Integrated Population Models

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Integrated Population Models

Author : Michael Schaub
Publisher : Academic Press
ISBN 13 : 0128209151
Total Pages : 640 pages
Book Rating : 4.1/5 (282 download)

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Book Synopsis Integrated Population Models by : Michael Schaub

Download or read book Integrated Population Models written by Michael Schaub and published by Academic Press. This book was released on 2021-11-12 with total page 640 pages. Available in PDF, EPUB and Kindle. Book excerpt: Integrated Population Models: Theory and Ecological Applications with R and JAGS is the first book on integrated population models, which constitute a powerful framework for combining multiple data sets from the population and the individual levels to estimate demographic parameters, and population size and trends. These models identify drivers of population dynamics and forecast the composition and trajectory of a population. Written by two population ecologists with expertise on integrated population modeling, this book provides a comprehensive synthesis of the relevant theory of integrated population models with an extensive overview of practical applications, using Bayesian methods by means of case studies. The book contains fully-documented, complete code for fitting all models in the free software, R and JAGS. It also includes all required code for pre- and post-model-fitting analysis. Integrated Population Models is an invaluable reference for researchers and practitioners involved in population analysis, and for graduate-level students in ecology, conservation biology, wildlife management, and related fields. The text is ideal for self-study and advanced graduate-level courses. Offers practical and accessible ecological applications of IPMs (integrated population models) Provides full documentation of analyzed code in the Bayesian framework Written and structured for an easy approach to the subject, especially for non-statisticians

Integrated Population Models

Author : Michael Schaub
Publisher : Elsevier
ISBN 13 : 0323908101
Total Pages : 638 pages
Book Rating : 4.3/5 (239 download)

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Book Synopsis Integrated Population Models by : Michael Schaub

Download or read book Integrated Population Models written by Michael Schaub and published by Elsevier. This book was released on 2021-11-16 with total page 638 pages. Available in PDF, EPUB and Kindle. Book excerpt: Integrated Population Models: Theory and Ecological Applications with R and JAGS is the first book on integrated population models, which constitute a powerful framework for combining multiple data sets from the population and the individual levels to estimate demographic parameters, and population size and trends. These models identify drivers of population dynamics and forecast the composition and trajectory of a population. Written by two population ecologists with expertise on integrated population modeling, this book provides a comprehensive synthesis of the relevant theory of integrated population models with an extensive overview of practical applications, using Bayesian methods by means of case studies. The book contains fully-documented, complete code for fitting all models in the free software, R and JAGS. It also includes all required code for pre- and post-model-fitting analysis. Integrated Population Models is an invaluable reference for researchers and practitioners involved in population analysis, and for graduate-level students in ecology, conservation biology, wildlife management, and related fields. The text is ideal for self-study and advanced graduate-level courses. Offers practical and accessible ecological applications of IPMs (integrated population models) Provides full documentation of analyzed code in the Bayesian framework Written and structured for an easy approach to the subject, especially for non-statisticians

Modelling Population Dynamics

Author : K. B. Newman
Publisher : Springer
ISBN 13 : 1493909770
Total Pages : 223 pages
Book Rating : 4.4/5 (939 download)

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Book Synopsis Modelling Population Dynamics by : K. B. Newman

Download or read book Modelling Population Dynamics written by K. B. Newman and published by Springer. This book was released on 2014-07-16 with total page 223 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book gives a unifying framework for estimating the abundance of open populations: populations subject to births, deaths and movement, given imperfect measurements or samples of the populations. The focus is primarily on populations of vertebrates for which dynamics are typically modelled within the framework of an annual cycle, and for which stochastic variability in the demographic processes is usually modest. Discrete-time models are developed in which animals can be assigned to discrete states such as age class, gender, maturity, population (within a metapopulation), or species (for multi-species models). The book goes well beyond estimation of abundance, allowing inference on underlying population processes such as birth or recruitment, survival and movement. This requires the formulation and fitting of population dynamics models. The resulting fitted models yield both estimates of abundance and estimates of parameters characterizing the underlying processes.

Bayesian Population Analysis Using WinBUGS

Author : Marc Kéry
Publisher : Academic Press
ISBN 13 : 0123870208
Total Pages : 556 pages
Book Rating : 4.1/5 (238 download)

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Book Synopsis Bayesian Population Analysis Using WinBUGS by : Marc Kéry

Download or read book Bayesian Population Analysis Using WinBUGS written by Marc Kéry and published by Academic Press. This book was released on 2012 with total page 556 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bayesian statistics has exploded into biology and its sub-disciplines, such as ecology, over the past decade. The free software program WinBUGS, and its open-source sister OpenBugs, is currently the only flexible and general-purpose program available with which the average ecologist can conduct standard and non-standard Bayesian statistics. Comprehensive and richly commented examples illustrate a wide range of models that are most relevant to the research of a modern population ecologist All WinBUGS/OpenBUGS analyses are completely integrated in software R Includes complete documentation of all R and WinBUGS code required to conduct analyses and shows all the necessary steps from having the data in a text file out of Excel to interpreting and processing the output from WinBUGS in R

Population Ecology in Practice

Author : Dennis L. Murray
Publisher : John Wiley & Sons
ISBN 13 : 0470674148
Total Pages : 448 pages
Book Rating : 4.4/5 (76 download)

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Book Synopsis Population Ecology in Practice by : Dennis L. Murray

Download or read book Population Ecology in Practice written by Dennis L. Murray and published by John Wiley & Sons. This book was released on 2020-02-10 with total page 448 pages. Available in PDF, EPUB and Kindle. Book excerpt: A synthesis of contemporary analytical and modeling approaches in population ecology The book provides an overview of the key analytical approaches that are currently used in demographic, genetic, and spatial analyses in population ecology. The chapters present current problems, introduce advances in analytical methods and models, and demonstrate the applications of quantitative methods to ecological data. The book covers new tools for designing robust field studies; estimation of abundance and demographic rates; matrix population models and analyses of population dynamics; and current approaches for genetic and spatial analysis. Each chapter is illustrated by empirical examples based on real datasets, with a companion website that offers online exercises and examples of computer code in the R statistical software platform. Fills a niche for a book that emphasizes applied aspects of population analysis Covers many of the current methods being used to analyse population dynamics and structure Illustrates the application of specific analytical methods through worked examples based on real datasets Offers readers the opportunity to work through examples or adapt the routines to their own datasets using computer code in the R statistical platform Population Ecology in Practice is an excellent book for upper-level undergraduate and graduate students taking courses in population ecology or ecological statistics, as well as established researchers needing a desktop reference for contemporary methods used to develop robust population assessments.

Demographic Methods Across the Tree of Life

Author : Roberto Salguero-Gomez
Publisher : Oxford University Press
ISBN 13 : 0198838603
Total Pages : 401 pages
Book Rating : 4.1/5 (988 download)

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Book Synopsis Demographic Methods Across the Tree of Life by : Roberto Salguero-Gomez

Download or read book Demographic Methods Across the Tree of Life written by Roberto Salguero-Gomez and published by Oxford University Press. This book was released on 2021 with total page 401 pages. Available in PDF, EPUB and Kindle. Book excerpt: Demography is everywhere in our lives: from birth to death. Indeed, the universal currencies of survival, development, reproduction, and recruitment shape the performance of all species, from microbes to humans. The number of techniques for demographic data acquisition and analyses across the entire tree of life (microbes, fungi, plants, and animals) has drastically increased in recent decades. These developments have been partially facilitated by the advent of technologies such as GIS and drones, as well as analytical methods including Bayesian statistics and high-throughput molecular analyses. However, despite the universality of demography and the significant research potential that could emerge from unifying: (i) questions across taxa, (ii) data collection protocols, and (iii) analytical tools, demographic methods to date have remained taxonomically siloed and methodologically disintegrated. This is the first book to attempt a truly unified approach to demography and population ecology in order to address a wide range of questions in ecology, evolution, and conservation biology across the entire spectrum of life. This novel book provides the reader with the fundamentals of data collection, model construction, analyses, and interpretation across a wide repertoire of demographic techniques and protocols. It introduces the novice demographer to a broad range of demographic methods, including abundance-based models, life tables, matrix population models, integral projection models, integrated population models, individual based models, and more. Through the careful integration of data collection methods, analytical approaches, and applications, clearly guided throughout with fully reproducible R scripts, the book provides an up-to-date and authoritative overview of the most popular and effective demographic tools. Demographic Methods across the Tree of Life is aimed at graduate students and professional researchers in the fields of demography, ecology, animal behaviour, genetics, evolutionary biology, mathematical biology, and wildlife management.

Bringing Bayesian Models to Life

Author : Mevin B. Hooten
Publisher : CRC Press
ISBN 13 : 0429513372
Total Pages : 591 pages
Book Rating : 4.4/5 (295 download)

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Book Synopsis Bringing Bayesian Models to Life by : Mevin B. Hooten

Download or read book Bringing Bayesian Models to Life written by Mevin B. Hooten and published by CRC Press. This book was released on 2019-05-15 with total page 591 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bringing Bayesian Models to Life empowers the reader to extend, enhance, and implement statistical models for ecological and environmental data analysis. We open the black box and show the reader how to connect modern statistical models to computer algorithms. These algorithms allow the user to fit models that answer their scientific questions without needing to rely on automated Bayesian software. We show how to handcraft statistical models that are useful in ecological and environmental science including: linear and generalized linear models, spatial and time series models, occupancy and capture-recapture models, animal movement models, spatio-temporal models, and integrated population-models. Features: R code implementing algorithms to fit Bayesian models using real and simulated data examples. A comprehensive review of statistical models commonly used in ecological and environmental science. Overview of Bayesian computational methods such as importance sampling, MCMC, and HMC. Derivations of the necessary components to construct statistical algorithms from scratch. Bringing Bayesian Models to Life contains a comprehensive treatment of models and associated algorithms for fitting the models to data. We provide detailed and annotated R code in each chapter and apply it to fit each model we present to either real or simulated data for instructional purposes. Our code shows how to create every result and figure in the book so that readers can use and modify it for their own analyses. We provide all code and data in an organized set of directories available at the authors' websites.

Ecological Models and Data in R

Author : Benjamin M. Bolker
Publisher : Princeton University Press
ISBN 13 : 0691125228
Total Pages : 408 pages
Book Rating : 4.6/5 (911 download)

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Book Synopsis Ecological Models and Data in R by : Benjamin M. Bolker

Download or read book Ecological Models and Data in R written by Benjamin M. Bolker and published by Princeton University Press. This book was released on 2008-07-21 with total page 408 pages. Available in PDF, EPUB and Kindle. Book excerpt: Introduction and background; Exploratory data analysis and graphics; Deterministic functions for ecological modeling; Probability and stochastic distributions for ecological modeling; Stochatsic simulation and power analysis; Likelihood and all that; Optimization and all that; Likelihood examples; Standar statistics revisited; Modeling variance; Dynamic models.

Population Parameters

Author : Hamish McCallum
Publisher : John Wiley & Sons
ISBN 13 : 0470757426
Total Pages : 360 pages
Book Rating : 4.4/5 (77 download)

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Book Synopsis Population Parameters by : Hamish McCallum

Download or read book Population Parameters written by Hamish McCallum and published by John Wiley & Sons. This book was released on 2008-04-15 with total page 360 pages. Available in PDF, EPUB and Kindle. Book excerpt: Ecologists and environmental managers rely on mathematical models, both to understand ecological systems and to predict future system behavior. In turn, models rely on appropriate estimates of their parameters. This book brings together a diverse and scattered literature, to provide clear guidance on how to estimate parameters for models of animal populations. It is not a recipe book of statistical procedures. Instead, it concentrates on how to select the best approach to parameter estimation for a particular problem, and how to ensure that the quality estimated is the appropriate one for the specific purpose of the modelling exercise. Commencing with a toolbox of useful generic approaches to parameter estimation, the book deals with methods for estimating parameters for single populations. These parameters include population size, birth and death rates, and the population growth rate. For such parameters, rigorous statistical theory has been developed, and software is readily available. The problem is to select the optimal sampling design and method of analysis. The second part of the book deals with parameters that describe spatial dynamics, and ecological interactions such as competition, predation and parasitism. Here the principle problems are designing appropriate experiments and ensuring that the quantities measured by the experiments are relevant to the ecological models in which they will be used. This book will be essential reading for ecological researchers, postgraduate students and environmental managers who need to address an ecological problem through a population model. It is accessible to anyone with an understanding of basic statistical methods and population ecology. Unique in concentrating on parameter estimation within modelling. Fills a glaring gap in the literature. Not too technical, so suitable for the statistically inept. Methods explained in algebra, but also in worked examples using commonly available computer packages (SAS, GLIM, and some more specialised packages where relvant). Some spreadsheet based examples also included.

Integrated Population Biology and Modeling, Part A

Author :
Publisher : North Holland
ISBN 13 : 9780444640727
Total Pages : 0 pages
Book Rating : 4.6/5 (47 download)

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Book Synopsis Integrated Population Biology and Modeling, Part A by :

Download or read book Integrated Population Biology and Modeling, Part A written by and published by North Holland. This book was released on 2018-09-28 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Integrated Population Biology and Modeling: Part A offers very complex and precise realities of quantifying modern and traditional methods of understanding populations and population dynamics. Chapters cover emerging topics of note, including Longevity dynamics, Modeling human-environment interactions, Survival Probabilities from 5-Year Cumulative Life Table Survival Ratios (Tx+5/Tx): Some Innovative Methodological Investigations, Cell migration Models, Evolutionary Dynamics of Cancer Cells, an Integrated approach for modeling of coastal lagoons: A case for Chilka Lake, India, Population and metapopulation dynamics, Mortality analysis: measures and models, Stationary Population Models, Are there biological and social limits to human longevity?, Probability models in biology, Stochastic Models in Population Biology, and more.

Cities Transformed

Author : Mark R. Montgomery
Publisher : Routledge
ISBN 13 : 1134031661
Total Pages : 553 pages
Book Rating : 4.1/5 (34 download)

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Book Synopsis Cities Transformed by : Mark R. Montgomery

Download or read book Cities Transformed written by Mark R. Montgomery and published by Routledge. This book was released on 2013-10-31 with total page 553 pages. Available in PDF, EPUB and Kindle. Book excerpt: Over the next 20 years, most low-income countries will, for the first time, become more urban than rural. Understanding demographic trends in the cities of the developing world is critical to those countries - their societies, economies, and environments. The benefits from urbanization cannot be overlooked, but the speed and sheer scale of this transformation presents many challenges. In this uniquely thorough and authoritative volume, 16 of the world's leading scholars on urban population and development have worked together to produce the most comprehensive and detailed analysis of the changes taking place in cities and their implications and impacts. They focus on population dynamics, social and economic differentiation, fertility and reproductive health, mortality and morbidity, labor force, and urban governance. As many national governments decentralize and devolve their functions, the nature of urban management and governance is undergoing fundamental transformation, with programs in poverty alleviation, health, education, and public services increasingly being deposited in the hands of untested municipal and regional governments. Cities Transformed identifies a new class of policy maker emerging to take up the growing responsibilities. Drawing from a wide variety of data sources, many of them previously inaccessible, this essential text will become the benchmark for all involved in city-level research, policy, planning, and investment decisions. The National Research Council is a private, non-profit institution based in Washington, DC, providing services to the US government, the public, and the scientific and engineering communities. The editors are members of the Council's Panel on Urban Population Dynamics.

Models for Planning Wildlife Conservation in Large Landscapes

Author : Joshua Millspaugh
Publisher : Academic Press
ISBN 13 : 9780080920160
Total Pages : 720 pages
Book Rating : 4.9/5 (21 download)

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Book Synopsis Models for Planning Wildlife Conservation in Large Landscapes by : Joshua Millspaugh

Download or read book Models for Planning Wildlife Conservation in Large Landscapes written by Joshua Millspaugh and published by Academic Press. This book was released on 2011-04-28 with total page 720 pages. Available in PDF, EPUB and Kindle. Book excerpt: A single-resource volume of information on the most current and effective techniques of wildlife modeling, Models for Planning Wildlife Conservation in Large Landscapes is appropriate for students and researchers alike. The unique blend of conceptual, methodological, and application chapters discusses research, applications and concepts of modeling and presents new ideas and strategies for wildlife habitat models used in conservation planning. The book makes important contributions to wildlife conservation of animals in several ways: (1) it highlights historical and contemporary advancements in the development of wildlife habitat models and their implementation in conservation planning; (2) it provides practical advice for the ecologist conducting such studies; and (3) it supplies directions for future research including new strategies for successful studies. Intended to provide a recipe for successful development of wildlife habitat models and their implementation in conservation planning, the book could be used in studying wildlife habitat models, conservation planning, and management techniques. Additionally it may be a supplemental text in courses dealing with quantitative assessment of wildlife populations. Additionally, the length of the book would be ideal for graduate student seminar course. Using wildlife habitat models in conservation planning is of considerable interest to wildlife biologists. With ever tightening budgets for wildlife research and planning activities, there is a growing need to use computer methods. Use of simulation models represents the single best alternative. However, it is imperative that these techniques be described in a single source. Moreover, biologists should be made aware of alternative modeling techniques. It is also important that practical guidance be provided to biologists along with a demonstration of utility of these procedures. Currently there is little guidance in the wildlife or natural resource planning literature on how best to incorporate wildlife planning activities, particularly community-based approaches. Now is the perfect time for a synthestic publication that clearly outlines the concepts and available methods, and illustrates them. Only single resource book of information not only on various wildlife modeling techniques, but also with practical guidance on the demonstrated utility of each based on real-world conditions. Provides concepts, methods and applications for wildlife ecologists and others within a GIS context. Written by a team of subject-area experts

Wildlife 2001: Populations

Author : D.R. McCullough
Publisher : Springer Science & Business Media
ISBN 13 : 9401128685
Total Pages : 1156 pages
Book Rating : 4.4/5 (11 download)

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Book Synopsis Wildlife 2001: Populations by : D.R. McCullough

Download or read book Wildlife 2001: Populations written by D.R. McCullough and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 1156 pages. Available in PDF, EPUB and Kindle. Book excerpt: In 1984, a conference called Wildlife 2000: Modeling habitat relationships of terrestrial vertebrates, was held at Stanford Sierra Camp at Fallen Leaf Lake in the Sierra Nevada Mountains of California. The conference was well-received, and the published volume (Verner, J. , M. L. Morrison, and C. J. Ralph, editors. 1986. Wildlife 2000: modeling habitat relationships of terrestrial vertebrates, University of Wisconsin Press, Madison, Wisconsin, USA) proved to be a landmark publication that received a book award by The Wildlife Society. Wildlife 2001: populations was a followup conference with emphasis on the other major biological field of wildlife conservation and management, populations. It was held on July 29-31, 1991, at the Oakland Airport Hilton Hotel in Oakland, California, in accordance with our intent that this conference have a much stronger international representation than did Wildlife 2000. The goal of the conference was to bring together an international group of specialists to address the state of the art in wildlife population dynamics, and set the agenda for future research and management on the threshold of the 21st century. The mix of specialists included workers in theoretical, as well as practical, aspects of wildlife conservation and management. Three general sessions covered methods, modelling, and conservation of threatened species.

An Integrative Metaregression Framework for Descriptive Epidemiology

Author : Abraham D. Flaxman
Publisher :
ISBN 13 : 9780295991849
Total Pages : 0 pages
Book Rating : 4.9/5 (918 download)

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Book Synopsis An Integrative Metaregression Framework for Descriptive Epidemiology by : Abraham D. Flaxman

Download or read book An Integrative Metaregression Framework for Descriptive Epidemiology written by Abraham D. Flaxman and published by . This book was released on 2015 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: To provide the tools and knowledge needed in efforts to improve the health of the world's populations, researchers collaborated on the Global Burden of Diseases, Injuries, and Risk Factors Study 2010. The study produced comprehensive estimates of over 200 diseases and health risk factors in 187 countries over two decades, results that will be used by governments and non-governmental agencies to inform priorities for global health research, policies, and funding. Integrated Meta-Regression Framework for Descriptive Epidemiology is the first book-length treatment of model-based meta-analytic methods for descriptive epidemiology used in the Global Burden of Disease Study 2010. In addition to collecting the prior work on compartmental modeling of disease, this book significantly extends the model, by formally connecting the system dynamics model of disease progression to a statistical model of epidemiological rates and demonstrates how the two models were combined to allow researchers to integrate relevant data. Practical applications of the model to meta-analysis of more than a dozen different diseases complement the theoretical foundations of the integrative systems modeling of disease in populations. The book concludes with a detailed description of the future directions for research in model-based meta-analysis of descriptive epidemiological data. Abraham Flaxman is assistant professor of global health in the Institute for Health Metrics and Evaluation at the University of Washington.

Population Biology

Author : Alan Hastings
Publisher : Springer Science & Business Media
ISBN 13 : 1475727313
Total Pages : 228 pages
Book Rating : 4.4/5 (757 download)

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Book Synopsis Population Biology by : Alan Hastings

Download or read book Population Biology written by Alan Hastings and published by Springer Science & Business Media. This book was released on 2013-03-14 with total page 228 pages. Available in PDF, EPUB and Kindle. Book excerpt: Population biology has been investigated quantitatively for many decades, resulting in a rich body of scientific literature. Ecologists often avoid this literature, put off by its apparently formidable mathematics. This textbook provides an introduction to the biology and ecology of populations by emphasizing the roles of simple mathematical models in explaining the growth and behavior of populations. The author only assumes acquaintance with elementary calculus, and provides tutorial explanations where needed to develop mathematical concepts. Examples, problems, extensive marginal notes and numerous graphs enhance the book's value to students in classes ranging from population biology and population ecology to mathematical biology and mathematical ecology. The book will also be useful as a supplement to introductory courses in ecology.

Neuronal Dynamics

Author : Wulfram Gerstner
Publisher : Cambridge University Press
ISBN 13 : 1107060834
Total Pages : 591 pages
Book Rating : 4.1/5 (7 download)

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Book Synopsis Neuronal Dynamics by : Wulfram Gerstner

Download or read book Neuronal Dynamics written by Wulfram Gerstner and published by Cambridge University Press. This book was released on 2014-07-24 with total page 591 pages. Available in PDF, EPUB and Kindle. Book excerpt: This solid introduction uses the principles of physics and the tools of mathematics to approach fundamental questions of neuroscience.

Towards Bayesian Model-Based Demography

Author : Jakub Bijak
Publisher : Springer Nature
ISBN 13 : 303083039X
Total Pages : 277 pages
Book Rating : 4.0/5 (38 download)

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Book Synopsis Towards Bayesian Model-Based Demography by : Jakub Bijak

Download or read book Towards Bayesian Model-Based Demography written by Jakub Bijak and published by Springer Nature. This book was released on 2021-12-09 with total page 277 pages. Available in PDF, EPUB and Kindle. Book excerpt: This open access book presents a ground-breaking approach to developing micro-foundations for demography and migration studies. It offers a unique and novel methodology for creating empirically grounded agent-based models of international migration – one of the most uncertain population processes and a top-priority policy area. The book discusses in detail the process of building a simulation model of migration, based on a population of intelligent, cognitive agents, their networks and institutions, all interacting with one another. The proposed model-based approach integrates behavioural and social theory with formal modelling, by embedding the interdisciplinary modelling process within a wider inductive framework based on the Bayesian statistical reasoning. Principles of uncertainty quantification are used to devise innovative computer-based simulations, and to learn about modelling the simulated individuals and the way they make decisions. The identified knowledge gaps are subsequently filled with information from dedicated laboratory experiments on cognitive aspects of human decision-making under uncertainty. In this way, the models are built iteratively, from the bottom up, filling an important epistemological gap in migration studies, and social sciences more broadly.