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Phylogenetic Analysis Morpholo
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Book Synopsis From Observations to Optimal Phylogenetic Trees by : Pablo A. Goloboff
Download or read book From Observations to Optimal Phylogenetic Trees written by Pablo A. Goloboff and published by CRC Press. This book was released on 2022-07-22 with total page 289 pages. Available in PDF, EPUB and Kindle. Book excerpt: Taxonomists specializing in different groups once based phylogenetic analysis only on morphological data; molecular data was used more rarely. Although molecular systematics is routine today, the use of morphological data continues to be important, especially for phylogenetic placement of many taxa known only from fossils and rare or difficult to collect species. In addition, morphological analyses help identify potential biases in molecular analyses. And finally, scenarios with respect to morphology continue to motivate biologists: the beauty of a cheetah or a baobab does not lie in their DNA sequence, but instead on what they are and do! This book is an up-to-date revision of methods and principles of phylogenetic analysis of morphological data. It is also a general guide for using the computer program TNT in the analysis of such data. The book covers the main aspects of phylogenetic analysis and general methods to compare classifications derived from molecules and morphology. The basic aspects of molecular analysis are covered only as needed to highlight the differences with methods and assumptions for analysis of morphological datasets.
Book Synopsis Morphology, Shape and Phylogeny by : Norman MacLeod
Download or read book Morphology, Shape and Phylogeny written by Norman MacLeod and published by CRC Press. This book was released on 2002-02-07 with total page 318 pages. Available in PDF, EPUB and Kindle. Book excerpt: Generally, biologists and mathematicians who study the shape and form of organisms have largely been working in isolation from those who work on evolutionary relationships through the analysis of common characteristics. Increasingly however, dialogue between the two communities is beginning to develop - but other than a handful of journal papers, t
Book Synopsis PHYLOGENETIC ANALYSIS MORPH PB by : Wiens Jj
Download or read book PHYLOGENETIC ANALYSIS MORPH PB written by Wiens Jj and published by Smithsonian. This book was released on 2000-06-17 with total page 220 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis The Paleobiological Revolution by : David Sepkoski
Download or read book The Paleobiological Revolution written by David Sepkoski and published by University of Chicago Press. This book was released on 2015-03-04 with total page 581 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Paleobiological Revolution chronicles the incredible ascendance of the once-maligned science of paleontology to the vanguard of a field. With the establishment of the modern synthesis in the 1940s and the pioneering work of George Gaylord Simpson, Ernst Mayr, and Theodosius Dobzhansky, as well as the subsequent efforts of Stephen Jay Gould, David Raup, and James Valentine, paleontology became embedded in biology and emerged as paleobiology, a first-rate discipline central to evolutionary studies. Pairing contributions from some of the leading actors of the transformation with overviews from historians and philosophers of science, the essays here capture the excitement of the seismic changes in the discipline. In so doing, David Sepkoski and Michael Ruse harness the energy of the past to call for further study of the conceptual development of modern paleobiology.
Book Synopsis Rereading the Fossil Record by : David Sepkoski
Download or read book Rereading the Fossil Record written by David Sepkoski and published by University of Chicago Press. This book was released on 2015-03-05 with total page 441 pages. Available in PDF, EPUB and Kindle. Book excerpt: Rereading the Fossil Record presents the first-ever historical account of the origin, rise, and importance of paleobiology, from the mid-nineteenth century to the late 1980s. Drawing on a wealth of archival material, David Sepkoski shows how the movement was conceived and promoted by a small but influential group of paleontologists and examines the intellectual, disciplinary, and political dynamics involved in the ascendency of paleobiology. By tracing the role of computer technology, large databases, and quantitative analytical methods in the emergence of paleobiology, this book also offers insight into the growing prominence and centrality of data-driven approaches in recent science.
Book Synopsis Insect Morphology and Phylogeny by : Rolf G. Beutel
Download or read book Insect Morphology and Phylogeny written by Rolf G. Beutel and published by Walter de Gruyter. This book was released on 2013-12-12 with total page 532 pages. Available in PDF, EPUB and Kindle. Book excerpt: In the last decades a remarkable renaissance has materialized in insect morphology, mainly triggered by the development of new cutting-edge technologies. This is an exciting time for biological synthesis where the mysteries and data derived from genomes can be combined with centuries of data from morphology and development. And, now, more than ever, detailed knowledge of morphology is essential to understanding the evolution of all groups of organisms. In this “age of phylogenomics” researchers rely on morphological data to support molecular findings, test complex evolutionary scenarios, and for placing fossil taxa. This textbook provides an in-depth treatment of the structures and the phylogeny of the megadiverse Hexapoda. The first part presents an up-to-date overview of general insect morphology with detailed drawings, scanning electron micrographs, and 3-D reconstructions. Also included is a chapter covering innovative morphological techniques (e.g., μ-computer tomography, 3-D modeling), brief treatments of insect development and phylogenetic methods, and a comprehensive morphological glossary. The second part is of a modern synthesis of insect systematics that includes taxon-specific morphological information for all Orders. The work is an invaluable reference for students and researchers working in all facets of biology and is a must for evolutionary biologists. A detailed understanding of morphology is essential in unraveling phylogenetic relationships and developing complex evolutionary scenarios. Increasingly researchers in phylogenomics are re/turning to morphological data to support their findings, while the development of new cutting-edge technologies has further increased interest in this growing field. This definitive handbook provides an in-depth treatment of insect morphology. The first part presents an up-to-date overview of insect morphology with detailed drawings, brilliant scanning electron micrographs and 3-D reconstructions as interactive PDFs. This is complemented by a chapter on innovative morphological techniques (e.g., μ-computer tomography, 3-D modeling) and a comprehensive morphological glossary. The second part treats the state of the art in insect systematics and includes taxon-specific morphological information for all orders. Systematics are treated formally, with for example the arguments for relationships (“apomorphies”) always listed explicitly. The work is a useful reference for students and researchers working in different fields of biology and a must for those dealing with insects from an evolutionary perspective.
Book Synopsis PHYLOGENETIC ANALYSIS MORPHOLO by : WIENS JOHN J
Download or read book PHYLOGENETIC ANALYSIS MORPHOLO written by WIENS JOHN J and published by Smithsonian. This book was released on 2000-06-17 with total page 220 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Author :Thomas Bartolomaeus Publisher :Springer Science & Business Media ISBN 13 :9781402029516 Total Pages :406 pages Book Rating :4.0/5 (295 download)
Book Synopsis Morphology, Molecules, Evolution and Phylogeny in Polychaeta and Related Taxa by : Thomas Bartolomaeus
Download or read book Morphology, Molecules, Evolution and Phylogeny in Polychaeta and Related Taxa written by Thomas Bartolomaeus and published by Springer Science & Business Media. This book was released on 2005-07-13 with total page 406 pages. Available in PDF, EPUB and Kindle. Book excerpt: Annelida, mainly consisting of marine Polychaeta and in faunal and partly parasitic Clitellata, is one the most significant metazoan taxa. Its more than 20.000 described species invade nearly all habitats and play a central role in marine benthic systems as well as in terrestrial soil communities. Annelids include all soft-bodied segmented worm-like organisms and have been recognized as a separate "phylum" for almost 200 years. Recently, evidence has been accumulated which shows that some of the groups formerly regarded as independent "phyla" such as Pogonophora (now recognized as Siboglinidae), Echiura, Myzostomida and perhaps Sipuncula, are most probably nothing else than greatly modified Annelida. The extreme morphological diversity found especially in Polychaeta displays the plasticity of a simple segmented organisation that basically is nothing else but a serial repetition of identical units. Thus, annelids are highly important to our understanding of fundamental questions about morphological and adaptive diversity, as well as clarifying evolutionary changes and phylogenetic relationships. The book aims to summarize our knowledge on Polychaetes polychaetes and their allies and gives an overview of recent advances gained by studies that employed conventional and modern methods plus, increasingly and importantly, the use of molecular markers and computer-assisted kinship analyses. It also reflects the state of art in polychaete sciences and presents new questions and controversies. As such it will significantly influence the direction of research on Polychaeta and their related taxa.
Book Synopsis Phylogenetic Analysis of Morphological Data by : John J. Wiens
Download or read book Phylogenetic Analysis of Morphological Data written by John J. Wiens and published by Smithsonian Institution. This book was released on 2000-06-17 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: In this volume, eleven leading systematists provide an overview of recent advances and controversies in morphological phylogenetics. They summarize new methodological developments—including approaches for analyzing ontogenetic data, fossils, morphometric characters, intraspecific variation, and hybrid taxa—and review published studies to evaluate how morphological phylogenetics has actually been practiced. They also discuss the relationship between morphological and molecular systematics, and address the controversial use of morphology-based phylogenies to study the evolution of morphological characters. This volume is the first dedicated to morphological phylogenetics. It will be a valuable synthesis for all phylogenetic biologists, including molecular and morphological systematists, paleontologists and neontologists, and botanists and zoologists.
Book Synopsis Molecular Approaches To Ecology And Evolution by : R. deSalle
Download or read book Molecular Approaches To Ecology And Evolution written by R. deSalle and published by Springer Science & Business Media. This book was released on 1998-09-29 with total page 390 pages. Available in PDF, EPUB and Kindle. Book excerpt: "The last ten years have seen an explosion of activity in the application of molecular biological techniques to evolutionary and ecological studies. This volume attempts to summarize advances in the field and place into context the wide variety of methods available to ecologists and evolutionary biologists using molecular techniques. Both the molecular techniques and the variety of methods available for the analysis of such data are presented in the text. The book has three major sections - populations, species and higher taxa. Each of these sections contains chapters by leading scientists working at these levels, where clear and concise discussion of technology and implication of results are presented. The volume is intended for advanced students of ecology and evolution and would be a suitable textbook for advanced undergraduate and graduate student seminar courses." -- Publisher.
Book Synopsis PHYLOGENETIC ANALYSIS OF MORPHOLOGICAL D by : PABLO A. GOLOBOFF
Download or read book PHYLOGENETIC ANALYSIS OF MORPHOLOGICAL D written by PABLO A. GOLOBOFF and published by CRC Press. This book was released on 2022-06 with total page 664 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Molecular Systematics and Evolution: Theory and Practice by : R. DeSalle
Download or read book Molecular Systematics and Evolution: Theory and Practice written by R. DeSalle and published by Birkhäuser. This book was released on 2013-03-08 with total page 301 pages. Available in PDF, EPUB and Kindle. Book excerpt: Important practical implications are established by case reports and specific examples. The present book is the ideal complement to the practitioner’s manual Techniques in Molecular Systematics and Evolution, recently published by the same editors in the Birkhäuser MTBM book series. The first part of this book deals with important applications of evolutionary and systematic analysis at different taxonomic levels. The second part discusses DNA multiple sequence alignment, species designations using molecular data, evo-devo and other topics that are problematic or controversial. In the last part, novel topics in molecular evolution and systematics, like genomics, comparative methods in molecular evolution and the use of large data bases are described. The final chapter deals with problems in bacterial evolution, considering the increasing access to large numbers of complete genome sequences.
Book Synopsis Molecular Tools for Screening Biodiversity by : A. Karp
Download or read book Molecular Tools for Screening Biodiversity written by A. Karp and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 482 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mark Chase There are many literature resources available to molecular biologists wishing to assess genetic variation, but the myriad of techniques and approaches potentially available to the plant breeder and the evolutionary biologist is truly bewildering, and most have never been evaluated side-by-side on the same sets of samples. Additionally, it is often not recognized that tools that are useful for breeders can often be adapted for use in evolutionary studies and vice versa, but this is generally the case. The borderline between population genetics and phylogenetics is vague and difficult to assess, and a combination of both types of tools is best when it is not clear with which area one is dealing. Furthermore, it is not now appropriate to use just one type of marker in any kind of study; most markers have the potential to misinform under certain conditions, so it is always wise to incorporate at least two different types of assessments into any project. This volume is designed to facilitate this sort of multiple approach and provides comparative data on most currently available methods so that researchers can more intelligently select those appropriate to their area of interest, regardless of whether it is in the realm of breeding or evolutionary biology.
Book Synopsis The Phylogenetic Handbook by : Marco Salemi
Download or read book The Phylogenetic Handbook written by Marco Salemi and published by Cambridge University Press. This book was released on 2009-03-26 with total page 750 pages. Available in PDF, EPUB and Kindle. Book excerpt: A broad, hands on guide with detailed explanations of current methodology, relevant exercises and popular software tools.
Book Synopsis Homology and Systematics by : Robert Scotland
Download or read book Homology and Systematics written by Robert Scotland and published by CRC Press. This book was released on 2014-04-21 with total page 226 pages. Available in PDF, EPUB and Kindle. Book excerpt: When looking at groups of organisms, shared characteristics (homologues) provide the raw data from which hypotheses of common ancestry may be suggested. In order to explore the relationship between homologues and particular hypotheses of common ancestry, complex matrices are devised, where homologues are coded, allowing theories of homology to be developed and tested. Practically nothing has been written about this matrix-building process, which is fundamental to our understanding of diversity and evolutionary history. This book fills the gap by discussing the ways observations are coded and the consequences for resulting hypotheses using case studies and theoretical examples.
Book Synopsis Refining Phylogenetic Analyses by : Pablo A. Goloboff
Download or read book Refining Phylogenetic Analyses written by Pablo A. Goloboff and published by CRC Press. This book was released on 2022-07-22 with total page 312 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume discusses the aspects of a phylogenetic analysis that go beyond basic calculation of most parsimonious trees. Practical application of all principles discussed is illustrated by reference to TNT, a freely available software package that can perform all the steps needed in a phylogenetic analysis. The first problem considered is how to summarize and compare multiple trees (including identification and handling wildcard taxa). Evaluation of the strength of support for groups, another critical component of any phylogenetic analysis, is given careful consideration. The different interpretations of measures of support are discussed and connected with alternative implementations. The book reviews rationales for estimating character reliability on the basis of homoplasy, with particular attention to morphological characters. The main methods for character weighting and their practical implementation, several of them unique to TNT, are discussed ad libitum. Also unique to TNT is the ability to directly analyze morphometric data (including landmarks), on the same footing as discrete characters. Finally, the scripting language of TNT is introduced. With scripting, it is possible to "program" TNT to create personalized routines and automate complex calculations, taking analyses to the next level and allowing exploration of new methods and ideas. Key Features Discusses the treatment of ambiguity in phylogenetic analyses in depth, for summarizing results or comparing trees Reviews literature on arguments and methods for weighting morphological characters and their practical application Describes theory and application of methods for evaluating strength of group support, based on either resampling or comparisons with suboptimal trees Discusses the use of morphometric characters in phylogenetic analysis Presents extensive information on commands and options of the TNT computer program, including the use and creation of scripts
Book Synopsis Deep Metazoan Phylogeny: The Backbone of the Tree of Life by : J. Wolfgang Wägele
Download or read book Deep Metazoan Phylogeny: The Backbone of the Tree of Life written by J. Wolfgang Wägele and published by Walter de Gruyter. This book was released on 2014-02-27 with total page 764 pages. Available in PDF, EPUB and Kindle. Book excerpt: The growing success of molecular methods has challenged traditional views of animal evolution and a large number of alternative hypotheses are hotly debated today. For the deep metazoan phylogeny project, data sets of hitherto unmatched quality and quantity were compiled and analysed with innovative bioinformatics tools. The book begins at the base of the tree of life to discuss the origin of animals and early branches of the phylogenetic tree. The following section presents special data sets gained from mitochondrial genomes and from morphology, with a focus on nervous systems. The final section is dedicated to theoretical aspects of data analysis and new bioinformatics tools. The book closes with a unique general discussion of all hypotheses contained in previous chapters. This work provides the most comprehensive overview available of the state of the art in this exciting field of evolutionary research.
