Advances In Single Molecule Real Time Smrt Sequencing

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Advances in Single Molecule, Real-Time (SMRT) Sequencing

Author : Adam Ameur
Publisher : MDPI
ISBN 13 : 3039217003
Total Pages : 128 pages
Book Rating : 4.0/5 (392 download)

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Book Synopsis Advances in Single Molecule, Real-Time (SMRT) Sequencing by : Adam Ameur

Download or read book Advances in Single Molecule, Real-Time (SMRT) Sequencing written by Adam Ameur and published by MDPI. This book was released on 2019-11-18 with total page 128 pages. Available in PDF, EPUB and Kindle. Book excerpt: PacBio’s single-molecule real-time (SMRT) sequencing technology offers important advantages over the short-read DNA sequencing technologies that currently dominate the market. This includes exceptionally long read lengths (20 kb or more), unparalleled consensus accuracy, and the ability to sequence native, non-amplified DNA molecules. From fungi to insects to humans, long reads are now used to create highly accurate reference genomes by de novo assembly of genomic DNA and to obtain a comprehensive view of transcriptomes through the sequencing of full-length cDNAs. Besides reducing biases, sequencing native DNA also permits the direct measurement of DNA base modifications. Therefore, SMRT sequencing has become an attractive technology in many fields, such as agriculture, basic science, and medical research. The boundaries of SMRT sequencing are continuously being pushed by developments in bioinformatics and sample preparation. This book contains a collection of articles showcasing the latest developments and the breadth of applications enabled by SMRT sequencing technology.

Biotechnological Advances for Disease Tolerance in Plants

Author : Kashmir Singh
Publisher : Springer Nature
ISBN 13 : 9819988748
Total Pages : 404 pages
Book Rating : 4.8/5 (199 download)

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Book Synopsis Biotechnological Advances for Disease Tolerance in Plants by : Kashmir Singh

Download or read book Biotechnological Advances for Disease Tolerance in Plants written by Kashmir Singh and published by Springer Nature. This book was released on with total page 404 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Advances in Molecular Pathology

Author : Gregory J. Tsongalis
Publisher : Elsevier Health Sciences
ISBN 13 : 0323940404
Total Pages : 177 pages
Book Rating : 4.3/5 (239 download)

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Book Synopsis Advances in Molecular Pathology by : Gregory J. Tsongalis

Download or read book Advances in Molecular Pathology written by Gregory J. Tsongalis and published by Elsevier Health Sciences. This book was released on 2022-11-01 with total page 177 pages. Available in PDF, EPUB and Kindle. Book excerpt: Advances in Molecular Pathology reviews the year's most important findings and updates within the field in order to provide molecular pathologists with the current clinical information they need to improve patient outcomes. A distinguished editorial board, led by Dr. Gregory Tsongalis, identifies key areas of major progress and controversy and invites preeminent specialists to contribute original articles devoted to these topics. These insightful overviews in molecular pathology inform and enhance clinical practice by bringing concepts to a clinical level and exploring their everyday impact on patient care. - Provides in-depth, clinical reviews in molecular pathology, providing actionable insights for clinical practice. - Presents the latest information in the field under the leadership of an experienced editorial team. Authors synthesize and distill the latest research and practice guidelines to create these timely topic-based reviews.

Metagenomics for Microbiology

Author : Jacques Izard
Publisher : Academic Press
ISBN 13 : 0124105084
Total Pages : 188 pages
Book Rating : 4.1/5 (241 download)

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Book Synopsis Metagenomics for Microbiology by : Jacques Izard

Download or read book Metagenomics for Microbiology written by Jacques Izard and published by Academic Press. This book was released on 2014-11-07 with total page 188 pages. Available in PDF, EPUB and Kindle. Book excerpt: Concisely discussing the application of high throughput analysis to move forward our understanding of microbial principles, Metagenomics for Microbiology provides a solid base for the design and analysis of omics studies for the characterization of microbial consortia. The intended audience includes clinical and environmental microbiologists, molecular biologists, infectious disease experts, statisticians, biostatisticians, and public health scientists. This book focuses on the technological underpinnings of metagenomic approaches and their conceptual and practical applications. With the next-generation genomic sequencing revolution increasingly permitting researchers to decipher the coding information of the microbes living with us, we now have a unique capacity to compare multiple sites within individuals and at higher resolution and greater throughput than hitherto possible. The recent articulation of this paradigm points to unique possibilities for investigation of our dynamic relationship with these cellular communities, and excitingly the probing of their therapeutic potential in disease prevention or treatment of the future. - Expertly describes the latest metagenomic methodologies and best-practices, from sample collection to data analysis for taxonomic, whole shotgun metagenomic, and metatranscriptomic studies - Includes clear-headed pointers and quick starts to direct research efforts and increase study efficacy, eschewing ponderous prose - Presented topics include sample collection and preparation, data generation and quality control, third generation sequencing, advances in computational analyses of shotgun metagenomic sequence data, taxonomic profiling of shotgun data, hypothesis testing, and mathematical and computational analysis of longitudinal data and time series. Past-examples and prospects are provided to contextualize the applications.

Genomics and Biotechnological Advances in Veterinary, Poultry, and Fisheries

Author : Yashpal Singh Malik
Publisher : Academic Press
ISBN 13 : 0128163534
Total Pages : 565 pages
Book Rating : 4.1/5 (281 download)

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Book Synopsis Genomics and Biotechnological Advances in Veterinary, Poultry, and Fisheries by : Yashpal Singh Malik

Download or read book Genomics and Biotechnological Advances in Veterinary, Poultry, and Fisheries written by Yashpal Singh Malik and published by Academic Press. This book was released on 2019-09-14 with total page 565 pages. Available in PDF, EPUB and Kindle. Book excerpt: Genomics and Biotechnological Advances in Veterinary, Poultry, and Fisheries is a comprehensive reference for animal biotechnologists, veterinary clinicians, fishery scientists, and anyone who needs to understand the latest advances in the field of next generation sequencing and genomic editing in animals and fish. This essential reference provides information on genomics and the advanced technologies used to enhance the production and management of farm and pet animals, commercial and non-commercial birds, and aquatic animals used for food and research purposes. This resource will help the animal biotechnology research community understand the latest knowledge and trends in this field. - Presents biological applications of cattle, poultry, marine and animal pathogen genomics - Discusses the relevance of biomarkers to improve farm animals and fishery - Includes recent approaches in cloning and transgenic cattle, poultry and fish production

Next Generation Sequencing

Author : Lee-Jun C. Wong
Publisher : Springer Science & Business Media
ISBN 13 : 1461470013
Total Pages : 302 pages
Book Rating : 4.4/5 (614 download)

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Book Synopsis Next Generation Sequencing by : Lee-Jun C. Wong

Download or read book Next Generation Sequencing written by Lee-Jun C. Wong and published by Springer Science & Business Media. This book was released on 2013-05-31 with total page 302 pages. Available in PDF, EPUB and Kindle. Book excerpt: In recent years, owing to the fast development of a variety of sequencing technologies in the post human genome project era, sequencing analysis of a group of target genes, entire protein coding regions of the human genome, and the whole human genome has become a reality. Next Generation Sequencing (NGS) or Massively Parallel Sequencing (MPS) technologies offers a way to screen for mutations in many different genes in a cost and time efficient manner by deep coverage of the target sequences. This novel technology has now been applied to clinical diagnosis of Mendelian disorders of well characterized or undefined diseases, discovery of new disease genes, noninvasive prenatal diagnosis using maternal blood, and population based carrier testing of severe autosomal recessive disorders. This book covers topics of these applications, including potential limitations and expanded application in the future.

The Maize Genome

Author : Jeffrey Bennetzen
Publisher : Springer
ISBN 13 : 3319974270
Total Pages : 390 pages
Book Rating : 4.3/5 (199 download)

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Book Synopsis The Maize Genome by : Jeffrey Bennetzen

Download or read book The Maize Genome written by Jeffrey Bennetzen and published by Springer. This book was released on 2018-11-24 with total page 390 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book discusses advances in our understanding of the structure and function of the maize genome since publication of the original B73 reference genome in 2009, and the progress in translating this knowledge into basic biology and trait improvement. Maize is an extremely important crop, providing a large proportion of the world’s human caloric intake and animal feed, and serving as a model species for basic and applied research. The exceptionally high level of genetic diversity within maize presents opportunities and challenges in all aspects of maize genetics, from sequencing and genotyping to linking genotypes to phenotypes. Topics covered in this timely book range from (i) genome sequencing and genotyping techniques, (ii) genome features such as centromeres and epigenetic regulation, (iii) tools and resources available for trait genomics, to (iv) applications of allele mining and genomics-assisted breeding. This book is a valuable resource for researchers and students interested in maize genetics and genomics.

One-Carbon Group Transferases—Advances in Research and Application: 2012 Edition

Author :
Publisher : ScholarlyEditions
ISBN 13 : 1464995257
Total Pages : 490 pages
Book Rating : 4.4/5 (649 download)

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Book Synopsis One-Carbon Group Transferases—Advances in Research and Application: 2012 Edition by :

Download or read book One-Carbon Group Transferases—Advances in Research and Application: 2012 Edition written by and published by ScholarlyEditions. This book was released on 2012-12-26 with total page 490 pages. Available in PDF, EPUB and Kindle. Book excerpt: One-Carbon Group Transferases—Advances in Research and Application: 2012 Edition is a ScholarlyEditions™ eBook that delivers timely, authoritative, and comprehensive information about One-Carbon Group Transferases. The editors have built One-Carbon Group Transferases—Advances in Research and Application: 2012 Edition on the vast information databases of ScholarlyNews.™ You can expect the information about One-Carbon Group Transferases in this eBook to be deeper than what you can access anywhere else, as well as consistently reliable, authoritative, informed, and relevant. The content of One-Carbon Group Transferases—Advances in Research and Application: 2012 Edition has been produced by the world’s leading scientists, engineers, analysts, research institutions, and companies. All of the content is from peer-reviewed sources, and all of it is written, assembled, and edited by the editors at ScholarlyEditions™ and available exclusively from us. You now have a source you can cite with authority, confidence, and credibility. More information is available at http://www.ScholarlyEditions.com/.

Next Generation Sequencing

Author : Jerzy Kulski
Publisher : BoD – Books on Demand
ISBN 13 : 9535122401
Total Pages : 466 pages
Book Rating : 4.5/5 (351 download)

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Book Synopsis Next Generation Sequencing by : Jerzy Kulski

Download or read book Next Generation Sequencing written by Jerzy Kulski and published by BoD – Books on Demand. This book was released on 2016-01-14 with total page 466 pages. Available in PDF, EPUB and Kindle. Book excerpt: Next generation sequencing (NGS) has surpassed the traditional Sanger sequencing method to become the main choice for large-scale, genome-wide sequencing studies with ultra-high-throughput production and a huge reduction in costs. The NGS technologies have had enormous impact on the studies of structural and functional genomics in all the life sciences. In this book, Next Generation Sequencing Advances, Applications and Challenges, the sixteen chapters written by experts cover various aspects of NGS including genomics, transcriptomics and methylomics, the sequencing platforms, and the bioinformatics challenges in processing and analysing huge amounts of sequencing data. Following an overview of the evolution of NGS in the brave new world of omics, the book examines the advances and challenges of NGS applications in basic and applied research on microorganisms, agricultural plants and humans. This book is of value to all who are interested in DNA sequencing and bioinformatics across all fields of the life sciences.

Fundamentals of Advanced Omics Technologies: From Genes to Metabolites

Author :
Publisher : Newnes
ISBN 13 : 0444626700
Total Pages : 488 pages
Book Rating : 4.4/5 (446 download)

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Book Synopsis Fundamentals of Advanced Omics Technologies: From Genes to Metabolites by :

Download or read book Fundamentals of Advanced Omics Technologies: From Genes to Metabolites written by and published by Newnes. This book was released on 2014-02-14 with total page 488 pages. Available in PDF, EPUB and Kindle. Book excerpt: Fundamentals of Advanced Omics Technologies: From Genes to Metabolites covers the fundamental aspects of the new instrumental and methodological developments in omics technologies, including those related to genomics, transcriptomics, epigenetics, proteomics and metabolomics, as well as other omics approaches such as glycomics, peptidomics and foodomics. The principal applications are presented in the following complementary volume. The chapters discuss in detail omics technologies, DNA microarray analysis, next-generation sequencing technologies, genome-wide analysis of methylation and histone modifications, emerging nanotechniques in proteomics, imaging mass spectrometry in proteomics, recent quantitative proteomics approaches, and advances in high-resolution NMR-based metabolomics, as well as MS-based non-targeted metabolomics and metabolome analysis by CE-MS, global glycomics analyses, foodomics, and high resolution analytical tools for quantitative peptidomics. Key aspects related to chemometrics, bioinformatics, data treatment, data integration and systems biology, deep-sequencing data analysis, statistical approaches for the analysis of microarray data, the integration of transcriptome and metabolome data and computational approaches for visualization and integration of omics data are also covered. - Covers the latest advances in instrumentation, experimental design, sample preparation, and data analysis - Provides thorough explanations and descriptions of specific omics technologies - Describes advanced tools and methodologies for data pretreatment, storage, curation and analysis, as well as data integration

Advances in the Domain of Environmental Biotechnology

Author : Naga Raju Maddela
Publisher : Springer Nature
ISBN 13 : 9811589992
Total Pages : 721 pages
Book Rating : 4.8/5 (115 download)

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Book Synopsis Advances in the Domain of Environmental Biotechnology by : Naga Raju Maddela

Download or read book Advances in the Domain of Environmental Biotechnology written by Naga Raju Maddela and published by Springer Nature. This book was released on 2021-01-04 with total page 721 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book complies latest advancement in the field of environmental biotechnology. It focuses on topics that comprises industrial, environment and agricultural related issues to microbiological studies and exhibits correlation between biological world and dependence of humans on it. It is designed into three sections covering the role of environmental biotechnology in industry, environmental remediation, and agriculture. Ranging from micro-scale studies to macro, it covers up a huge domain of environmental biotechnology. Overall the book portrays the importance of modern biotechnology technologies in solving the problems in modern day life. The book is a ready reference for practicing students, researchers of biotechnology, environmental engineering, chemical engineering and other allied fields likewise.

Advances in Molecular Pathology, E-Book 2021

Author : Gregory J. Tsongalis
Publisher : Elsevier Health Sciences
ISBN 13 : 0323813364
Total Pages : 273 pages
Book Rating : 4.3/5 (238 download)

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Book Synopsis Advances in Molecular Pathology, E-Book 2021 by : Gregory J. Tsongalis

Download or read book Advances in Molecular Pathology, E-Book 2021 written by Gregory J. Tsongalis and published by Elsevier Health Sciences. This book was released on 2021-10-13 with total page 273 pages. Available in PDF, EPUB and Kindle. Book excerpt: Advances in Molecular Pathology is an annual review publication that covers the current practices and latest developments in the field of Molecular Pathology. Each issue is divided into sections for comprehensive coverage of all subspecialty areas within molecular pathology, including, Genetics, Hematopathology, Infectious Disease, Pharmacogenomics, Informatics, Solid Tumors, and special topics on COVID-19. The Editor-in-Chief of the publication is Dr. Gregory Tsongalis, a leading expert in the field. Topics covered this year include but are not limited to: Phenotype Association and Variant Pathogenicity Prediction Tools in Genomic Analysis; The application of noninvasive prenatal screening to detect copy number variations; Next generation cytogenomics using optical mapping; Review of molecular in APL; NGS for MRD in acute leukemia; Review of emerging technologies as they pertain to infectious disease testing; Germline genetic variants that predict drug response; Nutrigenomics; PGx of hypertension; Genomic data for blood typing, specifically both through NGS and arrays; Preanalytic Variables and Tissue Stewardship for Reliable Next-Generation Sequencing (NGS) Clinical Analysis; and Cell-free nucleic acids in cancer: Current approaches, challenges, and future directions.

Advances in Bioinformatics

Author : Vijai Singh
Publisher : Springer Nature
ISBN 13 : 9819984017
Total Pages : 365 pages
Book Rating : 4.8/5 (199 download)

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Book Synopsis Advances in Bioinformatics by : Vijai Singh

Download or read book Advances in Bioinformatics written by Vijai Singh and published by Springer Nature. This book was released on with total page 365 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Advanced Crop Improvement, Volume 1

Author : Aamir Raina
Publisher : Springer Nature
ISBN 13 : 3031281462
Total Pages : 546 pages
Book Rating : 4.0/5 (312 download)

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Book Synopsis Advanced Crop Improvement, Volume 1 by : Aamir Raina

Download or read book Advanced Crop Improvement, Volume 1 written by Aamir Raina and published by Springer Nature. This book was released on 2023-08-01 with total page 546 pages. Available in PDF, EPUB and Kindle. Book excerpt: As per the reports of FAO, the human population will rise to 9 billion by the end of 2050 and 70% of more food must be produced over the next three decades to feed the additional population. The breeding approaches for crop improvement programs are dependent on the availability and accessibility of genetic variation, either spontaneous or induced by the mutagens. Plant breeders, agronomists, and geneticists are under constant pressure to expand food production by employing innovative breeding strategies to enhance yield, adaptability, nutrition, resistance to biotic and abiotic stresses. In conventional breeding approaches, introgression of genes in crop varieties is laborious and time-consuming. Nowadays, new innovative plant breeding techniques such as molecular breeding and plant biotechnology, supplement the traditional breeding approaches to achieve the desired goals of enhanced food production. With the advent of recent molecular tools like genomics, transgenics, molecular marker-assisted back-crossing, TILLING, Eco-TILLING, gene editing, CRISPR CAS, non-targeted protein abundant comparative proteomics, genome wide association studies have made possible mapping of important QTLs, insertion of transgenes, reduction of linkage drags, and manipulation of genome. In general, conventional and modern plant breeding approaches would be strategically ideal for developing new elite crop varieties to meet the feeding requirement of the increasing world population. This book highlights the latest progress in the field of plant breeding, and their applicability in crop improvement. The basic concept of this 2-volume work is to assess the use of modern breeding strategies in supplementing conventional breeding toward the development of elite crop varieties, for obtaining desired goals of food production.

Forensic DNA Typing: Principles, Applications and Advancements

Author : Pankaj Shrivastava
Publisher : Springer Nature
ISBN 13 : 9811566550
Total Pages : 673 pages
Book Rating : 4.8/5 (115 download)

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Book Synopsis Forensic DNA Typing: Principles, Applications and Advancements by : Pankaj Shrivastava

Download or read book Forensic DNA Typing: Principles, Applications and Advancements written by Pankaj Shrivastava and published by Springer Nature. This book was released on 2020-12-11 with total page 673 pages. Available in PDF, EPUB and Kindle. Book excerpt: The book explores the fundamental principles, advances in forensic techniques, and its application on forensic DNA analysis. The book is divided into three modules; the first module provides the historical prospect of forensic DNA typing and introduces fundamentals of forensic DNA typing, methodology, and technical advancements, application of STRs, and DNA databases for forensic DNA profile analysis. Module 2 examines the problems and challenges encountered in extracting DNA and generating DNA profiles. It provides information on the methods and the best practices for DNA isolation from forensic biological samples and human remains like ancient DNA, DNA typing of skeletal remains and disaster victim identification, the importance of DNA typing in human trafficking, and various problems associated with capillary electrophoresis. Module 3 emphasizes various technologies that are based on SNPs, STRs namely Y-STR, X-STR, mitochondrial DNA profiling in forensic science. Module 4 explores the application of non-human forensic DNA typing of domestic animals, wildlife forensics, plant DNA fingerprinting, and microbial forensics. The last module discusses new areas and alternative methods in forensic DNA typing, including Next-Generation Sequencing, and its utility in forensic science, oral microbes, and forensic DNA phenotyping. Given its scope, the book is a useful resource in the field of DNA fingerprinting for scientists, forensic experts, and students at the postgraduate level.

Cancer Genomics

Author : Hye-Jung E. Chun
Publisher : Elsevier Inc. Chapters
ISBN 13 : 0128060999
Total Pages : 48 pages
Book Rating : 4.1/5 (28 download)

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Book Synopsis Cancer Genomics by : Hye-Jung E. Chun

Download or read book Cancer Genomics written by Hye-Jung E. Chun and published by Elsevier Inc. Chapters. This book was released on 2013-11-21 with total page 48 pages. Available in PDF, EPUB and Kindle. Book excerpt: Cancer results from accumulated mutations in the genome. Sequencing is an accurate method to detect mutations. Second-generation sequencing technology, commonly referred to as next-generation sequencing technology, enables rapid, efficient and affordable DNA sequencing, and is transforming the scale and scope of cancer research. The technology is sufficiently flexible and affordable to allow sequencing of many cancer genomes, and thus facilitates both sequencing of samples from large patient cohorts and during disease progression in individual cancer patients. The high depths of redundant sequence coverage that can be obtained using some second-generation sequencing technologies, along with sequencing reads amplified from single DNA molecules, facilitate detection of subclones of cells in tumors. Large-scale genome sequencing of hundreds or even thousands of cancer samples is being conducted by several groups that aim to identify and characterize cancer driver mutations. Goals of such work, previously infeasible with Sanger sequencing instruments, are to use this information to improve cancer prognosis, diagnosis and therapeutic decision-making. The speed of data analysis is rate limiting, and investigators are struggling to accommodate and interpret the data deluge produced by second-generation technologies. In this chapter, we discuss cancer properties that are revealed by sequencing and the implication of such properties in experimental design and data interpretation. We describe past, current and upcoming sequencing technologies and the application of second-generation sequencing technologies in cancer genomics. Finally, we discuss the impact of second-generation sequencing technology in shaping personalized medicine.

Algorithms for Next-Generation Sequencing

Author : Wing-Kin Sung
Publisher : CRC Press
ISBN 13 : 1498752985
Total Pages : 258 pages
Book Rating : 4.4/5 (987 download)

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Book Synopsis Algorithms for Next-Generation Sequencing by : Wing-Kin Sung

Download or read book Algorithms for Next-Generation Sequencing written by Wing-Kin Sung and published by CRC Press. This book was released on 2017-05-18 with total page 258 pages. Available in PDF, EPUB and Kindle. Book excerpt: Advances in sequencing technology have allowed scientists to study the human genome in greater depth and on a larger scale than ever before – as many as hundreds of millions of short reads in the course of a few days. But what are the best ways to deal with this flood of data? Algorithms for Next-Generation Sequencing is an invaluable tool for students and researchers in bioinformatics and computational biology, biologists seeking to process and manage the data generated by next-generation sequencing, and as a textbook or a self-study resource. In addition to offering an in-depth description of the algorithms for processing sequencing data, it also presents useful case studies describing the applications of this technology.