Cancer Systems Biology, Bioinformatics and Medicine

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Publisher : Springer Science & Business Media
ISBN 13 : 9789400715677
Total Pages : 484 pages
Book Rating : 4.7/5 (156 download)

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Book Synopsis Cancer Systems Biology, Bioinformatics and Medicine by : Alfredo Cesario

Download or read book Cancer Systems Biology, Bioinformatics and Medicine written by Alfredo Cesario and published by Springer Science & Business Media. This book was released on 2011-08-21 with total page 484 pages. Available in PDF, EPUB and Kindle. Book excerpt: This teaching monograph on systems approaches to cancer research and clinical applications provides a unique synthesis, by world-class scientists and doctors, of laboratory, computational, and clinical methods, thereby establishing the foundations for major advances not possible with current methods. Specifically, the book: 1) Sets the stage by describing the basis of systems biology and bioinformatics approaches, and the clinical background of cancer in a systems context; 2) Summarizes the laboratory, clinical, data systems analysis and bioinformatics tools, along with infrastructure and resources required; 3) Demonstrates the application of these tools to cancer research; 4) Extends these tools and methods to clinical diagnosis, drug development and treatment applications; and 5) Finishes by exploring longer term perspectives and providing conclusions. This book reviews the state-of-the-art, and goes beyond into new applications. It is written and highly referenced as a textbook and practical guide aimed at students, academics, doctors, clinicians, industrialists and managers in cancer research and therapeutic applications. Ideally, it will set the stage for integration of available knowledge to optimize communication between basic and clinical researchers involved in the ultimate fight against cancer, whatever the field of specific interest, whatever the area of activity within translational research.

Cancer Systems Biology, Bioinformatics and Medicine

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Author :
Publisher : Springer
ISBN 13 : 9789400715660
Total Pages : 484 pages
Book Rating : 4.7/5 (156 download)

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Book Synopsis Cancer Systems Biology, Bioinformatics and Medicine by : Alfredo Cesario

Download or read book Cancer Systems Biology, Bioinformatics and Medicine written by Alfredo Cesario and published by Springer. This book was released on 2011-08-21 with total page 484 pages. Available in PDF, EPUB and Kindle. Book excerpt: This teaching monograph on systems approaches to cancer research and clinical applications provides a unique synthesis, by world-class scientists and doctors, of laboratory, computational, and clinical methods, thereby establishing the foundations for major advances not possible with current methods. Specifically, the book: 1) Sets the stage by describing the basis of systems biology and bioinformatics approaches, and the clinical background of cancer in a systems context; 2) Summarizes the laboratory, clinical, data systems analysis and bioinformatics tools, along with infrastructure and resources required; 3) Demonstrates the application of these tools to cancer research; 4) Extends these tools and methods to clinical diagnosis, drug development and treatment applications; and 5) Finishes by exploring longer term perspectives and providing conclusions. This book reviews the state-of-the-art, and goes beyond into new applications. It is written and highly referenced as a textbook and practical guide aimed at students, academics, doctors, clinicians, industrialists and managers in cancer research and therapeutic applications. Ideally, it will set the stage for integration of available knowledge to optimize communication between basic and clinical researchers involved in the ultimate fight against cancer, whatever the field of specific interest, whatever the area of activity within translational research.

Systems Biology in Cancer Research and Drug Discovery

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Publisher : Springer Science & Business Media
ISBN 13 : 9400748183
Total Pages : 424 pages
Book Rating : 4.4/5 (7 download)

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Book Synopsis Systems Biology in Cancer Research and Drug Discovery by : Asfar S Azmi

Download or read book Systems Biology in Cancer Research and Drug Discovery written by Asfar S Azmi and published by Springer Science & Business Media. This book was released on 2012-09-29 with total page 424 pages. Available in PDF, EPUB and Kindle. Book excerpt: Systems Biology in Cancer Research and Drug Discovery provides a unique collection of chapters, by world-class researchers, describing the use of integrated systems biology and network modeling in the cancer field where traditional tools have failed to deliver expected promise. This book touches four applications/aspects of systems biology (i) in understanding aberrant signaling in cancer (ii) in identifying biomarkers and prognostic markers especially focused on angiogenesis pathways (iii) in unwinding microRNAs complexity and (iv) in anticancer drug discovery and in clinical trial design. This book reviews the state-of-the-art knowledge and touches upon cutting edge newer and improved applications especially in the area of network modeling. It is aimed at an audience ranging from students, academics, basic researcher and clinicians in cancer research. This book is expected to benefit the field of translational cancer medicine by bridging the gap between basic researchers, computational biologists and clinicians who have one ultimate goal and that is to defeat cancer.

Cancer Systems Biology

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Publisher : Humana
ISBN 13 : 9781493985036
Total Pages : 402 pages
Book Rating : 4.9/5 (85 download)

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Book Synopsis Cancer Systems Biology by : Louise von Stechow

Download or read book Cancer Systems Biology written by Louise von Stechow and published by Humana. This book was released on 2019-06-04 with total page 402 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book comprises protocols describing systems biology methodologies and computational tools, offering a variety of ways to analyze different types of high-throughput cancer data. Chapters give an overview over data types available in large-scale data repositories and state-of-the-art methods used in the field of cancer systems biology. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Cancer Systems Biology : Methods and Protocols aims to ensure successful results in the further study of this vital field. The chapters "Identifying Genetic Dependencies in Cancer by Analyzing siRNA Screens in Tumor Cell Line Panels", "Perseus: A Bioinformatics Platform for Integrative Analysis of Proteomics Data in Cancer Research" and "Phosphoproteomics-based Profiling of Kinase Activities in Cancer Cells" are available open access under a CC BY 4.0 license via link.springer.com.

Cancer Systems Biology

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Publisher : CRC Press
ISBN 13 : 9781439811863
Total Pages : 456 pages
Book Rating : 4.8/5 (118 download)

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Book Synopsis Cancer Systems Biology by : Edwin Wang

Download or read book Cancer Systems Biology written by Edwin Wang and published by CRC Press. This book was released on 2010-05-04 with total page 456 pages. Available in PDF, EPUB and Kindle. Book excerpt: The unprecedented amount of data produced with high-throughput experimentation forces biologists to employ mathematical representation and computation methods to glean meaningful information in systems-level biology. Applying this approach to the underlying molecular mechanisms of tumorigenesis, cancer researchers can uncover a series of new discov

Computational Systems Biology of Cancer

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Publisher : CRC Press
ISBN 13 : 1439831440
Total Pages : 463 pages
Book Rating : 4.4/5 (398 download)

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Book Synopsis Computational Systems Biology of Cancer by : Emmanuel Barillot

Download or read book Computational Systems Biology of Cancer written by Emmanuel Barillot and published by CRC Press. This book was released on 2012-08-25 with total page 463 pages. Available in PDF, EPUB and Kindle. Book excerpt: The future of cancer research and the development of new therapeutic strategies rely on our ability to convert biological and clinical questions into mathematical models—integrating our knowledge of tumour progression mechanisms with the tsunami of information brought by high-throughput technologies such as microarrays and next-generation sequencing. Offering promising insights on how to defeat cancer, the emerging field of systems biology captures the complexity of biological phenomena using mathematical and computational tools. Novel Approaches to Fighting Cancer Drawn from the authors’ decade-long work in the cancer computational systems biology laboratory at Institut Curie (Paris, France), Computational Systems Biology of Cancer explains how to apply computational systems biology approaches to cancer research. The authors provide proven techniques and tools for cancer bioinformatics and systems biology research. Effectively Use Algorithmic Methods and Bioinformatics Tools in Real Biological Applications Suitable for readers in both the computational and life sciences, this self-contained guide assumes very limited background in biology, mathematics, and computer science. It explores how computational systems biology can help fight cancer in three essential aspects: Categorising tumours Finding new targets Designing improved and tailored therapeutic strategies Each chapter introduces a problem, presents applicable concepts and state-of-the-art methods, describes existing tools, illustrates applications using real cases, lists publically available data and software, and includes references to further reading. Some chapters also contain exercises. Figures from the text and scripts/data for reproducing a breast cancer data analysis are available at www.cancer-systems-biology.net.

Computational Systems Biology Approaches in Cancer Research

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Publisher : CRC Press
ISBN 13 : 1000682927
Total Pages : 167 pages
Book Rating : 4.0/5 (6 download)

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Book Synopsis Computational Systems Biology Approaches in Cancer Research by : Inna Kuperstein

Download or read book Computational Systems Biology Approaches in Cancer Research written by Inna Kuperstein and published by CRC Press. This book was released on 2019-09-09 with total page 167 pages. Available in PDF, EPUB and Kindle. Book excerpt: Praise for Computational Systems BiologyApproaches in Cancer Research: "Complex concepts are written clearly and with informative illustrations and useful links. The book is enjoyable to read yet provides sufficient depth to serve as a valuable resource for both students and faculty." — Trey Ideker, Professor of Medicine, UC Xan Diego, School of Medicine "This volume is attractive because it addresses important and timely topics for research and teaching on computational methods in cancer research. It covers a broad variety of approaches, exposes recent innovations in computational methods, and provides acces to source code and to dedicated interactive web sites." — Yves Moreau, Department of Electrical Engineering, SysBioSys Centre for Computational Systems Biology, University of Leuven With the availability of massive amounts of data in biology, the need for advanced computational tools and techniques is becoming increasingly important and key in understanding biology in disease and healthy states. This book focuses on computational systems biology approaches, with a particular lens on tackling one of the most challenging diseases - cancer. The book provides an important reference and teaching material in the field of computational biology in general and cancer systems biology in particular. The book presents a list of modern approaches in systems biology with application to cancer research and beyond. It is structured in a didactic form such that the idea of each approach can easily be grasped from the short text and self-explanatory figures. The coverage of topics is diverse: from pathway resources, through methods for data analysis and single data analysis to drug response predictors, classifiers and image analysis using machine learning and artificial intelligence approaches. Features Up to date using a wide range of approaches Applicationexample in each chapter Online resources with useful applications’

A Practical Guide To Cancer Systems Biology

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Publisher : World Scientific
ISBN 13 : 9813229160
Total Pages : 152 pages
Book Rating : 4.8/5 (132 download)

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Book Synopsis A Practical Guide To Cancer Systems Biology by : Juan Hsueh-fen

Download or read book A Practical Guide To Cancer Systems Biology written by Juan Hsueh-fen and published by World Scientific. This book was released on 2017-11-29 with total page 152 pages. Available in PDF, EPUB and Kindle. Book excerpt: Systems biology combines computational and experimental approaches to analyze complex biological systems and focuses on understanding functional activities from a systems-wide perspective. It provides an iterative process of experimental measurements, data analysis, and computational simulation to model biological behavior. This book provides explained protocols for high-throughput experiments and computational analysis procedures central to cancer systems biology research and education. Readers will learn how to generate and analyze high-throughput data, therapeutic target protein structure modeling and docking simulation for drug discovery. This is the first practical guide for students and scientists who wish to become systems biologists or utilize the approach for cancer research. Contents: Introduction to Cancer Systems Biology (Hsueh-Fen Juan and Hsuan-Cheng Huang)Transcriptome Analysis: Library Construction (Hsin-Yi Chang and Hsueh-Fen Juan)Quantitative Proteome: The Isobaric Tags for Relative and Absolute Quantitation (iTRAQ) (Yi-Hsuan Wu and Hsueh-Fen Juan)Phosphoproteome: Sample Preparation (Chia-Wei Hu and Hsueh-Fen Juan)Transcriptomic Data Analysis: RNA-Seq Analysis Using Galaxy (Chia-Lang Hsu and Chantal Hoi Yin Cheung)Proteomic Data Analysis: Functional Enrichment (Hsin-Yi Chang and Hsueh-Fen Juan)Phosphorylation Data Analysis (Chia-Lang Hsu and Wei-Hsuan Wang)Pathway and Network Analysis (Chen-Tsung Huang and Hsueh-Fen Juan)Dynamic Modeling (Yu-Chao Wang)Protein Structure Modeling (Chia-Hsien Lee and Hsueh-Fen Juan)Docking Simulation (Chia-Hsien Lee and Hsueh-Fen Juan) Readership: Graduate students and researchers entering the cancer systems biology field. Keywords: Systems Biology;Transcriptomics;Proteomics;Network Biology;Dynamic Modeling;Protein Structure Modeling;Docking Simulation;BioinformaticsReview: Key Features: Written by two active researchers in the fieldCovers both experimental and computational areas in cancer systems biologyStep-by-step instructions help beginners who are interested in creating biological data and analyzing the data by themselvesReaders will gain the skills to generate and analyze omics data and discover potential therapeutic targets and drug candidates

Systems Biology

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Publisher : World Scientific
ISBN 13 : 9814324450
Total Pages : 339 pages
Book Rating : 4.8/5 (143 download)

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Book Synopsis Systems Biology by : Hsueh-Fen Juan

Download or read book Systems Biology written by Hsueh-Fen Juan and published by World Scientific. This book was released on 2012 with total page 339 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume presents an overview of recent developments in systems biology and their applications in cancer-related research. The ongoing advances in our understanding of genomics and proteomics, coupled with the development of new and more robust tools, have led to an emphasis on analyzing biological systems at multiple levels. Thus, there is a need to integrate different types of data into a comprehensive "systems" view. Written by active researchers in the emerging areas, this book gives senior undergraduate students, graduate students and new researchers an idea of where the frontiers of systems biology are and an opportunity to learn high-throughput techniques in use. One of the particular emphases of the book is to elucidate the molecular mechanisms in cancer. The discovery of biomarkers and anti-cancer drugs using systems biology approach is also extensively discussed.

Computational Biology

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Publisher : Springer Science & Business Media
ISBN 13 : 1441908110
Total Pages : 309 pages
Book Rating : 4.4/5 (419 download)

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Book Synopsis Computational Biology by : Tuan Pham

Download or read book Computational Biology written by Tuan Pham and published by Springer Science & Business Media. This book was released on 2009-09-23 with total page 309 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume covers techniques in computational biology and their applications in oncology. It details advanced statistical methods, heuristic algorithms, cluster analysis, data modeling, and image and pattern analysis applied to cancer research.

Systems Biology of Cancer

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Publisher : Cambridge University Press
ISBN 13 : 0521493390
Total Pages : 597 pages
Book Rating : 4.5/5 (214 download)

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Book Synopsis Systems Biology of Cancer by : Sam Thiagalingam

Download or read book Systems Biology of Cancer written by Sam Thiagalingam and published by Cambridge University Press. This book was released on 2015-04-09 with total page 597 pages. Available in PDF, EPUB and Kindle. Book excerpt: An overview of the current systems biology-based knowledge and the experimental approaches for deciphering the biological basis of cancer.

Cancer Bioinformatics

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Publisher : Springer
ISBN 13 : 1493913816
Total Pages : 368 pages
Book Rating : 4.4/5 (939 download)

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Book Synopsis Cancer Bioinformatics by : Ying Xu

Download or read book Cancer Bioinformatics written by Ying Xu and published by Springer. This book was released on 2014-08-30 with total page 368 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides a framework for computational researchers studying the basics of cancer through comparative analyses of omic data. It discusses how key cancer pathways can be analyzed and discovered to derive new insights into the disease and identifies diagnostic and prognostic markers for cancer. Chapters explain the basic cancer biology and how cancer develops, including the many potential survival routes. The examination of gene-expression patterns uncovers commonalities across multiple cancers and specific characteristics of individual cancer types. The authors also treat cancer as an evolving complex system, explore future case studies, and summarize the essential online data sources. Cancer Bioinformatics is designed for practitioners and researchers working in cancer research and bioinformatics. It is also suitable as a secondary textbook for advanced-level students studying computer science, biostatistics or biomedicine.

Recent Developments in Cancer Systems Biology

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Publisher : MDPI
ISBN 13 : 3036514724
Total Pages : 272 pages
Book Rating : 4.0/5 (365 download)

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Book Synopsis Recent Developments in Cancer Systems Biology by : Raghu Sinha

Download or read book Recent Developments in Cancer Systems Biology written by Raghu Sinha and published by MDPI. This book was released on 2021-08-18 with total page 272 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book includes original research articles and reviews to update readers on the state of the art systems approach to not only discover novel diagnostic and prognostic biomarkers for several cancer types, but also evaluate methodologies to map out important genomic signatures. In addition, therapeutic targets and drug repurposing have been emphasized for a variety of cancer types. In particular, new and established researchers who desire to learn about cancer systems biology and why it is possibly the leading front to a personalized medicine approach will enjoy reading this book.

Systems Biology of Tumor Physiology

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Publisher : Springer
ISBN 13 : 3319256017
Total Pages : 56 pages
Book Rating : 4.3/5 (192 download)

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Book Synopsis Systems Biology of Tumor Physiology by : David H. Nguyen

Download or read book Systems Biology of Tumor Physiology written by David H. Nguyen and published by Springer. This book was released on 2015-12-11 with total page 56 pages. Available in PDF, EPUB and Kindle. Book excerpt: This exciting SpringerBrief presents evidence for new ideas that will challenge several theories of how cancer biology is understood. Cancer biology has undergone several intellectual revolutions in the past 50 years. A mutation-centric view of cancer has given way to the tumor microenvironment view. Reductionistic studies of one gene at a time have given way to systems biology approaches that analyze the whole genome (omics) at the same time. However, this text combines the complex levels studying cancer at the molecular biology level, endocrinology level, and transcriptomics level. What researchers are now realizing is that there is a need to combine omics with physiology concepts in order to better understand cancer and this book will give insight to the merging of these two fields in order to define how cancer is studied in the future.​

Cancer Informatics in the Post Genomic Era

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Publisher : Springer Science & Business Media
ISBN 13 : 0387693211
Total Pages : 180 pages
Book Rating : 4.3/5 (876 download)

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Book Synopsis Cancer Informatics in the Post Genomic Era by : Igor Jurisica

Download or read book Cancer Informatics in the Post Genomic Era written by Igor Jurisica and published by Springer Science & Business Media. This book was released on 2007-05-04 with total page 180 pages. Available in PDF, EPUB and Kindle. Book excerpt: Cancer Informatics in Post-Genomic Era provides both the necessary methodology and practical information tools for analyzing data in the field of medical information science. This, of course, requires analytic tools. Those tools are garnered by developing and assessing methods and systems for the acquisition, processing, and interpretation of patient data, aided by scientific discovery. Key challenges in this field include integrating research and clinical care, sharing data, and establishing partnerships within and across sectors of patient diagnosis and treatment.

Cancer Systems and Integrative Biology

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Publisher : Springer Nature
ISBN 13 : 1071631632
Total Pages : 377 pages
Book Rating : 4.0/5 (716 download)

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Book Synopsis Cancer Systems and Integrative Biology by : Usha N. Kasid

Download or read book Cancer Systems and Integrative Biology written by Usha N. Kasid and published by Springer Nature. This book was released on 2023-05-16 with total page 377 pages. Available in PDF, EPUB and Kindle. Book excerpt: This thorough volume explores recent advances that have revolutionized the field of precision oncology. The chapters, contributed by experts in the areas of cancer systems and integrative biology, provide hands-on guidance toward developing tools to monitor spatial and temporal changes in tumors, tracking tumor markers in blood, and ultimately developing precision medicine to combat cancer in real time. Written for the highly successful Methods in Molecular Biology series, chapters include the kind of detailed implementation advice that ensures successful results. Authoritative and informative, Cancer Systems and Integrative Biology serves as an invaluable resource for researchers, pharmaceutical scientists, and oncologists interested in expanding their knowledge base in the current developments in cancer research.

Systems Biology of Tumor Dormancy

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Publisher : Springer Science & Business Media
ISBN 13 : 1461414458
Total Pages : 298 pages
Book Rating : 4.4/5 (614 download)

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Book Synopsis Systems Biology of Tumor Dormancy by : Heiko Enderling

Download or read book Systems Biology of Tumor Dormancy written by Heiko Enderling and published by Springer Science & Business Media. This book was released on 2012-11-09 with total page 298 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume is based on the Workshop on Systems Biology of Tumor Dormancy meeting, held July 25th to July 28th, 2011. The first annual CCSB workshop brought together biologists, clinicians, mathematicians, and computer scientists to discuss various aspects of tumor dormancy and develop novel mathematical/computational models with the keynote speakers. Specific topics included the angiogenic switch, immune system interactions, cancer stem cells and signaling.