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Microbial Community Modeling Prediction Of Microbial Interactions And Community Dynamics
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Book Synopsis Microbial Community Modeling: Prediction of Microbial Interactions and Community Dynamics by : Hyun-Seob Song
Download or read book Microbial Community Modeling: Prediction of Microbial Interactions and Community Dynamics written by Hyun-Seob Song and published by MDPI. This book was released on 2018-07-04 with total page 295 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is a printed edition of the Special Issue "Microbial Community Modeling: Prediction of Microbial Interactions and Community Dynamics" that was published in Processes
Book Synopsis Microbial Community Modeling: Prediction of Microbial Interactions and Community Dynamics by : Hyun-Seob Song
Download or read book Microbial Community Modeling: Prediction of Microbial Interactions and Community Dynamics written by Hyun-Seob Song and published by . This book was released on 2018 with total page 1 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microbial Community Modeling: Prediction of Microbial Interactions and Community Dynamics.
Book Synopsis Microbial Community Modeling: Prediction of Microbial Interactions and Community Dynamics by : Hyun-Seob Song (Ed.)
Download or read book Microbial Community Modeling: Prediction of Microbial Interactions and Community Dynamics written by Hyun-Seob Song (Ed.) and published by . This book was released on with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Systems-Level Modelling of Microbial Communities by : Aarthi Ravikrishnan
Download or read book Systems-Level Modelling of Microbial Communities written by Aarthi Ravikrishnan and published by CRC Press. This book was released on 2018-09-06 with total page 88 pages. Available in PDF, EPUB and Kindle. Book excerpt: Systems-Level Modelling of Microbial Communities: Theory and Practice introduces various aspects of modelling microbial communities and presents a detailed overview of the computational methods which have been developed in this area. This book is aimed at researchers in the field of computational/systems biology as well as biologists/experimentalists studying microbial communities, who are keen on embracing the concepts of computational modelling. The primary focus of this book is on methods for modelling interactions between micro-organisms in a community, with special emphasis on constraint-based and network-based modelling techniques. A brief overview of population- and agent-based modelling is also presented. Lastly, it covers the experimental methods to understand microbial communities, and provides an outlook on how the field may evolve in the coming years.
Book Synopsis The Social Biology of Microbial Communities by : Institute of Medicine
Download or read book The Social Biology of Microbial Communities written by Institute of Medicine and published by National Academies Press. This book was released on 2013-01-10 with total page 633 pages. Available in PDF, EPUB and Kindle. Book excerpt: Beginning with the germ theory of disease in the 19th century and extending through most of the 20th century, microbes were believed to live their lives as solitary, unicellular, disease-causing organisms . This perception stemmed from the focus of most investigators on organisms that could be grown in the laboratory as cellular monocultures, often dispersed in liquid, and under ambient conditions of temperature, lighting, and humidity. Most such inquiries were designed to identify microbial pathogens by satisfying Koch's postulates.3 This pathogen-centric approach to the study of microorganisms produced a metaphorical "war" against these microbial invaders waged with antibiotic therapies, while simultaneously obscuring the dynamic relationships that exist among and between host organisms and their associated microorganisms-only a tiny fraction of which act as pathogens. Despite their obvious importance, very little is actually known about the processes and factors that influence the assembly, function, and stability of microbial communities. Gaining this knowledge will require a seismic shift away from the study of individual microbes in isolation to inquiries into the nature of diverse and often complex microbial communities, the forces that shape them, and their relationships with other communities and organisms, including their multicellular hosts. On March 6 and 7, 2012, the Institute of Medicine's (IOM's) Forum on Microbial Threats hosted a public workshop to explore the emerging science of the "social biology" of microbial communities. Workshop presentations and discussions embraced a wide spectrum of topics, experimental systems, and theoretical perspectives representative of the current, multifaceted exploration of the microbial frontier. Participants discussed ecological, evolutionary, and genetic factors contributing to the assembly, function, and stability of microbial communities; how microbial communities adapt and respond to environmental stimuli; theoretical and experimental approaches to advance this nascent field; and potential applications of knowledge gained from the study of microbial communities for the improvement of human, animal, plant, and ecosystem health and toward a deeper understanding of microbial diversity and evolution. The Social Biology of Microbial Communities: Workshop Summary further explains the happenings of the workshop.
Book Synopsis Biogeochemical Cycles by : Katerina Dontsova
Download or read book Biogeochemical Cycles written by Katerina Dontsova and published by John Wiley & Sons. This book was released on 2020-04-14 with total page 336 pages. Available in PDF, EPUB and Kindle. Book excerpt: Elements move through Earth's critical zone along interconnected pathways that are strongly influenced by fluctuations in water and energy. The biogeochemical cycling of elements is inextricably linked to changes in climate and ecological disturbances, both natural and man-made. Biogeochemical Cycles: Ecological Drivers and Environmental Impact examines the influences and effects of biogeochemical elemental cycles in different ecosystems in the critical zone. Volume highlights include: Impact of global change on the biogeochemical functioning of diverse ecosystems Biological drivers of soil, rock, and mineral weathering Natural elemental sources for improving sustainability of ecosystems Links between natural ecosystems and managed agricultural systems Non-carbon elemental cycles affected by climate change Subsystems particularly vulnerable to global change The American Geophysical Union promotes discovery in Earth and space science for the benefit of humanity. Its publications disseminate scientific knowledge and provide resources for researchers, students, and professionals. Book Review: http://www.elementsmagazine.org/archives/e16_6/e16_6_dep_bookreview.pdf
Book Synopsis Emerging Areas in Bioengineering by : Ho Nam Chang
Download or read book Emerging Areas in Bioengineering written by Ho Nam Chang and published by John Wiley & Sons. This book was released on 2018-03-12 with total page 898 pages. Available in PDF, EPUB and Kindle. Book excerpt: With more than 40 contributions from expert authors, this is an extensive overview of all important research topics in the field of bioengineering, including metabolic engineering, biotransformations and biomedical applications. Alongside several chapters dealing with biotransformations and biocatalysis, a whole section is devoted to biofuels and the utilization of biomass. Current perspectives on synthetic biology and metabolic engineering approaches are presented, involving such example organisms as Escherichia coli and Corynebacterium glutamicum, while a further section covers topics in biomedical engineering including drug delivery systems and biopharmaceuticals. The book concludes with chapters on computer-aided bioprocess engineering and systems biology. This is a part of the Advanced Biotechnology book series, covering all pertinent aspects of the field with each volume prepared by eminent scientists who are experts on the topic in question. Invaluable reading for biotechnologists and bioengineers, as well as those working in the chemical and pharmaceutical industries. Advanced Biotechnology Biotechnology is a broad, interdisciplinary field of science, combining biological sciences and relevant engineering disciplines, that is becoming increasingly important as it benefits the environment and society as a whole. Recent years have seen substantial advances in all areas of biotechnology, resulting in the emergence of brand new fields. To reflect this progress, Sang-Yup Lee (KAIST, South Korea), Jens Nielsen (Chalmers University, Sweden), and Gregory Stephanopoulos (MIT, USA) have joined forces as the editors of a new Wiley-VCH book series. Advanced Biotechnology will cover all pertinent aspects of the field and each volume will be prepared by eminent scientists who are experts on the topic in question.
Author :National Academies of Sciences, Engineering, and Medicine Publisher :National Academies Press ISBN 13 :0309449839 Total Pages :318 pages Book Rating :4.3/5 (94 download)
Book Synopsis Microbiomes of the Built Environment by : National Academies of Sciences, Engineering, and Medicine
Download or read book Microbiomes of the Built Environment written by National Academies of Sciences, Engineering, and Medicine and published by National Academies Press. This book was released on 2017-10-06 with total page 318 pages. Available in PDF, EPUB and Kindle. Book excerpt: People's desire to understand the environments in which they live is a natural one. People spend most of their time in spaces and structures designed, built, and managed by humans, and it is estimated that people in developed countries now spend 90 percent of their lives indoors. As people move from homes to workplaces, traveling in cars and on transit systems, microorganisms are continually with and around them. The human-associated microbes that are shed, along with the human behaviors that affect their transport and removal, make significant contributions to the diversity of the indoor microbiome. The characteristics of "healthy" indoor environments cannot yet be defined, nor do microbial, clinical, and building researchers yet understand how to modify features of indoor environmentsâ€"such as building ventilation systems and the chemistry of building materialsâ€"in ways that would have predictable impacts on microbial communities to promote health and prevent disease. The factors that affect the environments within buildings, the ways in which building characteristics influence the composition and function of indoor microbial communities, and the ways in which these microbial communities relate to human health and well-being are extraordinarily complex and can be explored only as a dynamic, interconnected ecosystem by engaging the fields of microbial biology and ecology, chemistry, building science, and human physiology. This report reviews what is known about the intersection of these disciplines, and how new tools may facilitate advances in understanding the ecosystem of built environments, indoor microbiomes, and effects on human health and well-being. It offers a research agenda to generate the information needed so that stakeholders with an interest in understanding the impacts of built environments will be able to make more informed decisions.
Book Synopsis Microbial Community Analysis by : Thomas E. Cloete
Download or read book Microbial Community Analysis written by Thomas E. Cloete and published by IWA Publishing. This book was released on 1997-01-01 with total page 108 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microbial Community Analysis surveys the vast amount of theoretical and practical knowledge on the design of biological treatment systems. It describes the different types of biological wastewater systems, the role of microbial diversity in these systems, and how this affects design and operation, methods for studying microbial community dynamics, and mathematical modelling of these systems. Contents Biological methods for the treatment of wastewaters Biodiversity and microbial interactions in the biodegradation of organic compounds Microbial population dynamics in biological wastewater treatment plants Molecular techniques for determining microbial community structures in activated sludge Principles in the modelling of biological wastewater treatment plants Practical considerations for the design of biological wastewater treatment systems Scientific and Technical Report No.5
Book Synopsis Aquatic Microbial Communities by : John Cairns
Download or read book Aquatic Microbial Communities written by John Cairns and published by . This book was released on 1977 with total page 720 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Systems biology and ecology of microbial mat communities by : Martin G. Klotz
Download or read book Systems biology and ecology of microbial mat communities written by Martin G. Klotz and published by Frontiers Media SA. This book was released on 2016-04-11 with total page 264 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microbial mat communities consist of dense populations of microorganisms embedded in exopolymers and/or biomineralized solid phases, and are often found in mm-cm thick assemblages, which can be stratified due to environmental gradients such as light, oxygen or sulfide. Microbial mat communities are commonly observed under extreme environmental conditions, deriving energy primarily from light and/or reduced chemicals to drive autotrophic fixation of carbon dioxide. Microbial mat ecosystems are regarded as living analogues of primordial systems on Earth, and they often form perennial structures with conspicuous stratifications of microbial populations that can be studied in situ under stable conditions for many years. Consequently, microbial mat communities are ideal natural laboratories and represent excellent model systems for studying microbial community structure and function, microbial dynamics and interactions, and discovery of new microorganisms with novel metabolic pathways potentially useful in future industrial and/or medical applications. Due to their relative simplicity and organization, microbial mat communities are often excellent testing grounds for new technologies in microbiology including micro-sensor analysis, stable isotope methodology and modern genomics. Integrative studies of microbial mat communities that combine modern biogeochemical and molecular biological methods with traditional microbiology, macro-ecological approaches, and community network modeling will provide new and detailed insights regarding the systems biology of microbial mats and the complex interplay among individual populations and their physicochemical environment. These processes ultimately control the biogeochemical cycling of energy and/or nutrients in microbial systems. Similarities in microbial community function across different types of communities from highly disparate environments may provide a deeper basis for understanding microbial community dynamics and the ecological role of specific microbial populations. Approaches and concepts developed in highly-constrained, relatively stable natural communities may also provide insights useful for studying and understanding more complex microbial communities.
Book Synopsis Systems Biology by : Bernhard Palsson
Download or read book Systems Biology written by Bernhard Palsson and published by Cambridge University Press. This book was released on 2015-01-26 with total page 551 pages. Available in PDF, EPUB and Kindle. Book excerpt: The first comprehensive single-authored textbook on genome-scale models and the bottom-up approach to systems biology.
Book Synopsis Self-Organization in Complex Ecosystems. (MPB-42) by : Ricard Solé
Download or read book Self-Organization in Complex Ecosystems. (MPB-42) written by Ricard Solé and published by Princeton University Press. This book was released on 2012-01-06 with total page 384 pages. Available in PDF, EPUB and Kindle. Book excerpt: Can physics be an appropriate framework for the understanding of ecological science? Most ecologists would probably agree that there is little relation between the complexity of natural ecosystems and the simplicity of any example derived from Newtonian physics. Though ecologists have long been interested in concepts originally developed by statistical physicists and later applied to explain everything from why stock markets crash to why rivers develop particular branching patterns, applying such concepts to ecosystems has remained a challenge. Self-Organization in Complex Ecosystems is the first book to clearly synthesize what we have learned about the usefulness of tools from statistical physics in ecology. Ricard Solé and Jordi Bascompte provide a comprehensive introduction to complex systems theory, and ask: do universal laws shape the structure of ecosystems, at least at some scales? They offer the most compelling array of theoretical evidence to date of the potential of nonlinear ecological interactions to generate nonrandom, self-organized patterns at all levels. Tackling classic ecological questions--from population dynamics to biodiversity to macroevolution--the book's novel presentation of theories and data shows the power of statistical physics and complexity in ecology. Self-Organization in Complex Ecosystems will be a staple resource for years to come for ecologists interested in complex systems theory as well as mathematicians and physicists interested in ecology.
Book Synopsis Reactive Transport Modeling by : Yitian Xiao
Download or read book Reactive Transport Modeling written by Yitian Xiao and published by John Wiley & Sons. This book was released on 2018-03-14 with total page 560 pages. Available in PDF, EPUB and Kindle. Book excerpt: Teaches the application of Reactive Transport Modeling (RTM) for subsurface systems in order to expedite the understanding of the behavior of complex geological systems This book lays out the basic principles and approaches of Reactive Transport Modeling (RTM) for surface and subsurface environments, presenting specific workflows and applications. The techniques discussed are being increasingly commonly used in a wide range of research fields, and the information provided covers fundamental theory, practical issues in running reactive transport models, and how to apply techniques in specific areas. The need for RTM in engineered facilities, such as nuclear waste repositories or CO2 storage sites, is ever increasing, because the prediction of the future evolution of these systems has become a legal obligation. With increasing recognition of the power of these approaches, and their widening adoption, comes responsibility to ensure appropriate application of available tools. This book aims to provide the requisite understanding of key aspects of RTM, and in doing so help identify and thus avoid potential pitfalls. Reactive Transport Modeling covers: the application of RTM for CO2 sequestration and geothermal energy development; reservoir quality prediction; modeling diagenesis; modeling geochemical processes in oil & gas production; modeling gas hydrate production; reactive transport in fractured and porous media; reactive transport studies for nuclear waste disposal; reactive flow modeling in hydrothermal systems; and modeling biogeochemical processes. Key features include: A comprehensive reference for scientists and practitioners entering the area of reactive transport modeling (RTM) Presented by internationally known experts in the field Covers fundamental theory, practical issues in running reactive transport models, and hands-on examples for applying techniques in specific areas Teaches readers to appreciate the power of RTM and to stimulate usage and application Reactive Transport Modeling is written for graduate students and researchers in academia, government laboratories, and industry who are interested in applying reactive transport modeling to the topic of their research. The book will also appeal to geochemists, hydrogeologists, geophysicists, earth scientists, environmental engineers, and environmental chemists.
Book Synopsis Manual of Industrial Microbiology and Biotechnology by : Arnold L. Demain
Download or read book Manual of Industrial Microbiology and Biotechnology written by Arnold L. Demain and published by . This book was released on 1999 with total page 854 pages. Available in PDF, EPUB and Kindle. Book excerpt: The editors have enlisted a broad range of experts, including microbial ecologists, physiologists, geneticists, biochemists, molecular biologists, and biochemical engineers, who offer practical experience not found in texts and journals. This comprehensive perspective makes MIMB a valuable "how to" resource, the structure of which resembles the sequence of operation involved in the development of a commercial biological process and product.
Book Synopsis The Unified Neutral Theory of Biodiversity and Biogeography (MPB-32) by : Stephen P. Hubbell
Download or read book The Unified Neutral Theory of Biodiversity and Biogeography (MPB-32) written by Stephen P. Hubbell and published by Princeton University Press. This book was released on 2011-06-27 with total page 390 pages. Available in PDF, EPUB and Kindle. Book excerpt: Despite its supreme importance and the threat of its global crash, biodiversity remains poorly understood both empirically and theoretically. This ambitious book presents a new, general neutral theory to explain the origin, maintenance, and loss of biodiversity in a biogeographic context. Until now biogeography (the study of the geographic distribution of species) and biodiversity (the study of species richness and relative species abundance) have had largely disjunct intellectual histories. In this book, Stephen Hubbell develops a formal mathematical theory that unifies these two fields. When a speciation process is incorporated into Robert H. MacArthur and Edward O. Wilson's now classical theory of island biogeography, the generalized theory predicts the existence of a universal, dimensionless biodiversity number. In the theory, this fundamental biodiversity number, together with the migration or dispersal rate, completely determines the steady-state distribution of species richness and relative species abundance on local to large geographic spatial scales and short-term to evolutionary time scales. Although neutral, Hubbell's theory is nevertheless able to generate many nonobvious, testable, and remarkably accurate quantitative predictions about biodiversity and biogeography. In many ways Hubbell's theory is the ecological analog to the neutral theory of genetic drift in genetics. The unified neutral theory of biogeography and biodiversity should stimulate research in new theoretical and empirical directions by ecologists, evolutionary biologists, and biogeographers.
Book Synopsis Soil Carbon Storage by : Brajesh Singh
Download or read book Soil Carbon Storage written by Brajesh Singh and published by Academic Press. This book was released on 2018-04-12 with total page 340 pages. Available in PDF, EPUB and Kindle. Book excerpt: Soil Carbon Storage: Modulators, Mechanisms and Modeling takes a novel approach to the issue of soil carbon storage by considering soil C sequestration as a function of the interaction between biotic (e.g. microbes and plants) and abiotic (climate, soil types, management practices) modulators as a key driver of soil C. These modulators are central to C balance through their processing of C from both plant inputs and native soil organic matter. This book considers this concept in the light of state-of-the-art methodologies that elucidate these interactions and increase our understanding of a vitally important, but poorly characterized component of the global C cycle. The book provides soil scientists with a comprehensive, mechanistic, quantitative and predictive understanding of soil carbon storage. It presents a new framework that can be included in predictive models and management practices for better prediction and enhanced C storage in soils. Identifies management practices to enhance storage of soil C under different agro-ecosystems, soil types and climatic conditions Provides novel conceptual frameworks of biotic (especially microbial) and abiotic data to improve prediction of simulation model at plot to global scale Advances the conceptual framework needed to support robust predictive models and sustainable land management practices
