Introduction To Hpc With Mpi For Data Science

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Introduction to HPC with MPI for Data Science

Author : Frank Nielsen
Publisher : Springer
ISBN 13 : 3319219030
Total Pages : 304 pages
Book Rating : 4.3/5 (192 download)

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Book Synopsis Introduction to HPC with MPI for Data Science by : Frank Nielsen

Download or read book Introduction to HPC with MPI for Data Science written by Frank Nielsen and published by Springer. This book was released on 2016-02-03 with total page 304 pages. Available in PDF, EPUB and Kindle. Book excerpt: This gentle introduction to High Performance Computing (HPC) for Data Science using the Message Passing Interface (MPI) standard has been designed as a first course for undergraduates on parallel programming on distributed memory models, and requires only basic programming notions. Divided into two parts the first part covers high performance computing using C++ with the Message Passing Interface (MPI) standard followed by a second part providing high-performance data analytics on computer clusters. In the first part, the fundamental notions of blocking versus non-blocking point-to-point communications, global communications (like broadcast or scatter) and collaborative computations (reduce), with Amdalh and Gustafson speed-up laws are described before addressing parallel sorting and parallel linear algebra on computer clusters. The common ring, torus and hypercube topologies of clusters are then explained and global communication procedures on these topologies are studied. This first part closes with the MapReduce (MR) model of computation well-suited to processing big data using the MPI framework. In the second part, the book focuses on high-performance data analytics. Flat and hierarchical clustering algorithms are introduced for data exploration along with how to program these algorithms on computer clusters, followed by machine learning classification, and an introduction to graph analytics. This part closes with a concise introduction to data core-sets that let big data problems be amenable to tiny data problems. Exercises are included at the end of each chapter in order for students to practice the concepts learned, and a final section contains an overall exam which allows them to evaluate how well they have assimilated the material covered in the book.

Introduction to High Performance Computing for Scientists and Engineers

Author : Georg Hager
Publisher : CRC Press
ISBN 13 : 1439811938
Total Pages : 350 pages
Book Rating : 4.4/5 (398 download)

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Book Synopsis Introduction to High Performance Computing for Scientists and Engineers by : Georg Hager

Download or read book Introduction to High Performance Computing for Scientists and Engineers written by Georg Hager and published by CRC Press. This book was released on 2010-07-02 with total page 350 pages. Available in PDF, EPUB and Kindle. Book excerpt: Written by high performance computing (HPC) experts, Introduction to High Performance Computing for Scientists and Engineers provides a solid introduction to current mainstream computer architecture, dominant parallel programming models, and useful optimization strategies for scientific HPC. From working in a scientific computing center, the author

Introduction to High Performance Scientific Computing

Author : Victor Eijkhout
Publisher : Lulu.com
ISBN 13 : 1257992546
Total Pages : 536 pages
Book Rating : 4.2/5 (579 download)

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Book Synopsis Introduction to High Performance Scientific Computing by : Victor Eijkhout

Download or read book Introduction to High Performance Scientific Computing written by Victor Eijkhout and published by Lulu.com. This book was released on 2010 with total page 536 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is a textbook that teaches the bridging topics between numerical analysis, parallel computing, code performance, large scale applications.

High Performance Computing

Author : John Levesque
Publisher : CRC Press
ISBN 13 : 1420077066
Total Pages : 244 pages
Book Rating : 4.4/5 (2 download)

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Book Synopsis High Performance Computing by : John Levesque

Download or read book High Performance Computing written by John Levesque and published by CRC Press. This book was released on 2010-12-14 with total page 244 pages. Available in PDF, EPUB and Kindle. Book excerpt: High Performance Computing: Programming and Applications presents techniques that address new performance issues in the programming of high performance computing (HPC) applications. Omitting tedious details, the book discusses hardware architecture concepts and programming techniques that are the most pertinent to application developers for achievi

Supercomputing Frontiers

Author : Rio Yokota
Publisher : Springer
ISBN 13 : 3319699539
Total Pages : 293 pages
Book Rating : 4.3/5 (196 download)

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Book Synopsis Supercomputing Frontiers by : Rio Yokota

Download or read book Supercomputing Frontiers written by Rio Yokota and published by Springer. This book was released on 2018-03-20 with total page 293 pages. Available in PDF, EPUB and Kindle. Book excerpt: It constitutes the refereed proceedings of the 4th Asian Supercomputing Conference, SCFA 2018, held in Singapore in March 2018. Supercomputing Frontiers will be rebranded as Supercomputing Frontiers Asia (SCFA), which serves as the technical programme for SCA18. The technical programme for SCA18 consists of four tracks: Application, Algorithms & Libraries Programming System Software Architecture, Network/Communications & Management Data, Storage & Visualisation The 20 papers presented in this volume were carefully reviewed nd selected from 60 submissions.

Parallel and High Performance Computing

Author : Robert Robey
Publisher : Simon and Schuster
ISBN 13 : 1638350388
Total Pages : 702 pages
Book Rating : 4.6/5 (383 download)

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Book Synopsis Parallel and High Performance Computing by : Robert Robey

Download or read book Parallel and High Performance Computing written by Robert Robey and published by Simon and Schuster. This book was released on 2021-08-24 with total page 702 pages. Available in PDF, EPUB and Kindle. Book excerpt: Parallel and High Performance Computing offers techniques guaranteed to boost your code’s effectiveness. Summary Complex calculations, like training deep learning models or running large-scale simulations, can take an extremely long time. Efficient parallel programming can save hours—or even days—of computing time. Parallel and High Performance Computing shows you how to deliver faster run-times, greater scalability, and increased energy efficiency to your programs by mastering parallel techniques for multicore processor and GPU hardware. About the technology Write fast, powerful, energy efficient programs that scale to tackle huge volumes of data. Using parallel programming, your code spreads data processing tasks across multiple CPUs for radically better performance. With a little help, you can create software that maximizes both speed and efficiency. About the book Parallel and High Performance Computing offers techniques guaranteed to boost your code’s effectiveness. You’ll learn to evaluate hardware architectures and work with industry standard tools such as OpenMP and MPI. You’ll master the data structures and algorithms best suited for high performance computing and learn techniques that save energy on handheld devices. You’ll even run a massive tsunami simulation across a bank of GPUs. What's inside Planning a new parallel project Understanding differences in CPU and GPU architecture Addressing underperforming kernels and loops Managing applications with batch scheduling About the reader For experienced programmers proficient with a high-performance computing language like C, C++, or Fortran. About the author Robert Robey works at Los Alamos National Laboratory and has been active in the field of parallel computing for over 30 years. Yuliana Zamora is currently a PhD student and Siebel Scholar at the University of Chicago, and has lectured on programming modern hardware at numerous national conferences. Table of Contents PART 1 INTRODUCTION TO PARALLEL COMPUTING 1 Why parallel computing? 2 Planning for parallelization 3 Performance limits and profiling 4 Data design and performance models 5 Parallel algorithms and patterns PART 2 CPU: THE PARALLEL WORKHORSE 6 Vectorization: FLOPs for free 7 OpenMP that performs 8 MPI: The parallel backbone PART 3 GPUS: BUILT TO ACCELERATE 9 GPU architectures and concepts 10 GPU programming model 11 Directive-based GPU programming 12 GPU languages: Getting down to basics 13 GPU profiling and tools PART 4 HIGH PERFORMANCE COMPUTING ECOSYSTEMS 14 Affinity: Truce with the kernel 15 Batch schedulers: Bringing order to chaos 16 File operations for a parallel world 17 Tools and resources for better code

Parallel I/O for High Performance Computing

Author : John M. May
Publisher : Morgan Kaufmann
ISBN 13 : 9781558606647
Total Pages : 392 pages
Book Rating : 4.6/5 (66 download)

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Book Synopsis Parallel I/O for High Performance Computing by : John M. May

Download or read book Parallel I/O for High Performance Computing written by John M. May and published by Morgan Kaufmann. This book was released on 2001 with total page 392 pages. Available in PDF, EPUB and Kindle. Book excerpt: "I enjoyed reading this book immensely. The author was uncommonly careful in his explanations. I'd recommend this book to anyone writing scientific application codes." -Peter S. Pacheco, University of San Francisco "This text provides a useful overview of an area that is currently not addressed in any book. The presentation of parallel I/O issues across all levels of abstraction is this book's greatest strength." -Alan Sussman, University of Maryland Scientific and technical programmers can no longer afford to treat I/O as an afterthought. The speed, memory size, and disk capacity of parallel computers continue to grow rapidly, but the rate at which disk drives can read and write data is improving far less quickly. As a result, the performance of carefully tuned parallel programs can slow dramatically when they read or write files-and the problem is likely to get far worse. Parallel input and output techniques can help solve this problem by creating multiple data paths between memory and disks. However, simply adding disk drives to an I/O system without considering the overall software design will not significantly improve performance. To reap the full benefits of a parallel I/O system, application programmers must understand how parallel I/O systems work and where the performance pitfalls lie. Parallel I/O for High Performance Computing directly addresses this critical need by examining parallel I/O from the bottom up. This important new book is recommended to anyone writing scientific application codes as the best single source on I/O techniques and to computer scientists as a solid up-to-date introduction to parallel I/O research. Features: An overview of key I/O issues at all levels of abstraction-including hardware, through the OS and file systems, up to very high-level scientific libraries. Describes the important features of MPI-IO, netCDF, and HDF-5 and presents numerous examples illustrating how to use each of these I/O interfaces. Addresses the basic question of how to read and write data efficiently in HPC applications. An explanation of various layers of storage - and techniques for using disks (and sometimes tapes) effectively in HPC applications.

Introduction to Parallel Computing

Author : Ananth Grama
Publisher : Pearson Education
ISBN 13 : 9780201648652
Total Pages : 664 pages
Book Rating : 4.6/5 (486 download)

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Book Synopsis Introduction to Parallel Computing by : Ananth Grama

Download or read book Introduction to Parallel Computing written by Ananth Grama and published by Pearson Education. This book was released on 2003 with total page 664 pages. Available in PDF, EPUB and Kindle. Book excerpt: A complete source of information on almost all aspects of parallel computing from introduction, to architectures, to programming paradigms, to algorithms, to programming standards. It covers traditional Computer Science algorithms, scientific computing algorithms and data intensive algorithms.

An Introduction to High-performance Scientific Computing

Author : Lloyd Dudley Fosdick
Publisher : MIT Press
ISBN 13 : 9780262061810
Total Pages : 838 pages
Book Rating : 4.0/5 (618 download)

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Book Synopsis An Introduction to High-performance Scientific Computing by : Lloyd Dudley Fosdick

Download or read book An Introduction to High-performance Scientific Computing written by Lloyd Dudley Fosdick and published by MIT Press. This book was released on 1996 with total page 838 pages. Available in PDF, EPUB and Kindle. Book excerpt: Designed for undergraduates, An Introduction to High-Performance Scientific Computing assumes a basic knowledge of numerical computation and proficiency in Fortran or C programming and can be used in any science, computer science, applied mathematics, or engineering department or by practicing scientists and engineers, especially those associated with one of the national laboratories or supercomputer centers. This text evolved from a new curriculum in scientific computing that was developed to teach undergraduate science and engineering majors how to use high-performance computing systems (supercomputers) in scientific and engineering applications. Designed for undergraduates, An Introduction to High-Performance Scientific Computing assumes a basic knowledge of numerical computation and proficiency in Fortran or C programming and can be used in any science, computer science, applied mathematics, or engineering department or by practicing scientists and engineers, especially those associated with one of the national laboratories or supercomputer centers. The authors begin with a survey of scientific computing and then provide a review of background (numerical analysis, IEEE arithmetic, Unix, Fortran) and tools (elements of MATLAB, IDL, AVS). Next, full coverage is given to scientific visualization and to the architectures (scientific workstations and vector and parallel supercomputers) and performance evaluation needed to solve large-scale problems. The concluding section on applications includes three problems (molecular dynamics, advection, and computerized tomography) that illustrate the challenge of solving problems on a variety of computer architectures as well as the suitability of a particular architecture to solving a particular problem. Finally, since this can only be a hands-on course with extensive programming and experimentation with a variety of architectures and programming paradigms, the authors have provided a laboratory manual and supporting software via anonymous ftp. Scientific and Engineering Computation series

Recent Advancement in Geoinformatics and Data Science

Author : Xiaogang Ma
Publisher : Geological Society of America
ISBN 13 : 0813725585
Total Pages : 180 pages
Book Rating : 4.8/5 (137 download)

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Book Synopsis Recent Advancement in Geoinformatics and Data Science by : Xiaogang Ma

Download or read book Recent Advancement in Geoinformatics and Data Science written by Xiaogang Ma and published by Geological Society of America. This book was released on 2023-04-11 with total page 180 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Data Science in Engineering, Volume 9

Author : Ramin Madarshahian
Publisher : Springer Nature
ISBN 13 : 3030760049
Total Pages : 287 pages
Book Rating : 4.0/5 (37 download)

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Book Synopsis Data Science in Engineering, Volume 9 by : Ramin Madarshahian

Download or read book Data Science in Engineering, Volume 9 written by Ramin Madarshahian and published by Springer Nature. This book was released on 2021-10-04 with total page 287 pages. Available in PDF, EPUB and Kindle. Book excerpt: Data Science and Engineering Volume 9: Proceedings of the 39th IMAC, A Conference and Exposition on Structural Dynamics, 2021, the ninth volume of nine from the Conference, brings together contributions to this important area of research and engineering. The collection presents early findings and case studies on fundamental and applied aspects of Data Science in Engineering, including papers on: Data Science in Engineering Applications Engineering Mathematics Computational Methods in Engineering

A Practical Approach to High-Performance Computing

Author : Sergei Kurgalin
Publisher : Springer Nature
ISBN 13 : 3030275582
Total Pages : 206 pages
Book Rating : 4.0/5 (32 download)

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Book Synopsis A Practical Approach to High-Performance Computing by : Sergei Kurgalin

Download or read book A Practical Approach to High-Performance Computing written by Sergei Kurgalin and published by Springer Nature. This book was released on 2019-11-10 with total page 206 pages. Available in PDF, EPUB and Kindle. Book excerpt: The book discusses the fundamentals of high-performance computing. The authors combine visualization, comprehensibility, and strictness in their material presentation, and thus influence the reader towards practical application and learning how to solve real computing problems. They address both key approaches to programming modern computing systems: multithreading-based parallelizing in shared memory systems, and applying message-passing technologies in distributed systems. The book is suitable for undergraduate and graduate students, and for researchers and practitioners engaged with high-performance computing systems. Each chapter begins with a theoretical part, where the relevant terminology is introduced along with the basic theoretical results and methods of parallel programming, and concludes with a list of test questions and problems of varying difficulty. The authors include many solutions and hints, and often sample code.

Techniques for Optimizing Applications

Author : Rajat P. Garg
Publisher : Prentice Hall PTR
ISBN 13 :
Total Pages : 680 pages
Book Rating : 4.3/5 (91 download)

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Book Synopsis Techniques for Optimizing Applications by : Rajat P. Garg

Download or read book Techniques for Optimizing Applications written by Rajat P. Garg and published by Prentice Hall PTR. This book was released on 2002 with total page 680 pages. Available in PDF, EPUB and Kindle. Book excerpt: Software -- Programming Techniques.

Intel Xeon Phi Coprocessor High Performance Programming

Author : James Jeffers
Publisher : Newnes
ISBN 13 : 0124104940
Total Pages : 432 pages
Book Rating : 4.1/5 (241 download)

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Book Synopsis Intel Xeon Phi Coprocessor High Performance Programming by : James Jeffers

Download or read book Intel Xeon Phi Coprocessor High Performance Programming written by James Jeffers and published by Newnes. This book was released on 2013-02-11 with total page 432 pages. Available in PDF, EPUB and Kindle. Book excerpt: Authors Jim Jeffers and James Reinders spent two years helping educate customers about the prototype and pre-production hardware before Intel introduced the first Intel Xeon Phi coprocessor. They have distilled their own experiences coupled with insights from many expert customers, Intel Field Engineers, Application Engineers and Technical Consulting Engineers, to create this authoritative first book on the essentials of programming for this new architecture and these new products. This book is useful even before you ever touch a system with an Intel Xeon Phi coprocessor. To ensure that your applications run at maximum efficiency, the authors emphasize key techniques for programming any modern parallel computing system whether based on Intel Xeon processors, Intel Xeon Phi coprocessors, or other high performance microprocessors. Applying these techniques will generally increase your program performance on any system, and better prepare you for Intel Xeon Phi coprocessors and the Intel MIC architecture. A practical guide to the essentials of the Intel Xeon Phi coprocessor Presents best practices for portable, high-performance computing and a familiar and proven threaded, scalar-vector programming model Includes simple but informative code examples that explain the unique aspects of this new highly parallel and high performance computational product Covers wide vectors, many cores, many threads and high bandwidth cache/memory architecture

High-Performance Computing

Author : Laurence T. Yang
Publisher : John Wiley & Sons
ISBN 13 : 0471732702
Total Pages : 818 pages
Book Rating : 4.4/5 (717 download)

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Book Synopsis High-Performance Computing by : Laurence T. Yang

Download or read book High-Performance Computing written by Laurence T. Yang and published by John Wiley & Sons. This book was released on 2005-11-18 with total page 818 pages. Available in PDF, EPUB and Kindle. Book excerpt: The state of the art of high-performance computing Prominent researchers from around the world have gathered to present the state-of-the-art techniques and innovations in high-performance computing (HPC), including: * Programming models for parallel computing: graph-oriented programming (GOP), OpenMP, the stages and transformation (SAT) approach, the bulk-synchronous parallel (BSP) model, Message Passing Interface (MPI), and Cilk * Architectural and system support, featuring the code tiling compiler technique, the MigThread application-level migration and checkpointing package, the new prefetching scheme of atomicity, a new "receiver makes right" data conversion method, and lessons learned from applying reconfigurable computing to HPC * Scheduling and resource management issues with heterogeneous systems, bus saturation effects on SMPs, genetic algorithms for distributed computing, and novel task-scheduling algorithms * Clusters and grid computing: design requirements, grid middleware, distributed virtual machines, data grid services and performance-boosting techniques, security issues, and open issues * Peer-to-peer computing (P2P) including the proposed search mechanism of hybrid periodical flooding (HPF) and routing protocols for improved routing performance * Wireless and mobile computing, featuring discussions of implementing the Gateway Location Register (GLR) concept in 3G cellular networks, maximizing network longevity, and comparisons of QoS-aware scatternet scheduling algorithms * High-performance applications including partitioners, running Bag-of-Tasks applications on grids, using low-cost clusters to meet high-demand applications, and advanced convergent architectures and protocols High-Performance Computing: Paradigm and Infrastructure is an invaluable compendium for engineers, IT professionals, and researchers and students of computer science and applied mathematics.

High Performance Computing

Author : Thomas Sterling
Publisher : Morgan Kaufmann
ISBN 13 : 0124202152
Total Pages : 718 pages
Book Rating : 4.1/5 (242 download)

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Book Synopsis High Performance Computing by : Thomas Sterling

Download or read book High Performance Computing written by Thomas Sterling and published by Morgan Kaufmann. This book was released on 2017-12-05 with total page 718 pages. Available in PDF, EPUB and Kindle. Book excerpt: High Performance Computing: Modern Systems and Practices is a fully comprehensive and easily accessible treatment of high performance computing, covering fundamental concepts and essential knowledge while also providing key skills training. With this book, domain scientists will learn how to use supercomputers as a key tool in their quest for new knowledge. In addition, practicing engineers will discover how supercomputers can employ HPC systems and methods to the design and simulation of innovative products, and students will begin their careers with an understanding of possible directions for future research and development in HPC. Those who maintain and administer commodity clusters will find this textbook provides essential coverage of not only what HPC systems do, but how they are used. Covers enabling technologies, system architectures and operating systems, parallel programming languages and algorithms, scientific visualization, correctness and performance debugging tools and methods, GPU accelerators and big data problems Provides numerous examples that explore the basics of supercomputing, while also providing practical training in the real use of high-end computers Helps users with informative and practical examples that build knowledge and skills through incremental steps Features sidebars of background and context to present a live history and culture of this unique field Includes online resources, such as recorded lectures from the authors’ HPC courses

High Performance Computing

Author : Kevin Dowd
Publisher : O'Reilly Media
ISBN 13 :
Total Pages : 482 pages
Book Rating : 4.:/5 (318 download)

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Book Synopsis High Performance Computing by : Kevin Dowd

Download or read book High Performance Computing written by Kevin Dowd and published by O'Reilly Media. This book was released on 1998 with total page 482 pages. Available in PDF, EPUB and Kindle. Book excerpt: This second edition gives a thorough overview of the latest workstation and PC architectures and the trends that will influence the next generation. It pays special attention to memory design, tuning code for the best performance, multiprocessors, and benchmarking.