Environmental Drivers And Evolutionary Consequences Of Horizontal Gene Transfer In Soil Bacteria

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The Pangenome

Author : Hervé Tettelin
Publisher : Springer Nature
ISBN 13 : 3030382818
Total Pages : 311 pages
Book Rating : 4.0/5 (33 download)

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Book Synopsis The Pangenome by : Hervé Tettelin

Download or read book The Pangenome written by Hervé Tettelin and published by Springer Nature. This book was released on 2020-04-30 with total page 311 pages. Available in PDF, EPUB and Kindle. Book excerpt: This open access book offers the first comprehensive account of the pan-genome concept and its manifold implications. The realization that the genetic repertoire of a biological species always encompasses more than the genome of each individual is one of the earliest examples of big data in biology that opened biology to the unbounded. The study of genetic variation observed within a species challenges existing views and has profound consequences for our understanding of the fundamental mechanisms underpinning bacterial biology and evolution. The underlying rationale extends well beyond the initial prokaryotic focus to all kingdoms of life and evolves into similar concepts for metagenomes, phenomes and epigenomes. The book’s respective chapters address a range of topics, from the serendipitous emergence of the pan-genome concept and its impacts on the fields of microbiology, vaccinology and antimicrobial resistance, to the study of microbial communities, bioinformatic applications and mathematical models that tie in with complex systems and economic theory. Given its scope, the book will appeal to a broad readership interested in population dynamics, evolutionary biology and genomics.

Mobile DNA III

Author : Michael Chandler
Publisher : John Wiley & Sons
ISBN 13 : 1555819214
Total Pages : 1347 pages
Book Rating : 4.5/5 (558 download)

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Book Synopsis Mobile DNA III by : Michael Chandler

Download or read book Mobile DNA III written by Michael Chandler and published by John Wiley & Sons. This book was released on 2020-07-24 with total page 1347 pages. Available in PDF, EPUB and Kindle. Book excerpt: An exploration of the raw power of genetic material to refashion itself to any purpose... Virtually all organisms contain multiple mobile DNAs that can move from place to place, and in some organisms, mobile DNA elements make up a significant portion of the genome. Mobile DNA III provides a comprehensive review of recent research, including findings suggesting the important role that mobile elements play in genome evolution and stability. Editor-in-Chief Nancy L. Craig assembled a team of multidisciplinary experts to develop this cutting-edge resource that covers the specific molecular mechanisms involved in recombination, including a detailed structural analysis of the enzymes responsible presents a detailed account of the many different recombination systems that can rearrange genomes examines the tremendous impact of mobile DNA in virtually all organisms Mobile DNA III is valuable as an in-depth supplemental reading for upper level life sciences students and as a reference for investigators exploring new biological systems. Biomedical researchers will find documentation of recent advances in understanding immune-antigen conflict between host and pathogen. It introduces biotechnicians to amazing tools for in vivo control of designer DNAs. It allows specialists to pick and choose advanced reviews of specific elements and to be drawn in by unexpected parallels and contrasts among the elements in diverse organisms. Mobile DNA III provides the most lucid reviews of these complex topics available anywhere.

DNA-containing Membrane Vesicles of Pseudomonas Aeruginosa PAO1 and Their Genetic Transformation Potential [microform]

Author : Marika Renelli
Publisher : National Library of Canada = Bibliothèque nationale du Canada
ISBN 13 : 9780612906921
Total Pages : 106 pages
Book Rating : 4.9/5 (69 download)

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Book Synopsis DNA-containing Membrane Vesicles of Pseudomonas Aeruginosa PAO1 and Their Genetic Transformation Potential [microform] by : Marika Renelli

Download or read book DNA-containing Membrane Vesicles of Pseudomonas Aeruginosa PAO1 and Their Genetic Transformation Potential [microform] written by Marika Renelli and published by National Library of Canada = Bibliothèque nationale du Canada. This book was released on 2004 with total page 106 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Bacteriophages in Health and Disease

Author : Paul Hyman
Publisher : CABI
ISBN 13 : 1845939840
Total Pages : 296 pages
Book Rating : 4.8/5 (459 download)

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Book Synopsis Bacteriophages in Health and Disease by : Paul Hyman

Download or read book Bacteriophages in Health and Disease written by Paul Hyman and published by CABI. This book was released on 2012 with total page 296 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bacteriophages are viruses that infect bacteria; as such, they have many potential uses for promoting health and combating disease. This book covers the many facets of phage-bacterial-human interaction in three sections: the role and impact of phages on natural bacterial communities, the potential to develop phage-based therapeutics and other aspects in which phages can be used to combat disease, including bacterial detection, bacterial epidemiology, the tracing of fecal contamination of water and decontamination of foods.

Intracellular Parasitism

Author : James W. Moulder
Publisher : CRC Press
ISBN 13 : 1000098532
Total Pages : 287 pages
Book Rating : 4.0/5 ( download)

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Book Synopsis Intracellular Parasitism by : James W. Moulder

Download or read book Intracellular Parasitism written by James W. Moulder and published by CRC Press. This book was released on 2020-10-28 with total page 287 pages. Available in PDF, EPUB and Kindle. Book excerpt: This publication is a collection of essays on the biology of intracellular parasitisms where both bacterial and protozoan parasites are discussed. The juxtaposition of authors representing fields of research emphasizes the many common problems facing intracellular parasites and the hosts that harbor them. In addition, numerous illustrations of how different parasites and host attempt to solve these problems in different ways are provided. The book includes one or more chapters on Bdellovibrio, Chlamydia, Rickettsia, Coxiella, Legionella, Shigellae, Mycobacterium, Microsporidium, Plasmodium, and Toxoplasma. The authors frequently speculate and generalize on the subject matter discussed.

Gene Drives on the Horizon

Author : National Academies of Sciences, Engineering, and Medicine
Publisher : National Academies Press
ISBN 13 : 0309437873
Total Pages : 231 pages
Book Rating : 4.3/5 (94 download)

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Book Synopsis Gene Drives on the Horizon by : National Academies of Sciences, Engineering, and Medicine

Download or read book Gene Drives on the Horizon written by National Academies of Sciences, Engineering, and Medicine and published by National Academies Press. This book was released on 2016-08-28 with total page 231 pages. Available in PDF, EPUB and Kindle. Book excerpt: Research on gene drive systems is rapidly advancing. Many proposed applications of gene drive research aim to solve environmental and public health challenges, including the reduction of poverty and the burden of vector-borne diseases, such as malaria and dengue, which disproportionately impact low and middle income countries. However, due to their intrinsic qualities of rapid spread and irreversibility, gene drive systems raise many questions with respect to their safety relative to public and environmental health. Because gene drive systems are designed to alter the environments we share in ways that will be hard to anticipate and impossible to completely roll back, questions about the ethics surrounding use of this research are complex and will require very careful exploration. Gene Drives on the Horizon outlines the state of knowledge relative to the science, ethics, public engagement, and risk assessment as they pertain to research directions of gene drive systems and governance of the research process. This report offers principles for responsible practices of gene drive research and related applications for use by investigators, their institutions, the research funders, and regulators.

The Logic of Chance

Author : Eugene V. Koonin
Publisher : FT Press
ISBN 13 : 013262317X
Total Pages : 530 pages
Book Rating : 4.1/5 (326 download)

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Book Synopsis The Logic of Chance by : Eugene V. Koonin

Download or read book The Logic of Chance written by Eugene V. Koonin and published by FT Press. This book was released on 2011-06-23 with total page 530 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Logic of Chance offers a reappraisal and a new synthesis of theories, concepts, and hypotheses on the key aspects of the evolution of life on earth in light of comparative genomics and systems biology. The author presents many specific examples from systems and comparative genomic analysis to begin to build a new, much more detailed, complex, and realistic picture of evolution. The book examines a broad range of topics in evolutionary biology including the inadequacy of natural selection and adaptation as the only or even the main mode of evolution; the key role of horizontal gene transfer in evolution and the consequent overhaul of the Tree of Life concept; the central, underappreciated evolutionary importance of viruses; the origin of eukaryotes as a result of endosymbiosis; the concomitant origin of cells and viruses on the primordial earth; universal dependences between genomic and molecular-phenomic variables; and the evolving landscape of constraints that shape the evolution of genomes and molecular phenomes. "Koonin's account of viral and pre-eukaryotic evolution is undoubtedly up-to-date. His "mega views" of evolution (given what was said above) and his cosmological musings, on the other hand, are interesting reading." Summing Up: Recommended Reprinted with permission from CHOICE, copyright by the American Library Association.

The Social Biology of Microbial Communities

Author : Institute of Medicine
Publisher : National Academies Press
ISBN 13 : 0309264324
Total Pages : 633 pages
Book Rating : 4.3/5 (92 download)

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Book Synopsis The Social Biology of Microbial Communities by : Institute of Medicine

Download or read book The Social Biology of Microbial Communities written by Institute of Medicine and published by National Academies Press. This book was released on 2013-01-10 with total page 633 pages. Available in PDF, EPUB and Kindle. Book excerpt: Beginning with the germ theory of disease in the 19th century and extending through most of the 20th century, microbes were believed to live their lives as solitary, unicellular, disease-causing organisms . This perception stemmed from the focus of most investigators on organisms that could be grown in the laboratory as cellular monocultures, often dispersed in liquid, and under ambient conditions of temperature, lighting, and humidity. Most such inquiries were designed to identify microbial pathogens by satisfying Koch's postulates.3 This pathogen-centric approach to the study of microorganisms produced a metaphorical "war" against these microbial invaders waged with antibiotic therapies, while simultaneously obscuring the dynamic relationships that exist among and between host organisms and their associated microorganisms-only a tiny fraction of which act as pathogens. Despite their obvious importance, very little is actually known about the processes and factors that influence the assembly, function, and stability of microbial communities. Gaining this knowledge will require a seismic shift away from the study of individual microbes in isolation to inquiries into the nature of diverse and often complex microbial communities, the forces that shape them, and their relationships with other communities and organisms, including their multicellular hosts. On March 6 and 7, 2012, the Institute of Medicine's (IOM's) Forum on Microbial Threats hosted a public workshop to explore the emerging science of the "social biology" of microbial communities. Workshop presentations and discussions embraced a wide spectrum of topics, experimental systems, and theoretical perspectives representative of the current, multifaceted exploration of the microbial frontier. Participants discussed ecological, evolutionary, and genetic factors contributing to the assembly, function, and stability of microbial communities; how microbial communities adapt and respond to environmental stimuli; theoretical and experimental approaches to advance this nascent field; and potential applications of knowledge gained from the study of microbial communities for the improvement of human, animal, plant, and ecosystem health and toward a deeper understanding of microbial diversity and evolution. The Social Biology of Microbial Communities: Workshop Summary further explains the happenings of the workshop.

In the Light of Evolution V: Cooperation and Conflict

Author :
Publisher : National Academies Press
ISBN 13 : 030921839X
Total Pages : 538 pages
Book Rating : 4.3/5 (92 download)

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Book Synopsis In the Light of Evolution V: Cooperation and Conflict by :

Download or read book In the Light of Evolution V: Cooperation and Conflict written by and published by National Academies Press. This book was released on with total page 538 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Bacteriophages

Author : David R. Harper
Publisher : Springer Nature
ISBN 13 : 3319419862
Total Pages : 1376 pages
Book Rating : 4.3/5 (194 download)

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Book Synopsis Bacteriophages by : David R. Harper

Download or read book Bacteriophages written by David R. Harper and published by Springer Nature. This book was released on 2021-01-30 with total page 1376 pages. Available in PDF, EPUB and Kindle. Book excerpt: This first major reference work dedicated to the mannifold industrial and medical applications of bacteriophages provides both theoretical and practical insights into the emerging field of bacteriophage biotechnology. The book introduces to bacteriophage biology, ecology and history and reviews the latest technologies and tools in bacteriophage detection, strain optimization and nanotechnology. Usage of bacteriophages in food safety, agriculture, and different therapeutic areas is discussed in detail. This book serves as essential guide for researchers in applied microbiology, biotechnology and medicine coming from both academia and industry.

Agriculturally Important Microbes for Sustainable Agriculture

Author : Vijay Singh Meena
Publisher : Springer
ISBN 13 : 9789811053429
Total Pages : 374 pages
Book Rating : 4.0/5 (534 download)

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Book Synopsis Agriculturally Important Microbes for Sustainable Agriculture by : Vijay Singh Meena

Download or read book Agriculturally Important Microbes for Sustainable Agriculture written by Vijay Singh Meena and published by Springer. This book was released on 2017-10-03 with total page 374 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is a compilation of case studies from different countries and covers contemporary with future prospective for sustainable development of agriculture. The book highlights the real-world as well as future generation situations facing the challenges for the twenty first century will be production of sufficient food and highlights the strengths, weaknesses and opportunities, to meet the needs of fast growing population it is imperative to increase agricultural productivity in an environmentally sustainable manner. Due to imbalanced use of chemical fertilizers and agrochemicals has a considerable negative impact on economy and environmental sustainability of nation, for the sustainable alternative means to solve these problems, the efficient utilization of biological agents have been extensively studied. Naturally existing plant-microbe-environment interactions are utilized in many ways for enhancing plant productivity. A greater understanding of how plants and microbes live together and benefit each other can therefore provide new strategies to improve plant productivity, in most sustainable way. To achieve the objective of sustainable agricultural practices there is a need for understanding both basic and applied aspects of agriculturally important microorganisms. Focus needs to be on transforming agricultural systems from nutrient deficient to nutrient rich soil-plant system. This book is split into two parts, with an aim to provide comprehensive description and highlight a holistic approach. It elucidated various mechanisms of nutrients solubilisation and its importance in enhancement of plant growth, nutrient content, yield of various crops and vegetables as well as soil fertility and health. Unit-1 in this book explains the importance of soil microbes in sustainable crop production. It contains chapters detailing the role and mechanism of action of soil microbes which enhances the productivity via various bio-chemical and molecular channe ls. In unit-2 the role of microbes in plant protection is elaborated. With the help of case studies of food crops, multiple ways in which soil microbes help in fighting and preventing plant diseases is explained. With the given content and layout book will be an all-inclusive collection of information, which will be useful for students, academicians, researchers working in the field of rhizospheric mechanisms, agricultural microbiology, soil microbiology, biotechnology, agronomy and sustainable agriculture and also for policy makers in the area of food security and sustainable agriculture.

The Biology of Plasmids

Author : David Summers
Publisher : John Wiley & Sons
ISBN 13 : 1444313738
Total Pages : 169 pages
Book Rating : 4.4/5 (443 download)

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Book Synopsis The Biology of Plasmids by : David Summers

Download or read book The Biology of Plasmids written by David Summers and published by John Wiley & Sons. This book was released on 2009-07-17 with total page 169 pages. Available in PDF, EPUB and Kindle. Book excerpt: Plasmids are closed, circular pieces of DNA that are able to self-replicate and are carried by many bacteria. They provide unique functions for bacteria by allowing them to sexually replicate and to pass on genetic material between each other. Plasmids are also responsible for the genetic factors that give resistance to antibiotics, and provide the enzymes needed to break down poorly metabolised food resources. The author has provided an updated treatment of the structure, function and application of plasmids suitable for undergraduates and medical students. Employing an original teaching perspective--examining plasmids as living organisms with either a symbiotic or parasitic mode of survival--this text provides an important framework for understanding the structure and function of plasmids in an evolutionary context. The most up to date text on plasmids An innovative teaching perspective makes for easy student understanding Contains crucial chapters on the importance of plasmids for clinical and biological research

Symbiosis as a Source of Evolutionary Innovation

Author : Lynn Margulis
Publisher : MIT Press
ISBN 13 : 9780262132695
Total Pages : 482 pages
Book Rating : 4.1/5 (326 download)

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Book Synopsis Symbiosis as a Source of Evolutionary Innovation by : Lynn Margulis

Download or read book Symbiosis as a Source of Evolutionary Innovation written by Lynn Margulis and published by MIT Press. This book was released on 1991 with total page 482 pages. Available in PDF, EPUB and Kindle. Book excerpt: These original contributions by symbiosis biologists and evolutionary theorists address the adequacy of the prevailing neo-Darwinian concept of evolution in the light of growing evidence that hereditary symbiosis, supplemented by the gradual accumulation of heritable mutation, results in the origin of new species and morphological novelty.A departure from mainstream biology, the idea of symbiosis--as in the genetic and metabolic interactions of the bacterial communities that became the earliest eukaryotes and eventually evolved into plants and animals--has attracted the attention of a growing number of scientists.These original contributions by symbiosis biologists and evolutionary theorists address the adequacy of the prevailing neo-Darwinian concept of evolution in the light of growing evidence that hereditary symbiosis, supplemented by the gradual accumulation of heritable mutation, results in the origin of new species and morphological novelty. They include reports of current research on the evolutionary consequences of symbiosis, the protracted physical association between organisms of different species. Among the issues considered are individuality and evolution, microbial symbioses, animal-bacterial symbioses, and the importance of symbiosis in cell evolution, ecology, and morphogenesis. Lynn Margulis, Distinguished Professor of Botany at the University of Massachusetts at Amherst, is the modern originator of the symbiotic theory of cell evolution. Once considered heresy, her ideas are now part of the microbiological revolution. ContributorsPeter Atsatt, Richard C. Back, David Bermudes, Paola Bonfante-Fasolo, René Fester, Lynda J. Goff, Anne-Marie Grenier, Ricardo Guerrero, Robert H. Haynes, Rosmarie Honegger, Gregory Hinkle, Kwang W. Jeon, Bryce Kendrick, Richard Law, David Lewis, Lynn Margulis, John Maynard Smith, Margaret J. McFall-Ngai, Paul Nardon, Kenneth H. Nealson, Kris Pirozynski, Peter W. Price, Mary Beth Saffo, Jan Sapp, Silvano Scannerini, Werner Schwemmler, Sorin Sonea, Toomas H. Tiivel, Robert K. Trench, Russell Vetter

The New Science of Metagenomics

Author : National Research Council
Publisher : National Academies Press
ISBN 13 : 0309106761
Total Pages : 170 pages
Book Rating : 4.3/5 (91 download)

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Book Synopsis The New Science of Metagenomics by : National Research Council

Download or read book The New Science of Metagenomics written by National Research Council and published by National Academies Press. This book was released on 2007-06-24 with total page 170 pages. Available in PDF, EPUB and Kindle. Book excerpt: Although we can't usually see them, microbes are essential for every part of human life-indeed all life on Earth. The emerging field of metagenomics offers a new way of exploring the microbial world that will transform modern microbiology and lead to practical applications in medicine, agriculture, alternative energy, environmental remediation, and many others areas. Metagenomics allows researchers to look at the genomes of all of the microbes in an environment at once, providing a "meta" view of the whole microbial community and the complex interactions within it. It's a quantum leap beyond traditional research techniques that rely on studying-one at a time-the few microbes that can be grown in the laboratory. At the request of the National Science Foundation, five Institutes of the National Institutes of Health, and the Department of Energy, the National Research Council organized a committee to address the current state of metagenomics and identify obstacles current researchers are facing in order to determine how to best support the field and encourage its success. The New Science of Metagenomics recommends the establishment of a "Global Metagenomics Initiative" comprising a small number of large-scale metagenomics projects as well as many medium- and small-scale projects to advance the technology and develop the standard practices needed to advance the field. The report also addresses database needs, methodological challenges, and the importance of interdisciplinary collaboration in supporting this new field.

Combating Antimicrobial Resistance

Author : National Academies of Sciences, Engineering, and Medicine
Publisher : National Academies Press
ISBN 13 : 0309466520
Total Pages : 173 pages
Book Rating : 4.3/5 (94 download)

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Book Synopsis Combating Antimicrobial Resistance by : National Academies of Sciences, Engineering, and Medicine

Download or read book Combating Antimicrobial Resistance written by National Academies of Sciences, Engineering, and Medicine and published by National Academies Press. This book was released on 2018-01-08 with total page 173 pages. Available in PDF, EPUB and Kindle. Book excerpt: As of 2017, the emergence and spread of antimicrobial resistance continues unabated around the world, leaving devastating health and economic outcomes in its wake. Those consequences will multiply if collaborative global action is not taken to address the spread of resistance. Major drivers of antimicrobial resistance in humans have been accelerated by inappropriate antimicrobial prescribing in health care practices; the inappropriate use of antimicrobials in livestock; and the promulgation of antibiotic resistance genes in the environment. To explore the issue of antimicrobial resistance, the Forum of Microbial Threats planned a public workshop. Participants explored issues of antimicrobial resistance through the lens of One Health, which is a collaborative approach of multiple disciplines - working locally, nationally, and globally - for strengthening systems to counter infectious diseases and related issues that threaten human, animal, and environmental health, with an end point of improving global health and achieving gains in development. They also discussed immediate and short-term actions and research needs that will have the greatest effect on reducing antimicrobial resistance, while taking into account the complexities of bridging different sectors and disciplines to address this global threat. This publication summarizes the presentations and discussions from the workshop.

The Spatial Distribution of Microbes in the Environment

Author : Rima Franklin
Publisher : Springer Science & Business Media
ISBN 13 : 1402062168
Total Pages : 339 pages
Book Rating : 4.4/5 (2 download)

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Book Synopsis The Spatial Distribution of Microbes in the Environment by : Rima Franklin

Download or read book The Spatial Distribution of Microbes in the Environment written by Rima Franklin and published by Springer Science & Business Media. This book was released on 2007-09-04 with total page 339 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume highlights recent advances that have contributed to our understanding of spatial patterns and scale issues in microbial ecology. The book brings together research conducted at a range of spatial scales (from μm to km) and in a variety of different types of environments. These topics are addressed in a quantitative manner, and a primer on statistical methods is included. In soil ecosystems, both bacteria and fungi are discussed.

Microbial Megaplasmids

Author : Edward Schwartz
Publisher : Springer Science & Business Media
ISBN 13 : 3540854673
Total Pages : 348 pages
Book Rating : 4.5/5 (48 download)

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Book Synopsis Microbial Megaplasmids by : Edward Schwartz

Download or read book Microbial Megaplasmids written by Edward Schwartz and published by Springer Science & Business Media. This book was released on 2009-01-29 with total page 348 pages. Available in PDF, EPUB and Kindle. Book excerpt: Megaplasmids are extrachromosomal genetic elements in the size range of 100 kb and larger. They are found in physiologically and phylogenetically diverse groups of bacteria and archaea. By definition, megaplasmids are not essential for the viability of their hosts under all growth conditions, but paradoxically many megaplasmids carry the genetic information for the defining and characteristic traits of the organism in which they reside. Microbial Megaplasmids reviews our knowledge of the extensively studied representatives, such as the catabolic plasmids of the pseudomonads, the rhizobial Sym plasmids, the Ti plasmids of the genus Agrobacterium and the giant enterobacterial virulence plasmids. It also presents snapshots of more recently discovered megaplasmids. The contribution of megaplasmids to the biology of their hosts is described, highlighting the interactions between megaplasmid and chromosomal genes.