Biological Macromolecular Dynamics

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Dynamics and the Problem of Recognition in Biological Macromolecules

Author : Oleg Jardetzky
Publisher : Springer Science & Business Media
ISBN 13 : 1461558395
Total Pages : 308 pages
Book Rating : 4.4/5 (615 download)

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Book Synopsis Dynamics and the Problem of Recognition in Biological Macromolecules by : Oleg Jardetzky

Download or read book Dynamics and the Problem of Recognition in Biological Macromolecules written by Oleg Jardetzky and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 308 pages. Available in PDF, EPUB and Kindle. Book excerpt: From within complex structures of organisms and cells down to the molecular level, biological processes all involve movement. Muscular fibers slide on each other to activate the muscle, as polymerases do along nucleic acids for replicating and transcribing the genetic material. Cells move and organize themselves into organs by recognizing each other through macromolecular surface-specific interactions. These recognition processes involve the mu tual adaptation of structures that rely on their flexibility. All sorts of conformational changes occur in proteins involved in through-membrane signal transmission, showing another aspect of the flexibility of these macromolecules. The movement and flexibility are inscribed in the polymeric nature of essential biological macromolecules such as proteins and nucleic acids. For instance, the well-defined structures formed by the long protein chain are held together by weak noncovalent interac tions that design a complex potential well in which the protein floats, permanently fluctuating between several micro- or macroconformations in a wide range of frequencies and ampli tudes. The inherent mobility of biomolecular edifices may be crucial to the adaptation of their structures to particular functions. Progress in methods for investigating macromolecular structures and dynamics make this hypothesis not only attractive but more and more testable.

Molecular Dynamics

Author : Lichang Wang
Publisher : BoD – Books on Demand
ISBN 13 : 9535104446
Total Pages : 448 pages
Book Rating : 4.5/5 (351 download)

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Book Synopsis Molecular Dynamics by : Lichang Wang

Download or read book Molecular Dynamics written by Lichang Wang and published by BoD – Books on Demand. This book was released on 2012-04-11 with total page 448 pages. Available in PDF, EPUB and Kindle. Book excerpt: Molecular Dynamics is a two-volume compendium of the ever-growing applications of molecular dynamics simulations to solve a wider range of scientific and engineering challenges. The contents illustrate the rapid progress on molecular dynamics simulations in many fields of science and technology, such as nanotechnology, energy research, and biology, due to the advances of new dynamics theories and the extraordinary power of today's computers. This second book begins with an introduction of molecular dynamics simulations to macromolecules and then illustrates the computer experiments using molecular dynamics simulations in the studies of synthetic and biological macromolecules, plasmas, and nanomachines. Coverage of this book includes: Complex formation and dynamics of polymers Dynamics of lipid bilayers, peptides, DNA, RNA, and proteins Complex liquids and plasmas Dynamics of molecules on surfaces Nanofluidics and nanomachines

Dynamics of Biological Macromolecules by Neutron Scattering

Author : Salvatore Magazù
Publisher : Bentham Science Publishers
ISBN 13 : 1608052192
Total Pages : 118 pages
Book Rating : 4.6/5 (8 download)

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Book Synopsis Dynamics of Biological Macromolecules by Neutron Scattering by : Salvatore Magazù

Download or read book Dynamics of Biological Macromolecules by Neutron Scattering written by Salvatore Magazù and published by Bentham Science Publishers. This book was released on 2011 with total page 118 pages. Available in PDF, EPUB and Kindle. Book excerpt: Dynamics of Biological Macromolecules by Neutron Scattering provides insight into the study of the dynamics of biological macromolecules by neutron scattering techniques. The applicability of neutron scattering to expanding fields of biological studies is

Dynamics, Structure, and Function of Biological Macromolecules

Author : Oleg Jardetzky
Publisher : IOS Press
ISBN 13 : 9781586030322
Total Pages : 212 pages
Book Rating : 4.0/5 (33 download)

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Book Synopsis Dynamics, Structure, and Function of Biological Macromolecules by : Oleg Jardetzky

Download or read book Dynamics, Structure, and Function of Biological Macromolecules written by Oleg Jardetzky and published by IOS Press. This book was released on 2001 with total page 212 pages. Available in PDF, EPUB and Kindle. Book excerpt: A collection of articles looking at modern structural biology, summarizing the applications of physical methods - such as x-ray diffraction, high resolution nuclear magnetic resonance and molecular dynamics - to the study of protein structure and dynamics. There is a review of contemporary thoughts within the field, looking at the mechanisms of alloateric transitions and allosteric control, the transmission of information within protein structures and the role of dynamics in determining the specificity of protein - ligand interactions. There is also a look at future innovations.

Molecular Dynamics

Author : Lichang Wang
Publisher : IntechOpen
ISBN 13 : 9789535104445
Total Pages : 446 pages
Book Rating : 4.1/5 (44 download)

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Book Synopsis Molecular Dynamics by : Lichang Wang

Download or read book Molecular Dynamics written by Lichang Wang and published by IntechOpen. This book was released on 2012-04-11 with total page 446 pages. Available in PDF, EPUB and Kindle. Book excerpt: Molecular Dynamics is a two-volume compendium of the ever-growing applications of molecular dynamics simulations to solve a wider range of scientific and engineering challenges. The contents illustrate the rapid progress on molecular dynamics simulations in many fields of science and technology, such as nanotechnology, energy research, and biology, due to the advances of new dynamics theories and the extraordinary power of today's computers. This second book begins with an introduction of molecular dynamics simulations to macromolecules and then illustrates the computer experiments using molecular dynamics simulations in the studies of synthetic and biological macromolecules, plasmas, and nanomachines. Coverage of this book includes: Complex formation and dynamics of polymers Dynamics of lipid bilayers, peptides, DNA, RNA, and proteins Complex liquids and plasmas Dynamics of molecules on surfaces Nanofluidics and nanomachines

Macromolecular Crystallography

Author : Maria Armenia Carrondo
Publisher : Springer
ISBN 13 : 9400725302
Total Pages : 213 pages
Book Rating : 4.4/5 (7 download)

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Book Synopsis Macromolecular Crystallography by : Maria Armenia Carrondo

Download or read book Macromolecular Crystallography written by Maria Armenia Carrondo and published by Springer. This book was released on 2011-12-01 with total page 213 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume is a collection of the contributions presented at the 42nd Erice Crystallographic Course whose main objective was to train the younger generation on advanced methods and techniques for examining structural and dynamic aspects of biological macromolecules. The papers review the techniques used to study protein assemblies and their dynamics, including X-ray diffraction and scattering, electron cryo-electron microscopy, electro nanospray mass spectrometry, NMR, protein docking and molecular dynamics. A key theme throughout the book is the dependence of modern structural science on multiple experimental and computational techniques, and it is the development of these techniques and their integration that will take us forward in the future.

Water and Biological Macromolecules

Author : Westhof
Publisher : CRC Press
ISBN 13 : 9780849375705
Total Pages : 492 pages
Book Rating : 4.3/5 (757 download)

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Book Synopsis Water and Biological Macromolecules by : Westhof

Download or read book Water and Biological Macromolecules written by Westhof and published by CRC Press. This book was released on 1993-08-16 with total page 492 pages. Available in PDF, EPUB and Kindle. Book excerpt: Water and Biological Macromolecules presents an excellent description of the structural aspects of water molecules around biological macromolecules. Topics discussed include the properties of water in solid and liquid states; proteins, nucleic acids, polysaccharides, and lipids; and theoretical approaches for understanding the macroscopic observations and integrating microscopic descriptions. The nature and roles of hydration forces in macromolecular complexation and cell-cell interactions are explained, in addition to phenomena such as entropy-enthalpy compensation and the thermodynamic treatment of water bridging. Water and Biological Macromolecules will be a valuable reference for biophysicists, biochemists, and macromolecular biologists.

Biological Macromolecular Dynamics

Author : Stephen Cusack
Publisher :
ISBN 13 :
Total Pages : 202 pages
Book Rating : 4.F/5 ( download)

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Book Synopsis Biological Macromolecular Dynamics by : Stephen Cusack

Download or read book Biological Macromolecular Dynamics written by Stephen Cusack and published by . This book was released on 1997 with total page 202 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Molecular Dynamics

Author : Goodfellow
Publisher : CRC Press
ISBN 13 : 9780849371196
Total Pages : 224 pages
Book Rating : 4.3/5 (711 download)

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Book Synopsis Molecular Dynamics by : Goodfellow

Download or read book Molecular Dynamics written by Goodfellow and published by CRC Press. This book was released on 1990 with total page 224 pages. Available in PDF, EPUB and Kindle. Book excerpt: Molecular dynamics is an important technique with applications in many areas, including drug design, protein engineering, macromolecular structure determination, and molecular recognition. This book concentrates on these exciting applications while briefly summarizing the essential mathematical background. Using standard molecular dynamics and related algorithms, results are presented on protein, carbohydrate, and nucleotide modeling and dynamics. Chapters covering relatively new applications, such as simulated annealing protocol and the free energy perturbation method, are also included. Molecular biologists, biochemists, and researchers in structural molecular biology, chemistry, crystallography, and computer modelling will find this book a useful reference resource.

Essentials of Chemical Biology

Author : Andrew D. Miller
Publisher : John Wiley & Sons
ISBN 13 : 1118687833
Total Pages : 620 pages
Book Rating : 4.1/5 (186 download)

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Book Synopsis Essentials of Chemical Biology by : Andrew D. Miller

Download or read book Essentials of Chemical Biology written by Andrew D. Miller and published by John Wiley & Sons. This book was released on 2013-05-03 with total page 620 pages. Available in PDF, EPUB and Kindle. Book excerpt: "This excellent work fills the need for an upper-level graduate course resource that examines the latest biochemical, biophysical, and molecular biological methods for analyzing the structures and physical properties of biomolecules... This reviewer showed [the book] to several of his senior graduate students, and they unanimously gave the book rave reviews. Summing Up: Highly recommended..." CHOICE Chemical biology is a rapidly developing branch of chemistry, which sets out to understand the way biology works at the molecular level. Fundamental to chemical biology is a detailed understanding of the syntheses, structures and behaviours of biological macromolecules and macromolecular lipid assemblies that together represent the primary constituents of all cells and all organisms. The subject area of chemical biology bridges many different disciplines and is fast becoming an integral part of academic and commercial research. This textbook is designed specifically as a key teaching resource for chemical biology that is intended to build on foundations lain down by introductory physical and organic chemistry courses. This book is an invaluable text for advanced undergraduates taking biological, bioorganic, organic and structural chemistry courses. It is also of interest to biochemists and molecular biologists, as well as professionals within the medical and pharmaceutical industry. Key Features: A comprehensive introduction to this dynamic area of chemistry, which will equip chemists for the task of understanding and studying the underlying principles behind the functioning of biological macro molecules, macromolecular lipid assemblies and cells. Covers many basic concepts and ideas associated with the study of the interface between chemistry and biology. Includes pedagogical features such as: key examples, glossary of equations, further reading and links to websites. Clearly written and richly illustrated in full colour.

Methods in Molecular Biophysics

Author : Nathan R. Zaccai
Publisher : Cambridge University Press
ISBN 13 : 1108508804
Total Pages : 710 pages
Book Rating : 4.1/5 (85 download)

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Book Synopsis Methods in Molecular Biophysics by : Nathan R. Zaccai

Download or read book Methods in Molecular Biophysics written by Nathan R. Zaccai and published by Cambridge University Press. This book was released on 2017-05-18 with total page 710 pages. Available in PDF, EPUB and Kindle. Book excerpt: Current techniques for studying biological macromolecules and their interactions are based on the application of physical methods, ranging from classical thermodynamics to more recently developed techniques for the detection and manipulation of single molecules. Reflecting the advances made in biophysics research over the past decade, and now including a new section on medical imaging, this new edition describes the physical methods used in modern biology. All key techniques are covered, including mass spectrometry, hydrodynamics, microscopy and imaging, diffraction and spectroscopy, electron microscopy, molecular dynamics simulations and nuclear magnetic resonance. Each method is explained in detail using examples of real-world applications. Short asides are provided throughout to ensure that explanations are accessible to life scientists, physicists and those with medical backgrounds. The book remains an unparalleled and comprehensive resource for graduate students of biophysics and medical physics in science and medical schools, as well as for research scientists looking for an introduction to techniques from across this interdisciplinary field.

Structure, Dynamics and Function of Biological Macromolecules and Assemblies

Author : Joseph D. Puglisi
Publisher :
ISBN 13 :
Total Pages : 204 pages
Book Rating : 4.X/5 (4 download)

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Book Synopsis Structure, Dynamics and Function of Biological Macromolecules and Assemblies by : Joseph D. Puglisi

Download or read book Structure, Dynamics and Function of Biological Macromolecules and Assemblies written by Joseph D. Puglisi and published by . This book was released on 2005 with total page 204 pages. Available in PDF, EPUB and Kindle. Book excerpt: Proceedings of the International School of Structural Biology and Magnetic Resonance, held at Erice, Italy, in 2003.

Essentials of Chemical Biology

Author : Andrew D. Miller
Publisher : John Wiley & Sons
ISBN 13 : 1119437849
Total Pages : 564 pages
Book Rating : 4.1/5 (194 download)

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Book Synopsis Essentials of Chemical Biology by : Andrew D. Miller

Download or read book Essentials of Chemical Biology written by Andrew D. Miller and published by John Wiley & Sons. This book was released on 2023-12-27 with total page 564 pages. Available in PDF, EPUB and Kindle. Book excerpt: Essentials of Chemical Biology Discover a detailed knowledge of concepts and techniques that shape this unique multi-discipline Chemical Biology is devoted to understanding the way that Biology works at the molecular level. This is a problem-driven multi-discipline, incorporating as it does Organic, Physical, Inorganic, and Analytical Chemistry alongside newer emerging molecular disciplines. In recent years, Chemical Biology has emerged as a vibrant and growing multi-discipline distinct from Biochemistry that is focused on the quantitative analyses of the structures and functions of biological macromolecules and macromolecular lipid assemblies, at first in isolation, then in vitro and in vivo. The second edition of the Essentials of Chemical Biology begins with a thorough introduction to the structure of biological macromolecules and macromolecular lipid assemblies, before moving on to the principles of chemical and biological synthesis, followed by descriptions of a comprehensive variety of research techniques and experimental methods. In addition, the second edition now includes new sections on the behaviour of biological macromolecules and macromolecular lipid assemblies in cells in vitro and in organisms in vivo. Given this, the second edition of the Essentials of Chemical Biology promises to cement itself as the leading introduction to Chemical Biology, incorporating descriptions of cutting-edge research wherever appropriate. Hence, readers of the second edition of the Essentials of Chemical Biology will find: a general expansion in understanding of basic molecular mechanisms in Biology moving towards cellular and organismal mechanisms entirely new chapters covering miniaturization and array technologies, Chemical Cell Biology, and the interface between Chemical Biology and Nanotechnology updates to chapters reflecting recent research developments an increased engagement with medical applications Essentials of Chemical Biology is ideal for advanced undergraduates or (post) graduate students in Chemical Biology and adjacent fields.

Structure and Dynamics of Nucleic Acids, Proteins, and Membranes

Author : E. Clementi
Publisher : Springer Science & Business Media
ISBN 13 : 1468453084
Total Pages : 454 pages
Book Rating : 4.4/5 (684 download)

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Book Synopsis Structure and Dynamics of Nucleic Acids, Proteins, and Membranes by : E. Clementi

Download or read book Structure and Dynamics of Nucleic Acids, Proteins, and Membranes written by E. Clementi and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 454 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume collects a number of the invited lectures and a few selected contrib utions presented at the International Symposium on Structure and Dynamics of Nucleic Acids, Proteins and Membranes held August 31st through September 5th, 1986, in Riva del Garda, Italy. The title of the conference as well as a number of the topics covered represent a continuation of two previous conferences, the first held in 1982 at the University of California in San Diego, and the second in 1984 in Rome at the Accademia dei Lincei. These two earlier conferences have been documented in Structure and Dynamics: Nucleic Acids and Proteins, edited by E. Clementi and R. H. Sarma, Adenine Press, New York, 1983, and Structure and Motion: Membranes, Nucleic Acids and Proteins, edited by E. Clementi, G. Corongiu, M. H. Sarma and R. H. Sarma, Adenine Press, New York, 1985. At this conference in Riva del Garda we were very hesitant to keep the name of the conference the same as the two previous ones. Indeed, a number of topics discussed in this conference were not included in the previous ones and even the emphasis of this gathering is only partly reflected in the conference title. An alternative title would have been Structure and Dynamics of Nucleic Acids, Proteins, and Higher Functions, or, possibly, "higher components" rather than "higher functions.

Molecular Level Atomistic and Structural Insights on Biological Macromolecules, Inhibition, and Dynamics Studies

Author : Chandrabose Selvaraj
Publisher : Frontiers Media SA
ISBN 13 : 2832546277
Total Pages : 179 pages
Book Rating : 4.8/5 (325 download)

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Book Synopsis Molecular Level Atomistic and Structural Insights on Biological Macromolecules, Inhibition, and Dynamics Studies by : Chandrabose Selvaraj

Download or read book Molecular Level Atomistic and Structural Insights on Biological Macromolecules, Inhibition, and Dynamics Studies written by Chandrabose Selvaraj and published by Frontiers Media SA. This book was released on 2024-03-14 with total page 179 pages. Available in PDF, EPUB and Kindle. Book excerpt: Everything in a living organism relies on biological macromolecules, which have the role of enzymatic chemical transformations, formation of structures, transportation, catalysis, and regulation of biological processes. They are complex biological structures that require an atomistic understanding. A molecular understanding of biological macromolecules has had a massive impact on the pharmaceutical, biotechnological, and chemical industries. Specifically, new enzymatic structures are being discovered through various experimental and computational methods, by describing an atomistic-level insight into function, mechanism, role in reactions and their inhibition. Those atom-level illustrations are mainly focused through enzyme kinetics, enzyme inhibition, mutational and conformational analysis through quantum mechanical and molecular dynamics methods.

Structure and Dynamics of Macromolecules: Absorption and Fluorescence Studies

Author : J.R. Albani
Publisher : Elsevier
ISBN 13 : 0080474489
Total Pages : 427 pages
Book Rating : 4.0/5 (84 download)

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Book Synopsis Structure and Dynamics of Macromolecules: Absorption and Fluorescence Studies by : J.R. Albani

Download or read book Structure and Dynamics of Macromolecules: Absorption and Fluorescence Studies written by J.R. Albani and published by Elsevier. This book was released on 2011-08-30 with total page 427 pages. Available in PDF, EPUB and Kindle. Book excerpt: Structure and Dynamics of Macromolecules: Absorption and Fluorescence Studies is clearly written and contains invaluable examples, coupled with illustrations that demonstrate a comprehensible analysis and presentation of the data. This book offers practical information on the fundamentals of absorption and fluorescence, showing that it is possible to interpret the same result in different ways. It is an asset to students, professors and researchers wishing to discover or use absorption and fluorescence spectroscopy, and to scientists working on the structure and dynamics of macromolecules.* Offers concise information on the fundamentals of absorption and fluorescence * Critically reviews examples taken from previously published literature * Highly illustrated, it is suitable for academic and institutional libraries and government laboratories

Biomolecular Crystallography

Author : Bernhard Rupp
Publisher : Garland Science
ISBN 13 : 1134064195
Total Pages : 832 pages
Book Rating : 4.1/5 (34 download)

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Book Synopsis Biomolecular Crystallography by : Bernhard Rupp

Download or read book Biomolecular Crystallography written by Bernhard Rupp and published by Garland Science. This book was released on 2009-10-20 with total page 832 pages. Available in PDF, EPUB and Kindle. Book excerpt: Synthesizing over thirty years of advances into a comprehensive textbook, Biomolecular Crystallography describes the fundamentals, practices, and applications of protein crystallography. Illustrated in full-color by the author, the text describes mathematical and physical concepts in accessible and accurate language. Biomolecular Crystallography will be a valuable resource for advanced undergraduate and graduate students and practitioners in structural biology, crystallography, and structural bioinformatics.