Reticulate Evolution and Humans

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Publisher : Oxford University Press
ISBN 13 : 0199539588
Total Pages : 246 pages
Book Rating : 4.1/5 (995 download)

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Book Synopsis Reticulate Evolution and Humans by : Michael L. Arnold

Download or read book Reticulate Evolution and Humans written by Michael L. Arnold and published by Oxford University Press. This book was released on 2009 with total page 246 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes the important role that the transfer of genes between organisms has played during the origin and evolution of humans, and the evolution of organisms on which the human species depends for shelter, sustenance and companionship.

Reticulate Evolution

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Author :
Publisher : Springer
ISBN 13 : 3319163450
Total Pages : 337 pages
Book Rating : 4.3/5 (191 download)

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Book Synopsis Reticulate Evolution by : Nathalie Gontier

Download or read book Reticulate Evolution written by Nathalie Gontier and published by Springer. This book was released on 2015-07-09 with total page 337 pages. Available in PDF, EPUB and Kindle. Book excerpt: Written for non-experts, this volume introduces the mechanisms that underlie reticulate evolution. Chapters are either accompanied with glossaries that explain new terminology or timelines that position pioneering scholars and their major discoveries in their historical contexts. The contributing authors outline the history and original context of discovery of symbiosis, symbiogenesis, lateral gene transfer, hybridization or divergence with gene flow and infectious heredity. By applying key insights from the areas of molecular (phylo)genetics, microbiology, virology, ecology, systematics, immunology, epidemiology and computational science, they demonstrate how reticulate evolution impacts successful survival, fitness and speciation. Reticulate evolution brings forth a challenge to the standard Neo-Darwinian framework, which defines life as the outcome of bifurcation and ramification patterns brought forth by the vertical mechanism of natural selection. Reticulate evolution puts forward a pattern in the tree of life that is characterized by horizontal mergings and lineage crossings induced by symbiosis, symbiogenesis, lateral gene transfer, hybridization or divergence with gene flow and infective heredity, making the “tree of life” look more like a “web of life.” On an epistemological level, the various means by which hereditary material can be transferred horizontally challenges our classic notions of units and levels of evolution, fitness, modes of transmission, linearity, communities and biological individuality. The case studies presented examine topics including the origin of the eukaryotic cell and its organelles through symbiogenesis; the origin of algae through primary and secondary symbiosis and dinoflagellates through tertiary symbiosis; the superorganism and holobiont as units of evolution; how endosymbiosis induces speciation in multicellular life forms; transferrable and non-transferrable plasmids and how they symbiotically interact with their host; the means by which pro- and eukaryotic organisms transfer genes laterally (bacterial transformation, transduction and conjugation as well as transposons and other mobile genetic elements); hybridization and divergence with gene flow in sexually-reproducing individuals; current (human) microbiome and viriome studies that impact our knowledge concerning the evolution of organismal health and acquired immunity; and how symbiosis and symbiogenesis can be modelled in computational evolution.

Reticulate Evolution and Humans

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Publisher :
ISBN 13 : 9780191716225
Total Pages : pages
Book Rating : 4.7/5 (162 download)

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Book Synopsis Reticulate Evolution and Humans by : Michael Lynn Arnold

Download or read book Reticulate Evolution and Humans written by Michael Lynn Arnold and published by . This book was released on 2009 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:

Reticulate Evolution in Gaudichaudia (Malpighiaceae).

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Publisher :
ISBN 13 :
Total Pages : 610 pages
Book Rating : 4.3/5 (91 download)

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Book Synopsis Reticulate Evolution in Gaudichaudia (Malpighiaceae). by : Steven Lee Jessup

Download or read book Reticulate Evolution in Gaudichaudia (Malpighiaceae). written by Steven Lee Jessup and published by . This book was released on 1994 with total page 610 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Bioinformatics

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Publisher : Elsevier
ISBN 13 : 9780080463704
Total Pages : 350 pages
Book Rating : 4.4/5 (637 download)

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Book Synopsis Bioinformatics by : Dilip K Arora

Download or read book Bioinformatics written by Dilip K Arora and published by Elsevier. This book was released on 2006-08-15 with total page 350 pages. Available in PDF, EPUB and Kindle. Book excerpt: The advances in genomic technologies, such as microarrays and high throughput sequencing, have expanded the realm of possibilities for capturing data and analyzing it using automated computer driven bioinformatics tools. With the completion of the sequencing of genomes of human and several model organisms, a quest for scientific discoveries being fueled by integrative and multidimensional techniques in mathematics and computational sciences. In this volume, leading researchers and experts have provided an overview of significant concepts from biological, mathematical, and computational perspectives. It provides a high level view of fungal genomic data integration and annotation, classification of proteins and identification of vaccine targets, identification of secretome or secreted proteins in fungal genomes, as well as tools for analyzing microarray expression profiles. Provides a survey of theoretical underpinnings on the technological tools and applications Discusses the tools utilized for the annotation of fungal genomes and addresses issues related to automated annotation generation in a high throughput biotechnology environment Describes the applications of the concepts and methodologies presented throughout the book

Corals in Space and Time

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Publisher : Cornell University Press
ISBN 13 : 9780801482632
Total Pages : 340 pages
Book Rating : 4.4/5 (826 download)

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Book Synopsis Corals in Space and Time by : John Edward Norwood Veron

Download or read book Corals in Space and Time written by John Edward Norwood Veron and published by Cornell University Press. This book was released on 1995 with total page 340 pages. Available in PDF, EPUB and Kindle. Book excerpt: As concerns about the change in global climate and the loss of biodiversity have mounted, attention has focused on the depletion of the ozone layer and the destruction of tropical rainforests. But recently scientists have identified another seriously endangered ecosystem: coral reefs. In Corals in Space and Time, J.E.N. Veron provides a richly detailed study of corals that will inform investigations of these fragile ecosystems. Drawing on twenty-five years of research, Veron brings together extensive field observations about the taxonomy, biogeography, paleontology, and biology of corals. After introducing coral taxonomy and biogeography, as well as relevant aspects of coral biology for the non-specialist, he provides an interpretation of the fossil record and paleoclimates, an analysis of modern coral distribution, and a discussion of the evolutionary nature and origins of coral species. Revealing a sharp conflict between empirical observations about the geographical variation within species, Veron introduces a non-Darwinian theory of coral evolution. He proposes that the evolution of coral species is driven not primarily by natural selection, but by constantly shifting patterns of ocean circulation, which produce changing variations of genetic connectivity. This mechanism of speciation and hybridization has far-reaching consequences for the study of all types of corals and potentially many other groups of organisms as well.

Reconstructing Evolution

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Publisher : OUP Oxford
ISBN 13 : 0191525987
Total Pages : 352 pages
Book Rating : 4.1/5 (915 download)

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Book Synopsis Reconstructing Evolution by : Olivier Gascuel

Download or read book Reconstructing Evolution written by Olivier Gascuel and published by OUP Oxford. This book was released on 2007-06-28 with total page 352 pages. Available in PDF, EPUB and Kindle. Book excerpt: Evolution is a complex process, acting at multiple scales, from DNA sequences and proteins to populations of species. Understanding and reconstructing evolution is of major importance in numerous subfields of biology. For example, phylogenetics and sequence evolution is central to comparative genomics, attempts to decipher genomes, and molecular epidemiology. Phylogenetics is also the focal point of large-scale international biodiversity assessment initiatives such as the 'Tree of Life' project, which aims to build the evolutionary tree for all extant species. Since the pioneering work in phylogenetics in the 1960s, models have become increasingly sophisticated to account for the inherent complexity of evolution. They rely heavily on mathematics and aim at modelling and analyzing biological phenomena such as horizontal gene transfer, heterogeneity of mutation, and speciation and extinction processes. This book presents these recent models, their biological relevance, their mathematical basis, their properties, and the algorithms to infer them from data. A number of subfields from mathematics and computer science are involved: combinatorics, graph theory, stringology, probabilistic and Markov models, information theory, statistical inference, Monte Carlo methods, continuous and discrete algorithmics. This book arises from the Mathematics of Evolution & Phylogenetics meeting at the Mathematical Institute Henri Poincaré, Paris, in June 2005 and is based on the outstanding state-of-the-art reports presented by the conference speakers. Ten chapters - based around five themes - provide a detailed overview of key topics, from the underlying concepts to the latest results, some of which are at the forefront of current research.

Coral Reefs: An Ecosystem in Transition

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Publisher : Springer Science & Business Media
ISBN 13 : 9400701144
Total Pages : 541 pages
Book Rating : 4.4/5 (7 download)

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Book Synopsis Coral Reefs: An Ecosystem in Transition by : Zvy Dubinsky

Download or read book Coral Reefs: An Ecosystem in Transition written by Zvy Dubinsky and published by Springer Science & Business Media. This book was released on 2010-12-02 with total page 541 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book covers in one volume materials scattered in hundreds of research articles, in most cases focusing on specialized aspects of coral biology. In addition to the latest developments in coral evolution and physiology, it presents chapters devoted to novel frontiers in coral reef research. These include the molecular biology of corals and their symbiotic algae, remote sensing of reef systems, ecology of coral disease spread, effects of various scenarios of global climate change, ocean acidification effects of increasing CO2 levels on coral calcification, and damaged coral reef remediation. Beyond extensive coverage of the above aspects, key issues regarding the coral organism and the reef ecosystem such as calcification, reproduction, modeling, algae, reef invertebrates, competition and fish are re-evaluated in the light of new research and emerging insights. In all chapters novel theories as well as challenges to established paradigms are introduced, evaluated and discussed. This volume is indispensible for all those involved in coral reef management and conservation.

The Routledge Handbook of Evolution and Philosophy

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Publisher : Routledge
ISBN 13 : 1317655567
Total Pages : 569 pages
Book Rating : 4.3/5 (176 download)

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Book Synopsis The Routledge Handbook of Evolution and Philosophy by : Richard Joyce

Download or read book The Routledge Handbook of Evolution and Philosophy written by Richard Joyce and published by Routledge. This book was released on 2017-08-16 with total page 569 pages. Available in PDF, EPUB and Kindle. Book excerpt: In recent years, the relation between contemporary academic philosophy and evolutionary theory has become ever more active, multifaceted, and productive. The connection is a bustling two-way street. In one direction, philosophers of biology make significant contributions to theoretical discussions about the nature of evolution (such as "What is a species?"; "What is reproductive fitness?"; "Does selection operate primarily on genes?"; and "What is an evolutionary function?"). In the other direction, a broader group of philosophers appeal to Darwinian selection in an attempt to illuminate traditional philosophical puzzles (such as "How could a brain-state have representational content?"; "Are moral judgments justified?"; "Why do we enjoy fiction?"; and "Are humans invariably selfish?"). In grappling with these questions, this interdisciplinary collection includes cutting-edge examples from both directions of traffic. The thirty contributions, written exclusively for this volume, are divided into six sections: The Nature of Selection; Evolution and Information; Human Nature; Evolution and Mind; Evolution and Ethics; and Evolution, Aesthetics, and Art. Many of the contributing philosophers and psychologists are international leaders in their fields.

Evolving Software Systems

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Publisher : Springer Science & Business Media
ISBN 13 : 3642453988
Total Pages : 404 pages
Book Rating : 4.6/5 (424 download)

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Book Synopsis Evolving Software Systems by : Tom Mens

Download or read book Evolving Software Systems written by Tom Mens and published by Springer Science & Business Media. This book was released on 2014-01-08 with total page 404 pages. Available in PDF, EPUB and Kindle. Book excerpt: During the last few years, software evolution research has explored new domains such as the study of socio-technical aspects and collaboration between different individuals contributing to a software system, the use of search-based techniques and meta-heuristics, the mining of unstructured software repositories, the evolution of software requirements, and the dynamic adaptation of software systems at runtime. Also more and more attention is being paid to the evolution of collections of inter-related and inter-dependent software projects, be it in the form of web systems, software product families, software ecosystems or systems of systems. With this book, the editors present insightful contributions on these and other domains currently being intensively explored, written by renowned researchers in the respective fields of software evolution. Each chapter presents the state of the art in a particular topic, as well as the current research, available tool support and remaining challenges. The book is complemented by a glossary of important terms used in the community, a reference list of nearly 1,000 papers and books and tips on additional resources that may be useful to the reader (reference books, journals, standards and major scientific events in the domain of software evolution and datasets). This book is intended for all those interested in software engineering, and more particularly, software maintenance and evolution. Researchers and software practitioners alike will find in the contributed chapters an overview of the most recent findings, covering a broad spectrum of software evolution topics. In addition, it can also serve as the basis of graduate or postgraduate courses on e.g., software evolution, requirements engineering, model-driven software development or social informatics.

Evolutionary Biology: Exobiology and Evolutionary Mechanisms

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Publisher : Springer Science & Business Media
ISBN 13 : 3642382126
Total Pages : 295 pages
Book Rating : 4.6/5 (423 download)

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Book Synopsis Evolutionary Biology: Exobiology and Evolutionary Mechanisms by : Pierre Pontarotti

Download or read book Evolutionary Biology: Exobiology and Evolutionary Mechanisms written by Pierre Pontarotti and published by Springer Science & Business Media. This book was released on 2013-07-03 with total page 295 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents 19 selected contributions to the 16th Evolutionary Biology Meeting, which took place in September 2012 in Marseilles. The aims of these annual meetings, which gather together leading evolutionary biologists and other scientists, are to promote the exchange of ideas and to encourage interdisciplinary collaborations. The first chapter deals with the history of a great discovery: The first experiments on ascidian and sea urchin egg fertilization. The remaining contributions are grouped under the following categories: · Evolutionary biology concepts · Exobiology and the origin of life · Evolutionary mechanisms Offering an up-to-date overview of recent findings in the field of evolutionary biology, this book is an invaluable source of information for scientists, teachers and advanced students.

Understanding plant diversity and evolution in the mediterranean basin

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Publisher : Frontiers Media SA
ISBN 13 : 2832521967
Total Pages : 285 pages
Book Rating : 4.8/5 (325 download)

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Book Synopsis Understanding plant diversity and evolution in the mediterranean basin by : Nico Cellinese

Download or read book Understanding plant diversity and evolution in the mediterranean basin written by Nico Cellinese and published by Frontiers Media SA. This book was released on 2023-04-28 with total page 285 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Integrated Molecular Evolution

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Publisher : CRC Press
ISBN 13 : 1482230909
Total Pages : 574 pages
Book Rating : 4.4/5 (822 download)

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Book Synopsis Integrated Molecular Evolution by : Scott Orland Rogers

Download or read book Integrated Molecular Evolution written by Scott Orland Rogers and published by CRC Press. This book was released on 2016-06-08 with total page 574 pages. Available in PDF, EPUB and Kindle. Book excerpt: Evolutionary biology has increasingly relied upon tools developed in molecular biology that allow for the structure and function of macromolecules to be used as data for exploring the patterns and processes of evolutionary change. Integrated Molecular Evolution, Second Edition is a textbook intended to expansively and comprehensive review evolutionary studies now routinely using molecular data. This new edition has been thoroughly updated and expanded, and provides a basic summary of evolutionary biology as well as a review of current phylogenetics and phylogenomics. Reflecting a burgeoning pedagogical landscape, this new edition includes nearly double the number of chapters, including a new section on molecular and bioinformatic methods. Dedicated chapters were added on: Evolution of the genetic code Mendelian genetics and population genetics Natural selection Horizontal gene transfers Animal development and plant development Cancer Extraction of biological molecules Analytical methods Sequencing methods and sequencing analyses Omics Phylogenetics and phylogenetic networks Protein trafficking Human genomics More than 400 illustrations appear in this edition, doubling the number included in the first edition, and over 100 of these diagrams are now in color. The second edition combines and integrates extensive summaries of genetics and evolutionary biology in a manner that is accessible for students at either the graduate or undergraduate level. It also provides both the basic foundations of molecular evolution, such as the structure and function of DNA, RNA and proteins, as well as more advanced chapters reviewing analytical techniques for obtaining sequences, and interpreting and archiving molecular and genomic data.

The Theory of Evolution

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Publisher : University of Chicago Press
ISBN 13 : 022667133X
Total Pages : 455 pages
Book Rating : 4.2/5 (266 download)

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Book Synopsis The Theory of Evolution by : Samuel M. Scheiner

Download or read book The Theory of Evolution written by Samuel M. Scheiner and published by University of Chicago Press. This book was released on 2020-04-03 with total page 455 pages. Available in PDF, EPUB and Kindle. Book excerpt: Darwin’s nineteenth-century writings laid the foundations for modern studies of evolution, and theoretical developments in the mid-twentieth century fostered the Modern Synthesis. Since that time, a great deal of new biological knowledge has been generated, including details of the genetic code, lateral gene transfer, and developmental constraints. Our improved understanding of these and many other phenomena have been working their way into evolutionary theory, changing it and improving its correspondence with evolution in nature. And while the study of evolution is thriving both as a basic science to understand the world and in its applications in agriculture, medicine, and public health, the broad scope of evolution—operating across genes, whole organisms, clades, and ecosystems—presents a significant challenge for researchers seeking to integrate abundant new data and content into a general theory of evolution. This book gives us that framework and synthesis for the twenty-first century. The Theory of Evolution presents a series of chapters by experts seeking this integration by addressing the current state of affairs across numerous fields within evolutionary biology, ranging from biogeography to multilevel selection, speciation, and macroevolutionary theory. By presenting current syntheses of evolution’s theoretical foundations and their growth in light of new datasets and analyses, this collection will enhance future research and understanding.

The Adaptive Seascape

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Publisher : U of Minnesota Press
ISBN 13 : 9780816623488
Total Pages : 284 pages
Book Rating : 4.6/5 (234 download)

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Book Synopsis The Adaptive Seascape by : David J. Merrell

Download or read book The Adaptive Seascape written by David J. Merrell and published by U of Minnesota Press. This book was released on 1994 with total page 284 pages. Available in PDF, EPUB and Kindle. Book excerpt: Based on observational and experimental data, in natural populations of plants and animals studied in the field and in the laboratory, this perspective unravels the hidden and often poorly founded assumptions underlying some of the more troublesome controversies in evolutionary biology today

Problem Solving Handbook in Computational Biology and Bioinformatics

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Publisher : Springer Science & Business Media
ISBN 13 : 0387097600
Total Pages : 347 pages
Book Rating : 4.3/5 (87 download)

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Book Synopsis Problem Solving Handbook in Computational Biology and Bioinformatics by : Lenwood S. Heath

Download or read book Problem Solving Handbook in Computational Biology and Bioinformatics written by Lenwood S. Heath and published by Springer Science & Business Media. This book was released on 2010-10-20 with total page 347 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bioinformatics is growing by leaps and bounds; theories/algorithms/statistical techniques are constantly evolving. Nevertheless, a core body of algorithmic ideas have emerged and researchers are beginning to adopt a "problem solving" approach to bioinformatics, wherein they use solutions to well-abstracted problems as building blocks to solve larger scope problems. Problem Solving Handbook for Computational Biology and Bioinformatics is an edited volume contributed by world renowned leaders in this field. This comprehensive handbook with problem solving emphasis, covers all relevant areas of computational biology and bioinformatics. Web resources and related themes are highlighted at every opportunity in this central easy-to-read reference. Designed for advanced-level students, researchers and professors in computer science and bioengineering as a reference or secondary text, this handbook is also suitable for professionals working in this industry.

Reconstructing the Tree of Life

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Publisher : CRC Press
ISBN 13 : 1420009532
Total Pages : 368 pages
Book Rating : 4.4/5 (2 download)

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Book Synopsis Reconstructing the Tree of Life by : Trevor R. Hodkinson

Download or read book Reconstructing the Tree of Life written by Trevor R. Hodkinson and published by CRC Press. This book was released on 2006-12-26 with total page 368 pages. Available in PDF, EPUB and Kindle. Book excerpt: To document the world’s diversity of species and reconstruct the tree of life we need to undertake some simple but mountainous tasks. Most importantly, we need to tackle species rich groups. We need to collect, name, and classify them, and then position them on the tree of life. We need to do this systematically across all groups of organisms and because of the biodiversity crisis we need to do it quickly. With contributions from key systematic and taxonomic researchers, Reconstructing the Tree of Life: Taxonomy and Systematics of Species Rich Taxa outlines the core of the problem and explores strategies that bring us closer to its solution. The editors split the book into three parts: introduction and general concepts, reconstructing and using the tree of life, and taxonomy and systematics of species rich groups (case studies). They introduce, with examples, the concept of species rich groups and discuss their importance in reconstructing the tree of life as well as their conservation and sustainable utilization in general. The book highlights how phylogenetic trees are becoming “supersized” to handle species rich groups and the methods that are being developed to deal with the computational complexity of such trees. It discusses factors that have lead some groups to speciate to a staggering degree and also provides case studies that highlight the problems and prospects of dealing with species rich groups in taxonomy. To understand species rich taxa, evolution has set scientists a difficult, but not unattainable, challenge that requires the meshing together of phylogenetics and taxonomy, considerable advances in informatics, improved and increased collecting, training of taxonomists, and significant financial support. This book provides the tools and methods needed to meet that challenge.