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Author : Wiens Jj
Publisher : Smithsonian
ISBN 13 : 9781560988168
Total Pages : 220 pages
Book Rating : 4.9/5 (881 download)
Download or read book PHYLOGENETIC ANALYSIS MORPH PB written by Wiens Jj and published by Smithsonian. This book was released on 2000-06-17 with total page 220 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Author : Pablo A. Goloboff
Publisher : CRC Press
ISBN 13 : 1000550060
Total Pages : 289 pages
Book Rating : 4.0/5 (5 download)
Download or read book From Observations to Optimal Phylogenetic Trees written by Pablo A. Goloboff and published by CRC Press. This book was released on 2022-07-22 with total page 289 pages. Available in PDF, EPUB and Kindle. Book excerpt: Taxonomists specializing in different groups once based phylogenetic analysis only on morphological data; molecular data was used more rarely. Although molecular systematics is routine today, the use of morphological data continues to be important, especially for phylogenetic placement of many taxa known only from fossils and rare or difficult to collect species. In addition, morphological analyses help identify potential biases in molecular analyses. And finally, scenarios with respect to morphology continue to motivate biologists: the beauty of a cheetah or a baobab does not lie in their DNA sequence, but instead on what they are and do! This book is an up-to-date revision of methods and principles of phylogenetic analysis of morphological data. It is also a general guide for using the computer program TNT in the analysis of such data. The book covers the main aspects of phylogenetic analysis and general methods to compare classifications derived from molecules and morphology. The basic aspects of molecular analysis are covered only as needed to highlight the differences with methods and assumptions for analysis of morphological datasets.
Author : David Sepkoski
Publisher : University of Chicago Press
ISBN 13 : 022627571X
Total Pages : 581 pages
Book Rating : 4.2/5 (262 download)
Download or read book The Paleobiological Revolution written by David Sepkoski and published by University of Chicago Press. This book was released on 2015-03-04 with total page 581 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Paleobiological Revolution chronicles the incredible ascendance of the once-maligned science of paleontology to the vanguard of a field. With the establishment of the modern synthesis in the 1940s and the pioneering work of George Gaylord Simpson, Ernst Mayr, and Theodosius Dobzhansky, as well as the subsequent efforts of Stephen Jay Gould, David Raup, and James Valentine, paleontology became embedded in biology and emerged as paleobiology, a first-rate discipline central to evolutionary studies. Pairing contributions from some of the leading actors of the transformation with overviews from historians and philosophers of science, the essays here capture the excitement of the seismic changes in the discipline. In so doing, David Sepkoski and Michael Ruse harness the energy of the past to call for further study of the conceptual development of modern paleobiology.
Author : Marco Salemi
Publisher : Cambridge University Press
ISBN 13 : 0521877105
Total Pages : 750 pages
Book Rating : 4.5/5 (218 download)
Download or read book The Phylogenetic Handbook written by Marco Salemi and published by Cambridge University Press. This book was released on 2009-03-26 with total page 750 pages. Available in PDF, EPUB and Kindle. Book excerpt: A broad, hands on guide with detailed explanations of current methodology, relevant exercises and popular software tools.
Author : R. deSalle
Publisher : Springer Science & Business Media
ISBN 13 : 9783764357252
Total Pages : 390 pages
Book Rating : 4.3/5 (572 download)
Download or read book Molecular Approaches To Ecology And Evolution written by R. deSalle and published by Springer Science & Business Media. This book was released on 1998-09-29 with total page 390 pages. Available in PDF, EPUB and Kindle. Book excerpt: "The last ten years have seen an explosion of activity in the application of molecular biological techniques to evolutionary and ecological studies. This volume attempts to summarize advances in the field and place into context the wide variety of methods available to ecologists and evolutionary biologists using molecular techniques. Both the molecular techniques and the variety of methods available for the analysis of such data are presented in the text. The book has three major sections - populations, species and higher taxa. Each of these sections contains chapters by leading scientists working at these levels, where clear and concise discussion of technology and implication of results are presented. The volume is intended for advanced students of ecology and evolution and would be a suitable textbook for advanced undergraduate and graduate student seminar courses." -- Publisher.
Author : David Sepkoski
Publisher : University of Chicago Press
ISBN 13 : 022627294X
Total Pages : 441 pages
Book Rating : 4.2/5 (262 download)
Download or read book Rereading the Fossil Record written by David Sepkoski and published by University of Chicago Press. This book was released on 2015-03-05 with total page 441 pages. Available in PDF, EPUB and Kindle. Book excerpt: Rereading the Fossil Record presents the first-ever historical account of the origin, rise, and importance of paleobiology, from the mid-nineteenth century to the late 1980s. Drawing on a wealth of archival material, David Sepkoski shows how the movement was conceived and promoted by a small but influential group of paleontologists and examines the intellectual, disciplinary, and political dynamics involved in the ascendency of paleobiology. By tracing the role of computer technology, large databases, and quantitative analytical methods in the emergence of paleobiology, this book also offers insight into the growing prominence and centrality of data-driven approaches in recent science.
Author : Michael M. Miyamoto
Publisher : Oxford University Press
ISBN 13 : 0195361970
Total Pages : 369 pages
Book Rating : 4.1/5 (953 download)
Download or read book Phylogenetic Analysis of DNA Sequences written by Michael M. Miyamoto and published by Oxford University Press. This book was released on 1991-11-14 with total page 369 pages. Available in PDF, EPUB and Kindle. Book excerpt: With increasing frequency, systematic and evolutionary biologists have turned to the techniques of molecular biology to complement their traditional morphological and anatomical approaches to questions of the historical relationship and descent among groups of animals and plants. In particular, the comparative analysis of DNA sequences is becoming a common and important focus of research attention today. The objective of this volume is to survey the emerging field of molecular systematics of DNA sequences, and to appraise the strengths and limitations of the different approaches yielded by these techniques. The contributors are an internationally recognized group of investigators from different schools and disciplines who critically address a diversity of crucial questions about DNA systematics, including DNA sequence data acquisition, phylogenetic inference, congruence and consensus problems, limitations of molecular data, and the integration of molecular and morphological data sets. The work will interest all botanists and zoologists involved in systematics, taxonomy, and evolution.
Author : R. DeSalle
Publisher : Birkhäuser
ISBN 13 : 3034881142
Total Pages : 301 pages
Book Rating : 4.0/5 (348 download)
Download or read book Molecular Systematics and Evolution: Theory and Practice written by R. DeSalle and published by Birkhäuser. This book was released on 2013-03-08 with total page 301 pages. Available in PDF, EPUB and Kindle. Book excerpt: Important practical implications are established by case reports and specific examples. The present book is the ideal complement to the practitioner’s manual Techniques in Molecular Systematics and Evolution, recently published by the same editors in the Birkhäuser MTBM book series. The first part of this book deals with important applications of evolutionary and systematic analysis at different taxonomic levels. The second part discusses DNA multiple sequence alignment, species designations using molecular data, evo-devo and other topics that are problematic or controversial. In the last part, novel topics in molecular evolution and systematics, like genomics, comparative methods in molecular evolution and the use of large data bases are described. The final chapter deals with problems in bacterial evolution, considering the increasing access to large numbers of complete genome sequences.
Author : Rolf G. Beutel
Publisher : Walter de Gruyter
ISBN 13 : 3110264048
Total Pages : 532 pages
Book Rating : 4.1/5 (12 download)
Download or read book Insect Morphology and Phylogeny written by Rolf G. Beutel and published by Walter de Gruyter. This book was released on 2013-12-12 with total page 532 pages. Available in PDF, EPUB and Kindle. Book excerpt: In the last decades a remarkable renaissance has materialized in insect morphology, mainly triggered by the development of new cutting-edge technologies. This is an exciting time for biological synthesis where the mysteries and data derived from genomes can be combined with centuries of data from morphology and development. And, now, more than ever, detailed knowledge of morphology is essential to understanding the evolution of all groups of organisms. In this “age of phylogenomics” researchers rely on morphological data to support molecular findings, test complex evolutionary scenarios, and for placing fossil taxa. This textbook provides an in-depth treatment of the structures and the phylogeny of the megadiverse Hexapoda. The first part presents an up-to-date overview of general insect morphology with detailed drawings, scanning electron micrographs, and 3-D reconstructions. Also included is a chapter covering innovative morphological techniques (e.g., μ-computer tomography, 3-D modeling), brief treatments of insect development and phylogenetic methods, and a comprehensive morphological glossary. The second part is of a modern synthesis of insect systematics that includes taxon-specific morphological information for all Orders. The work is an invaluable reference for students and researchers working in all facets of biology and is a must for evolutionary biologists. A detailed understanding of morphology is essential in unraveling phylogenetic relationships and developing complex evolutionary scenarios. Increasingly researchers in phylogenomics are re/turning to morphological data to support their findings, while the development of new cutting-edge technologies has further increased interest in this growing field. This definitive handbook provides an in-depth treatment of insect morphology. The first part presents an up-to-date overview of insect morphology with detailed drawings, brilliant scanning electron micrographs and 3-D reconstructions as interactive PDFs. This is complemented by a chapter on innovative morphological techniques (e.g., μ-computer tomography, 3-D modeling) and a comprehensive morphological glossary. The second part treats the state of the art in insect systematics and includes taxon-specific morphological information for all orders. Systematics are treated formally, with for example the arguments for relationships (“apomorphies”) always listed explicitly. The work is a useful reference for students and researchers working in different fields of biology and a must for those dealing with insects from an evolutionary perspective.
Author : Thomas Bartolomaeus
Publisher : Springer Science & Business Media
ISBN 13 : 9781402029516
Total Pages : 406 pages
Book Rating : 4.0/5 (295 download)
Download or read book Morphology, Molecules, Evolution and Phylogeny in Polychaeta and Related Taxa written by Thomas Bartolomaeus and published by Springer Science & Business Media. This book was released on 2005-07-13 with total page 406 pages. Available in PDF, EPUB and Kindle. Book excerpt: Annelida, mainly consisting of marine Polychaeta and in faunal and partly parasitic Clitellata, is one the most significant metazoan taxa. Its more than 20.000 described species invade nearly all habitats and play a central role in marine benthic systems as well as in terrestrial soil communities. Annelids include all soft-bodied segmented worm-like organisms and have been recognized as a separate "phylum" for almost 200 years. Recently, evidence has been accumulated which shows that some of the groups formerly regarded as independent "phyla" such as Pogonophora (now recognized as Siboglinidae), Echiura, Myzostomida and perhaps Sipuncula, are most probably nothing else than greatly modified Annelida. The extreme morphological diversity found especially in Polychaeta displays the plasticity of a simple segmented organisation that basically is nothing else but a serial repetition of identical units. Thus, annelids are highly important to our understanding of fundamental questions about morphological and adaptive diversity, as well as clarifying evolutionary changes and phylogenetic relationships. The book aims to summarize our knowledge on Polychaetes polychaetes and their allies and gives an overview of recent advances gained by studies that employed conventional and modern methods plus, increasingly and importantly, the use of molecular markers and computer-assisted kinship analyses. It also reflects the state of art in polychaete sciences and presents new questions and controversies. As such it will significantly influence the direction of research on Polychaeta and their related taxa.
Author : Thomas J. Givnish
Publisher : Cambridge University Press
ISBN 13 : 9780521779296
Total Pages : 652 pages
Book Rating : 4.7/5 (792 download)
Download or read book Molecular Evolution and Adaptive Radiation written by Thomas J. Givnish and published by Cambridge University Press. This book was released on 2000-05-08 with total page 652 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume surveys advances in the study of adaptive radiation showing how molecular characters can be used to analyze the origin and pattern of diversification within a lineage in a non-circular fashion.
Author : Henrik Christensen
Publisher : Springer Nature
ISBN 13 : 3031452933
Total Pages : 257 pages
Book Rating : 4.0/5 (314 download)
Download or read book Introduction to Bioinformatics in Microbiology written by Henrik Christensen and published by Springer Nature. This book was released on 2023-11-27 with total page 257 pages. Available in PDF, EPUB and Kindle. Book excerpt: This updated and extended second edition of the textbook introduces the basic concepts of bioinformatics and enhances students' skills in the use of software and tools relevant to microbiology research. It discusses the most relevant methods for analysing data and teaches readers how to draw valid conclusions from the observations obtained. Free software and servers available on the Internet are presented in an updated version of 2023 and more advanced stand-alone software is proposed as a second option. In addition, new tools for microbial genome analysis and new flowcharts that complement the didactic elements have been added. Exercises and training questionnaires are included at the end of each chapter to facilitate learning. The book is aimed at Ph.D. students and advanced undergraduate students in microbiology, biotechnology, and (veterinary) medicine with little or basic knowledge of bioinformatics.
Author : Øyvind Hammer
Publisher : John Wiley & Sons
ISBN 13 : 1405172940
Total Pages : 368 pages
Book Rating : 4.4/5 (51 download)
Download or read book Paleontological Data Analysis written by Øyvind Hammer and published by John Wiley & Sons. This book was released on 2008-04-15 with total page 368 pages. Available in PDF, EPUB and Kindle. Book excerpt: During the last 10 years numerical methods have begun to dominate paleontology. These methods now reach far beyond the fields of morphological and phylogenetic analyses to embrace biostratigraphy, paleobiogeography, and paleoecology. Paleontological Data Analysis explains the key numerical techniques in paleontology, and the methodologies employed in the software packages now available. Following an introduction to numerical methodologies in paleontology, and to univariate and multivariate techniques (including inferential testing), there follow chapters on morphometrics, phylogenetic analysis, paleobiogeography and paleoecology, time series analysis, and quantitative biostratigraphy Each chapter describes a range of techniques in detail, with worked examples, illustrations, and appropriate case histories Describes the purpose, type of data required, functionality, and implementation of each technique, together with notes of caution where appropriate The book and the accompanying PAST software package (see www.blackwellpublishing.com/hammer) are important investigative tools in a rapidly developing field characterized by many exciting new discoveries and innovative techniques An invaluable tool for all students and researchers involved in quantitative paleontology
Author : Ward Wheeler
Publisher :
ISBN 13 :
Total Pages : 380 pages
Book Rating : 4.X/5 (3 download)
Download or read book Dynamic Homology and Phylogenetic Systematics written by Ward Wheeler and published by . This book was released on 2006 with total page 380 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Author : Masatoshi Nei
Publisher : Oxford University Press
ISBN 13 : 0199881227
Total Pages : 444 pages
Book Rating : 4.1/5 (998 download)
Download or read book Molecular Evolution and Phylogenetics written by Masatoshi Nei and published by Oxford University Press. This book was released on 2000-07-27 with total page 444 pages. Available in PDF, EPUB and Kindle. Book excerpt: During the last ten years, remarkable progress has occurred in the study of molecular evolution. Among the most important factors that are responsible for this progress are the development of new statistical methods and advances in computational technology. In particular, phylogenetic analysis of DNA or protein sequences has become a powerful tool for studying molecular evolution. Along with this developing technology, the application of the new statistical and computational methods has become more complicated and there is no comprehensive volume that treats these methods in depth. Molecular Evolution and Phylogenetics fills this gap and present various statistical methods that are easily accessible to general biologists as well as biochemists, bioinformatists and graduate students. The text covers measurement of sequence divergence, construction of phylogenetic trees, statistical tests for detection of positive Darwinian selection, inference of ancestral amino acid sequences, construction of linearized trees, and analysis of allele frequency data. Emphasis is given to practical methods of data analysis, and methods can be learned by working through numerical examples using the computer program MEGA2 that is provided.
Author : Hans-Peter Schultze
Publisher : Cornell University Press
ISBN 13 : 1501718339
Total Pages : 738 pages
Book Rating : 4.5/5 (17 download)
Download or read book Origins of the Higher Groups of Tetrapods written by Hans-Peter Schultze and published by Cornell University Press. This book was released on 2018-10-18 with total page 738 pages. Available in PDF, EPUB and Kindle. Book excerpt: This edited volume explores the various views on the origins of tetrapods—amphibians, reptiles, birds, and mammals—views that agree or differ depending in part on how certain fossil animals are classified and which methodology is used for classification. Eighteen chapters by an international group of paleontologists and neontologists here present current hypotheses, emphasizing the kinds of data needed to answer controversial questions, as well as the variety of solutions that emerge from diferent analyses of the same data set. The book is arranged in five sections, each of which contains an overview essay that either describes the development of various schools of thought regarding the origin of the tetrapod group in question or critically summarizes the arguments presented in the section. The first section addresses the origins of tetrapods as a group, focusing on lobe-finned fishes and early tetrapods. Next is a section dealing with amphbians, followed by one on reptiles. The fourth section concerns avian origins, and the final section treats the origins and early diversification of mammals. With an overall goal of stimulating critical evaluation by the reader rather than providing unequivocal answers, this volume will be of particaular interest to vertebrate paleontologists, evolutionary morphologists, and ichthyological, herpatological, avian, and mammalian systematists.
Author : Robert Scotland
Publisher : CRC Press
ISBN 13 : 1482268248
Total Pages : 226 pages
Book Rating : 4.4/5 (822 download)
Download or read book Homology and Systematics written by Robert Scotland and published by CRC Press. This book was released on 2014-04-21 with total page 226 pages. Available in PDF, EPUB and Kindle. Book excerpt: When looking at groups of organisms, shared characteristics (homologues) provide the raw data from which hypotheses of common ancestry may be suggested. In order to explore the relationship between homologues and particular hypotheses of common ancestry, complex matrices are devised, where homologues are coded, allowing theories of homology to be developed and tested. Practically nothing has been written about this matrix-building process, which is fundamental to our understanding of diversity and evolutionary history. This book fills the gap by discussing the ways observations are coded and the consequences for resulting hypotheses using case studies and theoretical examples.
