Phylogenetic Diversity

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Phylogenetic Diversity

Author : Rosa A. Scherson
Publisher : Springer
ISBN 13 : 3319931458
Total Pages : 223 pages
Book Rating : 4.3/5 (199 download)

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Book Synopsis Phylogenetic Diversity by : Rosa A. Scherson

Download or read book Phylogenetic Diversity written by Rosa A. Scherson and published by Springer. This book was released on 2018-08-31 with total page 223 pages. Available in PDF, EPUB and Kindle. Book excerpt: “Biodiversity” refers to the variety of life. It is now agreed that there is a “biodiversity crisis”, corresponding to extinction rates of species that may be 1000 times what is thought to be “normal”. Biodiversity science has a higher profile than ever, with the new Intergovernmental Science-Policy Platform on Biodiversity and Ecosystem Services involving more than 120 countries and 1000s of scientists. At the same time, the discipline is re-evaluating its foundations – including its philosophy and even core definitions. The value of biodiversity is being debated. In this context, the tree of life (“phylogeny”) is emerging as an important way to look at biodiversity, with relevance cutting across current areas of concern – from the question of resilience within ecosystems, to conservation priorities for globally threatened species – while capturing the values of biodiversity that have been hard to quantify, including resilience and maintaining options for future generations. This increased appreciation of the importance of conserving “phylogenetic diversity”, from microbial communities in the human gut to global threatened species, has inevitably resulted in an explosion of new indices, methods, and case studies. This book recognizes and responds to the timely opportunity for synthesis and sharing experiences in practical applications. The book recognizes that the challenge of finding a synthesis, and building shared concepts and a shared toolbox, requires both an appreciation of the past and a look into the future. Thus, the book is organized as a flow from history, concepts and philosophy, through to methods and tools, and followed by selected case studies. A positive vision and plan of action emerges from these chapters, that includes coping with inevitable uncertainties, effectively communicating the importance of this “evolutionary heritage” to the public and to policy-makers, and ultimately contributing to biodiversity conservation policy from local to global scales.

Biodiversity Conservation and Phylogenetic Systematics

Author : Roseli Pellens
Publisher : Springer
ISBN 13 : 3319224611
Total Pages : 396 pages
Book Rating : 4.3/5 (192 download)

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Book Synopsis Biodiversity Conservation and Phylogenetic Systematics by : Roseli Pellens

Download or read book Biodiversity Conservation and Phylogenetic Systematics written by Roseli Pellens and published by Springer. This book was released on 2016-02-24 with total page 396 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is about phylogenetic diversity as an approach to reduce biodiversity losses in this period of mass extinction. Chapters in the first section deal with questions such as the way we value phylogenetic diversity among other criteria for biodiversity conservation; the choice of measures; the loss of phylogenetic diversity with extinction; the importance of organisms that are deeply branched in the tree of life, and the role of relict species. The second section is composed by contributions exploring methodological aspects, such as how to deal with abundance, sampling effort, or conflicting trees in analysis of phylogenetic diversity. The last section is devoted to applications, showing how phylogenetic diversity can be integrated in systematic conservation planning, in EDGE and HEDGE evaluations. This wide coverage makes the book a reference for academics, policy makers and stakeholders dealing with biodiversity conservation.

Functional and Phylogenetic Ecology in R

Author : Nathan G. Swenson
Publisher : Springer Science & Business Media
ISBN 13 : 1461495423
Total Pages : 217 pages
Book Rating : 4.4/5 (614 download)

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Book Synopsis Functional and Phylogenetic Ecology in R by : Nathan G. Swenson

Download or read book Functional and Phylogenetic Ecology in R written by Nathan G. Swenson and published by Springer Science & Business Media. This book was released on 2014-03-26 with total page 217 pages. Available in PDF, EPUB and Kindle. Book excerpt: Functional and Phylogenetic Ecology in R is designed to teach readers to use R for phylogenetic and functional trait analyses. Over the past decade, a dizzying array of tools and methods were generated to incorporate phylogenetic and functional information into traditional ecological analyses. Increasingly these tools are implemented in R, thus greatly expanding their impact. Researchers getting started in R can use this volume as a step-by-step entryway into phylogenetic and functional analyses for ecology in R. More advanced users will be able to use this volume as a quick reference to understand particular analyses. The volume begins with an introduction to the R environment and handling relevant data in R. Chapters then cover phylogenetic and functional metrics of biodiversity; null modeling and randomizations for phylogenetic and functional trait analyses; integrating phylogenetic and functional trait information; and interfacing the R environment with a popular C-based program. This book presents a unique approach through its focus on ecological analyses and not macroevolutionary analyses. The author provides his own code, so that the reader is guided through the computational steps to calculate the desired metrics. This guided approach simplifies the work of determining which package to use for any given analysis. Example datasets are shared to help readers practice, and readers can then quickly turn to their own datasets.

Phylogenetic Ecology

Author : Nathan G. Swenson
Publisher : University of Chicago Press
ISBN 13 : 022667150X
Total Pages : 229 pages
Book Rating : 4.2/5 (266 download)

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Book Synopsis Phylogenetic Ecology by : Nathan G. Swenson

Download or read book Phylogenetic Ecology written by Nathan G. Swenson and published by University of Chicago Press. This book was released on 2019-11-20 with total page 229 pages. Available in PDF, EPUB and Kindle. Book excerpt: Over the past decade, ecologists have increasingly embraced phylogenetics, the study of evolutionary relationships among species. As a result, they have come to discover the field’s power to illuminate present ecological patterns and processes. Ecologists are now investigating whether phylogenetic diversity is a better measure of ecosystem health than more traditional metrics like species diversity, whether it can predict the future structure and function of communities and ecosystems, and whether conservationists might prioritize it when formulating conservation plans. In Phylogenetic Ecology, Nathan G. Swenson synthesizes this nascent field’s major conceptual, methodological, and empirical developments to provide students and practicing ecologists with a foundational overview. Along the way, he highlights those realms of phylogenetic ecology that will likely increase in relevance—such as the burgeoning subfield of phylogenomics—and shows how ecologists might lean on these new perspectives to inform their research programs.

The Evolution of Cultural Diversity

Author : Ruth Mace
Publisher : Routledge
ISBN 13 : 1315418592
Total Pages : 334 pages
Book Rating : 4.3/5 (154 download)

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Book Synopsis The Evolution of Cultural Diversity by : Ruth Mace

Download or read book The Evolution of Cultural Diversity written by Ruth Mace and published by Routledge. This book was released on 2016-09-16 with total page 334 pages. Available in PDF, EPUB and Kindle. Book excerpt: Virtually all aspects of human behavior show enormous variation both within and between cultural groups, including material culture, social organization and language. Thousands of distinct cultural groups exist: about 6,000 languages are spoken today, and it is thought that a far greater number of languages existed in the past but became extinct. Using a Darwinian approach, this book seeks to explain this rich cultural variation. There are a number of theoretical reasons to believe that cultural diversification might be tree-like, that is phylogenetic: material and non-material culture is clearly inherited by descendants, there is descent with modification, and languages appear to be hierarchically related. There are also a number of theoretical reasons to believe that cultural evolution is not tree-like: cultural inheritance is not Mendelian and can indeed be vertical, horizontal or oblique, evidence of borrowing abounds, cultures are not necessarily biological populations and can be transient and complex. Here, for the first time, this title tackles these questions of cultural evolution empirically and quantitatively, using a range of case studies from Africa, the Pacific, Europe, Asia and America. A range of powerful theoretical tools developed in evolutionary biology is used to test detailed hypotheses about historical patterns and adaptive functions in cultural evolution. Evidence is amassed from archaeological, linguist and cultural datasets, from both recent and historical or pre-historical time periods. A unifying theme is that the phylogenetic approach is a useful and powerful framework, both for describing the evolutionary history of these traits, and also for testing adaptive hypotheses about their evolution and co-evolution. Contributors include archaeologists, anthropologists, evolutionary biologists and linguists, and this book will be of great interest to all those involved in these areas.

Parasite Diversity and Diversification

Author : Serge Morand
Publisher : Cambridge University Press
ISBN 13 : 1107037654
Total Pages : 503 pages
Book Rating : 4.1/5 (7 download)

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Book Synopsis Parasite Diversity and Diversification by : Serge Morand

Download or read book Parasite Diversity and Diversification written by Serge Morand and published by Cambridge University Press. This book was released on 2015-02-26 with total page 503 pages. Available in PDF, EPUB and Kindle. Book excerpt: By joining phylogenetics and evolutionary ecology, this book explores the patterns of parasite diversity while revealing diversification processes.

Phylogeny and Conservation

Author : Andy Purvis
Publisher : Cambridge University Press
ISBN 13 : 9780521825023
Total Pages : 456 pages
Book Rating : 4.8/5 (25 download)

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Book Synopsis Phylogeny and Conservation by : Andy Purvis

Download or read book Phylogeny and Conservation written by Andy Purvis and published by Cambridge University Press. This book was released on 2005-09-22 with total page 456 pages. Available in PDF, EPUB and Kindle. Book excerpt: Phylogeny is a potentially powerful tool for conserving biodiversity. This book explores how it can be used to tackle questions of great practical importance and urgency for conservation. Using case studies from many different taxa and regions of the world, the volume evaluates how useful phylogeny is in understanding the processes that have generated today's diversity and the processes that now threaten it. The urgency with which conservation decisions have to be made as well as the need for the best possible decisions make this volume of great value to researchers, practitioners and policy-makers.

Plant Diversity Patterns and Drivers

Author : Qing Zhang
Publisher : Frontiers Media SA
ISBN 13 : 2832553923
Total Pages : 426 pages
Book Rating : 4.8/5 (325 download)

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Book Synopsis Plant Diversity Patterns and Drivers by : Qing Zhang

Download or read book Plant Diversity Patterns and Drivers written by Qing Zhang and published by Frontiers Media SA. This book was released on 2024-09-20 with total page 426 pages. Available in PDF, EPUB and Kindle. Book excerpt: Biodiversity can provide a series of important ecosystem functions and ecosystem services, which meet the needs of human beings. Plants are the biological group with the highest carbon content on earth, their diversity has attracted increased attention. The interpretation of plant diversity patterns and drivers is crucial for the conservation and utilization of plant resources and is also one of the hot topics in plant science and ecology. There are already many studies on the patterns and drivers of plant diversity, including different diversity dimensions (e.g., taxonomic, phylogenetic, and functional diversity) and spatial scales (different plots/sites, watershed, country, continent, and globe). The mechanisms underlying plant diversity patterns are also quite complex. For example, many hypotheses are related to contemporary climate and soil conditions, with temperature, precipitation, and soil nutrient being the most discussed drivers. In addition, paleoclimate and geological events may also have a strong legacy on current plant diversity patterns. Except for these natural factors, many anthropogenic activities, including agriculture, deforestation, grazing, urbanization, and coal mining, are also important drivers of plant diversity. These anthropogenic activities can affect plant diversity patterns not only directly, but also indirectly through their effects on habitat loss and habitat fragmentation. Therefore, the current plant diversity patterns are the result of many interacting factors and need to be interpreted from a more comprehensive perspective. This Research Topic will therefore provide a platform for sufficient communication, aiming to integrate the research from different fields and deepen the understanding of the patterns and drivers of plant diversity. We encourage the submission of theoretical and experimental studies on different plant groups, such as seed plants, ferns, mosses, and algae. Studies based on new methods and technology (such as genomics and drones) are also welcomed. We welcome the following specific topics: • Effects of historical factors (such as paleoclimate, geological events) on plant diversity; • Plant diversity that driven by contemporary climate and anthropogenic activities; • The effect of habitat loss and fragmentation on plant diversity; • New methods of research on the patterns and drivers of plant diversity.

Biological Diversity

Author : Anne E. Magurran
Publisher : Oxford University Press
ISBN 13 : 0199580669
Total Pages : 364 pages
Book Rating : 4.1/5 (995 download)

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Book Synopsis Biological Diversity by : Anne E. Magurran

Download or read book Biological Diversity written by Anne E. Magurran and published by Oxford University Press. This book was released on 2011 with total page 364 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides an up to date review of the methods of measuring and assessing biological diversity, together with their application.

Phylogeny

Author : Mike Steel
Publisher : SIAM
ISBN 13 : 161197447X
Total Pages : 302 pages
Book Rating : 4.6/5 (119 download)

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Book Synopsis Phylogeny by : Mike Steel

Download or read book Phylogeny written by Mike Steel and published by SIAM. This book was released on 2016-09-29 with total page 302 pages. Available in PDF, EPUB and Kindle. Book excerpt: Phylogenetics is a topical and growing area of research. Phylogenies (phylogenetic trees and networks) allow biologists to study and graph evolutionary relationships between different species. These are also used to investigate other evolutionary processes?for example, how languages developed or how different strains of a virus (such as HIV or influenza) are related to each other. This self-contained book addresses the underlying mathematical theory behind the reconstruction and analysis of phylogenies. The theory is grounded in classical concepts from discrete mathematics and probability theory as well as techniques from other branches of mathematics (algebra, topology, differential equations). The biological relevance of the results is highlighted throughout. The author supplies proofs of key classical theorems and includes results not covered in existing books, emphasizes relevant mathematical results derived over the past 20 years, and provides numerous exercises, examples, and figures.

Conservation of Ecological Processes

Author : Robert E. Ricklefs
Publisher :
ISBN 13 :
Total Pages : 20 pages
Book Rating : 4.:/5 (89 download)

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Book Synopsis Conservation of Ecological Processes by : Robert E. Ricklefs

Download or read book Conservation of Ecological Processes written by Robert E. Ricklefs and published by . This book was released on 1984 with total page 20 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Phylogenies in Ecology

Author : Marc W. Cadotte
Publisher : Princeton University Press
ISBN 13 : 0691157685
Total Pages : 264 pages
Book Rating : 4.6/5 (911 download)

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Book Synopsis Phylogenies in Ecology by : Marc W. Cadotte

Download or read book Phylogenies in Ecology written by Marc W. Cadotte and published by Princeton University Press. This book was released on 2016-08-09 with total page 264 pages. Available in PDF, EPUB and Kindle. Book excerpt: Phylogenies in Ecology is the first book to critically review the application of phylogenetic methods in ecology, and it serves as a primer to working ecologists and students of ecology wishing to understand these methods. This book demonstrates how phylogenetic information is transforming ecology by offering fresh ways to estimate the similarities and differences among species, and by providing deeper, evolutionary-based insights on species distributions, coexistence, and niche partitioning. Marc Cadotte and Jonathan Davies examine this emerging area's explosive growth, allowing for this new body of hypotheses testing. Cadotte and Davies systematically look at all the main areas of current ecophylogenetic methodology, testing, and inference. Each chapter of their book covers a unique topic, emphasizes key assumptions, and introduces the appropriate statistical methods and null models required for testing phylogenetically informed hypotheses. The applications presented throughout are supported and connected by examples relying on real-world data that have been analyzed using the open-source programming language, R. Showing how phylogenetic methods are shedding light on fundamental ecological questions related to species coexistence, conservation, and global change, Phylogenies in Ecology will interest anyone who thinks that evolution might be important in their data.

Handbook of Trait-Based Ecology

Author : Francesco de Bello
Publisher : Cambridge University Press
ISBN 13 : 1108472915
Total Pages : 311 pages
Book Rating : 4.1/5 (84 download)

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Book Synopsis Handbook of Trait-Based Ecology by : Francesco de Bello

Download or read book Handbook of Trait-Based Ecology written by Francesco de Bello and published by Cambridge University Press. This book was released on 2021-03-11 with total page 311 pages. Available in PDF, EPUB and Kindle. Book excerpt: Trait-based ecology is rapidly expanding. This comprehensive and accessible guide covers the main concepts and tools in functional ecology.

Urban Ecology

Author : John Marzluff
Publisher : Springer Science & Business Media
ISBN 13 : 0387734120
Total Pages : 802 pages
Book Rating : 4.3/5 (877 download)

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Book Synopsis Urban Ecology by : John Marzluff

Download or read book Urban Ecology written by John Marzluff and published by Springer Science & Business Media. This book was released on 2008-01-03 with total page 802 pages. Available in PDF, EPUB and Kindle. Book excerpt: Urban Ecology is a rapidly growing field of academic and practical significance. Urban ecologists have published several conference proceedings and regularly contribute to the ecological, architectural, planning, and geography literature. However, important papers in the field that set the foundation for the discipline and illustrate modern approaches from a variety of perspectives and regions of the world have not been collected in a single, accessible book. Foundations of Urban Ecology does this by reprinting important European and American publications, filling gaps in the published literature with a few, targeted original works, and translating key works originally published in German. This edited volume will provide students and professionals with a rich background in all facets of urban ecology. The editors emphasize the drivers, patterns, processes and effects of human settlement. The papers they synthesize provide readers with a broad understanding of the local and global aspects of settlement through traditional natural and social science lenses. This interdisciplinary vision gives the reader a comprehensive view of the urban ecosystem by introducing drivers, patterns, processes and effects of human settlements and the relationships between humans and other animals, plants, ecosystem processes, and abiotic conditions. The reader learns how human institutions, health, and preferences influence, and are influenced by, the others members of their shared urban ecosystem.

What Is Biodiversity?

Author : James Maclaurin
Publisher : University of Chicago Press
ISBN 13 : 0226500829
Total Pages : 231 pages
Book Rating : 4.2/5 (265 download)

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Book Synopsis What Is Biodiversity? by : James Maclaurin

Download or read book What Is Biodiversity? written by James Maclaurin and published by University of Chicago Press. This book was released on 2008-11-15 with total page 231 pages. Available in PDF, EPUB and Kindle. Book excerpt: In the life sciences, there is wide-ranging debate about biodiversity. While nearly everyone is in favor of biodiversity and its conservation, methods for its assessment vary enormously. So what exactly is biodiversity? Most theoretical work on the subject assumes it has something to do with species richness—with the number of species in a particular region—but in reality, it is much more than that. Arguing that we cannot make rational decisions about what it is to be protected without knowing what biodiversity is, James Maclaurin and Kim Sterelny offer in What Is Biodiversity? a theoretical and conceptual exploration of the biological world and how diversity is valued. Here, Maclaurin and Sterelny explore not only the origins of the concept of biodiversity, but also how that concept has been shaped by ecology and more recently by conservation biology. They explain the different types of biodiversity important in evolutionary theory, developmental biology, ecology, morphology and taxonomy and conclude that biological heritage is rich in not just one biodiversity but many. Maclaurin and Sterelny also explore the case for the conservation of these biodiversities using option value theory, a tool borrowed from economics. An erudite, provocative, timely, and creative attempt to answer a fundamental question, What Is Biodiversity? will become a foundational text in the life sciences and studies thereof.

Ecology and Conservation of Birds in Urban Environments

Author : Enrique Murgui
Publisher : Springer
ISBN 13 : 3319433148
Total Pages : 520 pages
Book Rating : 4.3/5 (194 download)

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Book Synopsis Ecology and Conservation of Birds in Urban Environments by : Enrique Murgui

Download or read book Ecology and Conservation of Birds in Urban Environments written by Enrique Murgui and published by Springer. This book was released on 2017-02-10 with total page 520 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides syntheses of ecological theories and overarching patterns of urban bird ecology that have only recently become available. The numerous habitats represented in this book ranges from rows of trees in wooded alleys, to wastelands and remnants of natural habitats encapsulated in the urban matrix. Authored by leading scientists in this emergent field, the chapters explore how the characteristics of the habitat in urban environments influence bird communities and populations at multiple levels of ecological organization and at different spatial and temporal scales, and how this information should be incorporated in urban planning to achieve an effective conservation of bird fauna in urban environments. Birds are among the most conspicuous and fascinating residents of urban neighborhoods and provide urban citizens with everyday wildlife contact all over the world. However, present urbanization trends are rapidly depleting their habitats, and thus knowledge of urban bird ecology is urgently needed if birds are to thrive in cities. The book is unique in its inclusion of examples from all continents (except Antarctica) in an effort to arrive at a more holistic perspective. Among other issues, the individual chapters address the censusing of birds in urban green spaces; the relationship between bird communities and the structure of urban green spaces; the role of exotic plant species as food sources for urban bird fauna; the influence of artificial light and pollutants on bird fauna; trends in long-term urban bird research, and transdisciplinary studies on bird sounds and their effects on humans. Several chapters investigate how our current knowledge of the ecology of urban bird fauna should be applied in order to achieve better management of urban habitats so as to achieve conservation of species or even increase species diversity. The book also provides a forward-looking summary on potential research directions. As such, it provides a valuable resource for urban ecologists, urban ecology students, landscape architects, city planners, decision makers and anyone with an interest in urban ornithology and bird conservation. Moreover, it provides a comprehensive overview for researchers in the fields of ecology and conservation of urban bird fauna.

Analysis of Phylogenetics and Evolution with R

Author : Emmanuel Paradis
Publisher : Springer Science & Business Media
ISBN 13 : 0387351000
Total Pages : 221 pages
Book Rating : 4.3/5 (873 download)

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Book Synopsis Analysis of Phylogenetics and Evolution with R by : Emmanuel Paradis

Download or read book Analysis of Phylogenetics and Evolution with R written by Emmanuel Paradis and published by Springer Science & Business Media. This book was released on 2006-11-25 with total page 221 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book integrates a wide variety of data analysis methods into a single and flexible interface: the R language. The book starts with a presentation of different R packages and gives a short introduction to R for phylogeneticists unfamiliar with this language. The basic phylogenetic topics are covered. The chapter on tree drawing uses R's powerful graphical environment. A section deals with the analysis of diversification with phylogenies, one of the author's favorite research topics. The last chapter is devoted to the development of phylogenetic methods with R and interfaces with other languages (C and C++). Some exercises conclude these chapters.