Genetics and Genomics of the Brassicaceae

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Publisher : Springer Science & Business Media
ISBN 13 : 1441971181
Total Pages : 675 pages
Book Rating : 4.4/5 (419 download)

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Book Synopsis Genetics and Genomics of the Brassicaceae by : Renate Schmidt

Download or read book Genetics and Genomics of the Brassicaceae written by Renate Schmidt and published by Springer Science & Business Media. This book was released on 2010-12-03 with total page 675 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Genetics and Genomics of the Brassicaceae provides a review of this important family (commonly termed the mustard family, or Cruciferae). The family contains several cultivated species, including radish, rocket, watercress, wasabi and horseradish, in addition to the vegetable and oil crops of the Brassica genus. There are numerous further species with great potential for exploitation in 21st century agriculture, particularly as sources of bioactive chemicals. These opportunities are reviewed, in the context of the Brassicaceae in agriculture. More detailed descriptions are provided of the genetics of the cultivated Brassica crops, including both the species producing most of the brassica vegetable crops (B. rapa and B. oleracea) and the principal species producing oilseed crops (B. napus and B. juncea). The Brassicaceae also include important “model” plant species. Most prominent is Arabidopsis thaliana, the first plant species to have its genome sequenced. Natural genetic variation is reviewed for A. thaliana, as are the genetics of the closely related A. lyrata and of the genus Capsella. Self incompatibility is widespread in the Brassicaceae, and this subject is reviewed. Interest arising from both the commercial value of crop species of the Brassicaceae and the importance of Arabidopsis thaliana as a model species, has led to the development of numerous resources to support research. These are reviewed, including germplasm and genomic library resources, and resources for reverse genetics, metabolomics, bioinformatics and transformation. Molecular studies of the genomes of species of the Brassicaceae revealed extensive genome duplication, indicative of multiple polyploidy events during evolution. In some species, such as Brassica napus, there is evidence of multiple rounds of polyploidy during its relatively recent evolution, thus the Brassicaceae represent an excellent model system for the study of the impacts of polyploidy and the subsequent process of diploidisation, whereby the genome stabilises. Sequence-level characterization of the genomes of Arabidopsis thaliana and Brassica rapa are presented, along with summaries of comparative studies conducted at both linkage map and sequence level, and analysis of the structural and functional evolution of resynthesised polyploids, along with a description of the phylogeny and karyotype evolution of the Brassicaceae. Finally, some perspectives of the editors are presented. These focus upon the Brassicaceae species as models for studying genome evolution following polyploidy, the impact of advances in genome sequencing technology, prospects for future transcriptome analysis and upcoming model systems.

Gene Prediction

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Publisher : Humana Press
ISBN 13 : 9781493991723
Total Pages : 284 pages
Book Rating : 4.9/5 (917 download)

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Book Synopsis Gene Prediction by : Martin Kollmar

Download or read book Gene Prediction written by Martin Kollmar and published by Humana Press. This book was released on 2019-05-19 with total page 284 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume introduces software used for gene prediction with focus on eukaryotic genomes. The chapters in this book describe software and web server usage as applied in common use-cases, and explain ways to simplify re-annotation of long available genome assemblies. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary computational requirements, step-by-step, readily reproducible computational protocols, and tips on troubleshooting and avoiding known pitfalls. Cutting-edge and thorough, Gene Prediction: Methods and Protocols is a valuable resource for researchers and research groups working on the assembly and annotation of single species or small groups of species. Chapter 3 is available open access under a CC BY 4.0 license via link.springer.com.

Sustainable strategies for managing Brassica napus (oilseed rape) resistance to Leptosphaeria maculans (phoma stem canker)

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Publisher : Springer Science & Business Media
ISBN 13 : 9781402045240
Total Pages : 140 pages
Book Rating : 4.0/5 (452 download)

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Book Synopsis Sustainable strategies for managing Brassica napus (oilseed rape) resistance to Leptosphaeria maculans (phoma stem canker) by : B.D.L. Fitt

Download or read book Sustainable strategies for managing Brassica napus (oilseed rape) resistance to Leptosphaeria maculans (phoma stem canker) written by B.D.L. Fitt and published by Springer Science & Business Media. This book was released on 2006-01-24 with total page 140 pages. Available in PDF, EPUB and Kindle. Book excerpt: Control of phoma stem canker in oil rapeseed crops typically depends on cultivars resistant to L. Maculans, the virus that causes it. Recently, virus populations have overcome resistance, causing serious canker outbreaks in Australia and Europe. There is an urgent need to find sources of resistance to L. maculans. This book synthesizes studies in management of resistance genes control L. maculans, and will stimulate further research on this important model system.

The Maize Genome

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Publisher : Springer
ISBN 13 : 3319974270
Total Pages : 390 pages
Book Rating : 4.3/5 (199 download)

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Book Synopsis The Maize Genome by : Jeffrey Bennetzen

Download or read book The Maize Genome written by Jeffrey Bennetzen and published by Springer. This book was released on 2018-11-24 with total page 390 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book discusses advances in our understanding of the structure and function of the maize genome since publication of the original B73 reference genome in 2009, and the progress in translating this knowledge into basic biology and trait improvement. Maize is an extremely important crop, providing a large proportion of the world’s human caloric intake and animal feed, and serving as a model species for basic and applied research. The exceptionally high level of genetic diversity within maize presents opportunities and challenges in all aspects of maize genetics, from sequencing and genotyping to linking genotypes to phenotypes. Topics covered in this timely book range from (i) genome sequencing and genotyping techniques, (ii) genome features such as centromeres and epigenetic regulation, (iii) tools and resources available for trait genomics, to (iv) applications of allele mining and genomics-assisted breeding. This book is a valuable resource for researchers and students interested in maize genetics and genomics.

The Brassica napus Genome

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Publisher : Springer
ISBN 13 : 3319436945
Total Pages : 295 pages
Book Rating : 4.3/5 (194 download)

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Book Synopsis The Brassica napus Genome by : Shengyi Liu

Download or read book The Brassica napus Genome written by Shengyi Liu and published by Springer. This book was released on 2018-10-22 with total page 295 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes how the genome sequence contributes to our understanding of allopolyploidisation and the genome evolution, genetic diversity, complex trait regulation and knowledge-based breeding of this important crop. Numerous examples demonstrate how widespread homoeologous genome rearrangements and exchanges have moulded structural genome diversity following a severe polyploidy bottleneck. The allopolyploid crop species Brassica napus has the most highly duplicated plant genome to be assembled to date, with the largest number of annotated genes. Examples are provided for use of the genome sequence to identify and capture diversity for important agronomic traits, including seed quality and disease resistance. The increased potential for detailed gene discovery using high-density genetic mapping, quantitative genetics and transcriptomic analyses is described in the context of genome availability and illustrated with recent examples. Intimate knowledge of the highly-duplicated gene space, on the one hand, and the repeat landscape on the other, particularly in comparison to the two diploid progenitor genomes, provide a fundamental basis for new insights into the regulatory mechanisms that are coupled with selection for polyploid success and crop evolution.

Biology of Brassica Coenospecies

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Publisher : Elsevier
ISBN 13 : 0080528023
Total Pages : 501 pages
Book Rating : 4.0/5 (85 download)

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Book Synopsis Biology of Brassica Coenospecies by : C. Gomez-Campo

Download or read book Biology of Brassica Coenospecies written by C. Gomez-Campo and published by Elsevier. This book was released on 1999-07-07 with total page 501 pages. Available in PDF, EPUB and Kindle. Book excerpt: Brassica crop species and their allies (Raphanus, Sinapis, Eruca, etc.) are important sources of edible roots, stems, leaves, buds and inflorescences, as well as of edible or industrial oils, condiments and forage. Many well known names of plants or plant products, such as kale, cabbage, brocolli, cauliflower, Brussels sprouts, kohl-rabi, Chinese cabbage, turnip, rape, rutabaga, swede, colza or rapeseed, canola, mustard, rocket, etc. are directly associated to this botanical group.The scientific interest for this botanical group has run parallel to its economical importance, and research achievements in our days would have certainly appeared unimaginable only two decades ago. As the end of the millenium approaches, entirely new fields (transformation, somatic fusion, etc.) have been added to the classical ones. Thus, nobody can doubt the opportuneness of this book, which combines and presents both the basic and applied biological aspects of the Brassica species.

Genetical Analysis of Quantitative Traits

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Publisher : Garland Science
ISBN 13 : 1000144178
Total Pages : 396 pages
Book Rating : 4.0/5 (1 download)

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Book Synopsis Genetical Analysis of Quantitative Traits by : Dr M Kearsey

Download or read book Genetical Analysis of Quantitative Traits written by Dr M Kearsey and published by Garland Science. This book was released on 2020-10-29 with total page 396 pages. Available in PDF, EPUB and Kindle. Book excerpt: This text provides a guide to the experimental and analytical methodologies available to study quantitative traits, a review of the genetic control of quantitative traits, and a discussion of how this knowledge can be applied to breeding problems and evolution.

Brassica Improvement

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Publisher : Springer Nature
ISBN 13 : 3030346943
Total Pages : 261 pages
Book Rating : 4.0/5 (33 download)

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Book Synopsis Brassica Improvement by : Shabir Hussain Wani

Download or read book Brassica Improvement written by Shabir Hussain Wani and published by Springer Nature. This book was released on 2020-03-13 with total page 261 pages. Available in PDF, EPUB and Kindle. Book excerpt: Global population is mounting at an alarming stride to surpass 9.3 billion by 2050, whereas simultaneously the agricultural productivity is gravely affected by climate changes resulting in increased biotic and abiotic stresses. The genus Brassica belongs to the mustard family whose members are known as cruciferous vegetables, cabbages or mustard plants. Rapeseed-mustard is world’s third most important source of edible oil after soybean and oil palm. It has worldwide acceptance owing to its rare combination of health promoting factors. It has very low levels of saturated fatty acids which make it the healthiest edible oil that is commonly available. Apart from this, it is rich in antioxidants by virtue of tocopherols and phytosterols presence in the oil. The high omega 3 content reduces the risk of atherosclerosis/heart attack. Conventional breeding methods have met with limited success in Brassica because yield and stress resilience are polygenic traits and are greatly influenced by environment. Therefore, it is imperative to accelerate the efforts to unravel the biochemical, physiological and molecular mechanisms underlying yield, quality and tolerance towards biotic and abiotic stresses in Brassica. To exploit its fullest potential, systematic efforts are needed to unlock the genetic information for new germplasms that tolerate initial and terminal state heat coupled with moisture stress. For instance, wild relatives may be exploited in developing introgressed and resynthesized lines with desirable attributes. Exploitation of heterosis is another important area which can be achieved by introducing transgenics to raise stable CMS lines. Doubled haploid breeding and marker assisted selection should be employed along with conventional breeding. Breeding programmes aim at enhancing resource use efficiency, especially nutrient and water as well as adoption to aberrant environmental changes should also be considered. Biotechnological interventions are essential for altering the biosynthetic pathways for developing high oleic and low linolenic lines. Accordingly, tools such as microspore and ovule culture, embryo rescue, isolation of trait specific genes especially for aphid, Sclerotinia and alternaria blight resistance, etc. along with identification of potential lines based on genetic diversity can assist ongoing breeding programmes. In this book, we highlight the recent molecular, genetic and genomic interventions made to achieve crop improvement in terms of yield increase, quality and stress tolerance in Brassica, with a special emphasis in Rapeseed-mustard.

Incompatibility and Incongruity in Wild and Cultivated Plants

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Publisher : Springer Science & Business Media
ISBN 13 : 3662045028
Total Pages : 347 pages
Book Rating : 4.6/5 (62 download)

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Book Synopsis Incompatibility and Incongruity in Wild and Cultivated Plants by : Dreux de Nettancourt

Download or read book Incompatibility and Incongruity in Wild and Cultivated Plants written by Dreux de Nettancourt and published by Springer Science & Business Media. This book was released on 2013-03-14 with total page 347 pages. Available in PDF, EPUB and Kindle. Book excerpt: Advances in plant cell molecular biology have considerably increased our understanding of pollen-pistil barriers, particularly those operated by incompatibility mechanisms, and, at the same time, demonstrated the complexity and diversity of rejection systems once considered to be relatively simple. This book reviews the impressive knowledge acquired in the last century on the biology, particularly the inheritance and population genetics of self-incompatibility, and presents the new approaches to the study of the structure, function and evolution of incompatibility alleles and the analysis of cell-cell recognition and pollen rejection. The different methods now available for transforming the breeding behaviour of higher plants are also discussed.

Paleogenomics

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Publisher : Springer
ISBN 13 : 3030047539
Total Pages : 432 pages
Book Rating : 4.0/5 (3 download)

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Book Synopsis Paleogenomics by : Charlotte Lindqvist

Download or read book Paleogenomics written by Charlotte Lindqvist and published by Springer. This book was released on 2019-01-07 with total page 432 pages. Available in PDF, EPUB and Kindle. Book excerpt: Advances in genome-scale DNA sequencing technologies have revolutionized genetic research on ancient organisms, extinct species, and past environments. When it is recoverable after hundreds or thousands of years of unintended preservation, “ancient DNA” (or aDNA) is often highly degraded, necessitating specialized handling and analytical approaches. Paleogenomics defines the field of reconstructing and analyzing the genomes of historic or long-dead organisms, most often through comparison with modern representatives of the same or similar species. The opportunity to isolate and study paleogenomes has radically transformed many fields, spanning biology, anthropology, agriculture, and medicine. Examples include understanding evolutionary relationships of extinct species known only from fossils, the domestication of plants and animals, and the evolution and geographical spread of certain pathogens. This pioneering book presents a snapshot view of the history, current status, and future prospects of paleogenomics, taking a broad viewpoint that covers a range of topics and organisms to provide an up-to-date status of the applications, challenges, and promise of the field. This book is intended for a variety of readerships, including upper-level undergraduate and graduate students, professionals and experts in the field, as well as anyone excited by the extraordinary insights that paleogenomics offers.

Brassica Crops and Wild Allies

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Publisher :
ISBN 13 :
Total Pages : 380 pages
Book Rating : 4.3/5 (91 download)

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Book Synopsis Brassica Crops and Wild Allies by : Shigesaburō Tsunoda

Download or read book Brassica Crops and Wild Allies written by Shigesaburō Tsunoda and published by . This book was released on 1980 with total page 380 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Plant Breeding from Laboratories to Fields

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Publisher : BoD – Books on Demand
ISBN 13 : 953511090X
Total Pages : 302 pages
Book Rating : 4.5/5 (351 download)

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Book Synopsis Plant Breeding from Laboratories to Fields by : Sven Bode Andersen

Download or read book Plant Breeding from Laboratories to Fields written by Sven Bode Andersen and published by BoD – Books on Demand. This book was released on 2013-05-22 with total page 302 pages. Available in PDF, EPUB and Kindle. Book excerpt: Breeding of crop plants to make them more adapted to human agricultural systems has been on-going during domestication the last 10 000 years. However, only recently with the invention of the Mendelian principles of genetics and the subsequent development of quantitative genetics during the twentieth century has such genetic crop improvement become based on a general theory. During the last 50 years plant breeding has entered a molecular era based on molecular tools to analyse DNA, RNA and proteins and associate such molecular results with plant phenotype. These marker trait associations develop fast to enable more efficient breeding. However, they still leave a major part of breeding to be performed through selection of phenotypes using quantitative genetic tools. The ten chapters of this book illustrate this development.

Molecular Plant Abiotic Stress

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Publisher : John Wiley & Sons
ISBN 13 : 111946367X
Total Pages : 649 pages
Book Rating : 4.1/5 (194 download)

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Book Synopsis Molecular Plant Abiotic Stress by : Aryadeep Roychoudhury

Download or read book Molecular Plant Abiotic Stress written by Aryadeep Roychoudhury and published by John Wiley & Sons. This book was released on 2019-06-13 with total page 649 pages. Available in PDF, EPUB and Kindle. Book excerpt: A close examination of current research on abiotic stresses in various plant species The unpredictable environmental stress conditions associated with climate change are significant challenges to global food security, crop productivity, and agricultural sustainability. Rapid population growth and diminishing resources necessitate the development of crops that can adapt to environmental extremities. Although significant advancements have been made in developing plants through improved crop breeding practices and genetic manipulation, further research is necessary to understand how genes and metabolites for stress tolerance are modulated, and how cross-talk and regulators can be tuned to achieve stress tolerance. Molecular Plant Abiotic Stress: Biology and Biotechnology is an extensive investigation of the various forms of abiotic stresses encountered in plants, and susceptibility or tolerance mechanisms found in different plant species. In-depth examination of morphological, anatomical, biochemical, molecular and gene expression levels enables plant scientists to identify the different pathways and signaling cascades involved in stress response. This timely book: Covers a wide range of abiotic stresses in multiple plant species Provides researchers and scientists with transgenic strategies to overcome stress tolerances in several plant species Compiles the most recent research and up-to-date data on stress tolerance Examines both selective breeding and genetic engineering approaches to improving plant stress tolerances Written and edited by prominent scientists and researchers from across the globe Molecular Plant Abiotic Stress: Biology and Biotechnology is a valuable source of information for students, academics, scientists, researchers, and industry professionals in fields including agriculture, botany, molecular biology, biochemistry and biotechnology, and plant physiology.

Plant Genomes

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Publisher : Karger Medical and Scientific Publishers
ISBN 13 : 3805584911
Total Pages : 155 pages
Book Rating : 4.8/5 (55 download)

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Book Synopsis Plant Genomes by : Jean-Nicolas Volff

Download or read book Plant Genomes written by Jean-Nicolas Volff and published by Karger Medical and Scientific Publishers. This book was released on 2008-01-01 with total page 155 pages. Available in PDF, EPUB and Kindle. Book excerpt: Recent major advances in the field of comparative genomics and cytogenomics of plants, particularly associated with the completion of ambitious genome projects, have uncovered astonishing facets of the architecture and evolutionary history of plant genomes. The aim of this book was to review these recent developments as well as their implications in our understanding of the mechanisms which drive plant diversity. New insights into the evolution of gene functions, gene families and genome size are presented, with particular emphasis on the evolutionary impact of polyploidization and transposable elements. Knowledge on the structure and evolution of plant sex chromosomes, centromeres and microRNAs is reviewed and updated. Taken together, the contributions by internationally recognized experts present a panoramic overview of the structural features and evolutionary dynamics of plant genomes.This volume of Genome Dynamics will provide researchers, teachers and students in the fields of biology and agronomy with a valuable source of current knowledge on plant genomes.

Principles of Plant Breeding

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Publisher : John Wiley & Sons
ISBN 13 : 9780471023098
Total Pages : 274 pages
Book Rating : 4.0/5 (23 download)

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Book Synopsis Principles of Plant Breeding by : Robert W. Allard

Download or read book Principles of Plant Breeding written by Robert W. Allard and published by John Wiley & Sons. This book was released on 1999-05-10 with total page 274 pages. Available in PDF, EPUB and Kindle. Book excerpt: Die Pflanzenzucht enthält Elemente individueller und kultureller Selektion - ein Prozeß, den die langerwartete zweite Auflage hinsichtlich sowohl einzelner Pflanzen als auch kompletter Populationen unter die Lupe nimmt. Im Zuge der Aktualisierung des Stoffes wurden neue Themen aufgenommen: moderne Gewebekulturtechniken, molekularbiologische Verfahren, Aspekte der Wechselwirkung zwischen natürlicher und menschlicher Selektion und zwischen Genotyp und Umwelt sowie eine Reihe von Techniken zur Ertragssteigerung in ungünstigen Anbaugebieten. (05/99)

Breeding Oilseed Brassicas

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Publisher : Springer
ISBN 13 : 9783662061671
Total Pages : 253 pages
Book Rating : 4.0/5 (616 download)

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Book Synopsis Breeding Oilseed Brassicas by : Kuldeep S. Labana

Download or read book Breeding Oilseed Brassicas written by Kuldeep S. Labana and published by Springer. This book was released on 2014-03-12 with total page 253 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Advances in Wheat Genetics: From Genome to Field

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Publisher : Springer
ISBN 13 : 4431556753
Total Pages : 421 pages
Book Rating : 4.4/5 (315 download)

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Book Synopsis Advances in Wheat Genetics: From Genome to Field by : Yasunari Ogihara

Download or read book Advances in Wheat Genetics: From Genome to Field written by Yasunari Ogihara and published by Springer. This book was released on 2015-09-15 with total page 421 pages. Available in PDF, EPUB and Kindle. Book excerpt: This proceedings is a collection of 46 selected papers that were presented at the 12th International Wheat Genetics Symposium (IWGS). Since the launch of the wheat genome sequencing project in 2005, the arrival of draft genome sequences has marked a new era in wheat genetics and genomics, catalyzing rapid advancement in the field. This book provides a comprehensive review of the forefront of wheat research, across various important topics such as germplasm and genetic diversity, cytogenetics and allopolyploid evolution, genome sequencing, structural and functional genomics, gene function and molecular biology, biotic stress, abiotic stress, grain quality, and classical and molecular breeding. Following an introduction, 9 parts of the book are dedicated to each of these topics. A final, 11th part entitled “Toward Sustainable Wheat Production” contains 7 excellent papers that were presented in the 12th IWGS Special Session supported by the OECD. With rapid population growth and radical climate changes, the world faces a global food crisis and is in need of another Green Revolution to boost yields of wheat and other widely grown staple crops. Although this book focuses on wheat, many of the newly developed techniques and results presented here can be applied to other plant species with large and complex genomes. As such, this volume is highly recommended for all students and researchers in wheat sciences and related plant sciences and for those who are interested in stable food production and food security.