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Bayesian Data Analysis For The Behavioral And Neural Sciences
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Book Synopsis Bayesian Data Analysis for the Behavioral and Neural Sciences by : Todd E. Hudson
Download or read book Bayesian Data Analysis for the Behavioral and Neural Sciences written by Todd E. Hudson and published by Cambridge University Press. This book was released on 2021-06-24 with total page 615 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bayesian analyses go beyond frequentist techniques of p-values and null hypothesis tests, providing a modern understanding of data analysis.
Book Synopsis Bayesian Data Analysis for the Behavioral and Neural Sciences by : Todd E. Hudson
Download or read book Bayesian Data Analysis for the Behavioral and Neural Sciences written by Todd E. Hudson and published by Cambridge University Press. This book was released on 2021-06-24 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: This textbook bypasses the need for advanced mathematics by providing in-text computer code, allowing students to explore Bayesian data analysis without the calculus background normally considered a prerequisite for this material. Now, students can use the best methods without needing advanced mathematical techniques. This approach goes beyond “frequentist” concepts of p-values and null hypothesis testing, using the full power of modern probability theory to solve real-world problems. The book offers a fully self-contained course, which demonstrates analysis techniques throughout with worked examples crafted specifically for students in the behavioral and neural sciences. The book presents two general algorithms that help students solve the measurement and model selection (also called “hypothesis testing”) problems most frequently encountered in real-world applications.
Download or read book Bayesian Methods written by Jeff Gill and published by CRC Press. This book was released on 2014-12-11 with total page 689 pages. Available in PDF, EPUB and Kindle. Book excerpt: An Update of the Most Popular Graduate-Level Introductions to Bayesian Statistics for Social ScientistsNow that Bayesian modeling has become standard, MCMC is well understood and trusted, and computing power continues to increase, Bayesian Methods: A Social and Behavioral Sciences Approach, Third Edition focuses more on implementation details of th
Download or read book Bayesian Methods written by Jeff Gill and published by CRC Press. This book was released on 2007-11-26 with total page 696 pages. Available in PDF, EPUB and Kindle. Book excerpt: The first edition of Bayesian Methods: A Social and Behavioral Sciences Approach helped pave the way for Bayesian approaches to become more prominent in social science methodology. While the focus remains on practical modeling and basic theory as well as on intuitive explanations and derivations without skipping steps, this second edition incorporates the latest methodology and recent changes in software offerings. New to the Second Edition Two chapters on Markov chain Monte Carlo (MCMC) that cover ergodicity, convergence, mixing, simulated annealing, reversible jump MCMC, and coupling Expanded coverage of Bayesian linear and hierarchical models More technical and philosophical details on prior distributions A dedicated R package (BaM) with data and code for the examples as well as a set of functions for practical purposes such as calculating highest posterior density (HPD) intervals Requiring only a basic working knowledge of linear algebra and calculus, this text is one of the few to offer a graduate-level introduction to Bayesian statistics for social scientists. It first introduces Bayesian statistics and inference, before moving on to assess model quality and fit. Subsequent chapters examine hierarchical models within a Bayesian context and explore MCMC techniques and other numerical methods. Concentrating on practical computing issues, the author includes specific details for Bayesian model building and testing and uses the R and BUGS software for examples and exercises.
Book Synopsis Joint Models of Neural and Behavioral Data by : Brandon M. Turner
Download or read book Joint Models of Neural and Behavioral Data written by Brandon M. Turner and published by Springer. This book was released on 2019-01-04 with total page 109 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents a flexible Bayesian framework for combining neural and cognitive models. Traditionally, studies in cognition and cognitive sciences have been done by either observing behavior (e.g., response times, percentage correct, etc.) or by observing neural activity (e.g., the BOLD response). These two types of observations have traditionally supported two separate lines of study, which are led by two different cognitive modelers. Joining neuroimaging and computational modeling in a single hierarchical framework allows the neural data to influence the parameters of the cognitive model and allows behavioral data to constrain the neural model. This Bayesian approach can be used to reveal interactions between behavioral and neural parameters, and ultimately, between neural activity and cognitive mechanisms. Chapters demonstrate the utility of this Bayesian model with a variety of applications, and feature a tutorial chapter where the methods can be applied to an example problem. The book also discusses other joint modeling approaches and future directions. Joint Models of Neural and Behavioral Data will be of interest to advanced graduate students and postdoctoral candidates in an academic setting as well as researchers in the fields of cognitive psychology and neuroscience.
Book Synopsis Doing Bayesian Data Analysis by : John Kruschke
Download or read book Doing Bayesian Data Analysis written by John Kruschke and published by Academic Press. This book was released on 2014-11-11 with total page 776 pages. Available in PDF, EPUB and Kindle. Book excerpt: Doing Bayesian Data Analysis: A Tutorial with R, JAGS, and Stan, Second Edition provides an accessible approach for conducting Bayesian data analysis, as material is explained clearly with concrete examples. Included are step-by-step instructions on how to carry out Bayesian data analyses in the popular and free software R and WinBugs, as well as new programs in JAGS and Stan. The new programs are designed to be much easier to use than the scripts in the first edition. In particular, there are now compact high-level scripts that make it easy to run the programs on your own data sets. The book is divided into three parts and begins with the basics: models, probability, Bayes’ rule, and the R programming language. The discussion then moves to the fundamentals applied to inferring a binomial probability, before concluding with chapters on the generalized linear model. Topics include metric-predicted variable on one or two groups; metric-predicted variable with one metric predictor; metric-predicted variable with multiple metric predictors; metric-predicted variable with one nominal predictor; and metric-predicted variable with multiple nominal predictors. The exercises found in the text have explicit purposes and guidelines for accomplishment. This book is intended for first-year graduate students or advanced undergraduates in statistics, data analysis, psychology, cognitive science, social sciences, clinical sciences, and consumer sciences in business. Accessible, including the basics of essential concepts of probability and random sampling Examples with R programming language and JAGS software Comprehensive coverage of all scenarios addressed by non-Bayesian textbooks: t-tests, analysis of variance (ANOVA) and comparisons in ANOVA, multiple regression, and chi-square (contingency table analysis) Coverage of experiment planning R and JAGS computer programming code on website Exercises have explicit purposes and guidelines for accomplishment Provides step-by-step instructions on how to conduct Bayesian data analyses in the popular and free software R and WinBugs
Book Synopsis Analysis of Neural Data by : Robert E. Kass
Download or read book Analysis of Neural Data written by Robert E. Kass and published by Springer. This book was released on 2014-07-08 with total page 663 pages. Available in PDF, EPUB and Kindle. Book excerpt: Continual improvements in data collection and processing have had a huge impact on brain research, producing data sets that are often large and complicated. By emphasizing a few fundamental principles, and a handful of ubiquitous techniques, Analysis of Neural Data provides a unified treatment of analytical methods that have become essential for contemporary researchers. Throughout the book ideas are illustrated with more than 100 examples drawn from the literature, ranging from electrophysiology, to neuroimaging, to behavior. By demonstrating the commonality among various statistical approaches the authors provide the crucial tools for gaining knowledge from diverse types of data. Aimed at experimentalists with only high-school level mathematics, as well as computationally-oriented neuroscientists who have limited familiarity with statistics, Analysis of Neural Data serves as both a self-contained introduction and a reference work.
Book Synopsis A Handbook for Data Analysis in the Behaviorial Sciences by : Gideon Keren
Download or read book A Handbook for Data Analysis in the Behaviorial Sciences written by Gideon Keren and published by Psychology Press. This book was released on 2014-01-14 with total page 587 pages. Available in PDF, EPUB and Kindle. Book excerpt: Statistical methodology is often conceived by social scientists in a technical manner; they use it for support rather than for illumination. This two-volume set attempts to provide some partial remedy to the problems that have led to this state of affairs. Both traditional issues, such as analysis of variance and the general linear model, as well as more novel methods like exploratory data analysis, are included. The editors aim to provide an updated survey on different aspects of empirical research and data analysis, facilitate the understanding of the internal logic underlying different methods, and provide novel and broader perspectives beyond what is usually covered in traditional curricula.
Book Synopsis Advanced State Space Methods for Neural and Clinical Data by : Zhe Chen
Download or read book Advanced State Space Methods for Neural and Clinical Data written by Zhe Chen and published by Cambridge University Press. This book was released on 2015-10-15 with total page 397 pages. Available in PDF, EPUB and Kindle. Book excerpt: An authoritative and in-depth treatment of state space methods, with a range of applications in neural and clinical data.
Book Synopsis Doing Bayesian Data Analysis by : John Kruschke
Download or read book Doing Bayesian Data Analysis written by John Kruschke and published by Academic Press. This book was released on 2010-11-25 with total page 673 pages. Available in PDF, EPUB and Kindle. Book excerpt: There is an explosion of interest in Bayesian statistics, primarily because recently created computational methods have finally made Bayesian analysis tractable and accessible to a wide audience. Doing Bayesian Data Analysis, A Tutorial Introduction with R and BUGS, is for first year graduate students or advanced undergraduates and provides an accessible approach, as all mathematics is explained intuitively and with concrete examples. It assumes only algebra and ‘rusty’ calculus. Unlike other textbooks, this book begins with the basics, including essential concepts of probability and random sampling. The book gradually climbs all the way to advanced hierarchical modeling methods for realistic data. The text provides complete examples with the R programming language and BUGS software (both freeware), and begins with basic programming examples, working up gradually to complete programs for complex analyses and presentation graphics. These templates can be easily adapted for a large variety of students and their own research needs.The textbook bridges the students from their undergraduate training into modern Bayesian methods. Accessible, including the basics of essential concepts of probability and random sampling Examples with R programming language and BUGS software Comprehensive coverage of all scenarios addressed by non-bayesian textbooks- t-tests, analysis of variance (ANOVA) and comparisons in ANOVA, multiple regression, and chi-square (contingency table analysis). Coverage of experiment planning R and BUGS computer programming code on website Exercises have explicit purposes and guidelines for accomplishment
Book Synopsis Advanced Data Analysis in Neuroscience by : Daniel Durstewitz
Download or read book Advanced Data Analysis in Neuroscience written by Daniel Durstewitz and published by Springer. This book was released on 2017-09-15 with total page 292 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is intended for use in advanced graduate courses in statistics / machine learning, as well as for all experimental neuroscientists seeking to understand statistical methods at a deeper level, and theoretical neuroscientists with a limited background in statistics. It reviews almost all areas of applied statistics, from basic statistical estimation and test theory, linear and nonlinear approaches for regression and classification, to model selection and methods for dimensionality reduction, density estimation and unsupervised clustering. Its focus, however, is linear and nonlinear time series analysis from a dynamical systems perspective, based on which it aims to convey an understanding also of the dynamical mechanisms that could have generated observed time series. Further, it integrates computational modeling of behavioral and neural dynamics with statistical estimation and hypothesis testing. This way computational models in neuroscience are not only explanatory frameworks, but become powerful, quantitative data-analytical tools in themselves that enable researchers to look beyond the data surface and unravel underlying mechanisms. Interactive examples of most methods are provided through a package of MatLab routines, encouraging a playful approach to the subject, and providing readers with a better feel for the practical aspects of the methods covered. "Computational neuroscience is essential for integrating and providing a basis for understanding the myriads of remarkable laboratory data on nervous system functions. Daniel Durstewitz has excellently covered the breadth of computational neuroscience from statistical interpretations of data to biophysically based modeling of the neurobiological sources of those data. His presentation is clear, pedagogically sound, and readily useable by experts and beginners alike. It is a pleasure to recommend this very well crafted discussion to experimental neuroscientists as well as mathematically well versed Physicists. The book acts as a window to the issues, to the questions, and to the tools for finding the answers to interesting inquiries about brains and how they function." Henry D. I. Abarbanel Physics and Scripps Institution of Oceanography, University of California, San Diego “This book delivers a clear and thorough introduction to sophisticated analysis approaches useful in computational neuroscience. The models described and the examples provided will help readers develop critical intuitions into what the methods reveal about data. The overall approach of the book reflects the extensive experience Prof. Durstewitz has developed as a leading practitioner of computational neuroscience. “ Bruno B. Averbeck
Book Synopsis Bayesian Data Analysis by : Andrew Gelman
Download or read book Bayesian Data Analysis written by Andrew Gelman and published by CRC Press. This book was released on 2013-11-27 with total page 663 pages. Available in PDF, EPUB and Kindle. Book excerpt: Winner of the 2016 De Groot Prize from the International Society for Bayesian AnalysisNow in its third edition, this classic book is widely considered the leading text on Bayesian methods, lauded for its accessible, practical approach to analyzing data and solving research problems. Bayesian Data Analysis, Third Edition continues to take an applied
Book Synopsis Stevens' Handbook of Experimental Psychology and Cognitive Neuroscience, Methodology by :
Download or read book Stevens' Handbook of Experimental Psychology and Cognitive Neuroscience, Methodology written by and published by John Wiley & Sons. This book was released on 2018-02-12 with total page 848 pages. Available in PDF, EPUB and Kindle. Book excerpt: V. Methodology: E. J. Wagenmakers (Volume Editor) Topics covered include methods and models in categorization; cultural consensus theory; network models for clinical psychology; response time modeling; analyzing neural time series data; models and methods for reinforcement learning; convergent methods of memory research; theories for discriminating signal from noise; bayesian cognitive modeling; mathematical modeling in cognition and cognitive neuroscience; the stop-signal paradigm; hypothesis testing and statistical inference; model comparison in psychology; fmri; neural recordings; open science; neural networks and neurocomputational modeling; serial versus parallel processing; methods in psychophysics.
Book Synopsis Stevens' Handbook of Experimental Psychology and Cognitive Neuroscience, Methodology by :
Download or read book Stevens' Handbook of Experimental Psychology and Cognitive Neuroscience, Methodology written by and published by John Wiley & Sons. This book was released on 2018-02-12 with total page 848 pages. Available in PDF, EPUB and Kindle. Book excerpt: V. Methodology: E. J. Wagenmakers (Volume Editor) Topics covered include methods and models in categorization; cultural consensus theory; network models for clinical psychology; response time modeling; analyzing neural time series data; models and methods for reinforcement learning; convergent methods of memory research; theories for discriminating signal from noise; bayesian cognitive modeling; mathematical modeling in cognition and cognitive neuroscience; the stop-signal paradigm; hypothesis testing and statistical inference; model comparison in psychology; fmri; neural recordings; open science; neural networks and neurocomputational modeling; serial versus parallel processing; methods in psychophysics.
Book Synopsis Expected Experiences by : Tony Cheng
Download or read book Expected Experiences written by Tony Cheng and published by Taylor & Francis. This book was released on 2023-12-29 with total page 314 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book brings together perspectives on predictive processing and expected experience. It features contributions from an interdisciplinary group of authors specializing in philosophy, psychology, cognitive science, and neuroscience. Predictive processing, or predictive coding, is the theory that the brain constantly minimizes the error of its predictions based on the sensory input it receives from the world. This process of prediction error minimization has numerous implications for different forms of conscious and perceptual experience. The chapters in this volume explore these implications and various phenomena related to them. The contributors tackle issues related to precision estimation, sensory prediction, probabilistic perception, and attention, as well as the role predictive processing plays in emotion, action, psychotic experience, anosognosia, and gut complex. Expected Experiences will be of interest to scholars and advanced students in philosophy, psychology, and cognitive science working on issues related to predictive processing and coding.
Book Synopsis Big Data in Cognitive Science by : Michael N. Jones
Download or read book Big Data in Cognitive Science written by Michael N. Jones and published by Psychology Press. This book was released on 2016-11-03 with total page 384 pages. Available in PDF, EPUB and Kindle. Book excerpt: While laboratory research is the backbone of collecting experimental data in cognitive science, a rapidly increasing amount of research is now capitalizing on large-scale and real-world digital data. Each piece of data is a trace of human behavior and offers us a potential clue to understanding basic cognitive principles. However, we have to be able to put the pieces together in a reasonable way, which necessitates both advances in our theoretical models and development of new methodological techniques. The primary goal of this volume is to present cutting-edge examples of mining large-scale and naturalistic data to discover important principles of cognition and evaluate theories that would not be possible without such a scale. This book also has a mission to stimulate cognitive scientists to consider new ways to harness big data in order to enhance our understanding of fundamental cognitive processes. Finally, this book aims to warn of the potential pitfalls of using, or being over-reliant on, big data and to show how big data can work alongside traditional, rigorously gathered experimental data rather than simply supersede it. In sum, this groundbreaking volume presents cognitive scientists and those in related fields with an exciting, detailed, stimulating, and realistic introduction to big data – and to show how it may greatly advance our understanding of the principles of human memory, perception, categorization, decision-making, language, problem-solving, and representation.
Book Synopsis Novel Applications of Bayesian and Other Models in Translational Neuroscience by : Reza Rastmanesh
Download or read book Novel Applications of Bayesian and Other Models in Translational Neuroscience written by Reza Rastmanesh and published by Frontiers Media SA. This book was released on 2024-05-06 with total page 169 pages. Available in PDF, EPUB and Kindle. Book excerpt: It has been proposed that the brain works in a Bayesian manner, and based on the free-energy principle, the brain's main function is to reduce environmental uncertainty; this is a proposed model as a universal principle governing adaptive brain function and structure. There are many pathophysiological, and clinical observations that can be easily explained by predictive Bayesian brain models. However, the novel applications of Bayesian models in translational neuroscience has been understudied and underreported. For example, variational Bayesian mixed-effects inference has been successfully tested for classification studies. A multi-task Bayesian compressive sensing approach to simultaneously estimate the full posterior of the CSA-ODF and diffusion-weighted volumes from multi-shell HARDI acquisitions has been recently publishe
