Statistical Methods for Imbalanced Data in Ecological and Biological Studies

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Publisher : Springer
ISBN 13 : 4431555706
Total Pages : 59 pages
Book Rating : 4.4/5 (315 download)

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Book Synopsis Statistical Methods for Imbalanced Data in Ecological and Biological Studies by : Osamu Komori

Download or read book Statistical Methods for Imbalanced Data in Ecological and Biological Studies written by Osamu Komori and published by Springer. This book was released on 2019-07-02 with total page 59 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents a fresh, new approach in that it provides a comprehensive recent review of challenging problems caused by imbalanced data in prediction and classification, and also in that it introduces several of the latest statistical methods of dealing with these problems. The book discusses the property of the imbalance of data from two points of view. The first is quantitative imbalance, meaning that the sample size in one population highly outnumbers that in another population. It includes presence-only data as an extreme case, where the presence of a species is confirmed, whereas the information on its absence is uncertain, which is especially common in ecology in predicting habitat distribution. The second is qualitative imbalance, meaning that the data distribution of one population can be well specified whereas that of the other one shows a highly heterogeneous property. A typical case is the existence of outliers commonly observed in gene expression data, and another is heterogeneous characteristics often observed in a case group in case-control studies. The extension of the logistic regression model, maxent, and AdaBoost for imbalanced data is discussed, providing a new framework for improvement of prediction, classification, and performance of variable selection. Weights functions introduced in the methods play an important role in alleviating the imbalance of data. This book also furnishes a new perspective on these problem and shows some applications of the recently developed statistical methods to real data sets.

Sampling Design and Statistical Methods for Environmental Biologists

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Publisher : John Wiley & Sons
ISBN 13 : 9780471039013
Total Pages : 278 pages
Book Rating : 4.0/5 (39 download)

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Book Synopsis Sampling Design and Statistical Methods for Environmental Biologists by : Roger H. Green

Download or read book Sampling Design and Statistical Methods for Environmental Biologists written by Roger H. Green and published by John Wiley & Sons. This book was released on 1979-05-01 with total page 278 pages. Available in PDF, EPUB and Kindle. Book excerpt: Provides--in an organized and compact source--a comprehensive guide to the principles of sampling design and statistical analysis methods. Reviews the principles of inference, sampling and statistical design, and hypothesis formulation, all with special reference to ecological data. Includes an impact study illustrating the principles presented. Contains a key to five broad categories of environmental studies--as well as examples and examines specific topics that apply to any environmental study. Provides a comprehensive bibliography which is cross-referenced to the text and keyed to a specific topic code (types of methods and environments studied).

Statistical Methods for Field and Laboratory Studies in Behavioral Ecology

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Publisher : CRC Press
ISBN 13 : 1351723154
Total Pages : 313 pages
Book Rating : 4.3/5 (517 download)

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Book Synopsis Statistical Methods for Field and Laboratory Studies in Behavioral Ecology by : Scott Pardo

Download or read book Statistical Methods for Field and Laboratory Studies in Behavioral Ecology written by Scott Pardo and published by CRC Press. This book was released on 2018-03-05 with total page 313 pages. Available in PDF, EPUB and Kindle. Book excerpt: Statistical Methods for Field and Laboratory Studies in Behavioral Ecology focuses on how statistical methods may be used to make sense of behavioral ecology and other data. It presents fundamental concepts in statistical inference and intermediate topics such as multiple least squares regression and ANOVA. The objective is to teach students to recognize situations where various statistical methods should be used, understand the strengths and limitations of the methods, and to show how they are implemented in R code. Examples are based on research described in the literature of behavioral ecology, with data sets and analysis code provided. Features: This intermediate to advanced statistical methods text was written with the behavioral ecologist in mind Computer programs are provided, written in the R language. Datasets are also provided, mostly based, at least to some degree, on real studies. Methods and ideas discussed include multiple regression and ANOVA, logistic and Poisson regression, machine learning and model identification, time-to-event modeling, time series and stochastic modeling, game-theoretic modeling, multivariate methods, study design/sample size, and what to do when things go wrong. It is assumed that the reader has already had exposure to statistics through a first introductory course at least, and also has sufficient knowledge of R. However, some introductory material is included to aid the less initiated reader. Scott Pardo, Ph.D., is an accredited professional statistician (PStat®) by the American Statistical Association. Michael Pardo is a Ph.D. is a candidate in behavioral ecology at Cornell University, specializing in animal communication and social behavior.

Statistical Ecology

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Publisher : Springer Science & Business Media
ISBN 13 : 9780412047114
Total Pages : 586 pages
Book Rating : 4.0/5 (471 download)

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Book Synopsis Statistical Ecology by : Linda J. Young

Download or read book Statistical Ecology written by Linda J. Young and published by Springer Science & Business Media. This book was released on 1998-07-31 with total page 586 pages. Available in PDF, EPUB and Kindle. Book excerpt: Covering a wide range of disciplines, this book explains the formulae, techniques, and methods used in field ecology. By providing an awareness of the statistical foundation for existing methods, the book will make biologists more aware of the strengths and possible weaknesses of procedures employed, and statisticians more appreciative of the needs of the field ecologist. Unique to this book is a focus on ecological data for single-species populations, from sampling through modeling. Examples come from real situations in pest management, forestry, wildlife biology, plant protection, and environmental studies, as well as from classical ecology. All those using this book will acquire a strong foundation in the statistical methods of modern ecological research. This textbook is for late undergraduate and graduate students, and for professionals.

Sampling and Statistical Methods for Behavioral Ecologists

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Publisher : Cambridge University Press
ISBN 13 : 9780521457057
Total Pages : 362 pages
Book Rating : 4.4/5 (57 download)

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Book Synopsis Sampling and Statistical Methods for Behavioral Ecologists by : Jonathan Bart

Download or read book Sampling and Statistical Methods for Behavioral Ecologists written by Jonathan Bart and published by Cambridge University Press. This book was released on 1998-12-10 with total page 362 pages. Available in PDF, EPUB and Kindle. Book excerpt: This 1998 book describes the sampling and statistical methods used most often by behavioral ecologists and field biologists. Written by a biologist and two statisticians, it provides a rigorous discussion together with worked examples of statistical concepts and methods that are generally not covered in introductory courses, and which are consequently poorly understood and applied by field biologists. The first section reviews important issues such as defining the statistical population and the sampling plan when using non-random methods for sample selection, bias, interpretation of statistical tests, confidence intervals and multiple comparisons. After a detailed discussion of sampling methods and multiple regression, subsequent chapters discuss specialized problems such as pseudoreplication, and their solutions. It will quickly become the statistical handbook for all field biologists.

Statistical Methods in Biology

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Publisher : CRC Press
ISBN 13 : 1439808783
Total Pages : 606 pages
Book Rating : 4.4/5 (398 download)

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Book Synopsis Statistical Methods in Biology by : S.J. Welham

Download or read book Statistical Methods in Biology written by S.J. Welham and published by CRC Press. This book was released on 2014-08-22 with total page 606 pages. Available in PDF, EPUB and Kindle. Book excerpt: Written in simple language with relevant examples, Statistical Methods in Biology: Design and Analysis of Experiments and Regression is a practical and illustrative guide to the design of experiments and data analysis in the biological and agricultural sciences. The book presents statistical ideas in the context of biological and agricultural sciences to which they are being applied, drawing on relevant examples from the authors’ experience. Taking a practical and intuitive approach, the book only uses mathematical formulae to formalize the methods where necessary and appropriate. The text features extended discussions of examples that include real data sets arising from research. The authors analyze data in detail to illustrate the use of basic formulae for simple examples while using the GenStat® statistical package for more complex examples. Each chapter offers instructions on how to obtain the example analyses in GenStat and R. By the time you reach the end of the book (and online material) you will have gained: A clear appreciation of the importance of a statistical approach to the design of your experiments, A sound understanding of the statistical methods used to analyse data obtained from designed experiments and of the regression approaches used to construct simple models to describe the observed response as a function of explanatory variables, Sufficient knowledge of how to use one or more statistical packages to analyse data using the approaches described, and most importantly, An appreciation of how to interpret the results of these statistical analyses in the context of the biological or agricultural science within which you are working. The book concludes with a guide to practical design and data analysis. It gives you the understanding to better interact with consultant statisticians and to identify statistical approaches to add value to your scientific research.

Analyzing Ecological Data

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Publisher : Springer
ISBN 13 : 0387459723
Total Pages : 686 pages
Book Rating : 4.3/5 (874 download)

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Book Synopsis Analyzing Ecological Data by : Alain Zuur

Download or read book Analyzing Ecological Data written by Alain Zuur and published by Springer. This book was released on 2007-08-29 with total page 686 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides a practical introduction to analyzing ecological data using real data sets. The first part gives a largely non-mathematical introduction to data exploration, univariate methods (including GAM and mixed modeling techniques), multivariate analysis, time series analysis, and spatial statistics. The second part provides 17 case studies. The case studies include topics ranging from terrestrial ecology to marine biology and can be used as a template for a reader’s own data analysis. Data from all case studies are available from www.highstat.com. Guidance on software is provided in the book.

Statistical And Data Handling Skills in Biology

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Publisher : Pearson UK
ISBN 13 : 1292133112
Total Pages : 339 pages
Book Rating : 4.2/5 (921 download)

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Book Synopsis Statistical And Data Handling Skills in Biology by : Roland Ennos

Download or read book Statistical And Data Handling Skills in Biology written by Roland Ennos and published by Pearson UK. This book was released on 2018-01-17 with total page 339 pages. Available in PDF, EPUB and Kindle. Book excerpt: Is there a link between people’s heart rate and blood pressure? Does the lead in petrol fumes affect the growth of roadside plants? The ability to expertly analyse statistical data is a crucial skill in the biological sciences – it is fundamental to fully understanding what your experiments are actually telling you and so being able to answer your research questions. Statistical and Data Handling Skills in Biology gives you everything you need to understand and use statistical tests within your studies and future independent research. Written in a straight-forward and easy to understand style it presents all of the tests you will need throughout your studies, and shows you how to select the right tests to get the most out of your experiments. All of this is done in the context of biological examples so you can see just how relevant a skill this is, and how becoming fully proficient will make you a more rounded scientist. This 4th edition has been thoroughly updated throughout and now includes detailed coverage of the free statistical package R studio and a new chapter on how to write about and present statistics in papers, theses and reports. The first chapter has also been revised to introduce students to the need for and ideas behind statistical analysis. Features · Clear explanation with step by step detail of how to carry out a wide range of statistical analyses will help you to quickly gain understanding and confidence in this essential area. · Useful decision charts will help you to select the right statistical test and gain confidence in answering your research questions. · Real world examples in each chapter will help you to develop an applied understanding of the full range of statistical techniques · Self-assessment problems scenarios at the end of each chapter enable you to practice applying your understanding of a technique, thereby improving your confidence in using numbers. Guided answers allow you to check your understanding. Statistical and Data Handling Skills in Biology 4th edition is ideal for any biomedic or environmental scientist getting to grips with statistical analysis for use in class on as part of independent study.

Statistics for Environmental Biology and Toxicology

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Publisher : Routledge
ISBN 13 : 1351414143
Total Pages : 596 pages
Book Rating : 4.3/5 (514 download)

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Book Synopsis Statistics for Environmental Biology and Toxicology by : A. John Bailer

Download or read book Statistics for Environmental Biology and Toxicology written by A. John Bailer and published by Routledge. This book was released on 2020-04-03 with total page 596 pages. Available in PDF, EPUB and Kindle. Book excerpt: Statistics for Environmental Biology and Toxicology presents and illustrates statistical methods appropriate for the analysis of environmental data obtained in biological or toxicological experiments. Beginning with basic probability and statistical inferences, this text progresses through non-linear and generalized linear models, trend testing, time-to-event data and analysis of cross-classified tabular and categorical data. For the more complex analyses, extensive examples including SAS and S-PLUS programming code are provided to assist the reader when implementing the methods in practice.

Practical Statistics for Environmental and Biological Scientists

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Publisher : Wiley
ISBN 13 : 9780471496649
Total Pages : 286 pages
Book Rating : 4.4/5 (966 download)

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Book Synopsis Practical Statistics for Environmental and Biological Scientists by : John Townend

Download or read book Practical Statistics for Environmental and Biological Scientists written by John Townend and published by Wiley. This book was released on 2002-03-14 with total page 286 pages. Available in PDF, EPUB and Kindle. Book excerpt: All students and researchers in environmental and biological sciences require statistical methods at some stage of their work. Many have a preconception that statistics are difficult and unpleasant and find that the textbooks available are difficult to understand. Practical Statistics for Environmental and Biological Scientists provides a concise, user-friendly, non-technical introduction to statistics. The book covers planning and designing an experiment, how to analyse and present data, and the limitations and assumptions of each statistical method. The text does not refer to a specific computer package but descriptions of how to carry out the tests and interpret the results are based on the approaches used by most of the commonly used packages, e.g. Excel, MINITAB and SPSS. Formulae are kept to a minimum and relevant examples are included throughout the text.

Ecological Statistics

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Publisher : OUP Oxford
ISBN 13 : 0191652873
Total Pages : 407 pages
Book Rating : 4.1/5 (916 download)

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Book Synopsis Ecological Statistics by : Gordon A. Fox

Download or read book Ecological Statistics written by Gordon A. Fox and published by OUP Oxford. This book was released on 2015-01-30 with total page 407 pages. Available in PDF, EPUB and Kindle. Book excerpt: The application and interpretation of statistics are central to ecological study and practice. Ecologists are now asking more sophisticated questions than in the past. These new questions, together with the continued growth of computing power and the availability of new software, have created a new generation of statistical techniques. These have resulted in major recent developments in both our understanding and practice of ecological statistics. This novel book synthesizes a number of these changes, addressing key approaches and issues that tend to be overlooked in other books such as missing/censored data, correlation structure of data, heterogeneous data, and complex causal relationships. These issues characterize a large proportion of ecological data, but most ecologists' training in traditional statistics simply does not provide them with adequate preparation to handle the associated challenges. Uniquely, Ecological Statistics highlights the underlying links among many statistical approaches that attempt to tackle these issues. In particular, it gives readers an introduction to approaches to inference, likelihoods, generalized linear (mixed) models, spatially or phylogenetically-structured data, and data synthesis, with a strong emphasis on conceptual understanding and subsequent application to data analysis. Written by a team of practicing ecologists, mathematical explanations have been kept to the minimum necessary. This user-friendly textbook will be suitable for graduate students, researchers, and practitioners in the fields of ecology, evolution, environmental studies, and computational biology who are interested in updating their statistical tool kits. A companion web site provides example data sets and commented code in the R language.

Statistical Approaches for Hidden Variables in Ecology

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Publisher : John Wiley & Sons
ISBN 13 : 1119902789
Total Pages : 258 pages
Book Rating : 4.1/5 (199 download)

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Book Synopsis Statistical Approaches for Hidden Variables in Ecology by : Nathalie Peyrard

Download or read book Statistical Approaches for Hidden Variables in Ecology written by Nathalie Peyrard and published by John Wiley & Sons. This book was released on 2022-03-08 with total page 258 pages. Available in PDF, EPUB and Kindle. Book excerpt: The study of ecological systems is often impeded by components that escape perfect observation, such as the trajectories of moving animals or the status of plant seed banks. These hidden components can be efficiently handled with statistical modeling by using hidden variables, which are often called latent variables. Notably, the hidden variables framework enables us to model an underlying interaction structure between variables (including random effects in regression models) and perform data clustering, which are useful tools in the analysis of ecological data. This book provides an introduction to hidden variables in ecology, through recent works on statistical modeling as well as on estimation in models with latent variables. All models are illustrated with ecological examples involving different types of latent variables at different scales of organization, from individuals to ecosystems. Readers have access to the data and R codes to facilitate understanding of the model and to adapt inference tools to their own data.

Statistical Methods for Trend Detection and Analysis in the Environmental Sciences

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Publisher : John Wiley & Sons
ISBN 13 : 111999196X
Total Pages : 348 pages
Book Rating : 4.1/5 (199 download)

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Book Synopsis Statistical Methods for Trend Detection and Analysis in the Environmental Sciences by : Richard Chandler

Download or read book Statistical Methods for Trend Detection and Analysis in the Environmental Sciences written by Richard Chandler and published by John Wiley & Sons. This book was released on 2011-03-25 with total page 348 pages. Available in PDF, EPUB and Kindle. Book excerpt: The need to understand and quantify change is fundamental throughout the environmental sciences. This might involve describing past variation, understanding the mechanisms underlying observed changes, making projections of possible future change, or monitoring the effect of intervening in some environmental system. This book provides an overview of modern statistical techniques that may be relevant in problems of this nature. Practitioners studying environmental change will be familiar with many classical statistical procedures for the detection and estimation of trends. However, the ever increasing capacity to collect and process vast amounts of environmental information has led to growing awareness that such procedures are limited in the insights that they can deliver. At the same time, significant developments in statistical methodology have often been widely dispersed in the statistical literature and have therefore received limited exposure in the environmental science community. This book aims to provide a thorough but accessible review of these developments. It is split into two parts: the first provides an introduction to this area and the second part presents a collection of case studies illustrating the practical application of modern statistical approaches to the analysis of trends in real studies. Key Features: Presents a thorough introduction to the practical application and methodology of trend analysis in environmental science. Explores non-parametric estimation and testing as well as parametric techniques. Methods are illustrated using case studies from a variety of environmental application areas. Looks at trends in all aspects of a process including mean, percentiles and extremes. Supported by an accompanying website featuring datasets and R code. The book is designed to be accessible to readers with some basic statistical training, but also contains sufficient detail to serve as a reference for practising statisticians. It will therefore be of use to postgraduate students and researchers both in the environmental sciences and in statistics.

Minimum Divergence Methods in Statistical Machine Learning

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Publisher : Springer Nature
ISBN 13 : 4431569227
Total Pages : 224 pages
Book Rating : 4.4/5 (315 download)

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Book Synopsis Minimum Divergence Methods in Statistical Machine Learning by : Shinto Eguchi

Download or read book Minimum Divergence Methods in Statistical Machine Learning written by Shinto Eguchi and published by Springer Nature. This book was released on 2022-03-14 with total page 224 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book explores minimum divergence methods of statistical machine learning for estimation, regression, prediction, and so forth, in which we engage in information geometry to elucidate their intrinsic properties of the corresponding loss functions, learning algorithms, and statistical models. One of the most elementary examples is Gauss's least squares estimator in a linear regression model, in which the estimator is given by minimization of the sum of squares between a response vector and a vector of the linear subspace hulled by explanatory vectors. This is extended to Fisher's maximum likelihood estimator (MLE) for an exponential model, in which the estimator is provided by minimization of the Kullback-Leibler (KL) divergence between a data distribution and a parametric distribution of the exponential model in an empirical analogue. Thus, we envisage a geometric interpretation of such minimization procedures such that a right triangle is kept with Pythagorean identity in the sense of the KL divergence. This understanding sublimates a dualistic interplay between a statistical estimation and model, which requires dual geodesic paths, called m-geodesic and e-geodesic paths, in a framework of information geometry. We extend such a dualistic structure of the MLE and exponential model to that of the minimum divergence estimator and the maximum entropy model, which is applied to robust statistics, maximum entropy, density estimation, principal component analysis, independent component analysis, regression analysis, manifold learning, boosting algorithm, clustering, dynamic treatment regimes, and so forth. We consider a variety of information divergence measures typically including KL divergence to express departure from one probability distribution to another. An information divergence is decomposed into the cross-entropy and the (diagonal) entropy in which the entropy associates with a generative model as a family of maximum entropy distributions; the cross entropy associates with a statistical estimation method via minimization of the empirical analogue based on given data. Thus any statistical divergence includes an intrinsic object between the generative model and the estimation method. Typically, KL divergence leads to the exponential model and the maximum likelihood estimation. It is shown that any information divergence leads to a Riemannian metric and a pair of the linear connections in the framework of information geometry. We focus on a class of information divergence generated by an increasing and convex function U, called U-divergence. It is shown that any generator function U generates the U-entropy and U-divergence, in which there is a dualistic structure between the U-divergence method and the maximum U-entropy model. We observe that a specific choice of U leads to a robust statistical procedure via the minimum U-divergence method. If U is selected as an exponential function, then the corresponding U-entropy and U-divergence are reduced to the Boltzmann-Shanon entropy and the KL divergence; the minimum U-divergence estimator is equivalent to the MLE. For robust supervised learning to predict a class label we observe that the U-boosting algorithm performs well for contamination of mislabel examples if U is appropriately selected. We present such maximal U-entropy and minimum U-divergence methods, in particular, selecting a power function as U to provide flexible performance in statistical machine learning.

Statistical Methods and Applications in Forestry and Environmental Sciences

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Publisher : Springer
ISBN 13 : 9789811514784
Total Pages : 0 pages
Book Rating : 4.5/5 (147 download)

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Book Synopsis Statistical Methods and Applications in Forestry and Environmental Sciences by : Girish Chandra

Download or read book Statistical Methods and Applications in Forestry and Environmental Sciences written by Girish Chandra and published by Springer. This book was released on 2021-01-06 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents recent developments in statistical methodologies with particular relevance to applications in forestry and environmental sciences. It discusses important methodologies like ranked set sampling, adaptive cluster sampling, small area estimation, calibration approach-based estimators, design of experiments, multivariate techniques, Internet of Things, and ridge regression methods. It also covers the history of the implementation of statistical techniques in Indian forestry and the National Forest Inventory of India. The book is a valuable resource for applied statisticians, students, researchers, and practitioners in the forestry and environment sector. It includes real-world examples and case studies to help readers apply the techniques discussed. It also motivates academicians and researchers to use new technologies in the areas of forestry and environmental sciences with the help of software like R, MATLAB, Statistica, and Mathematica.

Multivariate Statistics for Wildlife and Ecology Research

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Publisher : Springer Science & Business Media
ISBN 13 : 146121288X
Total Pages : 293 pages
Book Rating : 4.4/5 (612 download)

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Book Synopsis Multivariate Statistics for Wildlife and Ecology Research by : Kevin McGarigal

Download or read book Multivariate Statistics for Wildlife and Ecology Research written by Kevin McGarigal and published by Springer Science & Business Media. This book was released on 2013-12-01 with total page 293 pages. Available in PDF, EPUB and Kindle. Book excerpt: With its focus on the practical application of the techniques of multivariate statistics, this book shapes the powerful tools of statistics for the specific needs of ecologists and makes statistics more applicable to their course of study. It gives readers a solid conceptual understanding of the role of multivariate statistics in ecological applications and the relationships among various techniques, while avoiding detailed mathematics and the underlying theory. More importantly, the reader will gain insight into the type of research questions best handled by each technique and the important considerations in applying them. Whether used as a textbook for specialised courses or as a supplement to general statistics texts, the book emphasises those techniques that students of ecology and natural resources most need to understand and employ in their research. While targeted for upper-division and graduate students in wildlife biology, forestry, and ecology, and for professional wildlife scientists and natural resource managers, this book will also be valuable to researchers in any of the biological sciences.

Statistical Methods for Research Workers

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Publisher :
ISBN 13 :
Total Pages : 376 pages
Book Rating : 4.:/5 (319 download)

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Book Synopsis Statistical Methods for Research Workers by : Sir Ronald Aylmer Fisher

Download or read book Statistical Methods for Research Workers written by Sir Ronald Aylmer Fisher and published by . This book was released on 1958 with total page 376 pages. Available in PDF, EPUB and Kindle. Book excerpt: