A Population Model for Coho Salmon (Onchorhynchus Kisutch) in Freshwater Creek

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Total Pages : 136 pages
Book Rating : 4.:/5 (116 download)

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Book Synopsis A Population Model for Coho Salmon (Onchorhynchus Kisutch) in Freshwater Creek by : Gabriel Scheer

Download or read book A Population Model for Coho Salmon (Onchorhynchus Kisutch) in Freshwater Creek written by Gabriel Scheer and published by . This book was released on 2017 with total page 136 pages. Available in PDF, EPUB and Kindle. Book excerpt: Historic land use practices and associated habitat degradation have led to significant declines in coho salmon (Oncorhynchus kisutch ) populations across their range. In California they are a state and federally listed species, requiring population monitoring and management plans tailored towards recovery. Traditionally, juvenile coho salmon in California were thought to spend approximately one year in their natal freshwater habitats before migrating to sea the following spring and summer as smolts. However, recent work has documented considerable variation in juvenile life history and migration timing. Specifically, juveniles that migrate downstream prior to one year of age and spend their winter rearing in estuary habitat have been shown to produce significant adult returns. Using 14 years of life-stage-specific survival and movement data collected on Freshwater Creek in northern California, I constructed a habitat-base life cycle model to evaluate expected population response to restoration actions, and to incorporate life history diversity into population projections. This modeling effort is divided into three sections: (1) parameterize stage specific survival rates and probability of expressing an early emigrant life history; (2) conduct sensitivity analysis to quantify which life stages are most influential in determining population status; (3) use stochastic simulations to quantitatively evaluate how population dynamics and extinction risk are affected by inclusion of life history diversity and alternative restoration scenarios. The resulting analyses showed that, across locations and years, between 3-29% of juvenile coho are early migrants to the stream estuary ecotone during their first winter. The majority of early migrants originated in the main-stem reaches lower in the watershed. Subsequent sensitivity analysis identified marine survival and smolt emigrant overwinter survival as highly influential in the long-term trends for this population. While the proportion of individuals expressing an 'early emigrant' life history variant is significant, this strategy showed low sensitivity relative to other life stages in defining long-term population growth under this modeling construct. In contrast, 50-year population simulations showed significant gains in adult escapement up to 43% when early emigrant life histories were included. This suggests that while alternative life history variants may not be the single greatest driver of population growth, their exclusion in management models may constitute a significant oversight in population management. Additionally, the probability of local population extinction was reduced substantially from 36% to 8% with the incorporation of life history diversity in the modeling structure. Historic coho salmon rearing habitats have been vastly diminished during the last 100 years in both stream and estuary areas. This modeling approach can help to identify sites to focus habitat restoration where it can strengthen individual populations' long-term growth or abilities to persist in the face of environmental stochasticity.

A Time- and State-based Approach to Estimate Winter Movement and Survival of Juvenile Coho Salmon (Oncorhynchus Kisutch) in Freshwater Creek, California

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Total Pages : 101 pages
Book Rating : 4.:/5 (112 download)

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Book Synopsis A Time- and State-based Approach to Estimate Winter Movement and Survival of Juvenile Coho Salmon (Oncorhynchus Kisutch) in Freshwater Creek, California by : Nicholas Van Vleet

Download or read book A Time- and State-based Approach to Estimate Winter Movement and Survival of Juvenile Coho Salmon (Oncorhynchus Kisutch) in Freshwater Creek, California written by Nicholas Van Vleet and published by . This book was released on 2019 with total page 101 pages. Available in PDF, EPUB and Kindle. Book excerpt: Accounting for life history diversity and overwinter survival of juvenile Coho Salmon is important to inform restoration and recovery efforts for this threatened species. Multiple seaward migration patterns of Coho Salmon have been identified, including spring fry migrants, fall and winter parr migrants, and spring smolt migrants. Previous studies have indicated that spring smolt migrants have low overwinter survival rates while they are rearing in upstream habitats, suggesting that freshwater overwinter survival may be one factor that limits smolt production. However, previous research did not account for the early emigration of fall and winter parr migrants from the study area, which most likely negatively biased their overwinter survival estimates. Furthermore, previous mark-recapture methods aggregated continuous detection data into course seasonal scales in order to estimate movement and survival. In an effort to refine previous methodology, I developed a multi-state model that allowed for estimation of early emigration and survival rates in space and time by having weekly time-varying occasions paired with discrete spatial states.

Overwinter Survival and Growth of Juvenile Coho Salmon, Oncorhynchus Kisutch, in Freshwater Creek, California

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Total Pages : 152 pages
Book Rating : 4.:/5 (865 download)

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Book Synopsis Overwinter Survival and Growth of Juvenile Coho Salmon, Oncorhynchus Kisutch, in Freshwater Creek, California by : Jennifer J. Hauer

Download or read book Overwinter Survival and Growth of Juvenile Coho Salmon, Oncorhynchus Kisutch, in Freshwater Creek, California written by Jennifer J. Hauer and published by . This book was released on 2013 with total page 152 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Selection of Spawning Sites by Coho Salmon (Oncorhynchus Kisutch) in Freshwater Creek, California

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ISBN 13 :
Total Pages : 96 pages
Book Rating : 4.:/5 (685 download)

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Book Synopsis Selection of Spawning Sites by Coho Salmon (Oncorhynchus Kisutch) in Freshwater Creek, California by : Kristin E. Mull

Download or read book Selection of Spawning Sites by Coho Salmon (Oncorhynchus Kisutch) in Freshwater Creek, California written by Kristin E. Mull and published by . This book was released on 2005 with total page 96 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Physical and Chemical Conditions in Coho Salmon (Oncorhynchus Kisutch) Spawning Habitat in Freshwater Creek, Northern California

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ISBN 13 :
Total Pages : 232 pages
Book Rating : 4.:/5 (267 download)

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Book Synopsis Physical and Chemical Conditions in Coho Salmon (Oncorhynchus Kisutch) Spawning Habitat in Freshwater Creek, Northern California by : Keith Barnard

Download or read book Physical and Chemical Conditions in Coho Salmon (Oncorhynchus Kisutch) Spawning Habitat in Freshwater Creek, Northern California written by Keith Barnard and published by . This book was released on 1992 with total page 232 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Comparing Environmental DNA and Traditional Monitoring Approaches to Assess the Abundance of Outmigrating Coho Salmon (Oncorhynchus Kisutch) in California Coastal Streams

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Total Pages : 54 pages
Book Rating : 4.:/5 (122 download)

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Book Synopsis Comparing Environmental DNA and Traditional Monitoring Approaches to Assess the Abundance of Outmigrating Coho Salmon (Oncorhynchus Kisutch) in California Coastal Streams by : Emerson Kanawi

Download or read book Comparing Environmental DNA and Traditional Monitoring Approaches to Assess the Abundance of Outmigrating Coho Salmon (Oncorhynchus Kisutch) in California Coastal Streams written by Emerson Kanawi and published by . This book was released on 2020 with total page 54 pages. Available in PDF, EPUB and Kindle. Book excerpt: Environmental DNA (eDNA) has the potential to dramatically increase the information available to managers regarding species distribution and abundance. Collection of reliable survey information on fish abundance is essential to monitor population trends and restoration efforts for endangered and threatened species. In Northern California, coho salmon are a federally listed species and a focus of ongoing monitoring programs and restoration projects. I examined the feasibility of using eDNA to supplement, or replace, traditional outmigrating juvenile coho salmon monitoring approaches currently used at two existing coho salmon life-cycle monitoring stations. Over the spring of 2018 and spring of 2019, I collected water samples, water quality, and flow information during the coho salmon smolt migration season at cross-sections of two creeks in Northern Humboldt County, California concurrently with daily downstream migrant trapping. In addition, I compared differences in the amount of eDNA filtered from water samples collected and filtered through multiple filter sizes and material. Extracted DNA was amplified using qPCR and a species-specific assay. Results of model selection using weekly and daily abundance estimates and Flow Corrected eDNA indicate high variability of eDNA concentration both within sites and between sites for each creek. The best-fit models did not include Flow Corrected eDNA; a measure of eDNA concentration adjusted for stream flow. However, when using Flow Corrected eDNA values to generate an additional measure of abundance, Area Under the Curve (AUC), the predictive ability of the models increased significantly on both Prairie and Freshwater Creek. A linear regression resulted in a significant positive relationship that explained 71% of the variation between AUC and the downstream migrant coho salmon estimates on Prairie Creek and 88% of the variation in Freshwater Creek in 2018. Additionally, there was a significant relationship between AUC and the downstream migrant coho salmon estimates in 2019 for only one of the filter sizes tested. These results imply that this approach shows promise for elucidating relationships between eDNA and juvenile coho abundances, but more research is necessary to determine what sampling methods, and analytical approaches, to use in these small lotic systems.

Overwinter Survival and Redistribution of Juvenile Coho Salmon, Oncorhynchus Kisutch, in Prairie Creek, California

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Total Pages : 120 pages
Book Rating : 4.:/5 (885 download)

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Book Synopsis Overwinter Survival and Redistribution of Juvenile Coho Salmon, Oncorhynchus Kisutch, in Prairie Creek, California by : Tancy R. Moore

Download or read book Overwinter Survival and Redistribution of Juvenile Coho Salmon, Oncorhynchus Kisutch, in Prairie Creek, California written by Tancy R. Moore and published by . This book was released on 2014 with total page 120 pages. Available in PDF, EPUB and Kindle. Book excerpt: During the summer of 2012, juvenile coho salmon (Oncorhynchus kisutch) in Prairie Creek, California and its tributaries were marked using PIT tags to monitor winter redistribution and estimate overwinter growth and survival. Since a substantial number of juvenile coho salmon in the Prairie Creek watershed may rear in freshwater for two years, a scale sample analysis was also conducted to determine what proportion of the 2012 population was exhibiting a two-year freshwater residency. The Cormack-Jolly-Seber model and Program MARK were used to examine how rearing location, size at tagging, habitat unit depth, and volume of large woody debris affected overwinter survival. I found that 98.6% of juveniles in 2012 were age 0, and apparent overwinter survival was 39.4%. On average, juveniles experienced a 0.13% increase in length per day and 0.35% increase in weight per day, with the smallest fish experiencing the highest growth rates. Fish that were larger in fall and tagged closer to the confluence of Prairie Creek had higher apparent overwinter survival, but habitat depth and quantity of large woody debris did not appear to impact survival probability. Large juveniles appeared to have low survival near the confluence of Prairie Creek; however, the model could not distinguish deaths from emigration, meaning the high mortality rate for large juveniles near the mouth may actually reflect a pattern of early emigration from the study area. Since juveniles that migrate to sea prior to spring trapping are typically treated as mortalities, these results have important implications for the way managers estimate freshwater survival for coho salmon.

A Landscape Approach to Determining and Predicting Juvenile Coho Salmon (Oncorhynchus Kisutch) Movement Timing and Growth Patterns Prior to Ocean Entry

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ISBN 13 :
Total Pages : 124 pages
Book Rating : 4.:/5 (11 download)

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Book Synopsis A Landscape Approach to Determining and Predicting Juvenile Coho Salmon (Oncorhynchus Kisutch) Movement Timing and Growth Patterns Prior to Ocean Entry by :

Download or read book A Landscape Approach to Determining and Predicting Juvenile Coho Salmon (Oncorhynchus Kisutch) Movement Timing and Growth Patterns Prior to Ocean Entry written by and published by . This book was released on 2016 with total page 124 pages. Available in PDF, EPUB and Kindle. Book excerpt: Coho salmon (Oncorhynchus kisutch) rely on unique habitats during the winter season, which may dictate how much individuals may growth and when migration from freshwater rearing habitat to the ocean occurs. Here I analyze movement timing and growth patterns for coho salmon through a field-based study and a literature review. For the field portion, I examined hatchery-stocked juvenile coho salmon across four stream basins in the Russian River watershed, California to determine the relative importance of climate, landscape, and fish size metrics in predicting movement and growth patterns over a winter rearing and spring smolt outmigration time period (December 2014-June 2015). I observed three unique movement strategies: winter parr movement, spring smolt movement, and inter-tributary movement. Movement was predicted in relation to daily temperature and precipitation, followed by in-stream and upslope basin conditions in random forest modeling. Specifically, fish that moved later were associated with basins that contained higher productivity and low-gradient floodplain habitats, while fish that moved earlier came from streams that lacked invertebrate prey and had limited low-gradient rearing habitat. Fish size and timing of movement were the primary predictors of growth, with relatively larger fish in the spring growing faster than fish that were relatively smaller prior to winter. These relationships suggest that hatchery-release fish are still highly influenced by environmental conditions once released, especially in terms of initial seasonal movement, and that watershed conditions should be considered when utilizing hatchery-rearing programs to supplement wild fish populations. In North America, coho salmon populations are distributed from Alaska through California, and may exhibit unique movement and growth patterns in relationship to population-scale vulnerability (Endangered Species Act listing), basin area, and availability and types of rearing habitat. For the second part of my thesis, I conducted a literature review to assess what factors are commonly considered in predicting movement and growth patterns for these fish, as well as the types (season and life stage) and number of movement strategies reported. Eighteen studies were summarized, of which sixteen identified unique movement strategies, ranging from one to four. Despite a wide range of basin areas and latitudes, winter parr and spring smolt movements were commonly observed, with authors primarily relating these behaviors to in-stream habitat and fish size metrics. Additionally, growth was linked positively and primarily with off-channel winter rearing, which may outweigh the importance of fish size in predicting growth when high quality rearing habitats are available during the winter season. Recognizing movement timing diversity and its drivers can help recover threatened coho salmon populations. More widely distributed populations may have unique phenotypic expressions based on localized genetic and environmental interactions, increasing diversity and overall stability across the population, a concept known as the portfolio effect. Understanding fish-habitat relationships can aid recovery efforts by providing a framework of climatic and watershed conditions that support unique behaviors, even in already severely limited populations.

Effect of Rearing Location on Escapement of Coho Salmon (Oncorhynchus Kisutch) at Freshwater Creek, California

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Total Pages : 82 pages
Book Rating : 4.:/5 (32 download)

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Book Synopsis Effect of Rearing Location on Escapement of Coho Salmon (Oncorhynchus Kisutch) at Freshwater Creek, California by : Barbara L. McCoy

Download or read book Effect of Rearing Location on Escapement of Coho Salmon (Oncorhynchus Kisutch) at Freshwater Creek, California written by Barbara L. McCoy and published by . This book was released on 2008 with total page 82 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Genetic Variability in Hatchery and Wild Populations of Coho Salmon Oncorhynchus Kisutch in Oregon

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Total Pages : 176 pages
Book Rating : 4.:/5 (18 download)

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Book Synopsis Genetic Variability in Hatchery and Wild Populations of Coho Salmon Oncorhynchus Kisutch in Oregon by : Paul Gordon Olin

Download or read book Genetic Variability in Hatchery and Wild Populations of Coho Salmon Oncorhynchus Kisutch in Oregon written by Paul Gordon Olin and published by . This book was released on 1984 with total page 176 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Behavior and Survival of Coho Salmon, Oncorhynchus Kisutch (Walbaum), in Sashin Creek, Southeastern Alaska

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ISBN 13 :
Total Pages : 158 pages
Book Rating : 4.:/5 (111 download)

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Book Synopsis Behavior and Survival of Coho Salmon, Oncorhynchus Kisutch (Walbaum), in Sashin Creek, Southeastern Alaska by : Richard Allan Crone

Download or read book Behavior and Survival of Coho Salmon, Oncorhynchus Kisutch (Walbaum), in Sashin Creek, Southeastern Alaska written by Richard Allan Crone and published by . This book was released on 1968 with total page 158 pages. Available in PDF, EPUB and Kindle. Book excerpt: Behavior and survival in fresh water were studied for three brood years of coho salmon in Sashin Creek, Alaska, from October 1963, until September 1966. Investigations of spawning adults were conducted to determine numbers of spawners, distribution on the spawning grounds, effects on pink salmon, age composition, redd life, fecundities, and egg retention. Juvenile coho were studied to determine changes in population size, distribution in the stream, age composition of the population, food habits, and rates of mortality during fresh-water life. The number of coho spawners counted into Sashin Creek each year normally varied from 50 to 300. Weir counts and estimations of the number of spawners determined from observed spawning effort and redd life were not accurate methods of estimating the coho escapement into Sashin Creek. In 1965, a more accurate estimate was obtained by tagging a portion of the run and recording marked to unmarked ratios on the spawning grounds. I estimated that less than two percent of the viable pink salmon embryos were destroyed in 1965 by the spawning activities of coho salmon. Most coho spawners returned to Sashin Creek in 1965 and 1966 in their fourth year of life after having migrated to sea in their third year (designated 43). Smaller numbers of 32 and 54 individuals composed the remainder of the spawning population. The mean redd life of 56 females was 13 days. A small sample of coho from Sashin Creek examined for fecundity in 1966 gave a mean of 2,868 eggs per female. A weir or fyke net was fished in the spring to estimate emigration of juvenile coho. Coho smolts left Sashin Creek from April through July; peak emigration occurred in late May or early June. Coho fry left the stream in the spring and summer in widely varying numbers from year to year. I estimated from growth data, population estimates, and analysis of scale samples that most coho juveniles remained in Sashin Creek for two growing seasons before migrating to sea. Analysis of scales from juvenile coho indicated that some reabsorption of scales occurs during the winter. The possibility of reabsorption of circuli makes back-calculation of the length of younger age-groups of coho from scale measurements unreliable. Diptera were represented more often than any other order of insects in the stomachs of juvenile coho. Hemiptera were important as food items to juvenile coho in a tributary stream. The estimated survival from egg deposition to immediately prior to emergence varied between 17.5 and. 34.9 percent for the three brood years, and averaged 27. 8 percent. Early summer populations of fry were variable in size and dependent on the size of the egg deposition of the brood. Populations of fry declined rapidly during July and early August. Instantaneous mortality rates were much higher for this period than during any other time in the fresh-water life of coho salmon in Sashin Creek. Mortality dropped to a low level during the following winter period.

Freshwater and Marine Survival of Coho Salmon (Oncorhynchus Kisutch) as a Function of Juvenile Life History

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Total Pages : 77 pages
Book Rating : 4.:/5 (112 download)

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Book Synopsis Freshwater and Marine Survival of Coho Salmon (Oncorhynchus Kisutch) as a Function of Juvenile Life History by : Grace Katherine Ghrist

Download or read book Freshwater and Marine Survival of Coho Salmon (Oncorhynchus Kisutch) as a Function of Juvenile Life History written by Grace Katherine Ghrist and published by . This book was released on 2019 with total page 77 pages. Available in PDF, EPUB and Kindle. Book excerpt: Overwinter survival for all three cohorts and all life histories ranged from 25-73%. In cohort one, overwinter survival for spring migrants was greater than the early migrants: overwinter survival was between 38-53% for spring migrants (depending on analysis assumptions) compared to 26% for early migrants; overwinter survival for the two life histories was indistinguishable in the other two cohorts. Apparent marine survival, including all cohorts and life histories ranged from 1.6-4.9%. Marine survival was indistinguishable between juvenile life history strategies likely due to small sample sizes. A power analysis performed with simulated data, to estimate the sample size of fall tags necessary in order to distinguish between juvenile life histories; this ranged from 3500-6000 tags. The transition probability to the jack state ranged from 1.5-55.8% and was indistinguishable between life history strategies. Multistate models provide the opportunity to incorporate life history diversity into estimates of population demographic rates. Use of these models and ongoing monitoring effort will continue to add new insights into Coho Salmon life history variation and the consequences for populations.

Historical and Current Presence-absence of Coho Salmon (Oncorhynchus Kisutch) in the Central California Coast Evolutionary Significant Unit

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Total Pages : 36 pages
Book Rating : 4.3/5 (121 download)

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Book Synopsis Historical and Current Presence-absence of Coho Salmon (Oncorhynchus Kisutch) in the Central California Coast Evolutionary Significant Unit by : Peter Burton Adams

Download or read book Historical and Current Presence-absence of Coho Salmon (Oncorhynchus Kisutch) in the Central California Coast Evolutionary Significant Unit written by Peter Burton Adams and published by . This book was released on 1999 with total page 36 pages. Available in PDF, EPUB and Kindle. Book excerpt: "This report is a summary of the presence and absence of coho salmon, Oncorhynchus kisutch, in streams in the Central California Coast Evolutionary Significant Unit (ESU). Only streams with historical records of coho occupancy are considered. It has been prepared to assist in Endangered Species Act activities... Presence absence data used here come from surveys conducted for this study and fron data collected by other researchers. A preliminary report of this data, which included only approximately one-half of these streams, was published earlier... to meet earlier listing requirements."--p.Abstract.

Predictions of Coho Salmon (Oncorhynchus Kisutch) Population Abundance in the Clearwater River, Washington Using Various Habitat-rating Scenarios of the Ecosystem Diagnosis and Treatment Model

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Book Rating : 4.:/5 (999 download)

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Book Synopsis Predictions of Coho Salmon (Oncorhynchus Kisutch) Population Abundance in the Clearwater River, Washington Using Various Habitat-rating Scenarios of the Ecosystem Diagnosis and Treatment Model by : Lawrence G. Dominguez

Download or read book Predictions of Coho Salmon (Oncorhynchus Kisutch) Population Abundance in the Clearwater River, Washington Using Various Habitat-rating Scenarios of the Ecosystem Diagnosis and Treatment Model written by Lawrence G. Dominguez and published by . This book was released on 2006 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:

Evaluation of Marine and Freshwater Growth and Survival of Auke Creek Coho Salmon

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ISBN 13 :
Total Pages : 78 pages
Book Rating : 4.:/5 (111 download)

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Book Synopsis Evaluation of Marine and Freshwater Growth and Survival of Auke Creek Coho Salmon by : Joshua R. Russell

Download or read book Evaluation of Marine and Freshwater Growth and Survival of Auke Creek Coho Salmon written by Joshua R. Russell and published by . This book was released on 2019 with total page 78 pages. Available in PDF, EPUB and Kindle. Book excerpt: Coho Salmon (Oncorhynchus kisutch) are a species of great social and economic importance for commercial, sport, personal-use, and traditional harvest. We explored factors influencing Auke Creek Coho Salmon smolt production, growth, and marine survival. We analyzed 35 years (1980-2014) of data collected at the Auke Creek Research Station weir in Juneau, Alaska. This extensive data series allowed for an analysis of Auke Creek Coho Salmon growth and survival that is not possible elsewhere. Creek flow best explained variation in smolt-per-adult production. Analysis of freshwater and saltwater scale growth zones failed to identify a specific growth zone with a significant influence on marine survival. Marine survival had a positive relationship with the magnitude of regional hatchery releases and the Pacific Decadal Oscillation. Changes in climate and hatchery production could have negative effects on survival of Auke Creek Coho Salmon, as evidenced by low returns in recent years associated with anomalously high temperatures in the Gulf of Alaska. The impact of climate change and increased hatchery production should be considered in future management decisions.

Viability of Coho Salmon Oncorhynchus Kisutch in Relation to Streamflow Regulation in Terrell Creek, Washington

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ISBN 13 :
Total Pages : 166 pages
Book Rating : 4.:/5 (653 download)

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Book Synopsis Viability of Coho Salmon Oncorhynchus Kisutch in Relation to Streamflow Regulation in Terrell Creek, Washington by : Ryan S. Vasak

Download or read book Viability of Coho Salmon Oncorhynchus Kisutch in Relation to Streamflow Regulation in Terrell Creek, Washington written by Ryan S. Vasak and published by . This book was released on 2010 with total page 166 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Habitat Suitability Index Models

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ISBN 13 :
Total Pages : 40 pages
Book Rating : 4.:/5 (359 download)

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Book Synopsis Habitat Suitability Index Models by : Thomas E. McMahon

Download or read book Habitat Suitability Index Models written by Thomas E. McMahon and published by . This book was released on 1983 with total page 40 pages. Available in PDF, EPUB and Kindle. Book excerpt: