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Author : Hai Du
Publisher : Frontiers Media SA
ISBN 13 : 2832504140
Total Pages : 197 pages
Book Rating : 4.8/5 (325 download)
Download or read book Evolution of Crop Genomes and Epigenomes written by Hai Du and published by Frontiers Media SA. This book was released on 2022-11-07 with total page 197 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Author : Jonathan Wendel
Publisher : Springer Science & Business Media
ISBN 13 : 3709111307
Total Pages : 282 pages
Book Rating : 4.7/5 (91 download)
Download or read book Plant Genome Diversity Volume 1 written by Jonathan Wendel and published by Springer Science & Business Media. This book was released on 2012-03-23 with total page 282 pages. Available in PDF, EPUB and Kindle. Book excerpt: In this timely new 2-volume treatise, experts from around the world have banded together to produce a first-of-its-kind synopsis of the exciting and fast moving field of plant evolutionary genomics. In Volume I of Plant Genome Diversity, an update is provided on what we have learned from plant genome sequencing projects. This is followed by more focused chapters on the various genomic “residents” of plant genomes, including transposable elements, centromeres, small RNAs, and the evolutionary dynamics of genes and non-coding sequences. Attention is drawn to advances in our understanding of plant mitochondrial and plastid genomes, as well as the significance of duplication in genic evolution and the non-independent evolution among sequences in plant genomes. Finally, Volume I provides an introduction to the vibrant new frontier of plant epigenomics, describing the current state of our knowledge and the evolutionary implications of the epigenomic landscape.
Author :
Publisher :
ISBN 13 : 9783709111314
Total Pages : 279 pages
Book Rating : 4.1/5 (113 download)
Download or read book Plant Genome Diversity written by and published by . This book was released on 2012 with total page 279 pages. Available in PDF, EPUB and Kindle. Book excerpt: In this timely new 2-volume treatise, experts from around the world have banded together to produce a first-of-its-kind synopsis of the exciting and fast moving field of plant evolutionary genomics. In Volume I of Plant Genome Diversity, an update is provided on what we have learned from plant genome sequencing projects. This is followed by more focused chapters on the various genomic residents of plant genomes, including transposable elements, centromeres, small RNAs, and the evolutionary dynamics of genes and non-coding sequences. Attention is drawn to advances in our understanding of plant mitochondrial and plastid genomes, as well as the significance of duplication in genic evolution and the non-independent evolution among sequences in plant genomes. Finally, Volume I provides an introduction to the vibrant new frontier of plant epigenomics, describing the current state of our knowledge and the evolutionary implications of the epigenomic landscape.
Author : National Academies of Sciences, Engineering, and Medicine
Publisher : National Academies Press
ISBN 13 : 0309437385
Total Pages : 607 pages
Book Rating : 4.3/5 (94 download)
Download or read book Genetically Engineered Crops written by National Academies of Sciences, Engineering, and Medicine and published by National Academies Press. This book was released on 2017-01-28 with total page 607 pages. Available in PDF, EPUB and Kindle. Book excerpt: Genetically engineered (GE) crops were first introduced commercially in the 1990s. After two decades of production, some groups and individuals remain critical of the technology based on their concerns about possible adverse effects on human health, the environment, and ethical considerations. At the same time, others are concerned that the technology is not reaching its potential to improve human health and the environment because of stringent regulations and reduced public funding to develop products offering more benefits to society. While the debate about these and other questions related to the genetic engineering techniques of the first 20 years goes on, emerging genetic-engineering technologies are adding new complexities to the conversation. Genetically Engineered Crops builds on previous related Academies reports published between 1987 and 2010 by undertaking a retrospective examination of the purported positive and adverse effects of GE crops and to anticipate what emerging genetic-engineering technologies hold for the future. This report indicates where there are uncertainties about the economic, agronomic, health, safety, or other impacts of GE crops and food, and makes recommendations to fill gaps in safety assessments, increase regulatory clarity, and improve innovations in and access to GE technology.
Author : Pamela Soltis
Publisher : Springer Science & Business Media
ISBN 13 : 3642314414
Total Pages : 416 pages
Book Rating : 4.6/5 (423 download)
Download or read book Polyploidy and Genome Evolution written by Pamela Soltis and published by Springer Science & Business Media. This book was released on 2012-10-03 with total page 416 pages. Available in PDF, EPUB and Kindle. Book excerpt: Polyploidy – whole-genome duplication (WGD) – is a fundamental driver of biodiversity with significant consequences for genome structure, organization, and evolution. Once considered a speciation process common only in plants, polyploidy is now recognized to have played a major role in the structure, gene content, and evolution of most eukaryotic genomes. In fact, the diversity of eukaryotes seems closely tied to multiple WGDs. Polyploidy generates new genomic interactions – initially resulting in “genomic and transcriptomic shock” – that must be resolved in a new polyploid lineage. This process essentially acts as a “reset” button, resulting in genomic changes that may ultimately promote adaptive speciation. This book brings together for the first time the conceptual and theoretical underpinnings of polyploid genome evolution with syntheses of the patterns and processes of genome evolution in diverse polyploid groups. Because polyploidy is most common and best studied in plants, the book emphasizes plant models, but recent studies of vertebrates and fungi are providing fresh perspectives on factors that allow polyploid speciation and shape polyploid genomes. The emerging paradigm is that polyploidy – through alterations in genome structure and gene regulation – generates genetic and phenotypic novelty that manifests itself at the chromosomal, physiological, and organismal levels, with long-term ecological and evolutionary consequences.
Author : Takuji Sasaki
Publisher : Springer
ISBN 13 : 9811074615
Total Pages : 558 pages
Book Rating : 4.8/5 (11 download)
Download or read book Rice Genomics, Genetics and Breeding written by Takuji Sasaki and published by Springer. This book was released on 2018-02-14 with total page 558 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents the latest advances in rice genomics, genetics and breeding, with a special focus on their importance for rice biology and how they are breathing new life into traditional genetics. Rice is the main staple food for more than half of the world’s population. Accordingly, sustainable rice production is a crucial issue, particularly in Asia and Africa, where the population continues to grow at an alarming rate. The book’s respective chapters offer new and timely perspectives on the synergistic effects of genomics and genetics in novel rice breeding approaches, which can help address the urgent issue of providing enough food for a global population that is expected to reach 9 billion by 2050.
Author : Charles Spillane
Publisher : Humana
ISBN 13 : 9781627037723
Total Pages : 0 pages
Book Rating : 4.0/5 (377 download)
Download or read book Plant Epigenetics and Epigenomics written by Charles Spillane and published by Humana. This book was released on 2014-01-31 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Many fundamental discoveries concerning epigenetics and the elucidation of mechanisms of epigenetic regulation have developed from studies performed in plants. In Plant Epigenetics and Epigenomics: Methods and Protocols, leading scientists in the epigenetics field describe comprehensive techniques that have been developed to understand the plant epigenetic landscape. These include recently developed methods and techniques for analysis of epigenetically regulated traits, such as flowering time, transposon activation, genomic imprinting and genome dosage effects. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and key tips on troubleshooting and avoidance of known pitfalls. Authoritative and practical, Plant Epigenetics and Epigenomics: Methods and Protocols seek to aid scientists in the further study of plant epigenetic phenomena using advanced contemporary methods.
Author : Christian R. Landry
Publisher : Springer Science & Business Media
ISBN 13 : 9400773471
Total Pages : 358 pages
Book Rating : 4.4/5 (7 download)
Download or read book Ecological Genomics written by Christian R. Landry and published by Springer Science & Business Media. This book was released on 2013-11-25 with total page 358 pages. Available in PDF, EPUB and Kindle. Book excerpt: Researchers in the field of ecological genomics aim to determine how a genome or a population of genomes interacts with its environment across ecological and evolutionary timescales. Ecological genomics is trans-disciplinary by nature. Ecologists have turned to genomics to be able to elucidate the mechanistic bases of the biodiversity their research tries to understand. Genomicists have turned to ecology in order to better explain the functional cellular and molecular variation they observed in their model organisms. We provide an advanced-level book that covers this recent research and proposes future development for this field. A synthesis of the field of ecological genomics emerges from this volume. Ecological Genomics covers a wide array of organisms (microbes, plants and animals) in order to be able to identify central concepts that motivate and derive from recent investigations in different branches of the tree of life. Ecological Genomics covers 3 fields of research that have most benefited from the recent technological and conceptual developments in the field of ecological genomics: the study of life-history evolution and its impact of genome architectures; the study of the genomic bases of phenotypic plasticity and the study of the genomic bases of adaptation and speciation.
Author : John E. Bradshaw
Publisher : Springer
ISBN 13 : 3319232851
Total Pages : 693 pages
Book Rating : 4.3/5 (192 download)
Download or read book Plant Breeding: Past, Present and Future written by John E. Bradshaw and published by Springer. This book was released on 2016-03-08 with total page 693 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book aims to help plant breeders by reviewing past achievements, currently successful practices, and emerging methods and techniques. Theoretical considerations are also presented to strike the right balance between being as simple as possible but as complex as necessary. The United Nations predicts that the global human population will continue rising to 9.0 billion by 2050. World food production will need to increase between 70-100 per cent in just 40 years. First generation bio-fuels are also using crops and cropland to produce energy rather than food. In addition, land area used for agriculture may remain static or even decrease as a result of degradation and climate change, despite more land being theoretically available, unless crops can be bred which tolerate associated abiotic stresses. Lastly, it is unlikely that steps can be taken to mitigate all of the climate change predicted to occur by 2050, and beyond, and hence adaptation of farming systems and crop production will be required to reduce predicted negative effects on yields that will occur without crop adaptation. Substantial progress will therefore be required in bridging the yield gap between what is currently achieved per unit of land and what should be possible in future, with the best farming methods and best storage and transportation of food, given the availability of suitably adapted cultivars, including adaptation to climate change. My book is divided into four parts: Part I is an historical introduction; Part II deals with the origin of genetic variation by mutation and recombination of DNA; Part III explains how the mating system of a crop species determines the genetic structure of its landraces; Part IV considers the three complementary options for future progress: use of sexual reproduction in further conventional breeding, base broadening and introgression; mutation breeding; and genetically modified crops.
Author : Nils Stein
Publisher : Springer
ISBN 13 : 3319925288
Total Pages : 394 pages
Book Rating : 4.3/5 (199 download)
Download or read book The Barley Genome written by Nils Stein and published by Springer. This book was released on 2018-08-18 with total page 394 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents an overview of the state-of-the-art in barley genome analysis, covering all aspects of sequencing the genome and translating this important information into new knowledge in basic and applied crop plant biology and new tools for research and crop improvement. Unlimited access to a high-quality reference sequence is removing one of the major constraints in basic and applied research. This book summarizes the advanced knowledge of the composition of the barley genome, its genes and the much larger non-coding part of the genome, and how this information facilitates studying the specific characteristics of barley. One of the oldest domesticated crops, barley is the small grain cereal species that is best adapted to the highest altitudes and latitudes, and it exhibits the greatest tolerance to most abiotic stresses. With comprehensive access to the genome sequence, barley’s importance as a genetic model in comparative studies on crop species like wheat, rye, oats and even rice is likely to increase.
Author : Manoj Kumar Gupta
Publisher : Springer Nature
ISBN 13 : 9811639973
Total Pages : 363 pages
Book Rating : 4.8/5 (116 download)
Download or read book Applications of Bioinformatics in Rice Research written by Manoj Kumar Gupta and published by Springer Nature. This book was released on 2021-09-24 with total page 363 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book summarizes the advanced computational methods for mapping high-density linkages and quantitative trait loci in the rice genome. It also discusses the tools for analyzing metabolomics, identifying complex polyploidy genomes, and decoding the extrachromosomal genome in rice. Further, the book highlights the application of CRISPR-Cas technology and methods for understanding the evolutionary development and the de novo evolution of genes in rice. Lastly, it discusses the role of artificial intelligence and machine learning in rice research and computational tools to analyze plant-pathogen co-evolution in rice crops.
Author : Sandeep Kumar
Publisher : Frontiers Media SA
ISBN 13 : 2889668150
Total Pages : 148 pages
Book Rating : 4.8/5 (896 download)
Download or read book CRISPR-Cas in Agriculture: Opportunities and Challenges written by Sandeep Kumar and published by Frontiers Media SA. This book was released on 2021-05-28 with total page 148 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Author : Christian Dürnberger
Publisher : Nomos Verlag
ISBN 13 : 3845296437
Total Pages : 294 pages
Book Rating : 4.8/5 (452 download)
Download or read book Genome Editing in Agriculture written by Christian Dürnberger and published by Nomos Verlag. This book was released on 2019-02-05 with total page 294 pages. Available in PDF, EPUB and Kindle. Book excerpt: Neue Pflanzenzüchtungstechnologien wie CRISPR/Cas haben das Potenzial zur Verbesserung der Nachhaltigkeit in der Landwirtschaft. Mit den Techniken des Genome Editing können die Erträge bei gleichzeitig reduziertem Pestizideinsatz gesteigert werden. Auch an der Verbesserung des Nährwerts von Pflanzen wird weltweit geforscht. Ob die neuen Techniken allerdings in Europa zum Einsatz kommen, ist gegenwärtig fraglich. Soll Genome Editing wie die "klassische" Gentechnik reguliert werden? Und wie kann eine verantwortliche Auslegung des Vorsorgeprinzips beim Einsatz der neuen Technologien aussehen? Die politische Diskussion um die Bewertung der neuen Pflanzenzüchtungstechnologien ist in vollem Gange. Die Beiträge dieses Sammelbands präsentieren rechtliche, soziale und ethische Aspekten zum Thema, die auf einer Summer School des Instituts Technik-Theologie-Naturwissenschaften (TTN) an der Ludwig-Maximilians-Universität München zur Diskussion standen. Mit Beiträgen von Stephan Schleissing; Sebastian Pfeilmeier; Christian Dürnberger; Jarst van Belle; Jan Schaart; Robert van Loo; Katharina Unkel; Thorben Sprink; Aurélie Jouanin; Marinus J.M. Smulders; Hans-Georg Dederer; Brigitte Voigt; Felix Beck; João Otávio Benevides Demasi; Bartosz Bartkowski; Chad M. Baum; Alexander Bogner; Helge Torgersen; Sebastian Schubert; Anne Friederike Hoffmann; Ksenia Gerasimova; Karolina Rucinska
Author : Jerzy Kulski
Publisher : BoD – Books on Demand
ISBN 13 : 9535122401
Total Pages : 466 pages
Book Rating : 4.5/5 (351 download)
Download or read book Next Generation Sequencing written by Jerzy Kulski and published by BoD – Books on Demand. This book was released on 2016-01-14 with total page 466 pages. Available in PDF, EPUB and Kindle. Book excerpt: Next generation sequencing (NGS) has surpassed the traditional Sanger sequencing method to become the main choice for large-scale, genome-wide sequencing studies with ultra-high-throughput production and a huge reduction in costs. The NGS technologies have had enormous impact on the studies of structural and functional genomics in all the life sciences. In this book, Next Generation Sequencing Advances, Applications and Challenges, the sixteen chapters written by experts cover various aspects of NGS including genomics, transcriptomics and methylomics, the sequencing platforms, and the bioinformatics challenges in processing and analysing huge amounts of sequencing data. Following an overview of the evolution of NGS in the brave new world of omics, the book examines the advances and challenges of NGS applications in basic and applied research on microorganisms, agricultural plants and humans. This book is of value to all who are interested in DNA sequencing and bioinformatics across all fields of the life sciences.
Author : Raúl Alvarez-Venegas
Publisher : Springer
ISBN 13 : 3319079719
Total Pages : 152 pages
Book Rating : 4.3/5 (19 download)
Download or read book Epigenetics in Plants of Agronomic Importance: Fundamentals and Applications written by Raúl Alvarez-Venegas and published by Springer. This book was released on 2014-07-22 with total page 152 pages. Available in PDF, EPUB and Kindle. Book excerpt: Over the past decades, chromatin remodelling has emerged as an important regulator of gene expression and plant defense. This book provides a detailed understanding of the epigenetic mechanisms involved in plants of agronomic importance. The information presented here is significant because it is expected to provide the knowledge needed to develop in the future treatments to manipulate and selectively activate/inhibit proteins and metabolic pathways to counter pathogens, to treat important diseases and to increase crop productivity. New approaches of this kind and the development of new technologies will certainly increase our knowledge of currently known post-translational modifications and facilitate the understanding of their roles in, for example, host-pathogen interactions and crop productivity. Furthermore, we provide important insight on how the plant epigenome changes in response to developmental or environmental stimuli, how chromatin modifications are established and maintained, to which degree they are used throughout the genome, and how chromatin modifications influence each another.
Author : Trygve Tollefsbol
Publisher : Elsevier
ISBN 13 : 0124059228
Total Pages : 413 pages
Book Rating : 4.1/5 (24 download)
Download or read book Transgenerational Epigenetics written by Trygve Tollefsbol and published by Elsevier. This book was released on 2014-05-02 with total page 413 pages. Available in PDF, EPUB and Kindle. Book excerpt: Transgenerational Epigenetics provides a comprehensive analysis of the inheritance of epigenetic phenomena between generations. Recent research points to the existence of biological phenomena that are controlled not through gene mutations, but rather through reversible and heritable epigenetic processes. Epidemiological studies have suggested that environmental factors may be heritable. In fact, environmental factors often play a role in transgenerational epigenetics, which may have selective or adverse effects on the offspring. This epigenetic information can be transferred through a number of mechanisms including DNA methylation, histone modifications or RNA and the effects can persist for multiple generations. This book examines the evolution of epigenetic inheritance, its expression in animal and plant models, and how human diseases, such as metabolic disorders and cardiovascular diseases, appear to be affected by transgenerational epigenetic inheritance. It discusses clinical interventions in transgenerational epigenetic inheritance that may be on the horizon to help prevent diseases before the offspring are born, or to reduce the severity of diseases at the very earliest stages of development in utero, and current controversies in this area of study, as well as future directions for research. Focused discussion of metabolic disorders, cardiovascular diseases and longevity, which appear most affected by reversible and heritable epigenetic processes Encompasses both foundational and clinical aspects including discussions of preventative in utero therapies Covers history, future outlook, disease management and current controversies
Author : B. F. Vani︠u︡shin
Publisher : Nova Science Publishers
ISBN 13 : 9781606920510
Total Pages : 0 pages
Book Rating : 4.9/5 (25 download)
Download or read book DNA Methylation in Plants written by B. F. Vani︠u︡shin and published by Nova Science Publishers. This book was released on 2008 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: A high degree of nuclear DNA (nDNA) methylation is a specific feature of plant genomes, they do contain 5-methylcytosine (m5C) and N6-methyladenine (m6A). More than 30% m5C is located in CNG sequences. Specific changes in DNA methylation accompany the entire life of a plant starting from seed germination up to the death programmed or induced by various agents and factors of biological or abiotic nature. Modulation of DNA methylation is one of the possible modes of the hormonal action in plant. DNA methylation in plants is species-, tissue-, organelle- and age-specific; it is involved in the control of all genetic functions including transcription, replication, DNA repair, gene transposition and cell differentiation. DNA methylation is engaged in gene silencing and parental imprinting, it controls transgenes and foreign DNA. Plants have much more complicated and sophisticated system of the multi-component and sometimes even conjugated genome (nuclear DNA) methylations compared with animals; besides, unlike animals, they have the plastids with their own unique DNA modification system that may control plastid differentiation and functioning; DNA methylation in plant mitochondria is performed in other fashion compared with it in nuclei. The nuclear DNA methylation system is controlled by three major families of cytosine DNA-methyltransferase genes, at least. In contrast to animals the inactivation of major maintenance methyltransferase MET1 (similar to animal Dnmt1) has no significant consequences for plant survival. Other plant cytosine DNA-methyltransferases have no analogs in animals. Some of them (DRM) are responsible for de novo DNA methylation including asymmetric sequences. Plant gene may be methylated at both adenine and cytosine residues; specific adenine DNA-methyltransferase was described. Adenine DNA methylation may influence cytosine modification and vice versa. Anyway, two different systems of the genome modification based on methylation of adenines and cytosines coexist in higher plants. The specific endonucleases discriminating between methylated and unmethylated DNA are present in plants. Thus, plants may have restriction-modification system. There are peculiar complicated controls for growth and development by DNA methylations in plants; they are well co-ordinated with other epigenetic signals modulating chromatin organisation.
