggests this population may not have enough genetic variability to sustain significant long-term genetic gains per se for grain yield. RFLP data were useful tools to evaluate this RS program. However, much more information could be obtained about recurrent selection programs by integrating of molecular (a standard set of marker loci) and phenotypic data.

Changes in Genetic Variance After Eleven Cycles of Reciprocal Recurrent Selection in BSSS and BSCB1 Maize Populations

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ISBN 13 :
Total Pages : 182 pages
Book Rating : 4.:/5 (246 download)

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Book Synopsis Changes in Genetic Variance After Eleven Cycles of Reciprocal Recurrent Selection in BSSS and BSCB1 Maize Populations by : Bruce John Schnicker

Download or read book Changes in Genetic Variance After Eleven Cycles of Reciprocal Recurrent Selection in BSSS and BSCB1 Maize Populations written by Bruce John Schnicker and published by . This book was released on 1991 with total page 182 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Evaluation of S1 Lines from Original and Advanced Populations of Two Maize Varieties to Determine the Effects of Reciprocal Recurrent Selection

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ISBN 13 :
Total Pages : 168 pages
Book Rating : 4.:/5 (682 download)

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Book Synopsis Evaluation of S1 Lines from Original and Advanced Populations of Two Maize Varieties to Determine the Effects of Reciprocal Recurrent Selection by : Kathleen Ann Grady

Download or read book Evaluation of S1 Lines from Original and Advanced Populations of Two Maize Varieties to Determine the Effects of Reciprocal Recurrent Selection written by Kathleen Ann Grady and published by . This book was released on 1980 with total page 168 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Evaluation of Reciprocal Recurrent Selection for Grain Yield in Maize (Z. Mays L)

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ISBN 13 :
Total Pages : 258 pages
Book Rating : 4.:/5 (221 download)

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Book Synopsis Evaluation of Reciprocal Recurrent Selection for Grain Yield in Maize (Z. Mays L) by : Seme Debela

Download or read book Evaluation of Reciprocal Recurrent Selection for Grain Yield in Maize (Z. Mays L) written by Seme Debela and published by . This book was released on 1972 with total page 258 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Analysis of the Maize (Zea Mays L.) Genome Using Molecular, Genetic and Computational Approaches

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ISBN 13 :
Total Pages : 236 pages
Book Rating : 4.:/5 (145 download)

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Book Synopsis Analysis of the Maize (Zea Mays L.) Genome Using Molecular, Genetic and Computational Approaches by : Yan Fu

Download or read book Analysis of the Maize (Zea Mays L.) Genome Using Molecular, Genetic and Computational Approaches written by Yan Fu and published by . This book was released on 2005 with total page 236 pages. Available in PDF, EPUB and Kindle. Book excerpt: Approximately 80% of [difference]2,500 Mbp maize genome consists of highly repetitive sequences. Initial sequencing efforts have targeted the gene-rich regions of this genome. A new open reading frame (ORF) selecting vector (pORF-Rescue) was developed to efficiently distinguish between the coding and non-coding fractions of this complex genome. pORF-Rescue can enrich ORFs by [difference]15 fold and non-transposon coding sequences by [difference]3.6 fold. This vector can also be applied for rapid gene discovery from maize BAC DNA and to establish peptide/expression libraries. Methylation filtration (MF) and high-Cot (HC) sequencing strategies have also proven successful in maize gene-enrichment. To best utilize MF and HC genome survey sequences (GSSs), these GSS data were first examined by identifying types and frequencies of sequencing errors and then assembled into maize assembled genomic islands (MAGIs). Computational and biological quality assessments indicate that a very high percentage of the MAGIs accurately reflect the structure of the maize genome. In addition, we estimate that this assembly of the maize gene space has "tagged" >6,900 expressed genes that previously lacked evidence of transcription and that almost 350 of these expressed genes are "orphans"; i.e., they do not exhibit similarity to genes in other species. To construct a sequence-based maize genetic map using large-scale genie sequence data and intermated B73xMo17 recombinant inbred lines (IRILs) as mapping population will facilitate the map-based genome sequencing project, QTL and eQTL studies, and candidate gene cloning experiments. The observations that two segregation distortion regions overlap with maize flowering time QTLs suggest that the altered allele frequencies were a consequence of inadvertent selection during the development of the IBM IRILs. Detection of inter-chromosomal two-locus gamete disequilibrium suggests another means to discover potential functional relationships (e.g. epistasis) of different chromosome regions using well-characterized plant RILs.

Response to Full-sib Reciprocal Recurrent Selection in a Double-cross Maize Population

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Total Pages : 128 pages
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Book Synopsis Response to Full-sib Reciprocal Recurrent Selection in a Double-cross Maize Population by : Eduardo J. Graterol M.

Download or read book Response to Full-sib Reciprocal Recurrent Selection in a Double-cross Maize Population written by Eduardo J. Graterol M. and published by . This book was released on 2005 with total page 128 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Estimates of Genetic Variability and Gene Action in Two Maize (Zea Mays L.) Populations

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ISBN 13 :
Total Pages : 206 pages
Book Rating : 4.:/5 (183 download)

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Book Synopsis Estimates of Genetic Variability and Gene Action in Two Maize (Zea Mays L.) Populations by : Geng-Chen Han

Download or read book Estimates of Genetic Variability and Gene Action in Two Maize (Zea Mays L.) Populations written by Geng-Chen Han and published by . This book was released on 1987 with total page 206 pages. Available in PDF, EPUB and Kindle. Book excerpt: