Peptide Microarrays

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Peptide Microarrays

Author : Marina Cretich
Publisher : Springer Nature
ISBN 13 : 1071627325
Total Pages : 261 pages
Book Rating : 4.0/5 (716 download)

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Book Synopsis Peptide Microarrays by : Marina Cretich

Download or read book Peptide Microarrays written by Marina Cretich and published by Springer Nature. This book was released on 2022-09-24 with total page 261 pages. Available in PDF, EPUB and Kindle. Book excerpt: This detailed volume provides an updated overview of current uses of peptide microarray technology, showcasing consolidated applications while highlighting some of the most intriguing novelties and emerging fields of use. The methodologies within this collection are of considerable value for both advanced users and new-comers in the peptide microarray arena, as the renowned contributors describe full coverage of the aspects related to their workflows, from microchip manufacturing to advanced analytical applications. Written for the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step and readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and up-to-date, Peptide Microarrays: Methods and Protocols, Third Edition aims to make the use of peptide microarrays more and more accessible while stimulating further developments to sustain exciting discoveries in the biochemistry and medicine realms.

Peptide Microarrays

Author : Marina Cretich
Publisher :
ISBN 13 : 9781493930388
Total Pages : 298 pages
Book Rating : 4.9/5 (33 download)

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Book Synopsis Peptide Microarrays by : Marina Cretich

Download or read book Peptide Microarrays written by Marina Cretich and published by . This book was released on 2016 with total page 298 pages. Available in PDF, EPUB and Kindle. Book excerpt: This expert volume provides insights into the technological fundamentals together with a comprehensive overview of the potentialities of peptide microarray technology in basic research and clinical assays. Advancements made in recent years in peptide library synthesis, immobilization chemistry, and array production have created a foundation from which different new applications are derived, extending the ways in which peptide microarray technology is applied every day. Divided into three sections, the book covers cutting-edge methods and technology, chemoselective strategies for peptide immobilization, and peptide microarrays for medical applications. Written for the high successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible protocols, and tips on troubleshooting and avoiding known pitfalls. Fully updated and authoritative, Peptide Microarrays: Methods and Protocols, Second Edition seeks to encourage scientists to apply current peptide array protocols to the study of interesting new biochemical and medical questions and to assist researchers aiming at developing new methods to further develop peptide microarray technology.

Protein and Peptide-based Microarrays for Multiplex Detection

Author : Navid Rabiee
Publisher : IOP Publishing Limited
ISBN 13 : 9780750336659
Total Pages : 70 pages
Book Rating : 4.3/5 (366 download)

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Book Synopsis Protein and Peptide-based Microarrays for Multiplex Detection by : Navid Rabiee

Download or read book Protein and Peptide-based Microarrays for Multiplex Detection written by Navid Rabiee and published by IOP Publishing Limited. This book was released on 2020-10-07 with total page 70 pages. Available in PDF, EPUB and Kindle. Book excerpt: Protein and Peptide-based Microarrays for Multiplex Detection looks at the aspects of protein and peptide-based microarrays for multiplex detection, based on Rabiee's Theory. A comprehensive guide for scientists, students and doctors.

Purification of Peptides in High-Complexity Arrays

Author : Christopher Schirwitz
Publisher : Springer Science & Business Media
ISBN 13 : 3319008072
Total Pages : 138 pages
Book Rating : 4.3/5 (19 download)

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Book Synopsis Purification of Peptides in High-Complexity Arrays by : Christopher Schirwitz

Download or read book Purification of Peptides in High-Complexity Arrays written by Christopher Schirwitz and published by Springer Science & Business Media. This book was released on 2013-08-13 with total page 138 pages. Available in PDF, EPUB and Kindle. Book excerpt: Christopher Schirwitz's thesis focuses on improving the quality of in situ synthesized high-complexity peptide micro arrays. Micro arrays containing proteins or small protein fragments in the form of peptides have become of great interest in proteomic research. With the help of these microarrays a large number of potential target molecules can be screened for interaction with a probe in a short timeframe. However, protein and peptide micro arrays are still lagging behind oligonucleotide arrays in terms of density, quality and manufacturing costs. A new approach developed at the German Cancer Research Center (DKFZ) has improved the synthesis of high-density peptide arrays. The current technology is capable of producing arrays with up to 40,000 different peptides per square cm by means of micro particle-based solid phase peptide synthesis. However, in situ synthesis approaches bear a conceptual disadvantage: The quality of the peptides is dependent on the efficiency of the synthesis so that peptide fragments are present in the resulting array among the desired full-length peptides. In peptide-protein interaction studies such peptide fragments. The central achievement of this thesis is the development of a new method allowing for the fast one-step purification of entire arrays without loss of resolution or spatial information. Christopher Schirwitz's work has resulted in a number of publications in high ranking journals.

Protein Microarray Technology

Author : Dev Kambhampati
Publisher : John Wiley & Sons
ISBN 13 : 3527605215
Total Pages : 276 pages
Book Rating : 4.5/5 (276 download)

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Book Synopsis Protein Microarray Technology by : Dev Kambhampati

Download or read book Protein Microarray Technology written by Dev Kambhampati and published by John Wiley & Sons. This book was released on 2006-03-06 with total page 276 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is the first of its kind in the field of protein microarrays and addresses novel strategies for constructing highly functional and biocompatible microarrays for screening proteins. The list of authors consisting of world leading experts provide a roadmap for solving the complex challenges that are currently faced while monitoring protein-protein interactions over a wide range of microarray platforms. In doing so, they also offer a comprehensive overview of microarray surface chemistry, detection technologies, fabrication options for array development, and data analysis of numerous types of protein interactions. Topics covered include: -Types of biomolecular interactions -Surface chemistry -Detection technologies -Spotting technologies -Bioinformatics/data analysis. While primarily intended to serve as a reference for researchers and students embarking on the exciting fields of proteomics, drug discovery and clinical diagnostics, this technology is also expected to potentially impact the areas of food diagnostics, environmental monitoring and national security.

Peptide Arrays on Membrane Supports

Author : Joachim Koch
Publisher : Springer Science & Business Media
ISBN 13 : 3662092298
Total Pages : 192 pages
Book Rating : 4.6/5 (62 download)

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Book Synopsis Peptide Arrays on Membrane Supports by : Joachim Koch

Download or read book Peptide Arrays on Membrane Supports written by Joachim Koch and published by Springer Science & Business Media. This book was released on 2013-03-09 with total page 192 pages. Available in PDF, EPUB and Kindle. Book excerpt: Proteins interacting with diverse ligands - proteins, peptides or DNA - are the basic principles underlying many biological processes, such as antigen-antibody binding, signal transduction or receptor binding. The technique of oligopeptide synthesis on a cellulose membrane and the subsequent binding assays allow the investigation of protein interactions. A particular advantage of these peptide arrays (SPOT - technology) is the high number of oligopeptide probes that can be tested in parallel. Detailed protocols for peptide synthesis, and the analysis of protein-protein, protein-DNA interactions as well as epitope mapping are presented in this manual. It is ideally suited not only for basic research laboratories but also for diagnostic and therapeutic applications since many diseases are related to dysfunctions in protein recognition and binding.

Protein Microarrays

Author : Mark Schena
Publisher : Jones & Bartlett Learning
ISBN 13 : 9780763731274
Total Pages : 510 pages
Book Rating : 4.7/5 (312 download)

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Book Synopsis Protein Microarrays by : Mark Schena

Download or read book Protein Microarrays written by Mark Schena and published by Jones & Bartlett Learning. This book was released on 2005 with total page 510 pages. Available in PDF, EPUB and Kindle. Book excerpt: Protein Microarrays is one of the first books in this exciting new technology and will be an essential reference for most biologists and biotechnology professionals.

Protein Microarrays for Disease Analysis

Author : Rodrigo Barderas
Publisher : Humana
ISBN 13 : 9781071615614
Total Pages : 282 pages
Book Rating : 4.6/5 (156 download)

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Book Synopsis Protein Microarrays for Disease Analysis by : Rodrigo Barderas

Download or read book Protein Microarrays for Disease Analysis written by Rodrigo Barderas and published by Humana. This book was released on 2021-07-11 with total page 282 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume focuses on protein analysis, and covers a wide array of uses of protein microarray for disease analysis. The chapters in this book discuss different stages of protein microarrays from their construction to their use, including different types of protein microarrays such as recombinant proteins, antibody, phage, and NAPPA protein microarrays, in planar format or in solution via beads arrays. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Comprehensive and cutting-edge, Protein Microarrays for Disease Analysis: Methods and Protocols is a valuable resource for graduate and post-doctoral fellows interested in protein microarrays, as well as senior researchers interested in gaining more insight into this developing field.

Proteomics for Biological Discovery

Author : Timothy D. Veenstra
Publisher : John Wiley & Sons
ISBN 13 : 0470007737
Total Pages : 361 pages
Book Rating : 4.4/5 (7 download)

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Book Synopsis Proteomics for Biological Discovery by : Timothy D. Veenstra

Download or read book Proteomics for Biological Discovery written by Timothy D. Veenstra and published by John Wiley & Sons. This book was released on 2006-06-12 with total page 361 pages. Available in PDF, EPUB and Kindle. Book excerpt: Written by recognized experts in the study of proteins, Proteomics for Biological Discovery begins by discussing the emergence of proteomics from genome sequencing projects and a summary of potential answers to be gained from proteome-level research. The tools of proteomics, from conventional to novel techniques, are then dealt with in terms of underlying concepts, limitations and future directions. An invaluable source of information, this title also provides a thorough overview of the current developments in post-translational modification studies, structural proteomics, biochemical proteomics, microfabrication, applied proteomics, and bioinformatics relevant to proteomics. Presents a comprehensive and coherent review of the major issues faced in terms of technology development, bioinformatics, strategic approaches, and applications Chapters offer a rigorous overview with summary of limitations, emerging approaches, questions, and realistic future industry and basic science applications Discusses higher level integrative aspects, including technical challenges and applications for drug discovery Accessible to the novice while providing experienced investigators essential information Proteomics for Biological Discovery is an essential resource for students, postdoctoral fellows, and researchers across all fields of biomedical research, including biochemistry, protein chemistry, molecular genetics, cell/developmental biology, and bioinformatics.

Microarrays

Author : Kilian Dill
Publisher : Springer Science & Business Media
ISBN 13 : 0387727191
Total Pages : 355 pages
Book Rating : 4.3/5 (877 download)

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Book Synopsis Microarrays by : Kilian Dill

Download or read book Microarrays written by Kilian Dill and published by Springer Science & Business Media. This book was released on 2008-12-30 with total page 355 pages. Available in PDF, EPUB and Kindle. Book excerpt: Combinatorial chemistry is used to find materials that form sensor microarrays. This book discusses the fundamentals, and then proceeds to the many applications of microarrays, from measuring gene expression (DNA microarrays) to protein-protein interactions, peptide chemistry, carbodhydrate chemistry, electrochemical detection, and microfluidics.

Microarrays in Diagnostics and Biomarker Development

Author : Bertrand Jordan
Publisher : Springer Science & Business Media
ISBN 13 : 3642282032
Total Pages : 241 pages
Book Rating : 4.6/5 (422 download)

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Book Synopsis Microarrays in Diagnostics and Biomarker Development by : Bertrand Jordan

Download or read book Microarrays in Diagnostics and Biomarker Development written by Bertrand Jordan and published by Springer Science & Business Media. This book was released on 2012-04-23 with total page 241 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microarray technology has made strong progress over the past decade, and there have also been significant changes in application areas, from nucleic acids to proteomics and from research to clinical applications. This book provides a comprehensive overview of microarrays in diagnostics and biomarker development, covering DNA, peptide, protein and tissue arrays. The focus is on entities that are in actual clinical use, or quite close, and on recent developments, such as peptide and aptamer arrays. A further topic is the miniaturisation towards “nanoarrays”, which is expected to have great potential in clinical applications. Relevant issues of bioinformatics and statistical analysis of array data are discussed in detail, as well as the barriers to the commercialisation of array-based tests and the vexing IP issues involved. Thus, the book should be very useful tor active array users as well as to newcomers seeking to make the best choice between different technologies.

Functional Protein Microarrays in Drug Discovery

Author : Paul F. Predki
Publisher : CRC Press
ISBN 13 : 1420009842
Total Pages : 482 pages
Book Rating : 4.4/5 (2 download)

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Book Synopsis Functional Protein Microarrays in Drug Discovery by : Paul F. Predki

Download or read book Functional Protein Microarrays in Drug Discovery written by Paul F. Predki and published by CRC Press. This book was released on 2007-03-30 with total page 482 pages. Available in PDF, EPUB and Kindle. Book excerpt: An ideal text for biotechnologists, protein chemists, and biochemists, Functional Protein Microarrays in Drug Discovery explores all aspects of functional protein microarrays, including basic principles, methods, and applications. The book discusses the generation of functional protein content and describes both standard and state-of-the-art fabrication methods. It reviews current and next generation approaches to assay detection and presents a wide range of applications, from biomolecular interaction discovery and characterization to immune response profiling. The book also addresses several fundamental computational issues, bioinformatics and data analysis.

Microarrays

Author : Hans-Joachim Müller
Publisher : Academic Press
ISBN 13 : 0120885433
Total Pages : 229 pages
Book Rating : 4.1/5 (28 download)

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Book Synopsis Microarrays by : Hans-Joachim Müller

Download or read book Microarrays written by Hans-Joachim Müller and published by Academic Press. This book was released on 2006 with total page 229 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microarray technology allows us to answer many questions about gene expression and drug-target screening by employing high-throughput screening. This book dedicates itself to microarrays with clear and understandable explanations and an overview of the presently available hardware, biochips and software. Separate chapters cover the different requirements for DNA and protein chips as well as spotters and scanners.

Development of Chip-based Electrochemically- and Light-directed Peptide Microarray Synthesis

Author : Pallav Kumar
Publisher :
ISBN 13 :
Total Pages : 231 pages
Book Rating : 4.:/5 (87 download)

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Book Synopsis Development of Chip-based Electrochemically- and Light-directed Peptide Microarray Synthesis by : Pallav Kumar

Download or read book Development of Chip-based Electrochemically- and Light-directed Peptide Microarray Synthesis written by Pallav Kumar and published by . This book was released on 2013 with total page 231 pages. Available in PDF, EPUB and Kindle. Book excerpt: Peptide microarrays may prove to be a powerful tool for proteomics research and clinical diagnosis applications. Fodor et al. and Maurer et al. have shown proof-of-concept methods of light- and electrochemically-directed peptide microarray fabrication on glass and semiconductor microchips respectively. In this work, peptide microarray fabrication based on the abovementioned techniques were optimized. In addition, MALDI mass spectrometry based peptide synthesis characterization on semiconductor microchips was developed and novel applications of a CombiMatrix (CBMX) platform for electrochemically controlled synthesis were explored. We have investigated performance of 2-(2-nitrophenyl)propoxycarbonyl (NPPOC) derivatives as photo-labile protecting group. Specifically, influence of substituents on 4 and 5 positions of phenyl ring of NPPOC group on the rate of photolysis and the yield of the amine was investigated. The results indicated that substituents capable of forming a pi network with the nitro group enhanced the rate of photolysis and yield. Once such properly substituted NPPOC groups were used, the rate of photolysis/yield depended on the nature of protected amino group indicating that a different chemical step during the photo-cleavage process became the rate limiting step. We also focused on electrochemically-directed parallel synthesis of high-density peptide microarrays using the CBMX technology referred to above which uses electrochemically generated acids to perform patterned chemistry. Several issues related to peptide synthesis on the CBMX platform were studied and optimized, with emphasis placed on the reactions of electro-generated acids during the deprotection step of peptide synthesis. We have developed a MALDI mass spectrometry based method to determine the chemical composition of microarray synthesis, directly on the feature. This method utilizes non-diffusional chemical cleavage from the surface, thereby making the chemical characterization of high-density microarray features simple, accurate, and amenable to high-throughput. CBMX Corp. has developed a microarray reader which is based on electro-chemical detection of redox chemical species. Several parameters of the instrument were studied and optimized and novel redox applications of peptide microarrays on CBMX platform were also investigated using the instrument. These include (i) a search of metal binding catalytic peptides to reduce overpotential associated with water oxidation reaction and (ii) an immobilization of peptide microarrays using electro-polymerized polypyrrole.

Microarrays

Author : Jang B. Rampal
Publisher : Springer Science & Business Media
ISBN 13 : 1588295893
Total Pages : 923 pages
Book Rating : 4.5/5 (882 download)

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Book Synopsis Microarrays by : Jang B. Rampal

Download or read book Microarrays written by Jang B. Rampal and published by Springer Science & Business Media. This book was released on 2007-07-27 with total page 923 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microarray Technology, Volumes 1 and 2, present information in designing and fabricating arrays and binding studies with biological analytes while providing the reader with a broad description of microarray technology tools and their potential applications. The first volume deals with methods and protocols for the preparation of microarrays. The second volume details applications and data analysis, which is important in analyzing the enormous data coming out of microarray experiments. Among the topics discussed in Volume 1: Synthesis Methods, are matrices in the synthesis of microarrays, array optimization processes, array-based comparative genomic hybridization, 60-mer oligonucleotide probes, bifunctional reagents NTMTA and NTPAC, and high density arrays using digital microarray synthesis platforms. Other topics include multiplex ligation-dependent probe amplification (MLPA), hybridization conditions in situ-synthesized oligo arrays, peptide arrays, high density replication tools (HDRT), protocols for the quantification of oligo hybridization, glyco-bead arrays, and an investigation into the emerging nano technology. Microarray Technology, Volumes 1 and 2, provide ample information to all levels of scientists from novice to those intimately familiar with array technology.

Applying Genomic and Proteomic Microarray Technology in Drug Discovery

Author : Robert S. Matson
Publisher : CRC Press
ISBN 13 : 1439855641
Total Pages : 313 pages
Book Rating : 4.4/5 (398 download)

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Book Synopsis Applying Genomic and Proteomic Microarray Technology in Drug Discovery by : Robert S. Matson

Download or read book Applying Genomic and Proteomic Microarray Technology in Drug Discovery written by Robert S. Matson and published by CRC Press. This book was released on 2013-03-13 with total page 313 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microarrays play an increasingly significant role in drug discovery. The commercial landscape has changed dramatically over the past few years and researchers have made great advancements with regard to construction and use. Now in its second edition, Applying Genomic and Proteomic Microarray Technology in Drug Discovery highlights, describes, and

Exploration and Analysis of DNA Microarray and Protein Array Data

Author : Dhammika Amaratunga
Publisher : John Wiley & Sons
ISBN 13 : 0470317965
Total Pages : 270 pages
Book Rating : 4.4/5 (73 download)

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Book Synopsis Exploration and Analysis of DNA Microarray and Protein Array Data by : Dhammika Amaratunga

Download or read book Exploration and Analysis of DNA Microarray and Protein Array Data written by Dhammika Amaratunga and published by John Wiley & Sons. This book was released on 2009-09-25 with total page 270 pages. Available in PDF, EPUB and Kindle. Book excerpt: A cutting-edge guide to the analysis of DNA microarray data Genomics is one of the major scientific revolutions of this century, and the use of microarrays to rapidly analyze numerous DNA samples has enabled scientists to make sense of mountains of genomic data through statistical analysis. Today, microarrays are being used in biomedical research to study such vital areas as a drug’s therapeutic value–or toxicity–and cancer-spreading patterns of gene activity. Exploration and Analysis of DNA Microarray and Protein Array Data answers the need for a comprehensive, cutting-edge overview of this important and emerging field. The authors, seasoned researchers with extensive experience in both industry and academia, effectively outline all phases of this revolutionary analytical technique, from the preprocessing to the analysis stage. Highlights of the text include: A review of basic molecular biology, followed by an introduction to microarrays and their preparation Chapters on processing scanned images and preprocessing microarray data Methods for identifying differentially expressed genes in comparative microarray experiments Discussions of gene and sample clustering and class prediction Extension of analysis methods to protein array data Numerous exercises for self-study as well as data sets and a useful collection of computational tools on the authors’ Web site make this important text a valuable resource for both students and professionals in the field.