Handbook of Molecular Microbial Ecology II

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Author :
Publisher : John Wiley & Sons
ISBN 13 : 0470647191
Total Pages : 632 pages
Book Rating : 4.4/5 (76 download)

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Book Synopsis Handbook of Molecular Microbial Ecology II by : Frans J. de Bruijn

Download or read book Handbook of Molecular Microbial Ecology II written by Frans J. de Bruijn and published by John Wiley & Sons. This book was released on 2011-09-27 with total page 632 pages. Available in PDF, EPUB and Kindle. Book excerpt: The premiere two-volume reference on revelations from studying complex microbial communities in many distinct habitats Metagenomics is an emerging field that has changed the way microbiologists study microorganisms. It involves the genomic analysis of microorganisms by extraction and cloning of DNA from a group of microorganisms, or the direct use of the purified DNA or RNA for sequencing, which allows scientists to bypass the usual protocol of isolating and culturing individual microbial species. This method is now used in laboratories across the globe to study microorganism diversity and for isolating novel medical and industrial compounds. Handbook of Molecular Microbial Ecology is the first comprehensive two-volume reference to cover unculturable microorganisms in a large variety of habitats, which could not previously have been analyzed without metagenomic methodology. It features review articles as well as a large number of case studies, based largely on original publications and written by international experts. This second volume, Metagenomics in Different Habitats, covers such topics as: Viral genomes Metagenomics studies in a variety of habitats, including marine environments and lakes, soil, and human and animal digestive tracts Other habitats, including those involving microbiome diversity in human saliva and functional intestinal metagenomics; diversity of archaea in terrestrial hot springs; and microbial communities living at the surface of building stones Biodegradation Biocatalysts and natural products A special feature of this book is the highlighting of the databases and computer programs used in each study; they are listed along with their sites in order to facilitate the computer-assisted analysis of the vast amount of data generated by metagenomic studies. Such studies in a variety of habitats are described here, which present a large number of different system-dependent approaches in greatly differing habitats. Handbook of Molecular Microbial Ecology II is an invaluable reference for researchers in metagenomics, microbial ecology, microbiology, and environmental microbiology; those working on the Human Microbiome Project; microbial geneticists; and professionals in molecular microbiology and bioinformatics.

Molecular Microbial Ecology Manual

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Author :
Publisher : Springer Science & Business Media
ISBN 13 : 1402021763
Total Pages : 1760 pages
Book Rating : 4.4/5 (2 download)

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Book Synopsis Molecular Microbial Ecology Manual by : George A. Kowalchuk

Download or read book Molecular Microbial Ecology Manual written by George A. Kowalchuk and published by Springer Science & Business Media. This book was released on 2004-08-09 with total page 1760 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microbes are key drivers of the world's ecosystems. The vast majority of the world's diversity and metabolic potential lies within micro-organisms, yet we are just beginning to understand and utilize this ultimate resource of biological diversity. Critical to our exploration of the microbial world are methods that allow for the analysis of organisms that are invisible to our eyes, difficult to distinguish from each other, and often impossible to grow using available culture methods. The field of microbial ecology has been revolutionized in the past two decades by the introduction of molecular methods into the toolbox of the microbial ecologist. This molecular arsenal has helped to unveil the enormity of microbial diversity across the breadth of the earth's ecosystems, and has revealed that we are only familiar with a very small minority of the organisms that carry out key microbial functions in diverse habitats. The Molecular Microbial Ecology Manual, Second Edition (MMEM-II) provides a detailed and user-friendly description of the methods that have made this revolution in microbial ecology possible. However, what is perhaps most exciting about MMEM-II is that it contains a large number of new chapters, highlighting the newest trends in microbial ecology research, which seek to provide more quantitative and statistically robust data, and means of coupling microbial identity and function. In addition, the majority of the proven methods described in MMEM's first version have undergone significant revisions to provide the most up-to-date applications available. The state-of-the-art methods described in MMEM-II have not only been provided by experts in the field, but in most cases by the laboratories that actually first developed and applied the methods, thus providing the MMEM-II user with unique first-hand tips and insight. The new on-line format available forMMEM-II should also add to the utility of MMEM-II by allowing users to search for key topics throughout the manual, skip between interrelated chapters at the push of a button, and by providing immediate availability to protocol updates and new chapters dedicated to future technical developments.

Handbook of Molecular Microbial Ecology II

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Author :
Publisher : John Wiley & Sons
ISBN 13 : 1118010531
Total Pages : 632 pages
Book Rating : 4.1/5 (18 download)

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Book Synopsis Handbook of Molecular Microbial Ecology II by : Frans J. de Bruijn

Download or read book Handbook of Molecular Microbial Ecology II written by Frans J. de Bruijn and published by John Wiley & Sons. This book was released on 2011-10-14 with total page 632 pages. Available in PDF, EPUB and Kindle. Book excerpt: The premiere two-volume reference on revelations from studying complex microbial communities in many distinct habitats Metagenomics is an emerging field that has changed the way microbiologists study microorganisms. It involves the genomic analysis of microorganisms by extraction and cloning of DNA from a group of microorganisms, or the direct use of the purified DNA or RNA for sequencing, which allows scientists to bypass the usual protocol of isolating and culturing individual microbial species. This method is now used in laboratories across the globe to study microorganism diversity and for isolating novel medical and industrial compounds. Handbook of Molecular Microbial Ecology is the first comprehensive two-volume reference to cover unculturable microorganisms in a large variety of habitats, which could not previously have been analyzed without metagenomic methodology. It features review articles as well as a large number of case studies, based largely on original publications and written by international experts. This second volume, Metagenomics in Different Habitats, covers such topics as: Viral genomes Metagenomics studies in a variety of habitats, including marine environments and lakes, soil, and human and animal digestive tracts Other habitats, including those involving microbiome diversity in human saliva and functional intestinal metagenomics; diversity of archaea in terrestrial hot springs; and microbial communities living at the surface of building stones Biodegradation Biocatalysts and natural products A special feature of this book is the highlighting of the databases and computer programs used in each study; they are listed along with their sites in order to facilitate the computer-assisted analysis of the vast amount of data generated by metagenomic studies. Such studies in a variety of habitats are described here, which present a large number of different system-dependent approaches in greatly differing habitats. Handbook of Molecular Microbial Ecology II is an invaluable reference for researchers in metagenomics, microbial ecology, microbiology, and environmental microbiology; those working on the Human Microbiome Project; microbial geneticists; and professionals in molecular microbiology and bioinformatics.

Handbook of Molecular Microbial Ecology I

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Author :
Publisher : John Wiley & Sons
ISBN 13 : 1118010493
Total Pages : 1155 pages
Book Rating : 4.1/5 (18 download)

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Book Synopsis Handbook of Molecular Microbial Ecology I by : Frans J. de Bruijn

Download or read book Handbook of Molecular Microbial Ecology I written by Frans J. de Bruijn and published by John Wiley & Sons. This book was released on 2011-10-14 with total page 1155 pages. Available in PDF, EPUB and Kindle. Book excerpt: The premiere two-volume reference on revelations from studying complex microbial communities in many distinct habitats Metagenomics is an emerging field that has changed the way microbiologists study microorganisms. It involves the genomic analysis of microorganisms by extraction and cloning of DNA from a group of microorganisms, or the direct use of the purified DNA or RNA for sequencing, which allows scientists to bypass the usual protocol of isolating and culturing individual microbial species. This method is now used in laboratories across the globe to study microorganism diversity and for isolating novel medical and industrial compounds. Handbook of Molecular Microbial Ecology is the first comprehensive two-volume reference to cover unculturable microorganisms in a large variety of habitats, which could not previously have been analyzed without metagenomic methodology. It features review articles as well as a large number of case studies, based largely on original publications and written by international experts. This first volume, Metagenomics and Complementary Approaches, covers such topics as: Background information on DNA reassociation and use of 16 rRNA and other DNA fingerprinting approaches Species designation in microbiology Metagenomics: Introduction to the basic tools with examples Consortia and databases Bioinformatics Computer-assisted analysis Complementary approaches—microarrays, metatranscriptomics, metaproteomics, metabolomics, and single cell analysis A special feature of this volume is the highlighting of the databases and computer programs used in each study; they are listed along with their sites in order to facilitate the computer-assisted analysis of the vast amount of data generated by metagenomic studies. Handbook of Molecular Microbial Ecology I is an invaluable reference for researchers in metagenomics, microbiology, and environmental microbiology; those working on the Human Microbiome Project; microbial geneticists; molecular microbial ecologists; and professionals in molecular microbiology and bioinformatics.

Molecular Microbial Ecology Manual

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Author :
Publisher : Springer
ISBN 13 : 9400902158
Total Pages : 266 pages
Book Rating : 4.4/5 (9 download)

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Book Synopsis Molecular Microbial Ecology Manual by : Antoon D. L. Akkermans

Download or read book Molecular Microbial Ecology Manual written by Antoon D. L. Akkermans and published by Springer. This book was released on 2014-01-13 with total page 266 pages. Available in PDF, EPUB and Kindle. Book excerpt: For a long time microbial ecology has been developed as a distinct field within Ecology. In spite of the important role of microorganisms in the environment, this group of 'invisible' organisms remained unaccessable to other ecologists. Detection and identification of microorganisms remain largely dependent on isolation techniques and characterisation of pure cul tures. We now realise that only a minor fraction of the microbial com munity can be cultivated. As a result of the introduction of molecular methods, microbes can now be detected and identified at the DNA/RNA level in their natural environment. This has opened a new field in ecology: Molecular Microbial Ecology. In the present manual we aim to introduce the microbial ecologist to a selected number of current molecular techniques that are relevant in micro bial ecology. The first edition of the manual contains 33 chapters and an equal number of additional chapters will be added this year. Since the field of molecular ecology is in a continuous progress, we aim to update and extend the Manual regularly and will invite anyone to depo sit their new protocols in full detail in the next edition of this Manual. We hope this book finds its place where it was born: at the lab bench! Antoon D.L. Akkermans, Jan Dirk van Elsas and Frans J. de Bruijn March 1995 Molecular Microbial Ecology Manual 1.3.6: 1-8, 1996. © 1996 Kluwer Academic Publishers.

Handbook of Molecular Microbial Ecology

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Author :
Publisher : Delve Publishing
ISBN 13 : 9781680958270
Total Pages : 290 pages
Book Rating : 4.9/5 (582 download)

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Book Synopsis Handbook of Molecular Microbial Ecology by : Patricia Marques

Download or read book Handbook of Molecular Microbial Ecology written by Patricia Marques and published by Delve Publishing. This book was released on 2016-11-30 with total page 290 pages. Available in PDF, EPUB and Kindle. Book excerpt: The study of microbial ecology can help us improve our lives through the use of microbes in environmental restoration, food production, and bioengineering of useful products such as antibiotics, food supplements, and chemicals. This text offers an introduction to the subject.

Molecular Microbial Ecology Manual

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Publisher :
ISBN 13 :
Total Pages : 849 pages
Book Rating : 4.:/5 (835 download)

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Book Synopsis Molecular Microbial Ecology Manual by :

Download or read book Molecular Microbial Ecology Manual written by and published by . This book was released on 2004 with total page 849 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Molecular Microbial Ecology

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Author :
Publisher : Garland Science
ISBN 13 : 1135320403
Total Pages : 404 pages
Book Rating : 4.1/5 (353 download)

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Book Synopsis Molecular Microbial Ecology by : Mark Osborn

Download or read book Molecular Microbial Ecology written by Mark Osborn and published by Garland Science. This book was released on 2004-06-02 with total page 404 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microoganisms are distributed across every ecosystem, and microbial transformations are fundamental to the operation of the biosphere. Microbial ecology is the study of this interaction between microorganisms and their environment, and arguably represents one of the most important areas of biological research. Yet for many years our study of microbial flora was severely limited: the primary method of culturing microorganisms on media allowed us to study only between 0.1 and 10% of the total microbial flora in any given environment. Molecular Microbial Ecology gives a comprehensive guide to the recent revolution in the study of microorganisms in the environment. Details are given on molecular methods for isolating some of the previously uncultured and numerically dominant microbial groups. PCR-based approaches to studying prokaryotic systematics are described, including ribosomal RNA analysis and stable isotope probing. Later chapters cover DNA hybridisation techniques (including fluorescent in situ hybridisation), as well as genomic and metagenomic approaches to microbial ecology. Gathering together some of the world’s leading experts, this book provides an invaluable introduction to the modern theory and molecular methods used in studying microbial ecology.

Handbook of Methods in Aquatic Microbial Ecology

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Author :
Publisher : Routledge
ISBN 13 : 1351442368
Total Pages : 823 pages
Book Rating : 4.3/5 (514 download)

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Book Synopsis Handbook of Methods in Aquatic Microbial Ecology by : Paul F. Kemp

Download or read book Handbook of Methods in Aquatic Microbial Ecology written by Paul F. Kemp and published by Routledge. This book was released on 2018-05-02 with total page 823 pages. Available in PDF, EPUB and Kindle. Book excerpt: Handbook of Methods in Aquatic Microbial Ecology is the first comprehensive compilation of 85 fundamental methods in modern aquatic microbial ecology. Each method is presented in a detailed, step-by-step format that allows readers to adopt new methods with little difficulty. The methods represent the state of the art, and many have become standard procedures in microbial research and environmental assessment. The book also presents practical advice on how to apply the methods. It will be an indispensable reference for marine and freshwater research laboratories, environmental assessment laboratories, and industrial research labs concerned with microbial measurements in water.

CRC Handbook of Laboratory Model Systems for Microbial Ecosystems

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Publisher : CRC Press
ISBN 13 : 9780849329746
Total Pages : 292 pages
Book Rating : 4.3/5 (297 download)

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Book Synopsis CRC Handbook of Laboratory Model Systems for Microbial Ecosystems by : Julian W.T. Wimpenny

Download or read book CRC Handbook of Laboratory Model Systems for Microbial Ecosystems written by Julian W.T. Wimpenny and published by CRC Press. This book was released on 1988-10-31 with total page 292 pages. Available in PDF, EPUB and Kindle. Book excerpt: These volumes present the main classes of useful laboratory model systems used to study microbial ecosystems, with emphasis on the practical details for the use of each model. The most commonly used model, the homogeneous fermenter, is featured along with linked homogeneous culture systems, film fermenters, and percolating columns. Additionally, gel-stabilized culture systems which incorporate molecular diffusion as their main solute transfer mechanism and the microbial colony are explained. Chapters comparing model systems with "microcosms" are included, along with discussions of the value of computer models in microbial ecosystem research. Highlighted is a global discussion of the value of laboratory models in microbial ecology.

Molecular Microbial Ecology of the Rhizosphere, 2 Volume Set

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Publisher : Wiley-Blackwell
ISBN 13 : 9781118296172
Total Pages : 1328 pages
Book Rating : 4.2/5 (961 download)

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Book Synopsis Molecular Microbial Ecology of the Rhizosphere, 2 Volume Set by : Frans J. de Bruijn

Download or read book Molecular Microbial Ecology of the Rhizosphere, 2 Volume Set written by Frans J. de Bruijn and published by Wiley-Blackwell. This book was released on 2013-06-04 with total page 1328 pages. Available in PDF, EPUB and Kindle. Book excerpt: Molecular Microbial Ecology of the Rhizosphere covers current knowledge on the molecular basis of plant-microbe interactions in the rhizosphere. Also included in the book are both reviews and research-based chapters describing experimental materials and methods. Edited by a leader in the field, with contributions from authors around the world, Molecular Microbial Ecology of the Rhizosphere brings together the most up-to-date research in this expanding area, and will be a valuable resource for molecular microbiologists and plant soil scientists, as well as upper level students in microbiology, ecology, and agriculture.

Environmental Microbiology

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Publisher : John Wiley & Sons
ISBN 13 : 1118439635
Total Pages : 588 pages
Book Rating : 4.1/5 (184 download)

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Book Synopsis Environmental Microbiology by : Eugene L. Madsen

Download or read book Environmental Microbiology written by Eugene L. Madsen and published by John Wiley & Sons. This book was released on 2015-09-28 with total page 588 pages. Available in PDF, EPUB and Kindle. Book excerpt: New and expanded for its second edition, Environmental Microbiology: From Genomes to Biogeochemistry¸ Second Edition, is a timely update to a classic text filled with ideas, connections, and concepts that advance an in-depth understanding of this growing segment of microbiology. Core principles are highlighted with an emphasis on the logic of the science and new methods-driven discoveries. Numerous up-to-date examples and applications boxes provide tangible reinforcement of material covered. Study questions at the end of each chapter require students to utilize analytical and quantitative approaches, to define and defend arguments, and to apply microbiological paradigms to their personal interests. Essay assignments and related readings stimulate student inquiry and serve as focal points for teachers to launch classroom discussions. A companion website with downloadable artwork and answers to study questions is also available. Environmental Microbiology: From Genomes to Biogeochemistry, Second Edition, offers a coherent and comprehensive treatment of this dynamic, emerging field, building bridges between basic biology, evolution, genomics, ecology, biotechnology, climate change, and the environmental sciences.

Environmental DNA

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Publisher : Oxford University Press
ISBN 13 : 0198767226
Total Pages : 268 pages
Book Rating : 4.1/5 (987 download)

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Book Synopsis Environmental DNA by : Pierre Taberlet

Download or read book Environmental DNA written by Pierre Taberlet and published by Oxford University Press. This book was released on 2018 with total page 268 pages. Available in PDF, EPUB and Kindle. Book excerpt: Environmental DNA (eDNA) refers to DNA that can be extracted from environmental samples (such as soil, water, feces, or air) without the prior isolation of any target organism. The analysis of environmental DNA has the potential of providing high-throughput information on taxa and functionalgenes in a given environment, and is easily amenable to the study of both aquatic and terrestrial ecosystems. It can provide an understanding of past or present biological communities as well as their trophic relationships, and can thus offer useful insights into ecosystem functioning. There is nowa rapidly-growing interest amongst biologists in applying analysis of environmental DNA to their own research. However, good practices and protocols dealing with environmental DNA are currently widely dispersed across numerous papers, with many of them presenting only preliminary results and using adiversity of methods. In this context, the principal objective of this practical handbook is to provide biologists (both students and researchers) with the scientific background necessary to assist with the understanding and implementation of best practices and analyses based on environmentalDNA.

Manual of Environmental Microbiology

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Publisher : American Society for Microbiology Press
ISBN 13 : 1555813798
Total Pages : 3948 pages
Book Rating : 4.5/5 (558 download)

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Book Synopsis Manual of Environmental Microbiology by : Christon J. Hurst

Download or read book Manual of Environmental Microbiology written by Christon J. Hurst and published by American Society for Microbiology Press. This book was released on 2007-05-14 with total page 3948 pages. Available in PDF, EPUB and Kindle. Book excerpt: The most definitive manual of microbes in air, water, and soil and their impact on human health and welfare. • Incorporates a summary of the latest methodology used to study the activity and fate of microorganisms in various environments. • Synthesizes the latest information on the assessment of microbial presence and microbial activity in natural and artificial environments. • Features a section on biotransformation and biodegradation. • Serves as an indispensable reference for environmental microbiologists, microbial ecologists, and environmental engineers, as well as those interested in human diseases, water and wastewater treatment, and biotechnology.

Biological Nitrogen Fixation

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Publisher : John Wiley & Sons
ISBN 13 : 1118637216
Total Pages : 2250 pages
Book Rating : 4.1/5 (186 download)

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Book Synopsis Biological Nitrogen Fixation by : Frans J. de Bruijn

Download or read book Biological Nitrogen Fixation written by Frans J. de Bruijn and published by John Wiley & Sons. This book was released on 2015-06-16 with total page 2250 pages. Available in PDF, EPUB and Kindle. Book excerpt: Nitrogen is arguably the most important nutrient required by plants. However, the availability of nitrogen is limited in many soils and although the earth's atmosphere consists of 78.1% nitrogen gas (N2) plants are unable to use this form of nitrogen. To compensate , modern agriculture has been highly reliant on industrial nitrogen fertilizers to achieve maximum crop productivity. However, a great deal of fossil fuel is required for the production and delivery of nitrogen fertilizer. Moreover carbon dioxide (CO2) which is released during fossil fuel combustion contributes to the greenhouse effect and run off of nitrate leads to eutrophication of the waterways. Biological nitrogen fixation is an alternative to nitrogen fertilizer. It is carried out by prokaryotes using an enzyme complex called nitrogenase and results in atmospheric N2 being reduced into a form of nitrogen diazotrophic organisms and plants are able to use (ammonia). It is this process and its major players which will be discussed in this book. Biological Nitrogen Fixation is a comprehensive two volume work bringing together both review and original research articles on key topics in nitrogen fixation. Chapters across both volumes emphasize molecular techniques and advanced biochemical analysis approaches applicable to various aspects of biological nitrogen fixation. Volume 1 explores the chemistry and biochemistry of nitrogenases, nif gene regulation, the taxonomy, evolution, and genomics of nitrogen fixing organisms, as well as their physiology and metabolism. Volume 2 covers the symbiotic interaction of nitrogen fixing organisms with their host plants, including nodulation and symbiotic nitrogen fixation, plant and microbial "omics", cyanobacteria, diazotrophs and non-legumes, field studies and inoculum preparation, as well as nitrogen fixation and cereals. Covering the full breadth of current nitrogen fixation research and expanding it towards future advances in the field, Biological Nitrogen Fixation will be a one-stop reference for microbial ecologists and environmental microbiologists as well as plant and agricultural researchers working on crop sustainability.

RNA-Based Regulation in Human Health and Disease

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Publisher : Academic Press
ISBN 13 : 0128171944
Total Pages : 444 pages
Book Rating : 4.1/5 (281 download)

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Book Synopsis RNA-Based Regulation in Human Health and Disease by :

Download or read book RNA-Based Regulation in Human Health and Disease written by and published by Academic Press. This book was released on 2020-08-19 with total page 444 pages. Available in PDF, EPUB and Kindle. Book excerpt: RNA-based Regulation in Human Health and Disease offers an in-depth exploration of RNA mediated genome regulation at different hierarchies. Beginning with multitude of canonical and non-canonical RNA populations, especially noncoding RNA in human physiology and evolution, further sections examine the various classes of RNAs (from small to large noncoding and extracellular RNAs), functional categories of RNA regulation (RNA-binding proteins, alternative splicing, RNA editing, antisense transcripts and RNA G-quadruplexes), dynamic aspects of RNA regulation modulating physiological homeostasis (aging), role of RNA beyond humans, tools and technologies for RNA research (wet lab and computational) and future prospects for RNA-based diagnostics and therapeutics. One of the core strengths of the book includes spectrum of disease-specific chapters from experts in the field highlighting RNA-based regulation in metabolic & neurodegenerative disorders, cancer, inflammatory disease, viral and bacterial infections. We hope the book helps researchers, students and clinicians appreciate the role of RNA-based regulation in genome regulation, aiding the development of useful biomarkers for prognosis, diagnosis, and novel RNA-based therapeutics. Comprehensive information of non-canonical RNA-based genome regulation modulating human health and disease Defines RNA classes with special emphasis on unexplored world of noncoding RNA at different hierarchies Disease specific role of RNA - causal, prognostic, diagnostic and therapeutic Features contributions from leading experts in the field

Biology and Biotechnology of Patagonian Microorganisms

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Author :
Publisher : Springer
ISBN 13 : 3319428012
Total Pages : 360 pages
Book Rating : 4.3/5 (194 download)

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Book Synopsis Biology and Biotechnology of Patagonian Microorganisms by : Nelda Lila Olivera

Download or read book Biology and Biotechnology of Patagonian Microorganisms written by Nelda Lila Olivera and published by Springer. This book was released on 2016-11-24 with total page 360 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Argentinean Patagonia offers a great diversity of scarcely explored environments suitable for the bioprospection of biotechnological relevant microorganisms. This book provides readers with a concise and clearly illustrated treatment of outstanding topics of Patagonian microbiology and biotechnology. It covers a wide range of areas interesting to several audiences such as researchers, graduate students and professionals working on the industry food. Among the main topics we will discuss examples of environmental applications, such as heavy metal and hydrocarbon bioremediation, bioprospection of valuable molecules from extremophilic bacteria and yeasts, the use of Patagonian yeasts and lactic acid bacteria in fermented foods and beverages, aquaculture probiotics and yeasts for food biopreservation.