Automatic Diatom Identification

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Automatic Diatom Identification

Author : Hans Du Buf
Publisher : World Scientific
ISBN 13 : 9789810248864
Total Pages : 336 pages
Book Rating : 4.2/5 (488 download)

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Book Synopsis Automatic Diatom Identification by : Hans Du Buf

Download or read book Automatic Diatom Identification written by Hans Du Buf and published by World Scientific. This book was released on 2002 with total page 336 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is the first book to deal with automatic diatom identification. It provides the necessary background information concerning diatom research, useful for both diatomists and non-diatomists. It deals with the development of electronic databases, image preprocessing, automatic contour extraction, the application of existing contour and ornamentation features and the development of new ones, as well as the application of different classifiers (neural networks, decision trees, etc.). These are tested using two image sets: (i) a very difficult set of Sellaphora pupula with 6 demes and 120 images; (ii) a mixed genera set with 37 taxa and approximately 800 images. The results are excellent, and recognition rates well above 90% have been achieved on both sets. The results are compared with identification rates obtained by human experts. One chapter of the book deals with automatic image capture, i.e. microscope slide scanning at different resolutions using a motorized microscope stage, autofocusing, multifocus fusion, and particle screening to select only diatoms and to reject debris. This book is the final scientific report of the European ADIAC project (Automatic Diatom Identification and Classification), and it lists the web-sites with the created public databases and an identification demo.

Modern Trends in Diatom Identification

Author : Gabriel Cristóbal
Publisher : Springer Nature
ISBN 13 : 3030392120
Total Pages : 303 pages
Book Rating : 4.0/5 (33 download)

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Book Synopsis Modern Trends in Diatom Identification by : Gabriel Cristóbal

Download or read book Modern Trends in Diatom Identification written by Gabriel Cristóbal and published by Springer Nature. This book was released on 2020-05-28 with total page 303 pages. Available in PDF, EPUB and Kindle. Book excerpt: High-resolution images of phytoplankton cells such as diatoms or desmids, which are useful for monitoring water quality, can now be provided by digital microscopes, facilitating the automated analysis and identification of specimens. Conventional approaches are based on optical microscopy; however, manual image analysis is impractical due to the huge diversity of this group of microalgae and its great morphological plasticity. As such, there is a need for automated recognition techniques for diagnostic tools (e.g. environmental monitoring networks, early warning systems) to improve the management of water resources and decision-making processes. Describing the entire workflow of a bioindicator system, from capture, analysis and identification to the determination of quality indices, this book provides insights into the current state-of-the-art in automatic identification systems in microscopy.

Automatic Diatom Identification

Author : Micha M Bayer
Publisher : World Scientific
ISBN 13 : 9814489212
Total Pages : 329 pages
Book Rating : 4.8/5 (144 download)

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Book Synopsis Automatic Diatom Identification by : Micha M Bayer

Download or read book Automatic Diatom Identification written by Micha M Bayer and published by World Scientific. This book was released on 2002-07-12 with total page 329 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is the first book to deal with automatic diatom identification. It provides the necessary background information concerning diatom research, useful for both diatomists and non-diatomists. It deals with the development of electronic databases, image preprocessing, automatic contour extraction, the application of existing contour and ornamentation features and the development of new ones, as well as the application of different classifiers (neural networks, decision trees, etc.). These are tested using two image sets: (i) a very difficult set of Sellaphora pupula with 6 demes and 120 images; (ii) a mixed genera set with 37 taxa and approximately 800 images. The results are excellent, and recognition rates well above 90% have been achieved on both sets. The results are compared with identification rates obtained by human experts. One chapter of the book deals with automatic image capture, i.e. microscope slide scanning at different resolutions using a motorized microscope stage, autofocusing, multifocus fusion, and particle screening to select only diatoms and to reject debris. This book is the final scientific report of the European ADIAC project (Automatic Diatom Identification and Classification), and it lists the web-sites with the created public databases and an identification demo.

Diatom Morphogenesis

Author : Vadim V. Annenkov
Publisher : John Wiley & Sons
ISBN 13 : 1119487951
Total Pages : 452 pages
Book Rating : 4.1/5 (194 download)

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Book Synopsis Diatom Morphogenesis by : Vadim V. Annenkov

Download or read book Diatom Morphogenesis written by Vadim V. Annenkov and published by John Wiley & Sons. This book was released on 2021-11-23 with total page 452 pages. Available in PDF, EPUB and Kindle. Book excerpt: DIATOM MORPHOGENESIS A unique book presenting the range of silica structures formed by diatoms, theories and hypotheses of how they are made, and applications to nanotechnology by use or imitation of diatom morphogenesis. There are up to 200,000 species of diatoms, each species of these algal cells bearing an ornate, amorphous silica glass shell. The silica is structured at 7 orders of magnitude size range and is thus the most complex multiscalar solid structure known. Recent research is beginning to unravel how a single cell marshals chemical, physical, biochemical, genetic, and cytoskeletal processes to produce these single-cell marvels. The field of diatom nanotechnology is advancing as this understanding matures. Diatoms have been actively studied over the recent 10-20 years with various modern equipment, experimental and computer simulation approaches, including molecular biology, fluorescence-based methods, electron, confocal, and AFM microscopy. This has resulted in a huge amount of information but the key stages of their silica morphogenesis are still not clear. This is the time to reconsider and consolidate the work performed so far and to understand how we can go ahead. The main objective of this book is to describe the actual situation in the science of diatom morphogenesis, to specify the most important unresolved questions, and to present the corresponding hypotheses. The following areas are discussed: A tutorial chapter, with a glossary for newcomers to the field, who are often from outside of biology, let alone phycology; Diatom Morphogenesis: general issues, including symmetry and size issues; Diatom Morphogenesis: simulation, including analytical and numerical methods for description of the diatom valve shape and pore structure; Diatom Morphogenesis: physiology, biochemistry, and applications, including the relationship between taxonomy and physiology, biosilicification hypotheses, and ideas about applications of diatoms. Audience Researchers, scientists, and graduate students in the fields of phycology, general biology, marine sciences, the chemistry of silica, materials science, and ecology.

15th International Conference on Pattern Recognition

Author :
Publisher :
ISBN 13 : 9780769507507
Total Pages : 0 pages
Book Rating : 4.5/5 (75 download)

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Book Synopsis 15th International Conference on Pattern Recognition by :

Download or read book 15th International Conference on Pattern Recognition written by and published by . This book was released on 2000 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Diatom Gliding Motility

Author : Stanley A. Cohn
Publisher : John Wiley & Sons
ISBN 13 : 1119526353
Total Pages : 483 pages
Book Rating : 4.1/5 (195 download)

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Book Synopsis Diatom Gliding Motility by : Stanley A. Cohn

Download or read book Diatom Gliding Motility written by Stanley A. Cohn and published by John Wiley & Sons. This book was released on 2021-09-08 with total page 483 pages. Available in PDF, EPUB and Kindle. Book excerpt: DIATOM GLIDING MOTILITY Moving photosynthetic organisms are still a great mystery for biologists and this book summarizes what is known and reports the current understanding and modeling of those complex processes. The book covers a broad range of work describing our current state of understanding on the topic, including: historic knowledge and misconceptions of motility; evolution of diatom motility; diatom ecology & physiology; cell biology and biochemistry of diatom motility, anatomy of motile diatoms; observations of diatom motile behavior; diatom competitive ability, unique forms of diatom motility as found in the genus Eunotia; and models of motility. This is the first book attempting to gather such information surrounding diatom motility into one volume focusing on this single topic. Readers will be able to gather both the current state of understanding on the potential mechanisms and ecological regulators of motility, as well as possible models and approaches used to help determine how diatoms accomplish such varied behaviors as diurnal movements, accumulation into areas of light, niche partitioning to increase species success. Given the fact that diatoms remain one of the most ecologically crucial cells in aquatic ecosystems, we hope that this volume will act as a springboard towards future research into diatom motility and even better resolution of some of the issues in motility. Audience Diatomists, phycologists, aquatic ecologists, cellular physiologists, environmental biologists, biophysicists, diatom nanotechnologists, algal ecologists, taxonomists.

Automated Taxon Identification in Systematics

Author : Norman MacLeod
Publisher : CRC Press
ISBN 13 : 1420008072
Total Pages : 370 pages
Book Rating : 4.4/5 (2 download)

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Book Synopsis Automated Taxon Identification in Systematics by : Norman MacLeod

Download or read book Automated Taxon Identification in Systematics written by Norman MacLeod and published by CRC Press. This book was released on 2007-07-23 with total page 370 pages. Available in PDF, EPUB and Kindle. Book excerpt: The automated identification of biological objects or groups has been a dream among taxonomists and systematists for centuries. However, progress in designing and implementing practical systems for fully automated taxon identification has been frustratingly slow. Regardless, the dream has never died. Recent developments in computer architectures an

Real-time Coastal Observing Systems for Marine Ecosystem Dynamics and Harmful Algal Blooms

Author : Babin, Marcel
Publisher : UNESCO
ISBN 13 : 9231040421
Total Pages : 880 pages
Book Rating : 4.2/5 (31 download)

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Book Synopsis Real-time Coastal Observing Systems for Marine Ecosystem Dynamics and Harmful Algal Blooms by : Babin, Marcel

Download or read book Real-time Coastal Observing Systems for Marine Ecosystem Dynamics and Harmful Algal Blooms written by Babin, Marcel and published by UNESCO. This book was released on 2008-06-05 with total page 880 pages. Available in PDF, EPUB and Kindle. Book excerpt: The proliferation of harmful phytoplankton in marine ecosystems can cause massive fish kills, contaminate seafood with toxins, impact local and regional economies and dramatically affect ecological balance. Real-time observations are essential for effective short-term operational forecasting, but observation and modelling systems are still being developed. This volume provides guidance for developing real-time and near real-time sensing systems for observing and predicting plankton dynamics, including harmful algal blooms, in coastal waters. The underlying theory is explained and current trends in research and monitoring are discussed.Topics covered include: coastal ecosystems and dynamics of harmful algal blooms; theory and practical applications of in situ and remotely sensed optical detection of microalgal distributions and composition; theory and practical applications of in situ biological and chemical sensors for targeted species and toxin detection; integrated observing systems and platforms for detection; diagnostic and predictive modelling of ecosystems and harmful algal blooms, including data assimilation techniques; observational needs for the public and government; and future directions for research and operations.

Advances in Phytoplankton Ecology

Author : Lesley Clementson
Publisher : Elsevier
ISBN 13 : 012822861X
Total Pages : 612 pages
Book Rating : 4.1/5 (282 download)

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Book Synopsis Advances in Phytoplankton Ecology by : Lesley Clementson

Download or read book Advances in Phytoplankton Ecology written by Lesley Clementson and published by Elsevier. This book was released on 2021-12-10 with total page 612 pages. Available in PDF, EPUB and Kindle. Book excerpt: Phytoplankton ecology has developed from an understanding of taxonomy, species dynamics and functional roles, and species interactions with the surrounding environment. New and emerging technologies enable a paradigm shift in the ways we monitor and understand phytoplankton in a range of environments. Advances in Phytoplankton Ecology: Applications of Emerging Technologies is a practical guide to these new technologies and explores their application with case studies to show how recent advances have changed our understanding of phytoplankton ecology. Part one of this book explores how traditional taxonomy and species identification has changed, moving from morphological to molecular techniques. Part two explores the new technologies for remote and automatic monitoring and sensor technology and applications for management. Part three explores the explosion of omics techniques and their application in species identification, functional populations, trait characterization, interspecific interactions, and interaction with their environment. This book is an invaluable guide for marine and freshwater ecology researchers to how new technologies can enhance our understanding of ecology. Combines traditional techniques with new technologies and methods Explores the influence of new technology on our understanding of phytoplankton ecology Provides practical applications of each technique through case studies in each chapter

Diatom Nanotechnology

Author : Dusan Losic
Publisher : Royal Society of Chemistry
ISBN 13 : 1782629327
Total Pages : 286 pages
Book Rating : 4.7/5 (826 download)

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Book Synopsis Diatom Nanotechnology by : Dusan Losic

Download or read book Diatom Nanotechnology written by Dusan Losic and published by Royal Society of Chemistry. This book was released on 2018 with total page 286 pages. Available in PDF, EPUB and Kindle. Book excerpt: A comprehensive overview of the unique porous silica structure of diatoms, their mechanism of formation, properties and applications.

The Ecology of Phytoplankton

Author : C. S. Reynolds
Publisher : Cambridge University Press
ISBN 13 : 1139454897
Total Pages : 437 pages
Book Rating : 4.1/5 (394 download)

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Book Synopsis The Ecology of Phytoplankton by : C. S. Reynolds

Download or read book The Ecology of Phytoplankton written by C. S. Reynolds and published by Cambridge University Press. This book was released on 2006-05-04 with total page 437 pages. Available in PDF, EPUB and Kindle. Book excerpt: This important new book by Colin Reynolds covers the adaptations, physiology and population dynamics of phytoplankton communities. It provides basic information on composition, morphology and physiology of the main phyletic groups represented in marine and freshwater systems and in addition reviews recent advances in community ecology.

A Taxonomic Guide to Some Common Marine Phytoplankton

Author : Rita A. Horner
Publisher :
ISBN 13 :
Total Pages : 218 pages
Book Rating : 4.:/5 (318 download)

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Book Synopsis A Taxonomic Guide to Some Common Marine Phytoplankton by : Rita A. Horner

Download or read book A Taxonomic Guide to Some Common Marine Phytoplankton written by Rita A. Horner and published by . This book was released on 2002 with total page 218 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Chlorophyll a Fluorescence in Aquatic Sciences: Methods and Applications

Author : David J. Suggett
Publisher : Springer Science & Business Media
ISBN 13 : 9048192684
Total Pages : 332 pages
Book Rating : 4.0/5 (481 download)

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Book Synopsis Chlorophyll a Fluorescence in Aquatic Sciences: Methods and Applications by : David J. Suggett

Download or read book Chlorophyll a Fluorescence in Aquatic Sciences: Methods and Applications written by David J. Suggett and published by Springer Science & Business Media. This book was released on 2010-08-23 with total page 332 pages. Available in PDF, EPUB and Kindle. Book excerpt: Measurements of variable chlorophyll fluorescence have revolutionised global research of photosynthetic bacteria, algae and plants and in turn assessment of the status of aquatic ecosystems, a success that has partly been facilitated by the widespread commercialisation of a suite of chlorophyll fluorometers designed for almost every application in lakes, rivers and oceans. Numerous publications have been produced as researchers and assessors have simultaneously sought to optimise protocols and practices for key organisms or water bodies; however, such parallel efforts have led to difficulties in reconciling processes and patterns across the aquatic sciences. This book follows on from the first international conference on “chlorophyll fluorescence in the aquatic sciences” (AQUAFLUO 2007): to bridge the gaps between the concept, measurement and application of chlorophyll fluorescence through the synthesis and integration of current knowledge from leading researchers and assessors as well as instrument manufacturers.

An Illustrated Guide to Some Common Diatom Species from South Africa

Author : Jonathan Charles Taylor
Publisher :
ISBN 13 : 9781770054844
Total Pages : 178 pages
Book Rating : 4.0/5 (548 download)

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Book Synopsis An Illustrated Guide to Some Common Diatom Species from South Africa by : Jonathan Charles Taylor

Download or read book An Illustrated Guide to Some Common Diatom Species from South Africa written by Jonathan Charles Taylor and published by . This book was released on 2007 with total page 178 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Phytoplankton Manual

Author : Alain Sournia
Publisher :
ISBN 13 :
Total Pages : 366 pages
Book Rating : 4.:/5 (318 download)

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Book Synopsis Phytoplankton Manual by : Alain Sournia

Download or read book Phytoplankton Manual written by Alain Sournia and published by . This book was released on 1978 with total page 366 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Learning to Think Spatially

Author : National Research Council
Publisher : National Academies Press
ISBN 13 : 0309092086
Total Pages : 333 pages
Book Rating : 4.3/5 (9 download)

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Book Synopsis Learning to Think Spatially by : National Research Council

Download or read book Learning to Think Spatially written by National Research Council and published by National Academies Press. This book was released on 2005-02-03 with total page 333 pages. Available in PDF, EPUB and Kindle. Book excerpt: Learning to Think Spatially examines how spatial thinking might be incorporated into existing standards-based instruction across the school curriculum. Spatial thinking must be recognized as a fundamental part of Kâ€"12 education and as an integrator and a facilitator for problem solving across the curriculum. With advances in computing technologies and the increasing availability of geospatial data, spatial thinking will play a significant role in the information-based economy of the twenty-first century. Using appropriately designed support systems tailored to the Kâ€"12 context, spatial thinking can be taught formally to all students. A geographic information system (GIS) offers one example of a high-technology support system that can enable students and teachers to practice and apply spatial thinking in many areas of the curriculum.

Identification of Freshwater Diatoms from Live Material

Author : E.J. Cox
Publisher : Springer
ISBN 13 :
Total Pages : 178 pages
Book Rating : 4.:/5 (318 download)

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Book Synopsis Identification of Freshwater Diatoms from Live Material by : E.J. Cox

Download or read book Identification of Freshwater Diatoms from Live Material written by E.J. Cox and published by Springer. This book was released on 1996-08-31 with total page 178 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is the first to provide an identification key to this important freshwater group of algae which enables the user to work from live specimens. The use of fresh material means that time-consuming preparation techniques can be avoided enabling analyses to be made within a short time of collection. Also the diatoms can be counted, identified and studied at the same time as other algae in the sample. The book provides a general introduction to the diatoms including a resume of the variety of chloroplast forms encountered, a review of colony types, a guide to shape terminology and also information on how to measure cells. The keys are designed for the specialist and the non-specialist alike, allowing two points of entry and the identification of most common taxa to species level. When cleaned material is necessary for unequivocal identification, this is indicated. The book also contains a list of all species included with brief ecological notes on occurrences and distribution along with a glossary of terms. This book will be of immense use to biologists studying algal communities in freshwater ecosystems and particularly to those involved in monitoring programmes. The increasing realization of the importance of algae to the health of aquatic ecosystems, and the developing use of diatoms as environmental indicators means that this volume will become an invaluable aid to the water industries and environmental protection agencies.