Understanding Tertiary Interactions In Protein Structures

Download Understanding Tertiary Interactions In Protein Structures full books in PDF, epub, and Kindle. Read online Understanding Tertiary Interactions In Protein Structures ebook anywhere anytime directly on your device. Fast Download speed and no annoying ads. We cannot guarantee that every ebooks is available!

Understanding Tertiary Interactions in Protein Structures

Download Understanding Tertiary Interactions in Protein Structures PDF Online Free

Author : Tejdeep Singh Bawa
Publisher : LAP Lambert Academic Publishing
ISBN 13 : 9783843394031
Total Pages : 64 pages
Book Rating : 4.3/5 (94 download)

Book Synopsis Understanding Tertiary Interactions in Protein Structures by : Tejdeep Singh Bawa

Download or read book Understanding Tertiary Interactions in Protein Structures written by Tejdeep Singh Bawa and published by LAP Lambert Academic Publishing. This book was released on 2011-02 with total page 64 pages. Available in PDF, EPUB and Kindle. Book excerpt: Three-dimensional structures of proteins are the support of their biological functions.Their folds are stabilized by contacts between residues.Inner protein contacts are generally described through direct atomic contacts, while contact prediction methods mainly used inter-C distances. During the process of protein folding, the amino acid residues along the polypeptide chain interact with each other in a cooperative manner to form a stable native structure.The knowledge about inter-residue interactions in protein structures is helpful to understand the mechanism of protein folding and stability.It provides valuable insights for understanding protein folding and de novo protein design.I analyzed protein contacts on a high quality non-redundant pdbs drawn from protein databank using various criteria. I have computed the average number of contacts depending on the distance threshold to define a contact.Preferential contacts between types of amino acids have been highlighted. Detailed analysis have been done concerning the proximity of contacts in the sequence, the size of the proteins and fold classes.The strongest differences have been extracted, highlighting important residues

Molecular Biology of The Cell

Download Molecular Biology of The Cell PDF Online Free

Author : Bruce Alberts
Publisher :
ISBN 13 : 9780815332183
Total Pages : 0 pages
Book Rating : 4.3/5 (321 download)

Book Synopsis Molecular Biology of The Cell by : Bruce Alberts

Download or read book Molecular Biology of The Cell written by Bruce Alberts and published by . This book was released on 2002 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt:

The Protein Folding Problem and Tertiary Structure Prediction

Download The Protein Folding Problem and Tertiary Structure Prediction PDF Online Free

Author : Kenneth M.Jr. Merz
Publisher : Springer Science & Business Media
ISBN 13 : 1468468316
Total Pages : 585 pages
Book Rating : 4.4/5 (684 download)

Book Synopsis The Protein Folding Problem and Tertiary Structure Prediction by : Kenneth M.Jr. Merz

Download or read book The Protein Folding Problem and Tertiary Structure Prediction written by Kenneth M.Jr. Merz and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 585 pages. Available in PDF, EPUB and Kindle. Book excerpt: A solution to the protein folding problem has eluded researchers for more than 30 years. The stakes are high. Such a solution will make 40,000 more tertiary structures available for immediate study by translating the DNA sequence information in the sequence databases into three-dimensional protein structures. This translation will be indispensable for the analy sis of results from the Human Genome Project, de novo protein design, and many other areas of biotechnological research. Finally, an in-depth study of the rules of protein folding should provide vital clues to the protein fold ing process. The search for these rules is therefore an important objective for theoretical molecular biology. Both experimental and theoretical ap proaches have been used in the search for a solution, with many promising results but no general solution. In recent years, there has been an exponen tial increase in the power of computers. This has triggered an incredible outburst of theoretical approaches to solving the protein folding problem ranging from molecular dynamics-based studies of proteins in solution to the actual prediction of protein structures from first principles. This volume attempts to present a concise overview of these advances. Adrian Roitberg and Ron Elber describe the locally enhanced sam pling/simulated annealing conformational search algorithm (Chapter 1), which is potentially useful for the rapid conformational search of larger molecular systems.

Computer Assisted Modeling

Download Computer Assisted Modeling PDF Online Free

Author : National Research Council
Publisher : National Academies Press
ISBN 13 : 0309062284
Total Pages : 186 pages
Book Rating : 4.3/5 (9 download)

Book Synopsis Computer Assisted Modeling by : National Research Council

Download or read book Computer Assisted Modeling written by National Research Council and published by National Academies Press. This book was released on 1987-02-01 with total page 186 pages. Available in PDF, EPUB and Kindle. Book excerpt: In much of biology, the search for understanding the relation between structure and function is now taking place at the macromolecular level. Proteins, nucleic acids, and polysaccharides are macromolecule--polymers formed from families of simpler subunits. Because of their size and complexity, the polymers are capable of both inter- and intramolecular interactions. These interactions confer upon the polymers distinctive three-dimensional shapes. These tertiary configurations, in turn, determine the function of the macromolecule. Computers have become so inextricably involved in empirical studies of three-dimensional macromolecular structure that mathematical modeling, or theory, and experimental approaches are interrelated aspects of a single enterprise.

Protein Stability

Download Protein Stability PDF Online Free

Author : David S. Eisenberg
Publisher :
ISBN 13 : 9780120342464
Total Pages : 334 pages
Book Rating : 4.3/5 (424 download)

Book Synopsis Protein Stability by : David S. Eisenberg

Download or read book Protein Stability written by David S. Eisenberg and published by . This book was released on 1995 with total page 334 pages. Available in PDF, EPUB and Kindle. Book excerpt: The topics covered by this volume include: protein destabilization at low temperatures; engineering the stability and function of Gene V Protein; free energy balance in protein folding; modelling protein stability as a heteropolymer collapse; stability of alpha helices; protein stability with T4 Lysozyme.

Biology for AP ® Courses

Download Biology for AP ® Courses PDF Online Free

Author : Julianne Zedalis
Publisher :
ISBN 13 : 9781947172401
Total Pages : 1923 pages
Book Rating : 4.1/5 (724 download)

Book Synopsis Biology for AP ® Courses by : Julianne Zedalis

Download or read book Biology for AP ® Courses written by Julianne Zedalis and published by . This book was released on 2017-10-16 with total page 1923 pages. Available in PDF, EPUB and Kindle. Book excerpt: Biology for AP® courses covers the scope and sequence requirements of a typical two-semester Advanced Placement® biology course. The text provides comprehensive coverage of foundational research and core biology concepts through an evolutionary lens. Biology for AP® Courses was designed to meet and exceed the requirements of the College Board’s AP® Biology framework while allowing significant flexibility for instructors. Each section of the book includes an introduction based on the AP® curriculum and includes rich features that engage students in scientific practice and AP® test preparation; it also highlights careers and research opportunities in biological sciences.

Structure in Protein Chemistry

Download Structure in Protein Chemistry PDF Online Free

Author : Jack Kyte
Publisher : Garland Science
ISBN 13 : 1136843515
Total Pages : 832 pages
Book Rating : 4.1/5 (368 download)

Book Synopsis Structure in Protein Chemistry by : Jack Kyte

Download or read book Structure in Protein Chemistry written by Jack Kyte and published by Garland Science. This book was released on 2006-11-01 with total page 832 pages. Available in PDF, EPUB and Kindle. Book excerpt: The second edition of Structure in Protein Chemistry showcases the latest developments and innovations in the field of protein structure analysis and prediction. The book begins by explaining how proteins are purified and describes methods for elucidating their sequences of amino acids and defining their posttranslational modifications. Comprehensive explanations of crystallography and of noncovalent forces-ionic interactions, hydrogen bonding, and the hydrophobic effect-act as a prelude to an exhaustive description of the atomic details of the structures of proteins. The resulting understanding of protein molecular structure forms the basis for discussions of the evolution of proteins, the symmetry of the oligomeric associations that produce them, and the chemical, mathematical, and physical basis of the techniques used to study their structures. The latter include image reconstruction, nuclear magnetic resonance spectroscopy, proton exchange, optical spectroscopy, electrophoresis, covalent cross-linking, chemical modification, immunochemistry, hydrodynamics, and the scattering of light, X-radiation, and neutrons. These procedures are applied to study the folding of polypeptides and the assembly of oligomers. Biological membranes and their proteins are also discussed. Structure in Protein Chemistry, Second Edition, bridges the gap between introductory biophysical chemistry courses and research literature. It serves as a comprehensive textbook for advanced undergraduates and graduate students in biochemistry, biophysics, and structural and molecular biology. Professionals engaged in chemical, biochemical, and molecular biological research will find it a useful reference.

Introduction to Protein Structure

Download Introduction to Protein Structure PDF Online Free

Author : Carl Ivar Branden
Publisher : Garland Science
ISBN 13 : 1136969896
Total Pages : 424 pages
Book Rating : 4.1/5 (369 download)

Book Synopsis Introduction to Protein Structure by : Carl Ivar Branden

Download or read book Introduction to Protein Structure written by Carl Ivar Branden and published by Garland Science. This book was released on 2012-03-26 with total page 424 pages. Available in PDF, EPUB and Kindle. Book excerpt: The VitalBook e-book of Introduction to Protein Structure, Second Edition is inly available in the US and Canada at the present time. To purchase or rent please visit http://store.vitalsource.com/show/9780815323051Introduction to Protein Structure provides an account of the principles of protein structure, with examples of key proteins in their bio

Textbook Of Structural Biology (Second Edition)

Download Textbook Of Structural Biology (Second Edition) PDF Online Free

Author : Anders Liljas
Publisher : World Scientific
ISBN 13 : 9813142499
Total Pages : 610 pages
Book Rating : 4.8/5 (131 download)

Book Synopsis Textbook Of Structural Biology (Second Edition) by : Anders Liljas

Download or read book Textbook Of Structural Biology (Second Edition) written by Anders Liljas and published by World Scientific. This book was released on 2016-09-27 with total page 610 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides a comprehensive coverage of the basic principles of structural biology, as well as an up-to-date summary of some main directions of research in the field. The relationship between structure and function is described in detail for soluble proteins, membrane proteins, membranes, and nucleic acids.There are several books covering protein structure and function, but none that give a complete picture, including nucleic acids, lipids, membranes and carbohydrates, all being of central importance in structural biology.The book covers state-of-the-art research in various areas. It is unique for its breadth of coverage by experts in the fields. The book is richly illustrated with more than 400 color figures to highlight the wide range of structures.

Protein Bioinformatics

Download Protein Bioinformatics PDF Online Free

Author : M. Michael Gromiha
Publisher : Academic Press
ISBN 13 : 0123884241
Total Pages : 349 pages
Book Rating : 4.1/5 (238 download)

Book Synopsis Protein Bioinformatics by : M. Michael Gromiha

Download or read book Protein Bioinformatics written by M. Michael Gromiha and published by Academic Press. This book was released on 2011-04-21 with total page 349 pages. Available in PDF, EPUB and Kindle. Book excerpt: One of the most pressing tasks in biotechnology today is to unlock the function of each of the thousands of new genes identified every day. Scientists do this by analyzing and interpreting proteins, which are considered the task force of a gene. This single source reference covers all aspects of proteins, explaining fundamentals, synthesizing the latest literature, and demonstrating the most important bioinformatics tools available today for protein analysis, interpretation and prediction. Students and researchers of biotechnology, bioinformatics, proteomics, protein engineering, biophysics, computational biology, molecular modeling, and drug design will find this a ready reference for staying current and productive in this fast evolving interdisciplinary field. Explains all aspects of proteins including sequence and structure analysis, prediction of protein structures, protein folding, protein stability, and protein interactions Presents a cohesive and accessible overview of the field, using illustrations to explain key concepts and detailed exercises for students.

Frontiers in Protein Structure, Function, and Dynamics

Download Frontiers in Protein Structure, Function, and Dynamics PDF Online Free

Author : Dev Bukhsh Singh
Publisher : Springer Nature
ISBN 13 : 9811555303
Total Pages : 458 pages
Book Rating : 4.8/5 (115 download)

Book Synopsis Frontiers in Protein Structure, Function, and Dynamics by : Dev Bukhsh Singh

Download or read book Frontiers in Protein Structure, Function, and Dynamics written by Dev Bukhsh Singh and published by Springer Nature. This book was released on 2020-07-02 with total page 458 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book discusses a broad range of basic and advanced topics in the field of protein structure, function, folding, flexibility, and dynamics. Starting with a basic introduction to protein purification, estimation, storage, and its effect on the protein structure, function, and dynamics, it also discusses various experimental and computational structure determination approaches; the importance of molecular interactions and water in protein stability, folding and dynamics; kinetic and thermodynamic parameters associated with protein-ligand binding; single molecule techniques and their applications in studying protein folding and aggregation; protein quality control; the role of amino acid sequence in protein aggregation; muscarinic acetylcholine receptors, antimuscarinic drugs, and their clinical significances. Further, the book explains the current understanding on the therapeutic importance of the enzyme dopamine beta hydroxylase; structural dynamics and motions in molecular motors; role of cathepsins in controlling degradation of extracellular matrix during disease states; and the important structure-function relationship of iron-binding proteins, ferritins. Overall, the book is an important guide and a comprehensive resource for understanding protein structure, function, dynamics, and interaction.

Biochemistry

Download Biochemistry PDF Online Free

Author : Christopher K. Mathews
Publisher : Addison-Wesley
ISBN 13 : 9780201702354
Total Pages : 1186 pages
Book Rating : 4.7/5 (23 download)

Book Synopsis Biochemistry by : Christopher K. Mathews

Download or read book Biochemistry written by Christopher K. Mathews and published by Addison-Wesley. This book was released on 2000 with total page 1186 pages. Available in PDF, EPUB and Kindle. Book excerpt: The authors present the discipline of biochemistry from both a biochemist's and biological perspective in this third edition of Biochemistry. A Web site and supplementary CD-ROM provide additional material for instructors and students.

Microbial Biochemistry

Download Microbial Biochemistry PDF Online Free

Author : G. N. Cohen
Publisher : Springer
ISBN 13 : 9401789088
Total Pages : 618 pages
Book Rating : 4.4/5 (17 download)

Book Synopsis Microbial Biochemistry by : G. N. Cohen

Download or read book Microbial Biochemistry written by G. N. Cohen and published by Springer. This book was released on 2014-07-21 with total page 618 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microbial physiology, biochemistry and genetics allowed the formulation of concepts that turned out to be important in the study of higher organisms. In the first section, the principles of bacterial growth are given, as well as the description of the different layers that enclose the bacterial cytoplasm, and their role in obtaining nutrients from the outside media through different permeability mechanism described in detail. A chapter is devoted to allostery and is indispensable for the comprehension of many regulatory mechanisms described throughout the book. Another section analyses the mechanisms by which cells obtain the energy necessary for their growth, glycolysis, the pentose phosphate pathway, the tricarboxylic and the anaplerotic cycles. Two chapters are devoted to classes of microorganisms rarely dealt with in textbooks, namely the Archaea, mainly the methanogenic bacteria, and the methylotrophs. Eight chapters describe the principles of the regulations at the transcriptional level, with the necessary knowledge of the machineries of transcription and translation. The next fifteen chapters deal with the biosynthesis of the cell building blocks, amino acids, purine and pyrimidine nucleotides and deoxynucleotides, water-soluble vitamins and coenzymes, isoprene and tetrapyrrole derivatives and vitamin B12. The two last chapters are devoted to the study of protein-DNA interactions and to the evolution of biosynthetic pathways. The considerable advances made in the last thirty years in the field by the introduction of gene cloning and sequencing and by the exponential development of physical methods such as X-ray crystallography or nuclear magnetic resonance have helped presenting metabolism under a multidisciplinary attractive angle.

Protein Structure and Function

Download Protein Structure and Function PDF Online Free

Author : Gregory A. Petsko
Publisher : New Science Press
ISBN 13 : 0878936637
Total Pages : 220 pages
Book Rating : 4.8/5 (789 download)

Book Synopsis Protein Structure and Function by : Gregory A. Petsko

Download or read book Protein Structure and Function written by Gregory A. Petsko and published by New Science Press. This book was released on 2004 with total page 220 pages. Available in PDF, EPUB and Kindle. Book excerpt: Each title in the 'Primers in Biology' series is constructed on a modular principle that is intended to make them easy to teach from, to learn from, and to use for reference.

Prediction of Protein Structure and the Principles of Protein Conformation

Download Prediction of Protein Structure and the Principles of Protein Conformation PDF Online Free

Author : G.D. Fasman
Publisher : Springer Science & Business Media
ISBN 13 : 1461315719
Total Pages : 796 pages
Book Rating : 4.4/5 (613 download)

Book Synopsis Prediction of Protein Structure and the Principles of Protein Conformation by : G.D. Fasman

Download or read book Prediction of Protein Structure and the Principles of Protein Conformation written by G.D. Fasman and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 796 pages. Available in PDF, EPUB and Kindle. Book excerpt: The prediction of the conformation of proteins has developed from an intellectual exercise into a serious practical endeavor that has great promise to yield new stable enzymes, products of pharmacological significance, and catalysts of great potential. With the application of predic tion gaining momentum in various fields, such as enzymology and immunology, it was deemed time that a volume be published to make available a thorough evaluation of present methods, for researchers in this field to expound fully the virtues of various algorithms, to open the field to a wider audience, and to offer the scientific public an opportunity to examine carefully its successes and failures. In this manner the practitioners of the art could better evaluate the tools and the output so that their expectations and applications could be more realistic. The editor has assembled chapters by many of the main contributors to this area and simultaneously placed their programs at three national resources so that they are readily available to those who wish to apply them to their personal interests. These algorithms, written by their originators, when utilized on pes or larger computers, can instantaneously take a primary amino acid sequence and produce a two-or three-dimensional artistic image that gives satisfaction to one's esthetic sensibilities and food for thought concerning the structure and function of proteins. It is in this spirit that this volume was envisaged.

The Membranes of Cells

Download The Membranes of Cells PDF Online Free

Author : Philip Yeagle
Publisher :
ISBN 13 :
Total Pages : 376 pages
Book Rating : 4.3/5 (91 download)

Book Synopsis The Membranes of Cells by : Philip Yeagle

Download or read book The Membranes of Cells written by Philip Yeagle and published by . This book was released on 1993 with total page 376 pages. Available in PDF, EPUB and Kindle. Book excerpt: In this new edition of The Membranes of Cells, all of the chapters have been updated, some have been completely rewritten, and a new chapter on receptors has been added. The book has been designed to provide both the student and researcher with a synthesis of information from a number of scientific disciplines to create a comprehensive view of the structure and function of the membranes of cells. The topics are treated in sufficient depth to provide an entry point to the more detailed literature needed by the researcher. Key Features * Introduces biologists to membrane structure and physical chemistry * Introduces biophysicists to biological membrane function * Provides a comprehensive view of cell membranes to students, either as a necessary background for other specialized disciplines or as an entry into the field of biological membrane research * Clarifies ambiguities in the field

Conserved Tertiary Interactions and [alpha]-helical Interaction Motifs in Protein Structure

Download Conserved Tertiary Interactions and [alpha]-helical Interaction Motifs in Protein Structure PDF Online Free

Author : Gary Loren Kleiger
Publisher :
ISBN 13 :
Total Pages : 200 pages
Book Rating : 4.:/5 ( download)

Book Synopsis Conserved Tertiary Interactions and [alpha]-helical Interaction Motifs in Protein Structure by : Gary Loren Kleiger

Download or read book Conserved Tertiary Interactions and [alpha]-helical Interaction Motifs in Protein Structure written by Gary Loren Kleiger and published by . This book was released on 2002 with total page 200 pages. Available in PDF, EPUB and Kindle. Book excerpt: